ID:

dsi_27427

 Coordinate:

2r:8731797-8732072 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.8 -45.8 -45.6

Flybase annnotation

five_prime_UTR [2r_8732036_8732371_+]; exon [2r_8732036_8732635_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#######################################################################################
AGATGGCGCCTATTACGATTTAAGGTGTGGAGACACTGTGACAACTAGCGGTAAGCAAAAGCTCAGTTATATTTTTTTTTAATTATAATTTATATATTCATGCACTATGCAAGAGTGCTAAAGGTTGTATCATTTAAACAGAAACCTATCAAATTCTGACCTTATTGTTAGTTGTTATCCTGTTTTCATTTAATGAATTTCAAATTTAAAATATTTTTGTAAGCAATTTTAAGCTGGGGCAAGGGTTTGTGTCGCGGCTAGTGTAAGCAGTCAACTTGCGGTATTTTTTAGTACATTTCACTCCATTCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTTCCAGCGGATTGTCCAAAAAATAACATTAAAA
**************************************************.........(((((((.................((((((((.(((((((.((((...)))).))))).)).))))))))(((((.(((..(((((..........(((((......)))))..........)))))..))))))))....((((..((...))..))))............(((((.((((........)))).)))))..((((((.......))))))(((((....))))).............)))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M025
embryo
............................................................................................................................................................................................................................................................................................................................ATATTCGCAGGCTATACTC......................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................TTCCAGCGGATTGTAAAAAAAATA......... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TATACTCCACACTGCTTCCAGCGGA....................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CCACACTGCTTCCAGCGGATTG.................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................GGATTGTCCAAAAAATAACATTAAAA 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TGTGTCGCGGCTAGTGTAAGCAGT......................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................TGGAGCCACTGTGGCAACTA......................................................................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................ATATATTCGCAGGCTATACTC......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................ACACTGCTTCCAGCGGATTGT................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................GTTATATAATCGCAAGCTAT............................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CTGCTTCCAGCGGATTGT................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CCACACTGCTTCCAGCGGATTGT................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................TCAGTTATAGTTTTTTTGA....................................................................................................................................................................................................................................................................................................... 19 2 6 0.83 5 0 0 4 0 0 1 0 0 0
................................................................................................................................................................CTTATTGTTAGTTGCTA....................................................................................................................................................................................................... 17 1 4 0.25 1 0 0 0 1 0 0 0 0 0
...............................................................CAGTTATAGTTTTTTTGA....................................................................................................................................................................................................................................................................................................... 18 2 13 0.23 3 0 0 3 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................GTGTAAGCGGTCAAGTAGC................................................................................................. 19 3 10 0.20 2 1 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................CCGGGTCGTGTAAGCAGTC........................................................................................................ 19 3 6 0.17 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................CGGGTCGTGTAAGCGGTCA....................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................TCGTGTAAGCAGTCGA...................................................................................................... 16 2 20 0.10 2 0 0 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................CGGGTCGTGTAAGCAGTCG....................................................................................................... 19 3 11 0.09 1 0 0 0 0 0 0 1 0 0
