ID:dsi_2739 |
Coordinate:3l:8210133-8210200 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_8208678_8210132_-]; CDS [3l_8208678_8210132_-]; CDS [3l_8210201_8210431_-]; exon [3l_8210201_8210431_-]; intron [3l_8210133_8210200_-]
No Repeatable elements found
| ##################################################--------------------------------------------------------------------################################################## AAAATGGTCATCGTGTGGTCACCGCAGCTAGAGGGACTGCTCAAGTATTCGTGAGTCGCCAGCATACTTGCAATAAATTCCAGTTTATCGTAGTGATTAAATATAATTTCATTCATAGGCACGGTGACTCCATACAGTGCATGAGCTTCAATCCTGTTTCGCACCACC **************************************************...((((((.........(((.((((((....)))))).)))))))))....................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR902008 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| ............................................GTATTCGTGAGTCGCCAGCA........................................................................................................ | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..............................................ATTCGTGAGTCGCCAGCA........................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................TTCGATCCTCTTTGGCACCA.. | 20 | 3 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| .....................................................................................................................................................AATCCTGTTTCCGACCA.. | 17 | 2 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| .AAATGGTTATGGTGAGGTCA................................................................................................................................................... | 20 | 3 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 |
|
TTTTACCAGTAGCACACCAGTGGCGTCGATCTCCCTGACGAGTTCATAAGCACTCAGCGGTCGTATGAACGTTATTTAAGGTCAAATAGCATCACTAATTTATATTAAAGTAAGTATCCGTGCCACTGAGGTATGTCACGTACTCGAAGTTAGGACAAAGCGTGGTGG
**************************************************...((((((.........(((.((((((....)))))).)))))))))....................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
GSM343915 embryo |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................ACGTACTCGCAGTTAGAAC............ | 19 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................GCACGTACTCGCAGTTAG............... | 18 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................ACGTACTCGCAGTTAG............... | 16 | 1 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................ACGTACTCGCAGTTA................ | 15 | 1 | 4 | 0.75 | 3 | 2 | 1 | 0 | 0 | 0 |
| .........................................................................................................................................ACGTACTCGCAGTTAGAA............. | 18 | 2 | 4 | 0.50 | 2 | 0 | 2 | 0 | 0 | 0 |
| ........................GTCGTTCTCCCTGCCGAGGTCA.......................................................................................................................... | 22 | 3 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................AGCACGTACTCGCAGTTAG............... | 19 | 3 | 8 | 0.38 | 3 | 3 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................CACGTACTCGCAGTTAGA.............. | 18 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................ACGTACTCGCAGTTAGA.............. | 17 | 2 | 8 | 0.25 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................CGTACTCGCAGTTAGAAC............ | 18 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................AGCACGTACTCGCAGTTA................ | 18 | 3 | 20 | 0.20 | 4 | 4 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................GCACGTACTCGCAGTTAGA.............. | 19 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................ATCCGTGCCGCTGATG..................................... | 16 | 2 | 14 | 0.14 | 2 | 0 | 2 | 0 | 0 | 0 |
| ................................................AGCACTCAGCGGACG......................................................................................................... | 15 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................................................................................................ACGTACTCGCAGTCATGAC............ | 19 | 3 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................TAAGTACTCAGTGGTCG......................................................................................................... | 17 | 2 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................CCCACTGAGGAATGTGACG............................ | 19 | 3 | 17 | 0.06 | 1 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................................................AGGTATGTAACGTAC......................... | 15 | 1 | 17 | 0.06 | 1 | 0 | 0 | 0 | 1 | 0 |
| ......................................CGATTTCATAAGCTCTCAT............................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:45 AM