ID:

dsi_27440

 Coordinate:

3r:6383909-6384186 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.3 -15.2 -15.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAGACGCAGCTTATGCTCGATGCATGCGTCAGCGCAGATAGTGAAATCAAGTGAGTACATTAGATATTTGTTAACTTGCCTCCTAAAATCGTACCGTATTAGAAAAAGACTTTCGAGTAAATCTCTTAATTGTATAGATTTCAATTTAACTGAATTGTAATTACTATATTGTATCTTAAATGGCTTAGAAACTTTTATTGTATTTATCAGAAGACTAGATTTTTATAATGGATGTATTAGATGTTAGCTAAATGATCTGTGAATATAGGTATACAAACTTAAATTTGAAAAATGTTGCATATATGATAATTATTTCGGCATACCCCAGGTTAAACACAGCCACGGTATAAATATCGAGCACCTAACGCACAAGCAACG
**************************************************************************************************************************.........(((((((((.((((((....)))))).)))..))))))...........(((((....(((.((((.(((((((((...((((......))))...))))))))).)))).))))))))..****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
..........................................................................................................................CTCTTAATTGTATAGATTT............................................................................................................................................................................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0 0
.............................................................................................................................................................................................................................................TAGATGTTAGCTAAA.............................................................................................................................. 15 0 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................................................................................................................................................AGTAGATGTTAGCTAAAT............................................................................................................................. 18 1 3 1.33 4 4 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TAGATGTTAGCTAAAT............................................................................................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................TATAATGGATGTATTAGATGTTAGC.................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0
......CAGCTTATGCTCGATGCATGC............................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
............................................................TAGATATTTGTTAACTTGCCT......................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................................................................................TGTAGAGTTTTCAAATTAACTGA................................................................................................................................................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................AGATGTTAGCTAAAT............................................................................................................................. 15 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................ATTGTATCTTAAATGGCTT................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................AGTAGATGTTAGCTAAA.............................................................................................................................. 17 1 3 0.67 2 2 0 0 0 0 0 0
............................................................................................................................................................................................................................................GTAGATGTTAGCTAAA.............................................................................................................................. 16 1 4 0.50 2 2 0 0 0 0 0 0
....................................................................................................................................TATAGATTTCAATTTGACTGTCT............................................................................................................................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................................AGATGTTAGCTAAATC............................................................................................................................ 16 1 5 0.40 2 2 0 0 0 0 0 0
............................................................................................................................................................................................................................................GTAGATGTTAGCTAAAT............................................................................................................................. 17 1 3 0.33 1 1 0 0 0 0 0 0
