ID:dsi_27494 |
Coordinate:3l:7245227-7245312 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -15.6 | -15.5 | -15.1 |
 |
 |
 |
intergenic
No Repeatable elements found
|
TCGGTCGTCCTTCTGCGGGGGTAAAAGTTAAAGGGGAAACCCCTTTTCAAGTATGCATTATGTCATTAGCATGTTGGCCAATATAAAGGGCCAAACTTTGTTGAATTCGGTGCCGTTTTTTTTTTTTTCTTGCCAGGAATGACAGCTGTCTCCTGTCTTTTGTTCGAGTTGCGATGACGAAACGTA
**************************************************....((((..((...((((((..((((((.........))))))....))))))...)))))).......................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| ................................................................................ATATAAAGGGCCAAA........................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................................................................GTTCGAGTCGCGATGACCCA..... | 20 | 3 | 3 | 0.33 | 1 | 0 | 1 | 0 |
| .......................................................................................................................................................CCTGTCCTTTGTACGAG.................. | 17 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 |
| ............................................................TGTCATTAGCTAGTTGGC............................................................................................................ | 18 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 |
| .........................................................................................................TTCCGTGCCGTTTTTT................................................................. | 16 | 1 | 10 | 0.10 | 1 | 0 | 1 | 0 |
| .......................................................................................................AACTCCGTTCCGTTTTTTTTTT............................................................. | 22 | 3 | 13 | 0.08 | 1 | 0 | 0 | 1 |
| .......................................................................................................CCTTCGGGGCCGTTTTTTTT............................................................... | 20 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 |
|
AGCCAGCAGGAAGACGCCCCCATTTTCAATTTCCCCTTTGGGGAAAAGTTCATACGTAATACAGTAATCGTACAACCGGTTATATTTCCCGGTTTGAAACAACTTAAGCCACGGCAAAAAAAAAAAAAGAACGGTCCTTACTGTCGACAGAGGACAGAAAACAAGCTCAACGCTACTGCTTTGCAT
**************************************************....((((..((...((((((..((((((.........))))))....))))))...)))))).......................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902008 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ........................................GGGAAAACTTCATTCGGAATA............................................................................................................................. | 21 | 3 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 |
| .......................................................................................................................AAAAAAAAAGCACGGGCCT................................................ | 19 | 2 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 |
| ...................................................................................................................AAAAAAAAAAAAAGGGCGGGCCT................................................ | 23 | 3 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................................AAAAAAAAGAACGGTGCAAACT............................................ | 22 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 |
| ...................................................................................................................AAAAAAAAAAAAAGGCTGGTCCT................................................ | 23 | 3 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................................................AAAAAAGAACGGCCTGTACT............................................ | 20 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................AAAAAAAAAAAAGAGCTGGCCT................................................ | 22 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
Generated: 04/24/2015 at 01:54 AM