ID:

dsi_27478

 Coordinate:

3r:15278399-15278548 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.8 -29.6 -29.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGATCTAAGGCCCCAACATCTAGATATAAGAAACATAAAGAGATTGGTGTACAAGAATGCGGTCAGTAGAATCTGGGCTAACGGCGGTGGAGCGTGACATTTTGTTGCATTTTAATTGCAACTTTGTGTATAGATTTTAATTGCCATAATTATGTAAATGTCGGTCTGTTCTTGGCACGGCCACACGGCG
**************************************************.....(((((((.(((...((.((((..(((.................)))..)))).))...))).)).))))).(((((((((.(((.((....))..)))...((((...((((((.......))))))...)))).))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
.........................................................................................................................................................................................................................ATGTCGGTCTGTTCTTGGCACG........... 22 0 1 2.00 2 2 0 0 0 0 0 0
........................................................................................................................................................................................................................AATGTCGGTCTGTTCTTGGCAC............ 22 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGTAAATGTCGGTCTGT..................... 18 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................GTACAAGAATGCGGTCAGTAGA........................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................TCAGTAGAATCTGGGCTAACGG.......................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
...CGGACGAGGGCATTGTCATCGAC................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
.GTCGGACGAGGGCATTGTCATCGG................................................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..............ATTGTCATCGACTACAAGGGG....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
.........................CTACAAGGAGGAGCGCAAGA............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0
.GTCGGACGAGGGCATTGTCATCGA................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
........GAGGGCATTGTCATCGACTACAAGGA........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0
.....................TCAGGTACAAGGAGGAGCGCA................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 1 0 0 0
.............................................................................................................................................................................TATTGCAACTTTTTCTATAGAT....................................................... 22 3 4 0.25 1 0 0 1 0 0 0 0
...................................................................................................................................................................................TACTTTGTGTATAACTTTTAAT................................................. 22 3 6 0.17 1 0 0 0 0 0 0 1
...........................................GAAAAAGTTGGGTGAT............................................................................................................................................................................................... 16 1 7 0.14 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TGTGAATTTCGGTCTGATCT.................. 20 3 9 0.11 1 0 0 0 0 0 1 0
..............................................................................................TTAAAGAGATTGGTGAAC.......................................................................................................................................... 18 2 10 0.10 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................TGTATATATTTTAATTCTCATA.......................................... 22 3 18 0.06 1 0 0 0 0 0 1 0
...............................................AAGGTGTGTGGTTCGA........................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0
.................................................................................................................................................................................................ATTTTAGTTGCCATCATT....................................... 18 2 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

GCAGCCTGCTCCCGTAACAGTAGCTGATGTTCCTCCTCGCGTTCTTTTTCCACCCACTAAGCTAGATTCCGGGGTTGTAGATCTATATTCTTTGTATTTCTCTAACCACATGTTCTTACGCCAGTCATCTTAGACCCGATTGCCGCCACCTCGCACTGTAAAACAACGTAAAATTAACGTTGAAACACATATCTAAAATTAACGGTATTAATACATTTACAGCCAGACAAGAACCGTGCCGGTGTGCCGC
**************************************************.....(((((((.(((...((.((((..(((.................)))..)))).))...))).)).))))).(((((((((.(((.((....))..)))...((((...((((((.......))))))...)))).))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR1275483
Male prepupae		 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR1275485
Male prepupae
..............................................................GAGTTTCCGGGGTTGTCGATC....................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0
...............................................................AGTTTCCGGGGTTGCCGATC....................................................................................................................................................................... 20 3 3 0.67 2 2 0 0 0 0 0
............................................................................................................................................TGACGCCACCTCGCA............................................................................................... 15 1 8 0.38 3 0 3 0 0 0 0