................................................AAGTGTGTACATTAGATA........................................................................................................................................................................................................................................................................................................................ 18 1 5 0.20 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................GTAGATGTTAGCTAA............................................................................................................................... 15 1 8 0.13 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................AGTAGATGTTAGCTA................................................................................................................................ 15 1 8 0.13 1 1 0 0 0 0 0 0
...................................................................................................................................................AACTGACTTGTAATT........................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 1
..................................................................................CTAACCTCGTACCGT......................................................................................................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

TTCTGCGTCGAATACGAGCTACGTACGCAGTCGCGTCTATCACTTTAGTTCACTCATGTAATCTATAAACAATTGAACGGAGGATTTTAGCATGGCATAATCTTTTTCTGAAAGCTCATTTAGAGAATTAACATATCTAAAGTTAAATTGACTTAACATTAATGATATAACATAGAATTTACCGAATCTTTGAAAATAACATAAATAGTCTTCTGATCTAAAAATATTACCTACATAATCTACAATCGATTTACTAGACACTTATATCCATATGTTTGAATTTAAACTTTTTACAACGTATATACTATTAATAAAGCCGTATGGGGTCCAATTTGTGTCGGTGCCATATTTATAGCTCGTGGATTGCGTGTTCGTTGC
******************************************************************************************************************************.........(((((((((.((((((....)))))).)))..))))))...........(((((....(((.((((.(((((((((...((((......))))...))))))))).)))).))))))))..************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 O002
Head
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................TACAACGTATATACTATT..................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................CCATATGTCTGAATTTTAA............................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TTTTCAGCTCGTGGTTTGCGTG........ 22 3 2 0.50 1 0 0 1 0 0 0 0 0
.....................................................................................................................................TCGCTAAAGTTAAAGTGACTTA............................................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................TGGATTGCCTGTGCGTTG. 18 2 5 0.20 1 0 0 0 1 0 0 0 0
.................GCGAAGTACGCAGTGGCGT...................................................................................................................................................................................................................................................................................................................................................... 19 3 11 0.18 2 0 0 0 0 0 0 1 1
..........................................................................................................................................................................................................................................................................TCGATATGTTTCAATGTAAACT.......................................................................................... 22 3 6 0.17 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................CGAATCTCTGAAAAGAAC.................................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................TATTACGTACATAATCGAGA...................................................................................................................................... 20 3 12 0.08 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................AAAAATATTATCTACA............................................................................................................................................... 16 1 13 0.08 1 0 0 0 0 0 1 0 0
.................GCGAAGTACGCAGTGGCG....................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0
.......................................................................ATTGCACGGAGGTATTTAG................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:6383859-6384236 + dsi_27440 AAGACGCAGCTTATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTACATT--AGATATTT-------GTTAACTTGCCTCC-----T---AAAATCGTACCGTATTAGAAAAAGA----CTTTC--------------GAGTAAATCTCTTAA-------------TTGTATAGATTTCA----------------------------------------------------ATTTA-----------------------ACTGAATTGTAATTACTATATTGTA-TC----------TTAAATGGCTTAGAAACTTTTA-----TTGTATT----------------------------------------------------------------------------------------------------TATCAGAA-----------------------GACTAGATTTTTATAATGGATGT-----------ATTAGATGTTAGCTAAATGATCTGTGAATA-TAGGT-ATACAAACTT-AAATTTGAAAAATGTTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGCACCTAACGCACA-AGCAACG
