ID:

dsi_27260

 Coordinate:

3l:19132143-19132292 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4 -18.1 -17.8 -17.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
PROTOP_ADNAP-
mature
  1. 2l:20640744-20640762 -
  2. 2l:21529017-21529035 -
  3. 2l:21681887-21681905 -
  4. 2l:21699685-21699703 -
  5. 2l:22854253-22854271 -
  6. 2l:23545973-23545991 -
  7. 2r:106363-106381 -
  8. 2r:794538-794556 -
  9. 2r:1349619-1349637 -
  10. 2r:2088679-2088697 -
  11. 2r:2129886-2129904 -
  12. 2r:3169386-3169404 -
  13. 3l:24169475-24169493 -
  14. x:926111-926129 -
  15. node_55466:1947-1965 -
  16. node_105875:8420-8438 -
  17. node_4916:2240-2258 -
  18. node_57144:270-288 -
  19. node_50677:6896-6914 -
  20. node_4957:198-216 -
  21. 2l:11192763-11192781 +
  22. 2l:21657488-21657506 +
  23. 2l:22860630-22860648 +
  24. 2r:324645-324663 +
  25. 2r:538011-538029 +
  26. 2r:800223-800241 +
  27. 2r:1031316-1031334 +
  28. 2r:2088104-2088122 +
  29. 3l:23430820-23430838 +
  30. 3l:23813718-23813736 +
  31. 3l:23900064-23900082 +
  32. 3l:23966795-23966813 +
  33. x:20331933-20331951 +
  34. node_77409:2681-2699 +
  35. node_96912:136-154 +
  36. node_59901:7675-7693 +
  37. node_99549:22-40 +
  38. node_57071:1754-1772 +
  39. node_43743:1807-1825 +
  40. node_104224:6498-6516 +
  41. 3l:23617647-23617665 -
  42. 2l:22892846-22892864 -
  43. 2r:308882-308900 -
  44. dsi_27260  3l:19132179-19132197 -
  45. 3l:23832690-23832708 -
  46. 3l:24151984-24152002 -
  47. 3r:6577004-6577022 -
  48. dsi_31074  3r:6866602-6866620 -
  49. dsi_8931  4:174933-174951 -
  50. 4:356044-356062 -
  51. 4:494731-494749 -
  52. x:20273195-20273213 -
  53. x:20313301-20313319 -
  54. node_92658:46-64 -
  55. node_1575:7-25 -
  56. node_15163:1180-1198 -
  57. node_16781:215-233 -
  58. node_58476:536-554 -
  59. node_35725:29-47 -
  60. node_39540:1280-1298 -
  61. node_79270:62-80 -
  62. 2l:20858050-20858068 -
  63. 2l:22016473-22016491 -
  64. 2l:22305741-22305759 -
  65. 2r:1265797-1265815 -
  66. 2r:1455194-1455212 -
  67. 3l:23607457-23607475 -
  68. 3l:23658060-23658078 -
  69. 3l:23938925-23938943 -
  70. 3l:24069728-24069746 -
  71. 3l:24231714-24231732 -
  72. 3r:2248255-2248273 -
  73. x:9549-9567 -
  74. x:868395-868413 -
  75. x:14446183-14446201 -
  76. node_9846:64-82 -
  77. node_1687:1634-1652 -
  78. 2l:20872153-20872171 +
  79. 2r:1186357-1186375 +
  80. 2r:1279900-1279918 +
  81. 2r:1774272-1774290 +
  82. 2r:2621770-2621788 +
  83. 3l:12710728-12710746 +
  84. 3l:22958640-22958658 +
  85. 3l:23654911-23654929 +
  86. 3r:2136060-2136078 +
  87. x:6395985-6396003 +
  88. x:19555395-19555413 +
  89. x:20196680-20196698 +
  90. x:20534653-20534671 +
  91. node_32604:264-282 +
  92. node_51319:1102-1120 +
  93. node_54872:9382-9400 +
  94. node_9846:991-1009 +
star
  1. 2l:20561275-20561299 +
  2. 2l:21860233-21860257 +
  3. 2l:23452451-23452475 +
  4. 2r:881029-881053 +
  5. 2r:1149133-1149157 +
  6. 2r:1186316-1186340 +
  7. 2r:1856191-1856215 +
  8. 2r:2151293-2151317 -
  9. 2r:2401509-2401533 +
  10. 3l:23037468-23037492 +
  11. 3l:23173840-23173864 +
  12. 3l:23813662-23813686 +
  13. 3l:23966740-23966764 +
  14. 4:112819-112843 +
  15. x:20309509-20309533 +
  16. x:20534597-20534621 +
  17. node_42303:7782-7806 +
  18. node_54872:9326-9350 +
  19. node_59659:238-262 +
  20. node_19457:4296-4320 +
  21. 2r:1077759-1077783 -
  22. dsi_19179  2l:21028287-21028311 -
  23. 2l:21485265-21485289 -
  24. 2l:22305776-22305800 -
  25. 2r:1143925-1143949 -
  26. 2r:2110086-2110110 -
  27. 3l:22787108-22787132 -
  28. 3l:22852358-22852382 -
  29. 3l:23710042-23710066 -
  30. 3l:23832740-23832764 -
  31. node_3296:207-231 -
  32. node_92658:96-120 -
  33. node_58476:586-610 -
  34. node_59659:19363-19387 -
  35. node_57944:20438-20462 -
  36. node_50677:6946-6970 -
  37. node_50677:14942-14966 -
  38. node_31339:598-622 -
  39. node_4957:233-257 -
  40. 2l:22026712-22026736 -
  41. 2r:153901-153925 -
  42. dsi_27260  3l:19132229-19132253 -
  43. 3l:23617696-23617720 -
  44. 3l:24079967-24079991 -
  45. 4:494781-494805 -
  46. x:20313351-20313375 -
  47. node_36225:3656-3680 -
  48. node_15163:1230-1254 -
  49. node_39540:1330-1354 -
  50. node_79270:112-136 -

