dsi_27344

CTTCTAGATCCTTGAGTTCCTTGAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCTCATTGAATTCGCACTGTAATGATGGGAACTTGAAACCAGTCTAATGCCAATTTCCTTATCCGTTCTGTTTTCTCTCTCTCGTTTTTTTATTTGTTTGTTTATCTCTTCGACTCTCTTCCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT ************************************************.((((((.....(((((..(((..((((.(((((((....((((.(((.........................))).))))....)))))))...)))).)))..)))))..................))))))................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR902008 ovaries	GSM343915 embryo	SRR553486 Makindu_3 day-old ovaries	M024 male body	O002 Head	M053 female body
...........................TTCCGAGTTCCCTGGA...............................................................................................................................................................................................................	16	1	4	0.75	3	2	0	0	0	1	0	0	0
.........................................................................................................................TTCTGTTGTCTCTTTATCGTTTTT.........................................................................................................	24	3	3	0.67	2	0	0	2	0	0	0	0	0
..........................................................................................................................................................TGTTTATCTCTCTGACTCTTTTC.........................................................................	23	3	2	0.50	1	1	0	0	0	0	0	0	0
.........................................................................TGCAATGATGAGAACTTAAAAC...........................................................................................................................................................	22	3	3	0.33	1	0	0	0	1	0	0	0	0
.....................................................................................................................................................TTGTTTGTTTATCTC......................................................................................	15	0	4	0.25	1	0	1	0	0	0	0	0	0
...........................................................CATAGAATTCTCACTGTGAT...........................................................................................................................................................................	20	3	4	0.25	1	1	0	0	0	0	0	0	0
.........................................................................................................................CTCTGTTTTCTCTCTCTC...............................................................................................................	18	1	6	0.17	1	0	0	0	0	0	0	1	0
....................TTGAGTTTCCCGAGTTGCG...................................................................................................................................................................................................................	19	2	6	0.17	1	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................TTTAAAGACGGACTCAATC......................................	19	3	16	0.13	2	0	0	0	0	0	2	0	0
.........................................................................TTCAATGATGGGAACTTG...............................................................................................................................................................	18	2	8	0.13	1	0	1	0	0	0	0	0	0
..........................................................................GTAATGGTGGGAACT.................................................................................................................................................................	15	1	9	0.11	1	1	0	0	0	0	0	0	0
......................GAGTTTCCCGGGTTC.....................................................................................................................................................................................................................	15	1	10	0.10	1	0	1	0	0	0	0	0	0
....................ATGAGTTTCGCGAGTTC.....................................................................................................................................................................................................................	17	2	12	0.08	1	1	0	0	0	0	0	0	0
..........................................................................................................................TCAGTTTTCTCTCTCTCCTAT...........................................................................................................	21	3	13	0.08	1	0	0	0	0	0	0	0	1
.........................CTTTCCGAGTTCCCTGGA...............................................................................................................................................................................................................	18	2	13	0.08	1	1	0	0	0	0	0	0	0
.........CCTTGAGTTCCCTGA..................................................................................................................................................................................................................................	15	1	16	0.06	1	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................AGGTCGGCTTCCTGTGTC...................	18	3	20	0.05	1	0	0	0	0	0	1	0	0
.....................................................................................................................................................TTGTTTGTTTATCTCA.....................................................................................	16	1	20	0.05	1	0	1	0	0	0	0	0	0