.........................................................................................................................CAGTCCTCTTAGATCCAAT.............................................................................................................. 19 3 4 0.25 1 0 0 1 0 0 0
................................................................................................................................................................................................................................AGATAAGAACCGTGC........... 15 1 5 0.20 1 0 0 0 0 1 0
.........................................................................................................................................................GACTAGAAAACAACGTAAAAT............................................................................ 21 3 18 0.11 2 0 1 0 1 0 0
..........................................................................................................................AGTCCTCTTAGATCCAATT............................................................................................................. 19 3 10 0.10 1 0 0 0 0 0 1
...........................................................................................................................................................................................................................CAGCCGGACTAGAACCG.............. 17 2 15 0.07 1 0 0 0 1 0 0
..............TAACGGTAGCTGATG............................................................................................................................................................................................................................. 15 1 17 0.06 1 0 0 0 1 0 0
.........................................................................................................................CAGTCCTCTTAGATCCAA............................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0
.................CAGTAGCTGGTGCTCCTC....................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15278349-15278598 - dsi_27478 CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGA-------TCTAAG-GCCCC-A-----------------------A---------------------C--------------ATCTAG----------------------------ATA-----------TAAGAAACATA-----------------------------AAG-------------AGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GTA---GAAT-------------C-TGG-GCTAACGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droSec2 scaffold_0:16147555-16147804 - CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGA-------TCTAAG-GCCCC-A-----------------------A---------------------C--------------ATCTAG----------------------------ATA-----------TAAGAAACATA-----------------------------TAG-------------AGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GTA---GAAT-------------C-TGG-GCTAACGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
dm3 chr3R:5769567-5769816 + CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGA-------TCTAAG-GCCCC-A-----------------------A---------------------C--------------ATCTAG----------------------------ATA-----------TAAGAAACATA-----------------------------TAG-------------AGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCTAACGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCTATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droEre2 scaffold_4770:15833821-15834070 - CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGC-------TCTAGG---CCC-A-----------------------A---------------------A--------------ATCTAG----------------------------ATG-----------TAAGAAACATA-----------------------------TAG-----------TTAGATTGCTGTGG---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCCAGCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCC-------------------G------------------------------TTCTTGGCA-----CGAC-------------------------CACACGGCG-----------
droYak3 3R:9816556-9816824 + CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGC-------TCTAAG-GCCC--A-----------------------A---------------------A--------------ATCTAG----------------------------ATATAA-CA-----TAAGAAGCATATCTA------------TA---------------TAGATAGCATATAGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCTACCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droEug1 scf7180000409470:89971-90225 + CATCGGACGAGGGCATAGTCCTCGACTTCAAGGAAGAGCGCAAGAAAAAGGTAAGCAGTTCTA-------TCTACA-ACTTA-T-------------A--G-------TA-----CTTAAAATCTATCTAG-------------ATCTAG----------------------------AGCTAGATCTAGAATAAGAA---------------------TG---------------TAGATAT---------T---------------------------ATGAAATGCGGTCA----------------------------GAG---GAAT-------------C-----------------G--GGGCAT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCTATAATT------ATGTAAATGTCGG----CTT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droBia1 scf7180000302402:3260599-3260861 + CCTCGGACGAGGGCATTGTTATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGTGCCTCAG-------T--------GCCT--------------TCAATACCTG--------------CCCCCTAG-------AACTTAAGATCTAG----------------------------ATGCAGCCG-----TAGGAAAT----CTAGA------------------------------------------------TAC---------------------AGGAATGCGGTCA----------------------------GAG---GAAT-------------C-TGG-GTTGGCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGCAAATGTCGG----TCG-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------AACACGGCG-----------
