ID:dsi_27487 |
Coordinate:2r:5771900-5772049 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
TCATTAATTGTCTTGATTTCGCCATAAGGCCATCTCAGCATAATGCAAATGTAGTAAATAACAAGTTATGTAAAATTTAAATGCGGCTTAAACTTGCACTCCCAAACATTTTGCTGACCCAACATAAAATTGTTTTCGATAAATTTTTAAATGGCCTAGAACCGCCGACTGAGAAAACCCAATCTGTTTGCCATCCTCAGAGCGCAAGAAGCGCACCTGCAACACCGCCATGCTGAGCAGCTCCTCCACC
**************************************************...(((((((....((((.(((((((.........((........))..........)))))))))))..((((......)))).........((((((..((((........))))..)))))).........))))))).........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O001 Testis |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................ATCTGTTTGCCATCGTCA................................................... | 18 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..................................................................................................................................................................................................................................GCCATGCTGAGCAGCTCCTCCAC. | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................AAGGCCAGCTCAGCA.................................................................................................................................................................................................................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 |
|
AGTAATTAACAGAACTAAAGCGGTATTCCGGTAGAGTCGTATTACGTTTACATCATTTATTGTTCAATACATTTTAAATTTACGCCGAATTTGAACGTGAGGGTTTGTAAAACGACTGGGTTGTATTTTAACAAAAGCTATTTAAAAATTTACCGGATCTTGGCGGCTGACTCTTTTGGGTTAGACAAACGGTAGGAGTCTCGCGTTCTTCGCGTGGACGTTGTGGCGGTACGACTCGTCGAGGAGGTGG
**************************************************...(((((((....((((.(((((((.........((........))..........)))))))))))..((((......)))).........((((((..((((........))))..)))))).........))))))).........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
GSM343915 embryo |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
M023 head |
M053 female body |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................AGGGGTTGTAAAAAGACTTGGT................................................................................................................................. | 22 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................TCGCGCGCACGTTGTGGCGG..................... | 20 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................ATGACTGGGTTGGATTTT......................................................................................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................TAGAGTCGTAGTACG............................................................................................................................................................................................................ | 15 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................GCGGCTGACTCTAGTGG....................................................................... | 17 | 2 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................TCCGGTAGGGTCATATT............................................................................................................................................................................................................... | 17 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................TGGCGGCTGACGTTTTTG........................................................................ | 18 | 2 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................TTTGAAATTTACCAGATCTT......................................................................................... | 20 | 3 | 20 | 0.10 | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 0 |
| ............................................................................................................................................................ATCTTGGCGGCAGACA.............................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 09:51 PM