droSec2 scaffold_77:64808-65188 + AAGACCCAGCTTATGCTCGATGCATGCG---------------------TCAGTGCAGATAGTGAAATCAAGTGAGTACATT--AGATATTT-------TTAAACTTGCCTCG-----T---AAAATCGTACCGTATTAGAAAAAGA----CTTTC--------------GAGTAAATCTCTTAA-------------ATGTATGGATTTCA----------------------------------------------------ATTTA-----------------------ACTGAATTGTAATTACTATATTGTA-TC----------TTAAATAGCTTAGAAACTTTTA-----TTGTATT----------------------------------------------------------------------------------------------------TATCAGAATC--------------------AAACTAGATTTTTATGATGGATGT-----------ATTAGATGTTAGCTAAATGATCTGTGAATA-TAAGT-ATACAAACTT-AAATTTGAAAAATGTTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGAACCTAACGCACA-AGCAACG
dm3 chr3R:14873398-14873759 - AAGACGCAGCTTATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTAGATATTAGATATTT------TTTTAACTTGCCTCG-----T---AAAATCGTACCGTATTAGAAGAAGA----CTTTC--------------GAGTAAATCTCTTAA-------------TTGTATAGATTTCA----------------------------------------------------ATTTA-----------------------ACTGAATTGTAATGACCATATTGTA-TC----------TTAAATGGCTTAGA-------------------------------------------------------------------------------------------------------------------------------ATC--------------------AAAATAGATTTTTATAATGGATGT-----------ATTAGATGTTAGCTAAATGATCTGTGAATA-TACGT-ATACAAACTT-AAATTTGAAAAATGTTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGCACCTAACGCACA-AGCAACG
droEre2 scaffold_4770:6755448-6755836 + AAGACGCAGCTTATGCTCGACGCATGCG---------------------TCAGCGCAGACAGTGAAATCAAGTAAGTATATT--AAAAATTG-------TTGAACTTACTTTG-----T---AATAATGTACCGTATTGCAAAAAGA----TT-TT--------------GAGCAAATTTCTTAAATATATAGATTAAATGTATAGATTTCA----------------------------------------------------ATTTA-----------------------AATGAATTTGAAGTACTAGTTGGTAATC----------GTAAATGGCATAGAAAC------------ATATT----------------------------------------------------------------------------------------------------TATCGGAATC--------------------AAACTAGGTTTTTAAATTGTATGT-----------ATTTGACGTTAGCTAAATGAACTGTAAATACGTATGTAAACAAACTT-TTATTTTAAAAATATTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAAAATCGAGCTCCTAACGCACA-AGCAACG
droYak3 3R:3551427-3551809 - AAGACGCAGCTTATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTACACA--AGATATTT-------TTGAACTTACTTTA-----T---AATATCGTACCGTATTAGATAAAGA----CTTTC---------------AGTAAATCTCTTAA-------------ATGTATAGATTATA----------------------------------------------------TCATA-----------------------ATTGAAATCTAATTACTATATTGTAGTCGTTCAGAACCTT---TGGCTCAAAAACTTTTA-----TTATATT----------------------------------------------------------------------------------------------------TATCTTAATC--------------------AAACTAGGTTTTTAAATTGTATGT-----------TTCTGACGTTAGCTTAATGAACTGT------------ACACAAACAT-TAGTTTTAAAAATATTTCAT-------ATAA-TATAT----GATACTTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGCCCCAAGCGCACA-CGAAAAG
droEug1 scf7180000409804:1114779-1115109 - AAGACGCAGCTAATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTATATC--AGATCTCTTACAACAGAAAACT------------AACT---TCCGTGTTTTATAAGGAAAGAGAAAAATTTAGTA------CA-----------------------------------------------------------------------TATTTATATATACGAATGTGATTTAGA-----TCTTTCCGAACGTTG--TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAAATG--------------------AAATGAGA---------------T-----------GTTAAATGTTAGCTAAAAGAACTTCAAATA-TACTT-TTACAAATAG-AATACCTTTAAATATTGAAT-------------ATAT----GGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATGGTATAAATATCGAGCCCCTAACGCACA-AACCACG
droBia1 scf7180000302402:626632-626947 - AAGACGCAGTTAATGCTCGATGCATGTG---------------------CCAGCGCAGATAGTGAAATCAAGTGAGTACATG--GGATCTTA-------TTAAACTTAACGTATGTTGTACT---TCTGTGAATGATTAGAAAAGAG----ATTTAGTGTCTAAACATGT---------------------------------TGGATTTCG----------------------------------------------------ATTTGATTTGTAAACTAGTTG--TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------T--------------------AAACCAGAACTTAAAACTGCATGT-----------CTT--------------------------A-TACCG-ATAAAAACTTTGATATCCTAAAATGTTGAAT-------------ATATACCAAGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATGGTATAAAAATCGAGCCCCAAATGCACA-AGCAACG
droTak1 scf7180000415256:369308-369610 - AAGACGCAGCTAATGCTCGATGCATGCG---------------------TCAGCGCAAATAGTGAAATCAAGTAAGTAAATC--GGATCATA-------T--AACTTTGAATATTTTGTACT---TCTGTAATA-----------GA----TTTTTGTGTCTAAAATTGT---------------------------------TGGATTGCA----------------------------------------------------ATTTAATCTTAGAGATCGTTGTGTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------T--------------------AAAGAAAAGCTTTCAAATGCATGT-----------TTCAAA--TTACCTAAATAAT-----AATA-TACCG-ATAGAAA------------------TTGAAT-------------ATAT----AGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATGGTATAAATATCGAGCCCCAAACGCACACAACAACG
droEle1 scf7180000490994:629958-630324 - AAGGCGCAGTTGATGCTCGATGCATGTG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTATAT---AGATCTCT-------TAAAACTTATGTG----------------GTACCTTAT---------------------GCTTAAAGTTGT---------------------------------TC--------------------AAAGAAAAAAGGATATATCTAAGAGT-AATGT--TAACA---------------------------------------------------------------ATC-----------------TTCCAAGTCTATGTATT----------------------------------------------------------------------------------------------------TATCAAAAACTTGATAGCCGTTTAAATATGAAAGTGAGCTACCAATATGTATGT--TTATCAATTCTTCAGTGTGAGCTAAACGAACTTTAAATAATAATG-ATAGAAAATT-GATATCTTAAACTGTTGAAC-------------ATGT----TGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATCGTATAAATATCGAGCTGCAAACGCACA-AAGACCG