droTak1 scf7180000415245:352607-352868 - CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGTGATTCGAT------TCGATC-TGGCCT--------------TC-----TTG--------------CTG------------AATTCA-------G--------------A------AATCTAGATATAGATA-----TAGGAAAT----CTAGA------------------------------------------------TAT---------------------AAGAATGCGGCCA----------------------------GAG---GAAT-------------C-TGG-GCTGTCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droEle1 scf7180000490967:968351-968612 - CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGCGTTTCGA-------TCCACA-TCCCCC--------------T--A------T---------------------A--------------ATCTAG--------------AATCTAGCATCTAGA-----ATCTATTA-----------TCTAGACA--------TG--TA---------------TCT------------------------------------CAGGGAATGCGGTCA----------------------------GAG---GAAT-------------C-TAG-GCTGCTGGCGGTG--GAGCGT--GAC--AT-T-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCG-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droRho1 scf7180000779916:60262-60537 - CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGCGATTCGA-------TCCACGTGCCCT-A-----------------------G---------------------A--------------ATCTAGAACTTAGAATTTAGAATTTAGAATCTAGA-----ATCTATTA-----------TCTAGATA--------TG--TA---------------TCG------------------------------------CAGGGAATGCGGTCA----------------------------GAG---GAAT-------------C-TGG-GCTGTTGGCGGTG--AAGCAT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCG-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------
droFic1 scf7180000454104:1071325-1071612 - CATCCGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTAAGCGATTTGCA------TCCACA-TCCCCT--------------TCAATTTATG--------------CTCTACACA--------------ATCTAG----------------------------ATGCAGATA-----TAG-------------ATAAAGATATATG---------------CAGATAT---GTA-----GTAGATATA-------------GAACAGAGAATGCGGTCA----------------------------GAG---GAAT-------------C-TGG-GCTGTTGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCA-------------------T------------------------------TTCTTGGCA-----CGAC-------------------------CACACGGCG-----------
droKik1 scf7180000302706:2003946-2004199 + CGTCGGACGAGGGCATTGTCATTGACTTCAAGGAGGATCGCAAGAAAAAGGTGAGTGATGCAA-------ACCGTG-GCAGA-T-----------------------A---------------------C--------------ATCTAG-----------------------------CA-----------GA-------------------------TGCATAGCACAGATAGATAGATAG---ATAGATACGC------------------------GTAGAATGCGGTCA----------------------------GGA---GA------------------------------GGTG--GAGCGT--GAC--TGTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----GCGGTTGGGCA---------T-A------------------------------TTTTTGGCA-----CGGC-------------------------CACACGGCG-----------
droAna3 scaffold_13340:6329336-6329591 + dan_2924 CCTCGGACGAGGGAATTGTCAGTGACTTCAAGGAGGAGCGTAAGAAAAAGGTGAGTTATCTGATGAGATATACACA-TTTCTT---------------------------------------------------------------------------------------------------------------------------ACATA--------TA-------------------TAT---------T-----AA----A-GGGGGGAAGGGGGCGTGGAATGTGGTCA----------------------------GAAGAGGAAT-------------C-TGG-GGTGGCGGCGGTG--GAGCGT--GAC--GCTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGAGCGGCTT-------------------A------------------------------TTCTTGGCA-----CGGC-------------------------CACACGACG-----------
droBip1 scf7180000396708:2514784-2515048 - CCTCGGACGAGGGAATTGTCAGTGACTTCAAGGAGGAGCGTAAGAAAAAGGTGAGTTATGTGA-------TACATT---TTA-T-----------------------A---------------------T--------------ACCTAT----------------------------ACA-----------TA-------------------------TG---------------CAT-------ATA-----GTATATA-AGAGGAGGGGAAGGGGCCGTGGAATGTGGTCA----------------------------GAAGAGGAAT-------------C-TGG-GCTGACGGCGGTG--GAGCGT--GAC--GCTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGAGCGGCTT-------------------A------------------------------TTCTTGGCA-----CGGC-------------------------CACACGACG-----------
dp5 2:5204997-5205263 - dps_365 CCTCGGACGAGGGCATTGTCATTGATTTCAAGGATGATCGCAAGAAAAAGGTGAGCCAAA-----------------------GATTCCCAAACC---CAA-------T------ACCAAACCCAATCGCAATCCCAATTCAAGATCTAT----------------------------AGA-----------TAAGA------------------------------------------------------------------------------------AGGAATGCGGTCA----------------------------A------AAT-------------C-TTG-GCG---GGAAGTA--GAGCGT--GAC--ATTTCTGTTGCATTTTGTTTAATTGCAACTTTGTGTAGAG-GATTTTAATTGCCATAATT------ATGTAAATGTCGGGCGGG------------TTTCATCT-A------------------------------TTTTTGGCA-----CGTC-------------------------CACACGGCG-----------
droPer2 scaffold_19:915119-915385 - dpe_949 CCTCGGACGAGGGCATTGTCATTGATTTCAAGGATGATCGCAAGAAAAAGGTGAGCCAAA-----------------------GATTCCCAAACT---CAA-------T------ACCAAACCCAATCGCAATCCCAATTCAAGATCTAT----------------------------AGA-----------TAAGA------------------------------------------------------------------------------------AGGAATGCGGTCA----------------------------A------AAT-------------C-TTG-GCG---GGAAGTA--GAGCGT--GAC--ATTTCTGTTGCATTTTGTTTAATTGCAACTTTGTGTAGAG-GATTTTAATTGCCATAATT------ATGTAAATGTCGGGCGGG------------TTTCAGCT-A------------------------------TTTTTGGCA-----CGTC-------------------------CACACGGCG-----------
droWil2 scf2_1100000004943:16297187-16297479 - CATCGGATGAGGGCATTGTCAGTGATTTCAAGGAGGAGCGCAAAAAGAAGGTAAGTCACA-----------------------A-----------------------A---------------------T--------------ATCCAA----------------------------ATGCAAATG-----CAAAAA------------------------------------------------------------AA---------------------AAGAATGCGGTCGCTTGGTCTGTCACTCAGTCAGTCGCTCAGT------CTATTAGTTGTTCGCTTT-G-GCAAACAGAG-CGCAGAGCATGCGAA--AATT-TGTTGCATT----TTAATTGCAACTTTGTATATA--GATTTTAATTGCTATAATT------ATGTAAATGTCAGGAGGCCT--TAGGCATATGTTAGGT-A------------------------------TTCTTGGCA-----CTCG----------------------------AAGACGCTTTTTTTCGC