..............................................................TCAGTTATATTTTGTT.......................................................................................................................................................................................................................................................................................................... 16 1 17 0.06 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................................................................................................................................CAGCAGATTGTACAAAAAAAA......... 21 3 19 0.05 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................CAAGGGTTCCTGTCGCGA....................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0
....................................TGAGACAAGTAGCGGT.................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................TCCTGTTTTCTTTTAA....................................................................................................................................................................................... 16 1 20 0.05 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCTACCGCGGATAATGCTAAATTCCACACCTCTGTGACACTGTTGATCGCCATTCGTTTTCGAGTCAATATAAAAAAAAATTAATATTAAATATATAAGTACGTGATACGTTCTCACGATTTCCAACATAGTAAATTTGTCTTTGGATAGTTTAAGACTGGAATAACAATCAACAATAGGACAAAAGTAAATTACTTAAAGTTTAAATTTTATAAAAACATTCGTTAAAATTCGACCCCGTTCCCAAACACAGCGCCGATCACATTCGTCAGTTGAACGCCATAAAAAATCATGTAAAGTGAGGTAAGACCCAATATATAAGCGTCCGATATGAGGTGTGACGAAGGTCGCCTAACAGGTTTTTTATTGTAATTTT
**************************************************.........(((((((.................((((((((.(((((((.((((...)))).))))).)).))))))))(((((.(((..(((((..........(((((......)))))..........)))))..))))))))....((((..((...))..))))............(((((.((((........)))).)))))..((((((.......))))))(((((....))))).............)))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
...................................................................................................................................................TAGTTTGAGAGTGGAATAA.................................................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................AACACTCAACAATAGGAAAA................................................................................................................................................................................................ 20 2 3 0.33 1 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................................AGGAAGGTCGCCTAA..................... 15 1 12 0.17 2 0 0 2 0 0
..........................................................................................................................................................................................................................................................................................................................................................ATCGCCTAACAGGTT............... 15 1 11 0.09 1 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................................AAAGTGAGGGAAGGCCCCA.............................................................. 19 3 12 0.08 1 0 0 1 0 0