droRho1 scf7180000779900:527437-527843 - AAGACGCAGCTAATGATCGATGCATGTG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTATAT---AGATCTC---------AAAAGTTGTGTGA-----T---ACTTCCGTAGCATATTAGCAAAAAA----CTTTGTTGTTTAAAG-TGT---------------------------------TATATTTCAACTAATTATCAACA-AGGAAAAGTGTTATATCTAAGAATTATTGT--TAAGA---------------------------------------------------------------ATC-----------------TTCCAAATCGATGTATT----------------------------------------------------------------------------------------------------TATCAAAATCTTGATAAACGTTTAAATATGAACGTCAAATTCAATTATGTATGTGTTTTTCGAT-TTTTAATGTTAGCTAAACGAAGTTTAAATAATAATG-ATAGAAATCT-GATA---TAAAATGTTGAAC-------------AAGT----TGTAATTATTTCGGCCTATCCCAGGTTAAACACA-------GCCACGGTGTAAATATCGAGCCCCAATTGCACA-AACGCCG
droFic1 scf7180000453812:165664-166102 + AAGGCAAAGCTTATGCTTGATGCATGTG---------------------TCAGCGCGGATAGTGAAATCAAGTGAGTATATC--AGGCCCTA-------TAAAAC-CGTATAA---T-TACT---TCATTAGTTTATTG-AAAAAGA----TTTTT--------------GAAATAA---CTT------------------------------------------A-AAAAAAAGTGGTATTTAGATATATAAATGT--TTGGG---------------------------------------------------------------ATC-----------------TTGCAAATCCTTATATCTTCTTTTATCTTCATTTTTTGACTTCATTTAATACTTCGGGTATTAATATGCTTCCTAAAAATGGGTGTTATTTTTATGTCACTACTCAAAAACTACTAATAGCATAAACTTGG---------------------------------------T-----------AGTTGTTGTTAGCTTAGTAATCATCGAATAATAATT-TCATCAA----TTATCTTAAAAATTTTAAAT-------------ATATGTATAGTAATTGTTTCGACGTATCCCAGGTTGAACACA-------GCAATGGTATAAATATCGAGCCTCTAACGCACA-AACGACG
droKik1 scf7180000300058:218254-218313 + AAGGCGCAGCTGTTGCTCGACACAGGTG---------------------GCAGCGCCAACAGTGAACTCAAGTGAGTATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:17509556-17509880 - AAGACTCAGCTACTGCTCGATGCAGGAA---------------------GTGGCGCCAACAGTGAACTCAAGTACGTATGCC--ACATGTGTGACGT-CCTCAACTA--TGCA-----C---AAAACCACACAACCCACAGTTAAGA----TTTGT--------------CAGCA---------------------------------TTGT----------------------------------------------------ATTTGTG----GTATACATTG--TATACATTGAATAGTAAAAACCATT------------------------------------TCTAAGCACATGCATT----------------------------------------------------------------------------------------------------GGTGAAACACT------------------------------CTTCTATG---GTGCCTTTCATT-----------------------------------------------------TCCTATTGCCTTGAACAAATGTAGTAATGTTAG----GATAATTCTTTTAATAT---TCAGGCTAAACTCCACATTAAACTGCGGCATACATATCGAGCCC-TAACACG-A-AATAACG
droBip1 scf7180000396721:422472-422528 + AAGACGCAGCTACTGCTCGACGCAGGAA---------------------GTGGCGCCAACAGTGAACTCAAGTACGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:6804514-6804566 - AAGACG---CTAATGCTCGACGCAGCAG---------------------GCGGCGCAAGCAGTGAAATGAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:642043-642095 - AAGACG---CTAATGCTCGACGCAGCAG---------------------GCGGCGCAAGCAGTGAAATGAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:2104548-2104660 + AAGGCTCAACTAAGCCTCGATCCTGGTGCGGGAACAGGCGGCGGACCGGTCAACAATGCTAGTGAACTCAAGTAAGTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGAATCTT---TGTCTTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----TAAT----------------------------------------------TCGACCTCT-----------------
droVir3 scaffold_12822:17333-17387 - AAATCACAGCTGAGGATTGAAACTTT---------------------------GGCAAATCATAAACTTAAGTAAGCACTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:32673236-32673242 - AAATCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:3721538-3721595 + AAATCCCAGCTGAGGATCGAGACTGTTG---------------------GCA------ATAATAAACTCAAGTAAACGAATT--TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGACGCAGCTTATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTACATT--AGATATTT-------GTTAACTTGCCTCC-----T---AAAATCGTACCGTATTAGAAAAAGA----CTTTC--------------GAGTAAATCTCTTAA-------------TTGTATAGATTTCA----------------------------------------------------ATTTA-----------------------ACTGAATTGTAATTACTATATTGTA-TC----------TTAAATGGCTTAGAAACTTTTA-----TTGTATT----------------------------------------------------------------------------------------------------TATCAGAA-----------------------GACTAGATTTTTATAATGGATGT-----------ATTAGATGTTAGCTAAATGATCTGTGAATA-TAGGT-ATACAAACTT-AAATTTGAAAAATGTTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGCACCTAACGCACA-AGCAACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................CTCTTAA-------------TTGTATAGATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATGTTAGCTAAA..........................................................................................................................................................1512.00200000000002000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATGTTAGCTAAAT.........................................................................................................................................................1611.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATGGATGT-----------ATTAGATGTTAGC..............................................................................................................................................................2511.00100000010000000000
......CAGCTTATGCTCGATGCATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.................................................................................T--AGATATTT-------GTTAACTTGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTTAGCTAAAT.........................................................................................................................................................1511.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................ATTGTA-TC----------TTAAATGGCTT.......................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTTAGCTAAATC........................................................................................................................................................1650.40200000000002000000
droSec2
AAGACCCAGCTTATGCTCGATGCATGCG---------------------TCAGTGCAGATAGTGAAATCAAGTGAGTACATT--AGATATTT-------TTAAACTTGCCTCG-----T---AAAATCGTACCGTATTAGAAAAAGA----CTTTC--------------GAGTAAATCTCTTAA-------------ATGTATGGATTTCA----------------------------------------------------ATTTA-----------------------ACTGAATTGTAATTACTATATTGTA-TC----------TTAAATAGCTTAGAAACTTTTA-----TTGTATT----------------------------------------------------------------------------------------------------TATCAGAATC--------------------AAACTAGATTTTTATGATGGATGT-----------ATTAGATGTTAGCTAAATGATCTGTGAATA-TAAGT-ATACAAACTT-AAATTTGAAAAATGTTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGAACCTAACGCACA-AGCAACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CG---------------------TCAGTGCAGATAGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........CTTATGCTCGATGCATGCG---------------------TCAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
AAGACGCAGCTTATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTAGATATTAGATATTT------TTTTAACTTGCCTCG-----T---AAAATCGTACCGTATTAGAAGAAGA----CTTTC--------------GAGTAAATCTCTTAA-------------TTGTATAGATTTCA----------------------------------------------------ATTTA-----------------------ACTGAATTGTAATGACCATATTGTA-TC----------TTAAATGGCTTAGA-------------------------------------------------------------------------------------------------------------------------------ATC--------------------AAAATAGATTTTTATAATGGATGT-----------ATTAGATGTTAGCTAAATGATCTGTGAATA-TACGT-ATACAAACTT-AAATTTGAAAAATGTTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGCACCTAACGCACA-AGCAACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............TGCTCGATGCATGCG---------------------TCAGCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGT-----------ATTAGATGTTAGCT.............................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AGAAGAAGA----CTTTC--------------GAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTT-AAATTTGAAAAA...............................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCGATGCATGCG---------------------TCAGCGCAGATAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GAAGA----CTTTC--------------GAGTAAATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
........................TGCG---------------------TCAGCGCAGATAGTGAAATCAACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCTGTGAATA-TACGT-ATACAAACT.............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TATGCTCGATGCATGCG---------------------TCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATGGCTTAGA-------------------------------------------------------------------------------------------------------------------------------ATC--------------------AAAATAGATTTTT.................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................ATGCG---------------------TCAGCGCAGATAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCATGCG---------------------TCAGCGCAGATAGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CGCAGATAGTGAAATCAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCTTATGCTCGATGCATGCG---------------------TCAGCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACGCAGCTTATGCTCGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCATGCG---------------------TCAGCGCAGATAGTGAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AATCGTACCGTATTAGAAGAAGA----C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCTCGATGCATGCG---------------------TCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAACTT-AAATTTGAAAAATGT............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GATGCATGCG---------------------TCAGCGCAGATAGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................CATGCG---------------------TCAGCGCAGATAGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GATGCATGCG---------------------TCAGCGCAGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATGCG---------------------TCAGCGCAGATAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------GCCACGGTATAAATAT.