droVir3 scaffold_13047:10747751-10748030 - dvi_16391 CATCAGATGAGGGTATTGTCATCGACTTCAAGGAGGAGCGCAAGAAGAAGGTAGGTCACACAC-------TC----------------ACACATCCATT-------------------------------------A-------ATTTAG----------------------------AGAGAG---------------------------------------------------AGAGAGAC---ATAGATAAGATCAA---------------------AGGAATGCGGTCA----------------------------G--------T-------------C-TG--CCAAACAGA-GCG--CAACGC--CACAAAATT-TGTTGCATT----TTAATTGCAACTTTGTATACC--GATTTTAATTGCTATAATTATATTTATGTAAATGCCTG----TGC-------A---------TAA------------------------------TTTTTGGCAAA---CGGCAGCAAAAGCAACAGCATATATGCAACACACGGCG-----------
droMoj3 scaffold_6540:31047188-31047476 + CATCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAGAAGGTAGGTCACTCAC-------GC----------------------------------------------------------AGTCC--AC-----------------------------------------------------------------------------------------------------------TCAGATTAGATCAA---------------------AGGAATGCGGCCA----------------------------GC------CT-------------T-TTGGCCAAACAGA-GCG--CAACGG--CACTAAATT-TGTTGCAAT----TTAATTGCAACTTTGTATTCC--GATTTTAATTGCTATAATTATACTTATGTAAATGTCGC----TGC-------A---------TCATTTCTCTTAATTTTTTTTTTTTTTTTTTTAATTTTGGCAAGCCTCAGC---AAAAGTGACAAGGCATACGAAACACGCGGCG-----------
droGri2 scaffold_14624:518836-519098 - CATCGGATGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAGAAGGTAGGTCAAA-------------------------TTTACAAATT--------TACGAT-TTAACAACACACACAA-----------------------------------------------------------CA-----CAACAA-TATT---------------------------------------------TGATTAGATCAA---------------------AAGAATGCGGCCA----------------------------GTG----------------------T-T-GCAAACAGAGCCG--CAACGC--GACGAAATT-TGTTGCATT----TTAATTGCGATTTTGTACACAGCGATTTTAATTGCTATAATTATATTTATGTAAATGCCGG----TGC-------A---------TCA-------------------------------TTTTGGCAGA-GACAGC-------------------------CAAGCAGC------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGA-------TCTAAG-GCCCC-A-----------------------A---------------------C--------------ATCTAG----------------------------ATA-----------TAAGAAACATA-----------------------------AAG-------------AGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GTA---GAAT-------------C-TGG-GCTAACGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CG...............................................2212.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----C................................................2212.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAATGTCGG----TCT-------------------G------------------------------T..............................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................GTAC---------------------AAGAATGCGGTCA----------------------------GTA---GA........................................................................................................................................................................................................................................................2211.00101000000000000000
...................................................................................................................................................................................................................................................................................................TCA----------------------------GTA---GAAT-------------C-TGG-GCTAACGG...........................................................................................................................................................................................................................2211.00101000000000000000
...CGGACGAGGGCATTGTCATCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.GTCGGACGAGGGCATTGTCATCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.........................CTACAAGGAGGAGCGCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.GTCGGACGAGGGCATTGTCATCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
........GAGGGCATTGTCATCGACTACAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
droSec2
CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGA-------TCTAAG-GCCCC-A-----------------------A---------------------C--------------ATCTAG----------------------------ATA-----------TAAGAAACATA-----------------------------TAG-------------AGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GTA---GAAT-------------C-TGG-GCTAACGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........GGGCATTGTCATCGACTACAAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
..............ATTGTCATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
................TGTCATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..............................................AAAGGTGGGTGATTCGA-------TCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
dm3
CGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGA-------TCTAAG-GCCCC-A-----------------------A---------------------C--------------ATCTAG----------------------------ATA-----------TAAGAAACATA-----------------------------TAG-------------AGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCTAACGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCTATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................GAGGAGCGCAAGAAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000200000000010000000000000000000000101000000000