...................................................................................................................................................TAGTTGAAGACTTGAGTAA.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8731747-8732122 + dsi_27427 AGATGGCGCCTATTACGATTTAAGGTGTGGAGACACTGT-GACAACTAGCGGTA---------------------------------------------------------------------------------------------------------AGCAAAAGCTCAGTTATATTTTTTTTTAA------------------------TTATAATTTATATATTCATGCACTATGCAA--------------------------------------------------------------------------------------------------------------------------------------------GAGTGCTAAA-----------------------------GGTTGTATCATTTA-AACAGAAACCTATCAAATTCTGACCTTATTGTTA-----------------G---TTG----------------------------TTA-TCCTGTTTTCATTTAA-TGAATTTCAAATTTA-AAATATTTTTGTAAGCAATTTTAA------GCTGGGG---------------CAAGGGTTTGTGTCGCGGCTAGT--GTAAGCAGTCAACTTGCGGTATTTTTTAGTACATTT-CACTCCATTCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTTCCAGCG--GATTGTC-CAAAA-------AATAACA-------TTAAAA
droSec2 scaffold_1:5572938-5573310 + AGATGGCGCCTATTACGATTAAAGGTGTGGAGACACTGT-GACAACTAGCGGTA---------------------------------------------------------------------------------------------------------AGCAAAAGCTCAGTTATATATT-----------------------TTTTTTAATTATAATTTATATATTCAGGCACTATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GAGTGCTGGA-----------------------------GGTTGTATCATTTA-AACAGAAACCTATCAAATTCTGACCTTATTGTTA-----------------G---TT-------------------------------A-TCCTGTTTTCATTTTA-TGAATTTCAAATTTA-AAATATTTTTGTAAGCAATTTTAA------GCTGGGG---------------CAAGGGTTTGTGTCGCGGCTAGT--GTAAGCAGTCGATTTGCGGCATTTTTTAGTACATTT-CACTCCATTCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTT-CAGCG--GATTGTC-CAAAA-------AATAACA-------TTAAAG
dm3 chr2R:8027802-8028197 + AGATGGCGCCTATTACAGTTAATGGTGTGGAGACACTGT-GACAGCTAGCGGTA---------------------------------------------------------------------------------------------------------AACAAAAGCTCAGTTATATTTTTTTATAATGTATATATATATATTTTTTTTAAACA-----TATATATTTTGGCACAATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GCGTGCTGGG-----------------------------CGTTGTATTATTTA-AACAGAAACCTACAAAATTCTGCCTTTATAGTTA-----------------G---TTT----------------------------TTA-TCCTGTTTTTATTTAA-TGAATTTCAAATTTC-AAATATTTTTGTAAACAATTTTAA------GCTAGGC---------------CAAGGGTTTGTGTCGCGGCTAGT--GCAAGCAGTCAACTTGCGGCATTTTTTAGTACATTT-CCCTCTGTGCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTTCCAGCG--GAATCGTCAAAAA-------AATAACA-------TTAAAA
droEre2 scaffold_4845:17766299-17766780 - AGATGGCGCCTTTTACAATTAACGGTATGGAAACACTGT-GACAACTAGCAGCA---------------------------------------------------------------------------------------------------------A--AAAAGCTCAGTTTTATTTCTTTCAAATATG---------------------------------------CTA-------AAATTATAATTGATTTTACTTTCAATTAATCAACCCATATTTACGTGGCACGTTTTAAATATAATTCTAGCTGGGCCTGCAAATAAAAGTTTTCCCAATCGGATGTA------ACCA--CTGTGGATCCACTTTAATATTTACGATCTCTA-----------------------------CATTGTATTCTTTG-AACAGAAATCTATAAATCTCTGATTTTATTCTTA-----------------G---TTA----------------------------T-ATT-CATTTTTCATTTGA-TGAATTTGGAATTAA-TATTATCTCCGTGAAAATTTGAAA------GCAAACC---------------CAAAGGTTTGTGAACCGGCTAGTAGCCAAGCAGTCGACTTGCGGCATTTTTTAGGGGATTT-T-TTCAATGCAGCGTTAATTATTCGCAGGCTA-ACTCCACACTGCTTCCAGCG--GATTGGC-AA-AA-------AATAACA-------TTAAAA
droYak3 2R:8923340-8923830 - AGATGGCGCCCTTTTCGGTTAACGGTGTGGAGACACTGT-GCCAACTAGCGGTA---------------------------------------------------------------------------------------------------------TATAAAAGCTCAGTTATATTTCCTTTAAATATG-----------------------------------------------CAAACTTATAATTTATGTT-CTTTTATTTAATCAATGCATAATAACGTATAACCTTTTAAATTTAATTTTAATTAATGTTGCAAGTATAAGTATTCTCAATCGAATGTATAGAAAACTATCCCATGGAA-CACTTTAGTATTTACGTGCGAGA-----------------------------CGTTGTGTCCTTTG-AACAGAAAACTACAAGACACTGAGATTATTGTTA-----------------G---TTA----------------------------TTA-TCCTTCTAACTCTTAT-TTAATTTCGAGTTAAAAAATAGTTATGTAAAAAATTAATA------GCAAGCC---------------CTAAGGTTTGTGTCCCGGCTAGT--GCAAGCAGTTTACTTGCGGCATTTTTTAGGGCATTT-CACACGATGCAGCGTTAATTATTCGCAGGCTATACTCCACACTGCTTTCAGCG--GATTGGC-AA-AA-------AATAACA-------TTAAAA
droEug1 scf7180000409462:435697-436051 - AAATGGCGCCAATTAGTCTTTGTGGTGTGCAAACATTGC-GACGTCTCGAGGCAGCCACTTAAGGAGGAGACATGTAAATGTATAATGTAATGTTAAAATAATAAAGTTATCCAATGAATTTTAAAGTAAGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTTCCTTTAATCAATTGTT----TATTTTTT-------------AT-GTA-CATATTTTG--------------------------------TTATGAAAAACTAAAAATATTTTATCA--TTAATTGCATTCATTCAGGTGTGAGTCTTGGATAAC--ACAAGTAATTATTTATTGGTATTTTTTAGTATATTTTTATAAGATGCAGGGTTAATTATTTGTAGGCTACACTCCACACTGCTTCCAGCG--GATTGGC-AA-AA-------AATAACA-------TTAAAA