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GTATTAGAAGAAGA----CTTTC--------------GAGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAATGGATGT-----------ATTAGATGTTAGC..............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGT-----------ATTAGATGTTAGCTAAAT.........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTCGATGCATGCG---------------------TCAGCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CTTATGCTCGATGCATGCG---------------------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........GCTTATGCTCGATGCATGCG---------------------TCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................TCAAGTGAGTAGATATTAGATATTT------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGCATGCG---------------------TCAGCGCAGATAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTATGCTCGATGCATGCG---------------------TCAGCGCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCATGCG---------------------TCAGCGCAGATAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TATGCTCGATGCATGCG---------------------TCAGCGCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGCTAAATGATCTGTGAATA-TACGT-......................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTATAAATATCGAGCACCT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTT-AAATTTGAAAAAGT.............................................................................................................20120.5870000000000000000000000000000000000000000000000000000000000000000000000000000022110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTT-AAATTTGAAAAAG..............................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTT-AAATTTGAAAAAG..............................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGACGCAGCTTATGCTCGACGCATGCG---------------------TCAGCGCAGACAGTGAAATCAAGTAAGTATATT--AAAAATTG-------TTGAACTTACTTTG-----T---AATAATGTACCGTATTGCAAAAAGA----TT-TT--------------GAGCAAATTTCTTAAATATATAGATTAAATGTATAGATTTCA----------------------------------------------------ATTTA-----------------------AATGAATTTGAAGTACTAGTTGGTAATC----------GTAAATGGCATAGAAAC------------ATATT----------------------------------------------------------------------------------------------------TATCGGAATC--------------------AAACTAGGTTTTTAAATTGTATGT-----------ATTTGACGTTAGCTAAATGAACTGTAAATACGTATGTAAACAAACTT-TTATTTTAAAAATATTGCAT-------------ATAT----GATAATTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAAAATCGAGCTCCTAACGCACA-AGCAACGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................AGCGCAGACAGTGAAATCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
droYak3
AAGACGCAGCTTATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTACACA--AGATATTT-------TTGAACTTACTTTA-----T---AATATCGTACCGTATTAGATAAAGA----CTTTC---------------AGTAAATCTCTTAA-------------ATGTATAGATTATA----------------------------------------------------TCATA-----------------------ATTGAAATCTAATTACTATATTGTAGTCGTTCAGAACCTT---TGGCTCAAAAACTTTTA-----TTATATT----------------------------------------------------------------------------------------------------TATCTTAATC--------------------AAACTAGGTTTTTAAATTGTATGT-----------TTCTGACGTTAGCTTAATGAACTGT------------ACACAAACAT-TAGTTTTAAAAATATTTCAT-------ATAA-TATAT----GATACTTATTTCGGCATACCCCAGGTTAAACACA-------GCCACGGTATAAATATCGAGCCCCAAGCGCACA-CGAAAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................G---------------------TCAGCGCAGATAGTGAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.00201000010000
.....GCAGCTTATGCTCGATGCATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGGCATACCCCAGGTT.......................................................2020.50100100000000
droEug1
AAGACGCAGCTAATGCTCGATGCATGCG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTATATC--AGATCTCTTACAACAGAAAACT------------AACT---TCCGTGTTTTATAAGGAAAGAGAAAAATTTAGTA------CA-----------------------------------------------------------------------TATTTATATATACGAATGTGATTTAGA-----TCTTTCCGAACGTTG--TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAAATG--------------------AAATGAGA---------------T-----------GTTAAATGTTAGCTAAAAGAACTTCAAATA-TACTT-TTACAAATAG-AATACCTTTAAATATTGAAT-------------ATAT----GGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATGGTATAAATATCGAGCCCCTAACGCACA-AACCACGSizeHit CountTotal NormTotal
No Reads
droBia1
AAGACGCAGTTAATGCTCGATGCATGTG---------------------CCAGCGCAGATAGTGAAATCAAGTGAGTACATG--GGATCTTA-------TTAAACTTAACGTATGTTGTACT---TCTGTGAATGATTAGAAAAGAG----ATTTAGTGTCTAAACATGT---------------------------------TGGATTTCG----------------------------------------------------ATTTGATTTGTAAACTAGTTG--TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------T--------------------AAACCAGAACTTAAAACTGCATGT-----------CTT--------------------------A-TACCG-ATAAAAACTTTGATATCCTAAAATGTTGAAT-------------ATATACCAAGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATGGTATAAAAATCGAGCCCCAAATGCACA-AGCAACGSizeHit CountTotal NormTotal