.................GTCATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000
..............ATTGTCATCGACTACAAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........GGCATTGTCATCGACTACAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATCGACTACAAGGAGGAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCATTGTCATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................C---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-...................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................A-----------TAAGAAACATA-----------------------------TAG-------------AGATTGGT..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........GGCATTGTCATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTG--GAGCGT--GAC--ATTT-TGTTG.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................TCGACTACAAGGAGGAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACAAGGAGGAGCGCAAGAAAAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................CGACTACAAGGAGGAGCGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAGGGCATTGTCATCGACTACAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................CGACTACAAGGAGGAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCTAA..............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACTACAAGGAGGAGCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................TGTCATCGACTACAAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................................GG-GCTAACGGCGGTG--GAG.................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................AAACATA-----------------------------TAG-------------AGATTGGTGTAC---------------------AAG......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............ATTGTCATCGACTACAAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCT................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGGGTGATTCGA-------TCTAAG-GCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................ATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GAA---..........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................GAAACATA-----------------------------TAG-------------AGATTGGTGT................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................TGTCATCGACTACAAGGAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACTTTGTGTATA--GATTTTAATTG...................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATTGTCATCGACTACAAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GAA---..........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATT------ATGTAAATGTCGG----TC..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GATTGGTGTAC---------------------AAGAATGCGGT..............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................ACAAGGAGGAGCGCAAGAAAAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................TACAAGGAGGAGCGCAAGAAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................CAAGGAGGAGCGCAAGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................ATA-----------------------------TAG-------------AGATTGGTGTAC---------------------AAG......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACAAGGAGGAGCGCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTACAAGGAGGAGCGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATCGACTACAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GACTACAAGGAGGAGCGCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GGTGTAC---------------------AAGAATGCGGTCA----------------------------................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGG-GCTAACGGCGGTG--GAGC................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................AAGAAAAAGGTGGGTGATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
droEre2
CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGC-------TCTAGG---CCC-A-----------------------A---------------------A--------------ATCTAG----------------------------ATG-----------TAAGAAACATA-----------------------------TAG-----------TTAGATTGCTGTGG---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCCAGCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCC-------------------G------------------------------TTCTTGGCA-----CGAC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
CGTCGGACGAGGGCATTGTCATCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25134.003400000034
.......CGAGGGCATTGTCATCGACTTCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.................GTCATCGACTTCAAGGAGGAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................GTG--GAGCGT--GAC--ATTT-TGTTGCA...........................................................................................................................................................................................2311.0010000100
................TGTCATCGACTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...................CATCGACTTCAAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000100
.................................AGGAGCGCAAGAAAAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
.........................................................................................................................................................................................................................................................GATTGCTGTGG---------------------AAGAAGC..................................................................................................................................................................................................................................................................................................1880.1310000100