droBia1 scf7180000302292:843260-843577 + AGTTAGCGCCTAACACGGTTTCTGGTGTGCAAACACTGCTGATTT-----------------------------------------------------------------------------CAAAG---GCCTAATTCTAATTGAAACAAAAGCATTAAGCAAACAC-TACTTAAT-TTGAGTATCATCAG---------------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGTTTTGTTATCAG---TTGTTTGTCTCTTT--T-------------AT-TTA-TTTACATTT--------------------------------TTACATAAATCTAA--------------AAT-A-----AACTTTTGGGTGTGTGTCCTCGCTAGG--GCACGCAACTATTCCGCGGTATTTTTTAGTTCATTT-CCTTGAATGCAGGGTTAATTATTCGCAGGCTACACTCCACACTGCTTCCAGCG--GATTGGC-AAAAA-------AATAACA-------TTAAAA
droTak1 scf7180000415260:216559-216880 - AGATGGCGCCAAA-AGGGTTTCTGATGTGCAAACACTGCTGATTTCTAA------------------------------------------------------------------ATAATTTCAAAG---G--------------------------TAAGTAAAGA-ATAGTTTAA-AAGATTAAAATATG---------------------------------------GAA-------AAATTAAA-------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------TGTTAATTTTCCTTTCAGTAATTTTC----TGTTTTTTCCAAATTTAT-----------------AA-TTAT-AGAAT-TCA--------------------AATAATTATAT------TTCAGCA--CAAA-----AACTTTTGGGTGTGTGTCCCGGCTAAC--GCA-----CTAGCTCGCGGTATTTTTTAGTGCATTT-CGAGCGTCGCAGGGTTAATTATTTGCAGGCTACACTCCACACTGCTTCCAGCG--GATTGGC-AAAAA-------AATAACA-------TTAAAA
droEle1 scf7180000491214:3559235-3559278 + AGATGCCGCCAATATAGACTTTTGGTGTGTAAGCACTGC-GACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779932:466339-466462 + T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCCTGGCTAAG--GCAAGCTCAAATTCGTTGGTATATTTTAGTACATTCGCCGGCAATGCGGGGTTAATTATTGGTGGGCTATA--CCACACTA---CCAGCG--GATTCGC-AA-AA-------AATAACA-------TTTTAA
droFic1 scf7180000453809:425357-425757 + AGATGGCGCCAAAGA---------------AAGCACTCA-GAAAAATA-----------------------------------------------------------------------------------------------------------------------------------TA-------------------TATATTAAACAAACA-----AATAAAGCTTGAAAATAATCTA----------------------GATTAA----------AATTCAAGGCAAATTTTTCA-AAAAT------------------------------------------------------------TG-TATTTTGGTATTAAACTGCGAAACGAGATCTAACAGACGCATTATTATTGTT-TACGAATTATTTTTATAGGAGACCTACACGTATATGTCAATAAAAATATGTACATTTTC-------------------------TTCCAAATTTGTTCTAT-ATT-TATTTTTTGTTTGAGTTAACT--------------------TTAAACAAAACTAA------CCAACTGCAAG-A-----AAATTTTTGGTGTGTGTCCCAACTAAC--GCAAGCTAGAATCTGGCAGTATTTTTTAGTCAATTT-CCTGCAATGCGGGGTTAGCT------------------------------ACG--GATTGGC-AAAAAAAAAGAGAATAAAATAA------ATAA
droKik1 scf7180000302682:1029504-1029554 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTGCACATC-CCTATTG--GATTGGC-CAGAAAAAT---AAAAACT-------TTTAAA
droAna3 scaffold_13266:2597436-2597476 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCGGAGATTTGGCCAGAAA-ATATAAATAACA-------TTTTAA
droBip1 scf7180000396427:1083815-1083854 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCGGAGATTGGC-CAGGAA-ATATAAATAACA-------TTTTAA
dp5 3:14356383-14356486 + TATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------T-ATT----------------------------------------------------------------------------------------------------------------------------TTGGTATATTTCGGT-------------------------ATATTCGTAGTGTCGGACGGTCACTGCT---AGCGAAGATTGGC-CAAAAAAAAATAAATAAAAAAAATACATAAAA
droPer2 scaffold_4:3249596-3249719 - AGCTCGTTTTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------T-ATT------------------------------------------------------------------------------------------------TTG-----------------AGAATGAGATGGTATATTTCGGTA-------------------------TATTCGTAGTGTCGGACGGTCACTGCT---AGCGAAGATTGGC-CAAAAAAAAATAAATAAAAAAAATACATAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGATGGCGCCTATTACGATTTAAGGTGTGGAGACACTGT-GACAACTAGCGGTA---------------------------------------------------------------------------------------------------------AGCAAAAGCTCAGTTATATTTTTTTTTAA------------------------TTATAATTTATATATTCATGCACTATGCAA--------------------------------------------------------------------------------------------------------------------------------------------GAGTGCTAAA-----------------------------GGTTGTATCATTTA-AACAGAAACCTATCAAATTCTGACCTTATTGTTA-----------------G---TTG----------------------------TTA-TCCTGTTTTCATTTAA-TGAATTTCAAATTTA-AAATATTTTTGTAAGCAATTTTAA------GCTGGGG---------------CAAGGGTTTGTGTCGCGGCTAGT--GTAAGCAGTCAACTTGCGGTATTTTTTAGTACATTT-CACTCCATTCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTTCCAGCG--GATTGTC-CAAAA-------AATAACA-------TTAAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCAGGCTATACTC..........................................................1911.