GAAGATCTAGGAACTCAAGGAACTCAAAGGGCTCAAGGGACCTAAGGCACTCGGCTCGAGTAACTTAAGCGTGACATTACTACCCTTGAACTTTGGTCAGATTACGGTTAAAGGAATAGGCAAGACAAAAGAGAGAGAGCAAAAAAATAAACAAACAAATAGAGAAGCTGAGAGAAGGAAACCGGTTATTATAAAATGTCAGCTTGAGTTAGTTGCAGCCGAAGGACGCAAATAAAGCTCGCCGCGCTGA ************************************************.((((((.....(((((..(((..((((.(((((((....((((.(((.........................))).))))....)))))))...)))).)))..)))))..................))))))................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	SRR902008 ovaries	SRR902009 testis	M024 male body
........................................................................................................................................................................................................AGCTAGAGTTAGTTGC..................................	16	1	4	0.25	1	1	0	0	0	0	0
..............................................................................................................................................................ATGGAGAAGGTAAGAGAAGGA.......................................................................	21	3	6	0.17	1	0	0	0	1	0	0
.................................................................................................................................................................GAGAAACTGAGAGAA..........................................................................	15	1	20	0.15	3	0	3	0	0	0	0
...............................................................................................................................................................................................AAAAAGGTCAGCTTGAGT.........................................	18	2	14	0.07	1	0	0	1	0	0	0
................................TCAAGGCACCTAAGGGA.........................................................................................................................................................................................................	17	2	17	0.06	1	0	1	0	0	0	0
.....................................................................................................................................AGAGAGCGAAAAAATA.....................................................................................................	16	1	19	0.05	1	0	0	1	0	0	0
.................................................................................................................................AGAGAGAGAACAAAAAAA.......................................................................................................	18	1	19	0.05	1	0	0	0	0	1	0
.......................TCAAACGGCTCAAGG....................................................................................................................................................................................................................	15	1	20	0.05	1	0	0	1	0	0	0
.....................AGTAAAACGGCTCAAGGGA..................................................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	x:11224026-11224275 -	dsi_27344	CTTCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-T--TCGCACTGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAG--TCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCTCTC--G--TTT---TTTT--ATTTGTTTG------------TTTA--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT
droSec2	scaffold_53:65193-65444 -		CTTCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGTTTCCCGAGTTCCTTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-T--TCGCACTGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAG--TCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCTCTC--TCGTTT---TTTT--ATTTGTTTG------------TTTA--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT
dm3	chrX:11848265-11848523 -		CTTCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-T--TCGCACCGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAA--TCTAATGCCATTTTCCTTATCCGTTCTGTTTTC----TCTCTCTCTCTCGTTTTTTTTTT--ATTTGTTTG------------TTTATTTCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT
droEre2	scaffold_4690:3329460-3329711 +		CTTCTAGATCC----------------------TTGAGTTCCCC-----------------------------------------GAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCAAGCT-CA-----------------------------------------------AC-GGAAT--TCGCACTGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAG--TCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCCCTC--TCGTTT---TT-T--ATTTGTTTG------------TTTG--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGAGCGGCGCGACT
droYak3	X:14851628-14851926 +		CTTCTAGATCC----------------------TTGAGTTCCCCCAAGTTTCCCCGAGATTCCCCAAGTTTCCCTGAGTTTTCCCGAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-TCTTCGCACTGT--A------ATG------------------------ATG-GGAAAC--------T--TGCAAGCAGTCTCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCTCTC--TCGTTT---TT-T--ATTTGTTTG------------TTTG--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTTCTTCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT
droEug1	scf7180000409008:1240557-1240845 -		CTTCTAGTTCC----------------------TTGAGTTCCTT---------------------ACATTCCCTT----------GAGTCTC------TCCCTCGA-----------GAGCT-CA-----------------------------------------------TC-GAA-A--TTGTATTGC--A-----AAAA-AAGAAGAAGAAAAAAAAACAAAATTG-GGA-AC--------T--T-GAACCTT--TCTAATGCCAATATCCTTATCCATTCTGTTTTC----TCTTTCTC--T--TTT---TTTG--ATTTGTTTA------------CTCC--T----------------T------CCGACACACACACACACACACACTCT--CTCT----------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGACT
droBia1	scf7180000302126:618731-618963 -		CTTCTAGTTCC------------------C---CCGAGCTCCCC-----------------------------------------GAGT-TCCCGGGTTCCC-GGGTTC--------------CA-----------------------------------------------TC-GAA-T--CCGTACTAT---------AAG------------------------ACG-GGA-TC--------G--T-TAACCAG--TCTAATGCCAATTTCCTTATCCATTCTGTTTTC----TCTCTCTC--C--C------C--TTTTTTGTTT----------------------CT---TCGACTC-----T-CT----------------------------CTTC----------------------------------------------------------------------------------------------------------------------CTTTGGT--GTTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGCCT
droTak1	scf7180000414222:60777-61003 +		ATCATAGTTCC----------------------CTGAGATCCCC-----------------------------------------GAGCTCCCAGGGTTCC-----------------------------------------------------------------------TT-GAA-T--CCGTA-TGT--T------AAG------------------------ACG-GAA-AC--------G--T-TAACCAG--TCTAATGCCAATTTCCTTATACATTCTGTTTTC----TCTCTCTC--C--T------C--TTTTTTGTTT----------------------CT---TCGACTCCATTCT-CT----------------------------CTTC----------------------------------------------------------------------------------------------------------------------CT--TTG--GTTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGTCT
droEle1	scf7180000491242:262019-262215 +		CTTCTAGTTCT----------------------TTGA-----------------------------------------------------------------------------GCCGAGCT-CA-----------------------------------------------TC-GAA-T--TCGTA-TGT--T------AAG------------------------ACG-GGA-AC--------G--T-TAACCAG--TCTAATGCCAAATTCCTTATCTGTTCTGTTTTC----TCTCTCTC--T--------------CTTTGTTT----------------------CT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGCCT
droRho1	scf7180000763611:115099-115295 +		CTTCTAGTTCC----------------------TTGA-----------------------------------------------------------------------------GCCGAGCT-CA-----------------------------------------------TG-GAA-T--TCGTA-TGT--T------AAG------------------------ACG-GGA-AC--------G--T-TAACCAG--TCTAATGCCAATTTCCTTATCTGTTCTGTTTTC----TCTCTCTC--T--------------TTTTGTTT----------------------CT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCGGCGCGCCT
droFic1	scf7180000454073:131649-131958 +		CTTTTAGTTCC----------------------ATGGGCTTCTC------------------------------------------------------------CCTTC--------------C-CCACAAAAAAAATAAAAAATAAAAAAAAGAAAGCCC----------ATC-GAA-T--TCGTACTTT---------AAG------------------------ACG-GGA-TC--------G--T-AAACCAG--TCTAATGGCAATTTCCTTATCTGTTCTGTTT-C----TCTCTCTC--T--T------T--CTTTTTGCTTCCTCCCCTCTCTCCCTTTCTCCCT---CTCT-----C------CC----------CACACACACACTCTCTCTCT--------------------------------------------------------------------------------------------CTCTCACT-CCCTCACTCTTGATCGACCATCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGCCT
droKik1	scf7180000302441:127567-127885 +		CGTA-----A--------------------------------------------------------------------------------------------------CCG-AAGCCGAGCTCCA---------------------------------TCG-----GATA-------C-C--CCGTA-TCT--T------AAG------------------------ACG-GGGGAC--------CAATGAAATCAC--TCTAATTCC-GTATCCTTATCTGTTCTGTTTTC----TCTCTCTC--T--------------TTTTGTTT----------------------CT--TTTGACTCTATT------------------------------------CCAAAA-CTTGACTACGAACTTGACTCCAAAAACTCTTCTTCAACAACAACTCAACAACAACAACAACAACTCTCCAACAACTTTAACTCCAACTCGAACTCTCTCGACTCGCA-----ACA-CCA--ACTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGCCTGTTTCGTGCGGCGCGTCT
droAna3	scaffold_12948:325221-325399 -		TATCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CAACCTC--TCTAATGCCAGTCTCTTTGTCTGTTCTGTTCTC----TCTCTCTT--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCAGCGCGTCT
droBip1	scf7180000395801:66590-66770 -		TATCGAGCTCC----------------------TCGAG---------------------------------------------------------------------------------------------------------------------------------------------------------AGA------G--CG----------------------ACGCATA--C-ACCA-CCT--T-CAACCAT--TCTAATTCCAGTCTCTTTATCTGTTCTGTTCTC----TCTCTCTC--T--T------T-------TATTT----------------------TT---ACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTACGTTTGTTTCGTGCGGCGCGTCT
droPer2	scaffold_22:224261-224498 -		TTTCGAGTTCG----------------------AAGAGTTCCCC-----------------------------------------------------------------------------T-CA------------------------AAAAGGGATTCG-----G-----AC-GAA-T--TCACGTTAT--ATTACGAAAA------------------------ACG-GGG-AC-------------AAACCAC--TCTAATACCAATCTCCTTTTCCGTTCTGTTTTC----TCTCT-TC--T--T------T-T-ATTTTGTTT----------------------CT---TCGAATC-----TGCT----------------------------CTTCCAAAAC-------------------------------------------------------AACAACA------------------------------------------------------AAC--CTTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT
droWil2	scf2_1100000004909:10260538-10260872 -		TGATTAAATTTACTAACT---------------CTAATTCTAAT-----------------------------------------TACTATTCCGAGATCGCACGA--------ATTCAATT-AA--------------------------------ACTG----------TTG-GAA-T--TCGTTAAGC--T--ATCTAAG------------------------ACC-TGG-ACCACTACCAC--T-TAACTAC--TCTAATACAAATCTCTCTCTCC---TTGTTTTC----CGTTTCTC--TC---------------------------TTGTCTCTTCTTGTTTCTATTTTGTTTTTA--------------------------------------TG-AAATTATGATTTCCATT-T---------ATCTTTTCT-------------------------------TCTCCTGCGATTATGGTTTTTCTTTTGGTT-TTTTGGTTTTTG-----GTGTCTT--CCTTTGACCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT
droVir3	scaffold_12970:8673764-8673960 -		CCTG-AGATCA----------------TAT---TCGA-----------------------------------------------------------------------------ACTGAGCT-GA---------------AAGGCGTC-------AAT----TTCGAATACATCTGAA-T--TCATT-GGT--A------AAA------------------------ACG-ATA--C-A-----------CCATCAC--TCTAAT-CTACTCTCCTTATT--TTCTGTTTT-----TCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTC--CCTTTGACCAATAATATTTTACAGTCGAACTCAATCAACGTTGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT
droMoj3	scaffold_6473:12682536-12682771 -		CTAA-----AC-------CTGAGACTATATTCGAAGGGTTCCCC------------------------------------------------------------------------------------------------TAGGC----------AACTCGCCTCGAATATATCTGAA-C--TCATC-GGTTTC------A--CA----------------------ACG-ATA--C-A-----------CCATCTC--TCTAA--------------TCTGCTCTCCTTATTTTCTGTTTTTC-TTCGTTT---TT-T--TTCTCTCTC------------TCTTTCTCTCT---CTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCGC--CCTTTGACCAATAATATTTTACAGTCGAACTCAATCAACGTTGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT
droGri2	scaffold_15203:11419559-11419753 -		ATATTCGA----------------------------------------------------------------------------------------------------------ACTGAGCT-GA---------------AAAGCATC-------AAT----TTTGAATACATCTGAA-T--TGGT-CTGT--A------AGGAAC---------------------ACG-GGA--C-A-----------ACATCAC--TCTAATACTATTT-C-----------TCCTTATTTCCTGTTTCTC--G--TTT--------------------------------------------CTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTCT--CCTTTGACCAATAATATTTTACAGTCGAACTCAATC-ACGTCGGCTTCTTGCGTT-G-TTCGTGCGGCCCGTCT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CTTCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-T--TCGCACTGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAG--TCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCTCTC--G--TTT---TTTT--ATTTGTTTG------------TTTA--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................................................................................................................................................................................................................................TTGTTTG------------TTTA--TCTC.............................................................................................................................................................................................................................................................	15	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TTGTTTG------------TTTA--TCTCA---.........................................................................................................................................................................................................................................................	16	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

CTTCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGTTTCCCGAGTTCCTTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-T--TCGCACTGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAG--TCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCTCTC--TCGTTT---TTTT--ATTTGTTTG------------TTTA--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

CTTCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-T--TCGCACCGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAA--TCTAATGCCATTTTCCTTATCCGTTCTGTTTTC----TCTCTCTCTCTCGTTTTTTTTTT--ATTTGTTTG------------TTTATTTCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACTCAATCAACGTCGGCTTCC.........................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTCCTGCGTTTATTTCGAGCGGC......	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTTATTTCGAGCGGCGCGACT	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGTTTATTTCGAGCGGCGCGACT	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAATCAACGTCGGCTTCCTGC......................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTTTACAGTCGAACTCAATCAACG..................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................CTAATGCCATTTTCCTTA.......................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCCTT-----------------------------------------GAGTTTCCCGAGTTCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGAAACCAA--TCTAATGCCATTTTCC..........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................T--ATTTGTTTG------------TTTATTTCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------C..................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAATCAACGTCGGCTTCCTGC......................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TCTAGATCC----------------------TTGAGTTCCTT-----------------------------------------GAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TTTTTT--ATTTGTTTG------------TTTATG.................................................................................................................................................................................................................................................................	21	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCGGCTTCCTGCAA....................	18	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CTTCTAGATCC----------------------TTGAGTTCCCC-----------------------------------------GAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCAAGCT-CA-----------------------------------------------AC-GGAAT--TCGCACTGT--A------ATG------------------------ATG-GGA-AC--------T--TGAAACCAG--TCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCCCTC--TCGTTT---TT-T--ATTTGTTTG------------TTTG--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGAGCGGCGCGACT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