No Reads
droTak1
AAGACGCAGCTAATGCTCGATGCATGCG---------------------TCAGCGCAAATAGTGAAATCAAGTAAGTAAATC--GGATCATA-------T--AACTTTGAATATTTTGTACT---TCTGTAATA-----------GA----TTTTTGTGTCTAAAATTGT---------------------------------TGGATTGCA----------------------------------------------------ATTTAATCTTAGAGATCGTTGTGTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------T--------------------AAAGAAAAGCTTTCAAATGCATGT-----------TTCAAA--TTACCTAAATAAT-----AATA-TACCG-ATAGAAA------------------TTGAAT-------------ATAT----AGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATGGTATAAATATCGAGCCCCAAACGCACACAACAACGSizeHit CountTotal NormTotal
No Reads
droEle1
AAGGCGCAGTTGATGCTCGATGCATGTG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTATAT---AGATCTCT-------TAAAACTTATGTG----------------GTACCTTAT---------------------GCTTAAAGTTGT---------------------------------TC--------------------AAAGAAAAAAGGATATATCTAAGAGT-AATGT--TAACA---------------------------------------------------------------ATC-----------------TTCCAAGTCTATGTATT----------------------------------------------------------------------------------------------------TATCAAAAACTTGATAGCCGTTTAAATATGAAAGTGAGCTACCAATATGTATGT--TTATCAATTCTTCAGTGTGAGCTAAACGAACTTTAAATAATAATG-ATAGAAAATT-GATATCTTAAACTGTTGAAC-------------ATGT----TGTAATTATTTCGGCATATCCCAGGTTAAACACA-------GCCATCGTATAAATATCGAGCTGCAAACGCACA-AAGACCGSizeHit CountTotal NormTotal
No Reads
droRho1
AAGACGCAGCTAATGATCGATGCATGTG---------------------TCAGCGCAGATAGTGAAATCAAGTGAGTATAT---AGATCTC---------AAAAGTTGTGTGA-----T---ACTTCCGTAGCATATTAGCAAAAAA----CTTTGTTGTTTAAAG-TGT---------------------------------TATATTTCAACTAATTATCAACA-AGGAAAAGTGTTATATCTAAGAATTATTGT--TAAGA---------------------------------------------------------------ATC-----------------TTCCAAATCGATGTATT----------------------------------------------------------------------------------------------------TATCAAAATCTTGATAAACGTTTAAATATGAACGTCAAATTCAATTATGTATGTGTTTTTCGAT-TTTTAATGTTAGCTAAACGAAGTTTAAATAATAATG-ATAGAAATCT-GATA---TAAAATGTTGAAC-------------AAGT----TGTAATTATTTCGGCCTATCCCAGGTTAAACACA-------GCCACGGTGTAAATATCGAGCCCCAATTGCACA-AACGCCGSizeHit CountTotal NormTotal
No Reads
droFic1
AAGGCAAAGCTTATGCTTGATGCATGTG---------------------TCAGCGCGGATAGTGAAATCAAGTGAGTATATC--AGGCCCTA-------TAAAAC-CGTATAA---T-TACT---TCATTAGTTTATTG-AAAAAGA----TTTTT--------------GAAATAA---CTT------------------------------------------A-AAAAAAAGTGGTATTTAGATATATAAATGT--TTGGG---------------------------------------------------------------ATC-----------------TTGCAAATCCTTATATCTTCTTTTATCTTCATTTTTTGACTTCATTTAATACTTCGGGTATTAATATGCTTCCTAAAAATGGGTGTTATTTTTATGTCACTACTCAAAAACTACTAATAGCATAAACTTGG---------------------------------------T-----------AGTTGTTGTTAGCTTAGTAATCATCGAATAATAATT-TCATCAA----TTATCTTAAAAATTTTAAAT-------------ATATGTATAGTAATTGTTTCGACGTATCCCAGGTTGAACACA-------GCAATGGTATAAATATCGAGCCTCTAACGCACA-AACGACGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGGCGCAGCTGTTGCTCGACACAGGTG---------------------GCAGCGCCAACAGTGAACTCAAGTGAGTATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAGACTCAGCTACTGCTCGATGCAGGAA---------------------GTGGCGCCAACAGTGAACTCAAGTACGTATGCC--ACATGTGTGACGT-CCTCAACTA--TGCA-----C---AAAACCACACAACCCACAGTTAAGA----TTTGT--------------CAGCA---------------------------------TTGT----------------------------------------------------ATTTGTG----GTATACATTG--TATACATTGAATAGTAAAAACCATT------------------------------------TCTAAGCACATGCATT----------------------------------------------------------------------------------------------------GGTGAAACACT------------------------------CTTCTATG---GTGCCTTTCATT-----------------------------------------------------TCCTATTGCCTTGAACAAATGTAGTAATGTTAG----GATAATTCTTTTAATAT---TCAGGCTAAACTCCACATTAAACTGCGGCATACATATCGAGCCC-TAACACG-A-AATAACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................GT--------------CAGCA---------------------------------TTGT----------------------------------------------------ATTTGTG----GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
..........TACTGCTCGATGCAGGAA---------------------GTGGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000020
.........CTACTGCTCGATGCAGGAA---------------------GTGGCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................GCAGGAA---------------------GTGGCGCCAACAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................CGATGCAGGAA---------------------GTGGCGCCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........GCTACTGCTCGATGCAGGAA---------------------GTGGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...................................................GGCGCCAACAGTGAACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................GCAGGAA---------------------GTGGCGCCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATACATATCGAGCCC-TAACACG-A-A......2711.001010000
.................CGATGCAGGAA---------------------GTGGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