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTCCACACTGCTTCCAGCG--GA......................................2511.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACACTGCTTCCAGCG--GATTG...................................2211.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--GATTGTC-CAAAA-------AATAACA-------TTAAAA2611.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGCGGCTAGT--GTAAGCAGT...........................................................................................................................2411.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCGCAGGCTATACTC..........................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGCTTCCAGCG--GATTGT..................................2111.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTCCAGCG--GATTGT..................................1811.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACACTGCTTCCAGCG--GATTGT..................................2311.00110000000000000000
droSec2
AGATGGCGCCTATTACGATTAAAGGTGTGGAGACACTGT-GACAACTAGCGGTA---------------------------------------------------------------------------------------------------------AGCAAAAGCTCAGTTATATATT-----------------------TTTTTTAATTATAATTTATATATTCAGGCACTATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GAGTGCTGGA-----------------------------GGTTGTATCATTTA-AACAGAAACCTATCAAATTCTGACCTTATTGTTA-----------------G---TT-------------------------------A-TCCTGTTTTCATTTTA-TGAATTTCAAATTTA-AAATATTTTTGTAAGCAATTTTAA------GCTGGGG---------------CAAGGGTTTGTGTCGCGGCTAGT--GTAAGCAGTCGATTTGCGGCATTTTTTAGTACATTT-CACTCCATTCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTT-CAGCG--GATTGTC-CAAAA-------AATAACA-------TTAAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTATACTCCACACTG...................................................1811.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTGCTT-CAGCG--GATTGT..................................2111.0010100
dm3
AGATGGCGCCTATTACAGTTAATGGTGTGGAGACACTGT-GACAGCTAGCGGTA---------------------------------------------------------------------------------------------------------AACAAAAGCTCAGTTATATTTTTTTATAATGTATATATATATATTTTTTTTAAACA-----TATATATTTTGGCACAATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GCGTGCTGGG-----------------------------CGTTGTATTATTTA-AACAGAAACCTACAAAATTCTGCCTTTATAGTTA-----------------G---TTT----------------------------TTA-TCCTGTTTTTATTTAA-TGAATTTCAAATTTC-AAATATTTTTGTAAACAATTTTAA------GCTAGGC---------------CAAGGGTTTGTGTCGCGGCTAGT--GCAAGCAGTCAACTTGCGGCATTTTTTAGTACATTT-CCCTCTGTGCTGGGTTATATATTCGCAGGCTATACTCCACACTGCTTCCAGCG--GAATCGTCAAAAA-------AATAACA-------TTAAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTCGCGGCTAGT--GCAAGCAGT...........................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------CAAGGGTTTGTGTCGCGGCTAGT--GC..................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTCAAAAA-------AATAAC..............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA------GCTAGGC---------------CAAGGGTTTGTG.................................................................................................................................................2512.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGCGGCTAGT--GCAAGCAGT...........................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCG--GAATCGTCAAAAA-------AATAA...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAATTTTAA------GCTAGGC---------------CAA..........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTCGCGGCTAGT--GCAAGCAG............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA------GCTAGGC---------------CAAGGGTTTGT..................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTGGCACAATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GCGTGCTGGG-----------------------------C..........