CTTCTAGATCC----------------------TTGAGTTCCCCCAAGTTTCCCCGAGATTCCCCAAGTTTCCCTGAGTTTTCCCGAGTTTCCCGAGTTCCCTGGATTCCGTGAGCCGAGCT-CA-----------------------------------------------TT-GAA-TCTTCGCACTGT--A------ATG------------------------ATG-GGAAAC--------T--TGCAAGCAGTCTCTAATGCCAATTTCCTTATCCGTTCTGTTTTC----TCTCTCTC--TCGTTT---TT-T--ATTTGTTTG------------TTTG--TCTCT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTTCTTCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGACT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTTCTTCTTTGGC..................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................TTCCCGAGTTCCCTGGATTCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CTTCTAGTTCC----------------------TTGAGTTCCTT---------------------ACATTCCCTT----------GAGTCTC------TCCCTCGA-----------GAGCT-CA-----------------------------------------------TC-GAA-A--TTGTATTGC--A-----AAAA-AAGAAGAAGAAAAAAAAACAAAATTG-GGA-AC--------T--T-GAACCTT--TCTAATGCCAATATCCTTATCCATTCTGTTTTC----TCTTTCTC--T--TTT---TTTG--ATTTGTTTA------------CTCC--T----------------T------CCGACACACACACACACACACACTCT--CTCT----------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGACT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CTTCTAGTTCC------------------C---CCGAGCTCCCC-----------------------------------------GAGT-TCCCGGGTTCCC-GGGTTC--------------CA-----------------------------------------------TC-GAA-T--CCGTACTAT---------AAG------------------------ACG-GGA-TC--------G--T-TAACCAG--TCTAATGCCAATTTCCTTATCCATTCTGTTTTC----TCTCTCTC--C--C------C--TTTTTTGTTT----------------------CT---TCGACTC-----T-CT----------------------------CTTC----------------------------------------------------------------------------------------------------------------------CTTTGGT--GTTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATCATAGTTCC----------------------CTGAGATCCCC-----------------------------------------GAGCTCCCAGGGTTCC-----------------------------------------------------------------------TT-GAA-T--CCGTA-TGT--T------AAG------------------------ACG-GAA-AC--------G--T-TAACCAG--TCTAATGCCAATTTCCTTATACATTCTGTTTTC----TCTCTCTC--C--T------C--TTTTTTGTTT----------------------CT---TCGACTCCATTCT-CT----------------------------CTTC----------------------------------------------------------------------------------------------------------------------CT--TTG--GTTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGTCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CTTCTAGTTCT----------------------TTGA-----------------------------------------------------------------------------GCCGAGCT-CA-----------------------------------------------TC-GAA-T--TCGTA-TGT--T------AAG------------------------ACG-GGA-AC--------G--T-TAACCAG--TCTAATGCCAAATTCCTTATCTGTTCTGTTTTC----TCTCTCTC--T--------------CTTTGTTT----------------------CT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGAGCGGCGCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CTTCTAGTTCC----------------------TTGA-----------------------------------------------------------------------------GCCGAGCT-CA-----------------------------------------------TG-GAA-T--TCGTA-TGT--T------AAG------------------------ACG-GGA-AC--------G--T-TAACCAG--TCTAATGCCAATTTCCTTATCTGTTCTGTTTTC----TCTCTCTC--T--------------TTTTGTTT----------------------CT---TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCGGCGCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CTTTTAGTTCC----------------------ATGGGCTTCTC------------------------------------------------------------CCTTC--------------C-CCACAAAAAAAATAAAAAATAAAAAAAAGAAAGCCC----------ATC-GAA-T--TCGTACTTT---------AAG------------------------ACG-GGA-TC--------G--T-AAACCAG--TCTAATGGCAATTTCCTTATCTGTTCTGTTT-C----TCTCTCTC--T--T------T--CTTTTTGCTTCCTCCCCTCTCTCCCTTTCTCCCT---CTCT-----C------CC----------CACACACACACTCTCTCTCT--------------------------------------------------------------------------------------------CTCTCACT-CCCTCACTCTTGATCGACCATCTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTATTTCGTGCGGCGCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CGTA-----A--------------------------------------------------------------------------------------------------CCG-AAGCCGAGCTCCA---------------------------------TCG-----GATA-------C-C--CCGTA-TCT--T------AAG------------------------ACG-GGGGAC--------CAATGAAATCAC--TCTAATTCC-GTATCCTTATCTGTTCTGTTTTC----TCTCTCTC--T--------------TTTTGTTT----------------------CT--TTTGACTCTATT------------------------------------CCAAAA-CTTGACTACGAACTTGACTCCAAAAACTCTTCTTCAACAACAACTCAACAACAACAACAACAACTCTCCAACAACTTTAACTCCAACTCGAACTCTCTCGACTCGCA-----ACA-CCA--ACTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGCCTGTTTCGTGCGGCGCGTCT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TATCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CAACCTC--TCTAATGCCAGTCTCTTTGTCTGTTCTGTTCTC----TCTCTCTT--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCAGCGCGTCT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCAACGTCGGCTTCCTGCGTT...................	25	1	18.00	18	18	0	0	0	0	0
........TCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CC........................................................................................................................................................................................................................................................................................................................................................................	28	1	16.00	16	16	0	0	0	0	0
.................................TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-C..................................................................................................................................................................................................................................................................................................................................................................	28	1	11.00	11	11	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCGAACTCAATCAACGTCGGC.............................	26	1	10.00	10	10	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCGAACTCAATCAACGTCGGCT............................	27	1	8.00	8	8	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAATCAACGTCGGCTTCCTGCGTT...................	26	1	7.00	7	7	0	0	0	0	0
.................................TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-...................................................................................................................................................................................................................................................................................................................................................................	27	1	7.00	7	7	0	0	0	0	0
.....................................................................................................................................................................................................................................................T--T-CAACCTC--TCTAATGCCAGTCTCTTTG.......................................................................................................................................................................................................................................................................................................................................	28	1	5.00	5	5	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCGAACTCAATCAACGTCGGCT............................	25	1	5.00	5	5	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGTCGAACTCAATCAACGTCGGCT............................	29	1	5.00	5	4	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCAACGTCGGCTTCCTGCGTTTG.................	27	1	4.00	4	4	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TT--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGC..................................................................	29	1	4.00	4	4	0	0	0	0	0
.................................................................................................................................................................................................................................................T-CCT--T-CAACCTC--TCTAATGCCAGTCTCT..........................................................................................................................................................................................................................................................................................................................................	28	1	4.00	4	4	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................T---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAA...............................................................	27	1	4.00	4	4	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGC..................................................................	26	1	4.00	4	4	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAATCAACGTCGGCTTCCTGCGTT...................	28	1	4.00	4	4	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAATCAACGTCGGCTTCCTGCG.....................	26	1	3.00	3	3	0	0	0	0	0