droYak3
CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGC-------TCTAAG-GCCC--A-----------------------A---------------------A--------------ATCTAG----------------------------ATATAA-CA-----TAAGAAGCATATCTA------------TA---------------TAGATAGCATATAGATTGGTGTAC---------------------AAGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-GCTACCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............ATTGTCATCGACTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00500000020003
...................CATCGACTTCAAGGAGGAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................................................................................TATAGATTGGTGTAC---------------------AAGAATGCGGT..............................................................................................................................................................................................................................................................................................2611.00100000010000
.........................................................................................................................................................................................................................................................GATTGGTGTAC---------------------AAGAATGCGGTC.............................................................................................................................................................................................................................................................................................2311.00100000010000
.................GTCATCGACTTCAAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............TTGTCATCGACTTCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................GTCATCGACTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
........GAGGGCATTGTCATCGACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
................................................................................................................................................................................................................................................................GTAC---------------------AAGAATGCGGTCA----------------------------GAA---..........................................................................................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................................................................................................................................AGAATGCGGTCA----------------------------GAA---GAAT-------------C-TGG-G..................................................................................................................................................................................................................................2411.00100000010000
...................CATCGACTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................CATCGACTTCAAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000
droEug1
CATCGGACGAGGGCATAGTCCTCGACTTCAAGGAAGAGCGCAAGAAAAAGGTAAGCAGTTCTA-------TCTACA-ACTTA-T-------------A--G-------TA-----CTTAAAATCTATCTAG-------------ATCTAG----------------------------AGCTAGATCTAGAATAAGAA---------------------TG---------------TAGATAT---------T---------------------------ATGAAATGCGGTCA----------------------------GAG---GAAT-------------C-----------------G--GGGCAT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCTATAATT------ATGTAAATGTCGG----CTT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droBia1
CCTCGGACGAGGGCATTGTTATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGTGCCTCAG-------T--------GCCT--------------TCAATACCTG--------------CCCCCTAG-------AACTTAAGATCTAG----------------------------ATGCAGCCG-----TAGGAAAT----CTAGA------------------------------------------------TAC---------------------AGGAATGCGGTCA----------------------------GAG---GAAT-------------C-TGG-GTTGGCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGCAAATGTCGG----TCG-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------AACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droTak1
CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGTGATTCGAT------TCGATC-TGGCCT--------------TC-----TTG--------------CTG------------AATTCA-------G--------------A------AATCTAGATATAGATA-----TAGGAAAT----CTAGA------------------------------------------------TAT---------------------AAGAATGCGGCCA----------------------------GAG---GAAT-------------C-TGG-GCTGTCGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCT-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droEle1
CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGCGTTTCGA-------TCCACA-TCCCCC--------------T--A------T---------------------A--------------ATCTAG--------------AATCTAGCATCTAGA-----ATCTATTA-----------TCTAGACA--------TG--TA---------------TCT------------------------------------CAGGGAATGCGGTCA----------------------------GAG---GAAT-------------C-TAG-GCTGCTGGCGGTG--GAGCGT--GAC--AT-T-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCG-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droRho1
CGTCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTGAGCGATTCGA-------TCCACGTGCCCT-A-----------------------G---------------------A--------------ATCTAGAACTTAGAATTTAGAATTTAGAATCTAGA-----ATCTATTA-----------TCTAGATA--------TG--TA---------------TCG------------------------------------CAGGGAATGCGGTCA----------------------------GAG---GAAT-------------C-TGG-GCTGTTGGCGGTG--AAGCAT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCG-------------------G------------------------------TTCTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droFic1
CATCCGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAAAAGGTAAGCGATTTGCA------TCCACA-TCCCCT--------------TCAATTTATG--------------CTCTACACA--------------ATCTAG----------------------------ATGCAGATA-----TAG-------------ATAAAGATATATG---------------CAGATAT---GTA-----GTAGATATA-------------GAACAGAGAATGCGGTCA----------------------------GAG---GAAT-------------C-TGG-GCTGTTGGCGGTG--GAGCGT--GAC--ATTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----TCA-------------------T------------------------------TTCTTGGCA-----CGAC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droKik1
CGTCGGACGAGGGCATTGTCATTGACTTCAAGGAGGATCGCAAGAAAAAGGTGAGTGATGCAA-------ACCGTG-GCAGA-T-----------------------A---------------------C--------------ATCTAG-----------------------------CA-----------GA-------------------------TGCATAGCACAGATAGATAGATAG---ATAGATACGC------------------------GTAGAATGCGGTCA----------------------------GGA---GA------------------------------GGTG--GAGCGT--GAC--TGTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGG----GCGGTTGGGCA---------T-A------------------------------TTTTTGGCA-----CGGC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotal
No Reads
droAna3
CCTCGGACGAGGGAATTGTCAGTGACTTCAAGGAGGAGCGTAAGAAAAAGGTGAGTTATCTGATGAGATATACACA-TTTCTT---------------------------------------------------------------------------------------------------------------------------ACATA--------TA-------------------TAT---------T-----AA----A-GGGGGGAAGGGGGCGTGGAATGTGGTCA----------------------------GAAGAGGAAT-------------C-TGG-GGTGGCGGCGGTG--GAGCGT--GAC--GCTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGAGCGGCTT-------------------A------------------------------TTCTTGGCA-----CGGC-------------------------CACACGACG-----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............ATTGTCAGTGACTTCAAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...........................................................................................................................................................................................................................................................................................................................................................TGG-GGTGGCGGCGGTG--GAGCG...............................................................................................................................................................................................................2111.001000001
..............ATTGTCAGTGACTTCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................TGG-GGTGGCGGCGGTG--GAGCT...............................................................................................................................................................................................................2111.001000001
..............ATTGTCAGTGACTTCAAGGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
droBip1
CCTCGGACGAGGGAATTGTCAGTGACTTCAAGGAGGAGCGTAAGAAAAAGGTGAGTTATGTGA-------TACATT---TTA-T-----------------------A---------------------T--------------ACCTAT----------------------------ACA-----------TA-------------------------TG---------------CAT-------ATA-----GTATATA-AGAGGAGGGGAAGGGGCCGTGGAATGTGGTCA----------------------------GAAGAGGAAT-------------C-TGG-GCTGACGGCGGTG--GAGCGT--GAC--GCTT-TGTTGCATT----TTAATTGCAACTTTGTGTATA--GATTTTAATTGCCATAATT------ATGTAAATGTCGAGCGGCTT-------------------A------------------------------TTCTTGGCA-----CGGC-------------------------CACACGACG-----------SizeHit CountTotal NormTotal
No Reads
dp5
CCTCGGACGAGGGCATTGTCATTGATTTCAAGGATGATCGCAAGAAAAAGGTGAGCCAAA-----------------------GATTCCCAAACC---CAA-------T------ACCAAACCCAATCGCAATCCCAATTCAAGATCTAT----------------------------AGA-----------TAAGA------------------------------------------------------------------------------------AGGAATGCGGTCA----------------------------A------AAT-------------C-TTG-GCG---GGAAGTA--GAGCGT--GAC--ATTTCTGTTGCATTTTGTTTAATTGCAACTTTGTGTAGAG-GATTTTAATTGCCATAATT------ATGTAAATGTCGGGCGGG------------TTTCATCT-A------------------------------TTTTTGGCA-----CGTC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................CATTGATTTCAAGGATGATCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
...CGGACGAGGGCATTGTCATTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..........................TTCAAGGATGATCGCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CCTCGGACGAGGGCATTGTCATTGATTTCAAGGATGATCGCAAGAAAAAGGTGAGCCAAA-----------------------GATTCCCAAACT---CAA-------T------ACCAAACCCAATCGCAATCCCAATTCAAGATCTAT----------------------------AGA-----------TAAGA------------------------------------------------------------------------------------AGGAATGCGGTCA----------------------------A------AAT-------------C-TTG-GCG---GGAAGTA--GAGCGT--GAC--ATTTCTGTTGCATTTTGTTTAATTGCAACTTTGTGTAGAG-GATTTTAATTGCCATAATT------ATGTAAATGTCGGGCGGG------------TTTCAGCT-A------------------------------TTTTTGGCA-----CGTC-------------------------CACACGGCG-----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............ATTGTCATTGATTTCAAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