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA------GCTAGGC---------------CAAGGGTTTGTGTC...............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCG--GAATCGTCAAAAA-------AA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTGGCACAATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GCGTG.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCAGCG--GAATCGTCA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTTCCAGCG--GAATCGTCAAAAA-------AAAT................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCCACACTGCTTCCAGCG--GAATCG..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA------GCTAGGC---------------CAAGGGT......................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGCGGCTAGT--GCAAGCAG............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGGCTAGT--GCAAGCAGTCAACT......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATATTCGCAGGCTAT..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTCCACACTGCTTCCAGCG--GA......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCAGGCTATACTCCAC.......................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACACTGCTTCCAGCG--GAATCGTC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG--GAATCGTCAAAAA-------AATAAC..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGCGGCTAGT--GCAAGCAGTC..........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTGGCACAATTCAA--------------------------------------------------------------------------------------------------------------------------------------------GCGTGCTGGG-----------------------------CGT........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGGC---------------CAAGGGTTTGTGTCGCGG...........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGCGGCTAGT--GCAAGCA.............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGCGGCTAGT--GCAAGCAGT...........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGATGGCGCCTTTTACAATTAACGGTATGGAAACACTGT-GACAACTAGCAGCA---------------------------------------------------------------------------------------------------------A--AAAAGCTCAGTTTTATTTCTTTCAAATATG---------------------------------------CTA-------AAATTATAATTGATTTTACTTTCAATTAATCAACCCATATTTACGTGGCACGTTTTAAATATAATTCTAGCTGGGCCTGCAAATAAAAGTTTTCCCAATCGGATGTA------ACCA--CTGTGGATCCACTTTAATATTTACGATCTCTA-----------------------------CATTGTATTCTTTG-AACAGAAATCTATAAATCTCTGATTTTATTCTTA-----------------G---TTA----------------------------T-ATT-CATTTTTCATTTGA-TGAATTTGGAATTAA-TATTATCTCCGTGAAAATTTGAAA------GCAAACC---------------CAAAGGTTTGTGAACCGGCTAGTAGCCAAGCAGTCGACTTGCGGCATTTTTTAGGGGATTT-T-TTCAATGCAGCGTTAATTATTCGCAGGCTA-ACTCCACACTGCTTCCAGCG--GATTGGC-AA-AA-------AATAACA-------TTAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AGATGGCGCCCTTTTCGGTTAACGGTGTGGAGACACTGT-GCCAACTAGCGGTA---------------------------------------------------------------------------------------------------------TATAAAAGCTCAGTTATATTTCCTTTAAATATG-----------------------------------------------CAAACTTATAATTTATGTT-CTTTTATTTAATCAATGCATAATAACGTATAACCTTTTAAATTTAATTTTAATTAATGTTGCAAGTATAAGTATTCTCAATCGAATGTATAGAAAACTATCCCATGGAA-CACTTTAGTATTTACGTGCGAGA-----------------------------CGTTGTGTCCTTTG-AACAGAAAACTACAAGACACTGAGATTATTGTTA-----------------G---TTA----------------------------TTA-TCCTTCTAACTCTTAT-TTAATTTCGAGTTAAAAAATAGTTATGTAAAAAATTAATA------GCAAGCC---------------CTAAGGTTTGTGTCCCGGCTAGT--GCAAGCAGTTTACTTGCGGCATTTTTTAGGGCATTT-CACACGATGCAGCGTTAATTATTCGCAGGCTATACTCCACACTGCTTTCAGCG--GATTGGC-AA-AA-------AATAACA-------TTAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................ATAGAAAACTATCCCATGGAA-C..............................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEug1
AAATGGCGCCAATTAGTCTTTGTGGTGTGCAAACATTGC-GACGTCTCGAGGCAGCCACTTAAGGAGGAGACATGTAAATGTATAATGTAATGTTAAAATAATAAAGTTATCCAATGAATTTTAAAGTAAGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTTCCTTTAATCAATTGTT----TATTTTTT-------------AT-GTA-CATATTTTG--------------------------------TTATGAAAAACTAAAAATATTTTATCA--TTAATTGCATTCATTCAGGTGTGAGTCTTGGATAAC--ACAAGTAATTATTTATTGGTATTTTTTAGTATATTTTTATAAGATGCAGGGTTAATTATTTGTAGGCTACACTCCACACTGCTTCCAGCG--GATTGGC-AA-AA-------AATAACA-------TTAAAASizeHit CountTotal NormTotal
No Reads
droBia1