AAGACGCAGCTACTGCTCGACGCAGGAA---------------------GTGGCGCCAACAGTGAACTCAAGTACGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAGACG---CTAATGCTCGACGCAGCAG---------------------GCGGCGCAAGCAGTGAAATGAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............GCTCGACGCAGCAG---------------------GCGGCGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................CGCAGCAG---------------------GCGGCGCAAGCAGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................GCAAGCAGTGAAATGAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000100000
droPer2
AAGACG---CTAATGCTCGACGCAGCAG---------------------GCGGCGCAAGCAGTGAAATGAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................GGCGCAAGCAGTGAAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
droWil2
AAGGCTCAACTAAGCCTCGATCCTGGTGCGGGAACAGGCGGCGGACCGGTCAACAATGCTAGTGAACTCAAGTAAGTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGAATCTT---TGTCTTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----TAAT----------------------------------------------TCGACCTCT-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................GATCCTGGTGCGGGAACAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
.......AACTAAGCCTCGATCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.......AACTAAGCCTCGATCCTGGTGCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........CTAAGCCTCGATCCTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............GCCTCGATCCTGGTGCGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................................GGCGGACCGGTCAACAATGCTAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
AAATCACAGCTGAGGATTGAAACTTT---------------------------GGCAAATCATAAACTTAAGTAAGCACTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................GCAAATCATAAACTTAAGTAAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.005001000000000000000000000000000000000004000000000000000000000000
...TCACAGCTGAGGATTGAAACTTT---------------------------GGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003001100000000000000000000000000001000000000000000000000000000000
......................................................GCAAATCATAAACTTAAGTAAGCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000020000000000000000000000000000000000000000000000000000000000
............AGGATTGAAACTTT---------------------------GGCAAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000000000000000000000000000000000000000000000000000000000000
....CACAGCTGAGGATTGAAACTTT---------------------------GGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000200000000000000000000000000000000000000000000000000000000000
................TTGAAACTTT---------------------------GGCAAATCATAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
...TCACAGCTGAGGATTGAAACTTT---------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
......................................................GCAAATCATAAACTTAAGTAAGCATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
..ATCACAGCTGAGGATTGAAACTTT---------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
....CACAGCTGAGGATTGAAACTTT---------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................CAAATCATAAACTTAAGTAAGCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
...........GAGGATTGAAACTTT---------------------------GGCAAATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............GATTGAAACTTT---------------------------GGCAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
......CAGCTGAGGATTGAAACTTT---------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
..........TGAGGATTGAAACTTT---------------------------GGCAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................AATCATAAACTTAAGTAAGCACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010000000000000000000000000000000000000000000000000000000000
..ATCACAGCTGAGGATTGAAACTTT---------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
AAATCACAGCTGAGGATTGAAACTTT---------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................TGAAACTTT---------------------------GGCAAATCATAAACTTAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
......................................................GCAAATCATAAACTTAAGTAAGCACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000100000000000000000000000
...TCACAGCTGAGGATTGAAACTTT---------------------------GGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................CATAAACTTAAGTAAGCACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
......................................................GCAAATCATAAACTTAAGTAAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
droMoj3
AAATCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAATCCCAGCTGAGGATCGAGACTGTTG---------------------GCA------ATAATAAACTCAAGTAAACGAATT--TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CCAGCTGAGGATCGAGACTGTTG---------------------GCA------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101

Generated: 05/18/2015 at 10:02 PM