..........C----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--.....................................................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
........TCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACC............................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0
........................................................................................................................................................................................................................................TA--C-ACCT-CCT--T-CAACCTC--TCTAATGCCAG...............................................................................................................................................................................................................................................................................................................................................	29	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCTTCCTGCGTTTGTTTCGTGCA........	27	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................................................................................G----------------------ACGCGTA--C-ACCT-CCT--T-CAACCTC--TC........................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................................................................................................................C-ACCT-CCT--T-CAACCTC--TCTAATGCCAGTC.............................................................................................................................................................................................................................................................................................................................................	29	1	3.00	3	3	0	0	0	0	0
...........................................................................................................................................................................................................................................................AACCTC--TCTAATGCCAGTCTCTTTGTC.....................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
.................................TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--.....................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0
TATCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCG.....................................................................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACGTCGGCTTCCTGCGTTTGTT...............	26	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................CCTC--TCTAATGCCAGTCTCTTTGTCTGT..................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCGAACTCAATCAACGTCGGCT............................	26	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................T--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATA..........................................................	28	1	2.00	2	2	0	0	0	0	0
........TCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-C.........................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTACAGTCGAACTCAATCAACG..................................	26	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................ACCTC--TCTAATGCCAGTCTCTTTGTCTGT..................................................................................................................................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................AACCTC--TCTAATGCCAGTCTCTTTG.......................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAAT..............................................................	27	1	2.00	2	2	0	0	0	0	0
..........C----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CC........................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGTCGAACTCAATCAACGTC................................	26	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................................................................T-CAACCTC--TCTAATGCCAGTCTCTTTGTC.....................................................................................................................................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACGTCGGCTTCCTGCGTT...................	23	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATA..........................................................	25	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................TCTCTTTGTCTGTTCTGTTCTC----TCTCTC...............................................................................................................................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................T--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGC..................................................................	28	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................CT-CCT--T-CAACCTC--TCTAATGCCAGTCTC...........................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
.......CTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACC............................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................TTTGTCTGTTCTGTTCTC----TCTCTCTT--T--........................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................TCTTTGTCTGTTCTGTTCTC----TCTCTC...............................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................TTTGTCTGTTCTGTTCTC----TCTCTCTT--...........................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CAACCTC--TC........................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAATAATATTTTACAGTCGAACT...........................................	27	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................ACCT-CCT--T-CAACCTC--TCTAATGCCAGTC.............................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTTTACAGTCGAACTCAATCAAC...................................	28	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................T--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATAT.........................................................	29	1	2.00	2	2	0	0	0	0	0
....GAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-...............................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTACAGTCGAACTCAATCAACGTCG...............................	29	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................................................TA--C-ACCT-CCT--T-CAACCTC--TCTAATGCCA................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................TTGTCTGTTCTGTTCTC----TCTCTCTT--T--........................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CAACC..............................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
..TCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCG.....................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGTCGAACTCAATCAACGTCGGC.............................	29	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTTTACAGTCGAACTCAATC......................................	25	1	2.00	2	2	0	0	0	0	0
..................................CGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--.....................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACGTCGGCTTCCTGCGTTTGTTT..............	28	1	1.00	1	1	0	0	0	0	0
.....AGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACA............................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................T--T-CAACCTC--TCTAATGCCAGTCTCTTT........................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..TCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--.................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................C-ACCT-CCT--T-CAACCTC--TCTAATGCCAGT..............................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.................................TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CC........................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATATTT.......................................................	28	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCAATCAACGTCGGCTTCCTGCGTG...................	29	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................CTC----TCTCTCTT--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTTCCTGCGTTTGTTTCGTGCA........	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGTCGAACTCAATCAACGTCGGCT............................	28	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................T---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCC.................................................................	25	1	1.00	1	1	0	0	0	0	0
......GCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACC............................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
TATCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGC......................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................GTCTCTTTGTCTGTTCTGTTCTC----TCTC.................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..TCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-...............................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAACGTCGGCTTCCTGCGTTTG.................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGTCGAACTCAATCAACGTCGG..............................	28	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................CTC--TCTAATGCCAGTCTCTTTGTCTG...................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................C-ACCT-CCT--T-CAACCTC--TCTAATGCC.................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................TCTGTTCTGTTCTC----TCTCTCTT--T--TAT---T.................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................TC--TCTAATGCCAGTCTCTTTGTCTGTTC................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCT.......................................................................	18	1	1.00	1	1	0	0	0	0	0
..................................CGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-C..................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................TCTAATGCCAGTCTCTTTGTCTGTTCTG..............................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.ATCGAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCG.....................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAACGTCGGCTTCCTGCGTT...................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................TGTTCTC----TCTCTCTT--T--TAT---TTTT--AC..........................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTACAGTCGAACTCAATCAACGTC................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTCCTGCGTTTGTTTCGTGCAGC......	28	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATTTTACAGTCGAACTCAATCAAC...................................	27	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAA............................................................	27	1	1.00	1	1	0	0	0	0	0
..........C----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-C..................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTTTACAGTCGAACTCAATCAA....................................	27	1	1.00	1	1	0	0	0	0	0
........TCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-..........................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGC..................................................................	27	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................TCTCTTTGTCTGTTCTGTTCTC----TCTCT................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................TA--C-ACCT-CCT--T-CAACCTC--TCTAATGC..................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................TCTGTTCTGTTCTC----TCTCTCTT--T--TA......................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTCGTGCAGCGCGTCT	21	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TCTC----TCTCTCTT--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT.................................................................................	26	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................CAACCTC--TCTAATGCCAGTCTCTTTGTC.....................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................CTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATA..........................................................	26	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAACGTCGGCTTCCTGCGTTTGTT...............	28	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................CCT--T-CAACCTC--TCTAATGCCAGTCTCT..........................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTCCTGCGTTTGTTTCGTGCAGC......	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................AACCTC--TCTAATGCCAGTCTCTTTGT......................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCAATCAACGTCGGCTTCCTGCG.....................	27	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTTTACAGTCGAACTCAAT.......................................	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCAACGTCGGCTTCCTGCGTTTGTT...............	29	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................G----------------------ACGCGTA--C-ACCT-CCT--T-CAACCTC--T.........................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.................................TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CA.................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAATCAACGTCGGCTTCCTGCGTTTG.................	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAA............................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAA...............................................................	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACTCAATCAACGTCGGCTTCCTGC......................	28	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAATCAACGTCGGCTTCCTGCGTT...................	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................T---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAAT..............................................................	28	1	1.00	1	1	0	0	0	0	0
....GAGCTCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACC............................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................T--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCT.................................................................	29	1	1.00	1	1	0	0	0	0	0
.........CC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CC........................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCTTCCTGCGTTTGTTTCGTG..........	25	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATAT.........................................................	26	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGCGTTTGTTTCGTGCAGCGCGTCT	29	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAATATTTTACAGTCGAACTCAAT.......................................	27	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................AACCTC--TCTAATGCCAGTCTCTTTGTCTG...................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGTCGAACTCAATCAACGTCGGC.............................	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................ACCTC--TCTAATGCCAGTCTCTTTGTC.....................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAA...............................................................	29	1	1.00	1	1	0	0	0	0	0
........TCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--.................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..........C----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-C.........................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................CCT-CCT--T-CAACCTC--TCTAATGCCAGTC.............................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTT--CCTTTGGCCAATAATATTTTACA...................................................	29	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGCGTTTGTTTCGTGCAGCGCG...	25	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTCGGCTTCCTGCGTT...................	20	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTCCTGCGTTTGTTTCGTGCA........	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................TCTAATGCCAGTCTCTTTGTCTGTTCTGT.............................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCAACGTCGGCTTCCTGC......................	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................CTC--TCTAATGCCAGTCTCTTTGTCTGTTC................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................T--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATAA.........................................................	29	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................A------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CAACCTC--..........................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.........CC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACC............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TCTC----TCTCTCTT--T--TAT---TTTT--ACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..................................................................................	25	1	1.00	1	1	0	0	0	0	0
...................................GAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-C..................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................T-CCT--T-CAACCTC--TCTAATGCCAGTCTCTT.........................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................AA------G--CG----------------------ACGCGTA--C-ACCT-CCT--T-CAACC..............................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................T-CAACCTC--TCTAATGCCAGTCTCTTTG.......................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACTCAATCAACGTCGGCTTCC.........................	26	1	1.00	1	1	0	0	0	0	0
........TCC----------------------TCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAA------G--CG----------------------ACGCGTA--C-...............................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0