......ACGAGGGCATTGTCATTGATTTCAAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
........................ATTTCAAGGATGATCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
....................ATTGATTTCAAGGATGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................CATTGATTTCAAGGATGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................ATTGATTTCAAGGATGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
CATCGGATGAGGGCATTGTCAGTGATTTCAAGGAGGAGCGCAAAAAGAAGGTAAGTCACA-----------------------A-----------------------A---------------------T--------------ATCCAA----------------------------ATGCAAATG-----CAAAAA------------------------------------------------------------AA---------------------AAGAATGCGGTCGCTTGGTCTGTCACTCAGTCAGTCGCTCAGT------CTATTAGTTGTTCGCTTT-G-GCAAACAGAG-CGCAGAGCATGCGAA--AATT-TGTTGCATT----TTAATTGCAACTTTGTATATA--GATTTTAATTGCTATAATT------ATGTAAATGTCAGGAGGCCT--TAGGCATATGTTAGGT-A------------------------------TTCTTGGCA-----CTCG----------------------------AAGACGCTTTTTTTCGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............ATTGTCAGTGATTTCAAGGAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..........GGGCATTGTCAGTGATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............ATTGTCAGTGATTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.............CATTGTCAGTGATTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
........GAGGGCATTGTCAGTGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................AAACAGAG-CGCAGAGCATGC............................................................................................................................................................................................................2011.00100001
.............CATTGTCAGTGATTTCAAGGAGGAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAATGTCAGGAGGC...................................................................................................................1811.00100010
.....................GTGATTTCAAGGAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.....GATGAGGGCATTGTCAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.........AGGGCATTGTCAGTGATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
................TGTCAGTGATTTCAAGGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
droVir3
CATCAGATGAGGGTATTGTCATCGACTTCAAGGAGGAGCGCAAGAAGAAGGTAGGTCACACAC-------TC----------------ACACATCCATT-------------------------------------A-------ATTTAG----------------------------AGAGAG---------------------------------------------------AGAGAGAC---ATAGATAAGATCAA---------------------AGGAATGCGGTCA----------------------------G--------T-------------C-TG--CCAAACAGA-GCG--CAACGC--CACAAAATT-TGTTGCATT----TTAATTGCAACTTTGTATACC--GATTTTAATTGCTATAATTATATTTATGTAAATGCCTG----TGC-------A---------TAA------------------------------TTTTTGGCAAA---CGGCAGCAAAAGCAACAGCATATATGCAACACACGGCG-----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....AGATGAGGGTATTGTCATCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
CATCAGATGAGGGTATTGTCATCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....GATGAGGGTATTGTCATCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...CAGATGAGGGTATTGTCATCGACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTATACC--GATTTTAATTGC..................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TT----TTAATTGCAACTTTGTATACC--..............................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
CATCGGACGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAGAAGGTAGGTCACTCAC-------GC----------------------------------------------------------AGTCC--AC-----------------------------------------------------------------------------------------------------------TCAGATTAGATCAA---------------------AGGAATGCGGCCA----------------------------GC------CT-------------T-TTGGCCAAACAGA-GCG--CAACGG--CACTAAATT-TGTTGCAAT----TTAATTGCAACTTTGTATTCC--GATTTTAATTGCTATAATTATACTTATGTAAATGTCGC----TGC-------A---------TCATTTCTCTTAATTTTTTTTTTTTTTTTTTTAATTTTGGCAAGCCTCAGC---AAAAGTGACAAGGCATACGAAACACGCGGCG-----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTATGTAAATGTCGC----TGC-------A---------TCAT............................................................................................2711.001100000
.........................................................................................................................................................................................................................................................GATTAGATCAA---------------------AGGAATGC.................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
CATCGGATGAGGGCATTGTCATCGACTTCAAGGAGGAGCGCAAGAAGAAGGTAGGTCAAA-------------------------TTTACAAATT--------TACGAT-TTAACAACACACACAA-----------------------------------------------------------CA-----CAACAA-TATT---------------------------------------------TGATTAGATCAA---------------------AAGAATGCGGCCA----------------------------GTG----------------------T-T-GCAAACAGAGCCG--CAACGC--GACGAAATT-TGTTGCATT----TTAATTGCGATTTTGTACACAGCGATTTTAATTGCTATAATTATATTTATGTAAATGCCGG----TGC-------A---------TCA-------------------------------TTTTGGCAGA-GACAGC-------------------------CAAGCAGC------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................TTCAAGGAGGAGCGCAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/18/2015 at 10:42 AM