AGTTAGCGCCTAACACGGTTTCTGGTGTGCAAACACTGCTGATTT-----------------------------------------------------------------------------CAAAG---GCCTAATTCTAATTGAAACAAAAGCATTAAGCAAACAC-TACTTAAT-TTGAGTATCATCAG---------------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGTTTTGTTATCAG---TTGTTTGTCTCTTT--T-------------AT-TTA-TTTACATTT--------------------------------TTACATAAATCTAA--------------AAT-A-----AACTTTTGGGTGTGTGTCCTCGCTAGG--GCACGCAACTATTCCGCGGTATTTTTTAGTTCATTT-CCTTGAATGCAGGGTTAATTATTCGCAGGCTACACTCCACACTGCTTCCAGCG--GATTGGC-AAAAA-------AATAACA-------TTAAAASizeHit CountTotal NormTotal
No Reads
droTak1
AGATGGCGCCAAA-AGGGTTTCTGATGTGCAAACACTGCTGATTTCTAA------------------------------------------------------------------ATAATTTCAAAG---G--------------------------TAAGTAAAGA-ATAGTTTAA-AAGATTAAAATATG---------------------------------------GAA-------AAATTAAA-------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------TGTTAATTTTCCTTTCAGTAATTTTC----TGTTTTTTCCAAATTTAT-----------------AA-TTAT-AGAAT-TCA--------------------AATAATTATAT------TTCAGCA--CAAA-----AACTTTTGGGTGTGTGTCCCGGCTAAC--GCA-----CTAGCTCGCGGTATTTTTTAGTGCATTT-CGAGCGTCGCAGGGTTAATTATTTGCAGGCTACACTCCACACTGCTTCCAGCG--GATTGGC-AAAAA-------AATAACA-------TTAAAASizeHit CountTotal NormTotal
No Reads
droEle1
AGATGCCGCCAATATAGACTTTTGGTGTGTAAGCACTGC-GACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCCTGGCTAAG--GCAAGCTCAAATTCGTTGGTATATTTTAGTACATTCGCCGGCAATGCGGGGTTAATTATTGGTGGGCTATA--CCACACTA---CCAGCG--GATTCGC-AA-AA-------AATAACA-------TTTTAASizeHit CountTotal NormTotal
No Reads
droFic1
AGATGGCGCCAAAGA---------------AAGCACTCA-GAAAAATA-----------------------------------------------------------------------------------------------------------------------------------TA-------------------TATATTAAACAAACA-----AATAAAGCTTGAAAATAATCTA----------------------GATTAA----------AATTCAAGGCAAATTTTTCA-AAAAT------------------------------------------------------------TG-TATTTTGGTATTAAACTGCGAAACGAGATCTAACAGACGCATTATTATTGTT-TACGAATTATTTTTATAGGAGACCTACACGTATATGTCAATAAAAATATGTACATTTTC-------------------------TTCCAAATTTGTTCTAT-ATT-TATTTTTTGTTTGAGTTAACT--------------------TTAAACAAAACTAA------CCAACTGCAAG-A-----AAATTTTTGGTGTGTGTCCCAACTAAC--GCAAGCTAGAATCTGGCAGTATTTTTTAGTCAATTT-CCTGCAATGCGGGGTTAGCT------------------------------ACG--GATTGGC-AAAAAAAAAGAGAATAAAATAA------ATAASizeHit CountTotal NormTotal
No Reads
droKik1
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTGCACATC-CCTATTG--GATTGGC-CAGAAAAAT---AAAAACT-------TTTAAASizeHit CountTotal NormTotal
No Reads
droAna3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCGGAGATTTGGCCAGAAA-ATATAAATAACA-------TTTTAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCGGAGATTGGC-CAGGAA-ATATAAATAACA-------TTTTAASizeHit CountTotal NormTotal
No Reads
dp5
TATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------T-ATT----------------------------------------------------------------------------------------------------------------------------TTGGTATATTTCGGT-------------------------ATATTCGTAGTGTCGGACGGTCACTGCT---AGCGAAGATTGGC-CAAAAAAAAATAAATAAAAAAAATACATAAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGGTCACTGCT---AGCGAAGA......................................2412.0020000000200
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACTGCT---AGCGAAGATTGGC-................................2211.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACTGCT---AGCGAAGATT....................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCACTGCT---AGCGAAGAT.....................................2011.0010000000010
droPer2
AGCTCGTTTTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------T-ATT------------------------------------------------------------------------------------------------TTG-----------------AGAATGAGATGGTATATTTCGGTA-------------------------TATTCGTAGTGTCGGACGGTCACTGCT---AGCGAAGATTGGC-CAAAAAAAAATAAATAAAAAAAATACATAAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCACTGCT---AGCGAAGATTGGC-C...............................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACGGTCACTGCT---AGCGAAG.......................................2211.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---AGCGAAGATTGGC-CAAAA...........................2011.001100000

Generated: 05/19/2015 at 12:36 PM