droBip1

TATCGAGCTCC----------------------TCGAG---------------------------------------------------------------------------------------------------------------------------------------------------------AGA------G--CG----------------------ACGCATA--C-ACCA-CCT--T-CAACCAT--TCTAATTCCAGTCTCTTTATCTGTTCTGTTCTC----TCTCTCTC--T--T------T-------TATTT----------------------TT---ACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTT--CCTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTACGTTTGTTTCGTGCGGCGCGTCT	Size	Hit Count	Total Norm	Total
No Reads

droPer2

TTTCGAGTTCG----------------------AAGAGTTCCCC-----------------------------------------------------------------------------T-CA------------------------AAAAGGGATTCG-----G-----AC-GAA-T--TCACGTTAT--ATTACGAAAA------------------------ACG-GGG-AC-------------AAACCAC--TCTAATACCAATCTCCTTTTCCGTTCTGTTTTC----TCTCT-TC--T--T------T-T-ATTTTGTTT----------------------CT---TCGAATC-----TGCT----------------------------CTTCCAAAAC-------------------------------------------------------AACAACA------------------------------------------------------AAC--CTTTTGGCCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

TGATTAAATTTACTAACT---------------CTAATTCTAAT-----------------------------------------TACTATTCCGAGATCGCACGA--------ATTCAATT-AA--------------------------------ACTG----------TTG-GAA-T--TCGTTAAGC--T--ATCTAAG------------------------ACC-TGG-ACCACTACCAC--T-TAACTAC--TCTAATACAAATCTCTCTCTCC---TTGTTTTC----CGTTTCTC--TC---------------------------TTGTCTCTTCTTGTTTCTATTTTGTTTTTA--------------------------------------TG-AAATTATGATTTCCATT-T---------ATCTTTTCT-------------------------------TCTCCTGCGATTATGGTTTTTCTTTTGGTT-TTTTGGTTTTTG-----GTGTCTT--CCTTTGACCAATAATATTTTACAGTCGAACTCAATCAACGTCGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGTCGAACTCAATCAACGTCGGC.............................	28	1	1.00	1	0	0	1	0	0

droVir3

CCTG-AGATCA----------------TAT---TCGA-----------------------------------------------------------------------------ACTGAGCT-GA---------------AAGGCGTC-------AAT----TTCGAATACATCTGAA-T--TCATT-GGT--A------AAA------------------------ACG-ATA--C-A-----------CCATCAC--TCTAAT-CTACTCTCCTTATT--TTCTGTTTT-----TCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTC--CCTTTGACCAATAATATTTTACAGTCGAACTCAATCAACGTTGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT

Size

Hit Count

Total Norm

Total

M027
Male-body

M028
Head

M047
Female-body

M061
Embryo

SRR060654
Ovary

SRR060655
Testis

SRR060656
Ovary

SRR060657
Testis

SRR060658
Ovary

SRR060659
Testis

SRR060660
Ovary

SRR060661
Embryo

SRR060662
Embryo

SRR060663
Embryo

SRR060664
Male-body

SRR060665
Female-body

SRR060666
Male-body

SRR060667
Female-body

SRR060668
Male-body

SRR060669
Female-body

SRR060670
Testis

SRR060671
Male-body

SRR060672
Female-body

SRR060673
Ovary

SRR060674
Ovary

SRR060675
Ovary

SRR060676
Ovary

SRR060677
Ovary

SRR060678
Testis

SRR060679
Testis

SRR060680
Testis

SRR060681
Testis

SRR060682
Embryo

SRR060683
Testis

SRR060684
Embryo

SRR060685
Embryo

SRR060686
Embryo

SRR060687
Embryo

SRR060688
Ovary

SRR060689
Testis

SRR1106712
embryo_0-2h

SRR1106713
embryo_0-2h

SRR1106714
embryo_2-4h

SRR1106715
embryo_4-6h

SRR1106716
embryo_4-6h

SRR1106717
embryo_6-8h

SRR1106718
embryo_6-8h

SRR1106719
embryo_8-10h

SRR1106720
embryo_8-10h

SRR1106721
embryo_10-12h

SRR1106722
embryo_10-12h

SRR1106723
embryo_12-14h

SRR1106724
embryo_12-14h

SRR1106725
embryo_14-16h

SRR1106726
embryo_14-16h

SRR1106727
larvae

SRR1106728
larvae

SRR1106729
mixed whole adult body

SRR1106730
embryo_16-30h

V047
Embryo

V053
Head

V116
Male-body

GSM1528803
follicle cells

No Reads

droMoj3

CTAA-----AC-------CTGAGACTATATTCGAAGGGTTCCCC------------------------------------------------------------------------------------------------TAGGC----------AACTCGCCTCGAATATATCTGAA-C--TCATC-GGTTTC------A--CA----------------------ACG-ATA--C-A-----------CCATCTC--TCTAA--------------TCTGCTCTCCTTATTTTCTGTTTTTC-TTCGTTT---TT-T--TTCTCTCTC------------TCTTTCTCTCT---CTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCGC--CCTTTGACCAATAATATTTTACAGTCGAACTCAATCAACGTTGGCTTCCTGCGTTTGTTTCGTGCGGCGCGTCT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

ATATTCGA----------------------------------------------------------------------------------------------------------ACTGAGCT-GA---------------AAAGCATC-------AAT----TTTGAATACATCTGAA-T--TGGT-CTGT--A------AGGAAC---------------------ACG-GGA--C-A-----------ACATCAC--TCTAATACTATTT-C-----------TCCTTATTTCCTGTTTCTC--G--TTT--------------------------------------------CTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTCT--CCTTTGACCAATAATATTTTACAGTCGAACTCAATC-ACGTCGGCTTCTTGCGTT-G-TTCGTGCGGCCCGTCT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_27344

x:11224076-11224225 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-16.3	-16.1	-15.9