Sense Strand Reads

CTACTGGTGGCGGTCTCAGCGCAGGCGACTGGGGGTCCTTTCTAAAAAACGTACGTATTTGAACATGGTGAAATCAAAGACACTAGAATAACAAGATGCGTAACGCCATACGATGTTTTGGCACACGATTTTTTCGGCGTGGCTCTAGAGGTGGCTCCAGGCTCTCTCGAGTTTTTGTTCAAGAGCGAGAGAGCGGAGAGCTCTACAGCAATTGACAGCAGACAACTCTATGCGTGCACACGTGTACTCA
*****************************************************************************************.....((.((......((((......((..(((.((((..........)))))))..))..))))......))))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 O002
Head
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 M024
male body		 GSM343915
embryo
 M023
head
.................................................................................................................................................TAGAGGTGGCTCCAGGCTC...................................................................................... 19 0 20 70.50 1410 0 1410 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCATACGAT........................................................................................................................................ 25 0 20 57.40 1148 1148 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCC............................................................................................................................................... 19 0 20 35.35 707 0 0 707 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCATACGATGT...................................................................................................................................... 27 0 3 30.33 91 86 5 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCATACGATG....................................................................................................................................... 26 0 3 20.00 60 53 5 0 0 0 0 0 0 0 0 1 0 1 0
.....................................................................................GAATAACAAGATGCGTAACGCCAT............................................................................................................................................. 24 0 20 17.55 351 339 0 0 0 0 0 0 0 0 0 12 0 0 0
...........................................................................................................................................................................................................TACAGCAATTGACAGCAGACAACTCTA.................... 27 0 2 10.00 20 0 0 0 12 0 0 8 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGA..................................................... 23 0 10 9.30 93 8 10 0 10 19 15 0 23 7 0 1 0 0 0
...........................................................................................................................................................................................................TACAGAAATTGACAGCAGACAACTCTA.................... 27 1 2 8.50 17 0 0 0 10 0 0 7 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCATACGATGTT..................................................................................................................................... 28 0 3 7.33 22 22 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAATAACAAGATGCGTAACGCCATACG.......................................................................................................................................... 27 0 20 4.80 96 0 0 96 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCATACGAT........................................................................................................................................ 26 0 20 4.40 88 0 88 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CCAGGCTCTCTCGAGTTT............................................................................ 18 0 20 3.95 79 1 78 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAG.................................................... 24 0 10 3.00 30 5 0 0 4 10 3 0 2 3 0 2 0 1 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGG...................................................... 22 0 12 2.58 31 5 0 0 9 1 0 11 2 2 0 1 0 0 0
.........................................................................................................................................................................................................TCTACAGCAATTGACAGCAGACAACTCTA.................... 29 0 2 2.50 5 0 0 0 1 0 0 3 1 0 0 0 0 0 0
...........................................................................................................................................................................................................TACAGCAATTGACAGCAGACAACTCTAT................... 28 0 2 2.50 5 0 0 0 3 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TACAGCAATTGACAGCAGACAACTCT..................... 26 0 2 2.50 5 0 0 0 2 0 0 3 0 0 0 0 0 0 0
.................................................................................................................TGTTTTGGCACACGATTTTTTCGGC................................................................................................................ 25 0 2 2.50 5 0 0 0 0 0 3 0 0 2 0 0 0 0 0
....................................................................................................................................................................................................................TGACAGCAGACAACTCTATGCGTGC............. 25 0 2 2.50 5 0 0 0 0 2 1 0 2 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAGA................................................... 25 0 10 2.40 24 2 0 0 0 6 4 0 6 5 0 1 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCTC............................................................................................. 25 0 15 2.27 34 4 0 0 25 2 0 1 0 1 0 1 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGTGGC............................................................................................... 27 0 16 2.25 36 3 0 0 4 1 11 0 15 2 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGGTGGC............................................................................................... 25 0 16 2.00 32 3 0 0 5 1 13 3 3 0 3 0 1 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGAGCGGA..................................................... 24 0 10 2.00 20 0 0 0 0 5 3 0 6 6 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGG................................................................................................... 23 0 19 1.89 36 2 0 0 0 12 4 0 4 4 10 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGTG................................................................................................. 25 0 19 1.68 32 0 0 0 6 6 8 0 5 6 1 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGAGCGGAG.................................................... 25 0 10 1.60 16 3 0 0 1 2 4 0 1 5 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAGAGC................................................. 27 0 8 1.38 11 2 0 0 0 3 1 0 3 0 0 1 1 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGAGAGCGGA..................................................... 25 0 10 1.30 13 0 0 0 0 7 1 0 2 3 0 0 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAGAGCTC............................................... 26 0 10 1.20 12 3 0 0 0 3 1 0 3 1 0 1 0 0 0
...........................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGAGCGGA..................................................... 26 0 10 1.20 12 0 0 0 0 5 2 0 5 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCTCCA........................................................................................... 27 0 14 1.14 16 1 0 0 2 7 2 0 0 4 0 0 0 0 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGGTGGC............................................................................................... 26 0 16 1.13 18 3 0 0 4 1 6 0 2 1 1 0 0 0 0
...................................................................................................................TTTTGGCACACGATTTTTTCGGCG............................................................................................................... 24 0 15 1.07 16 2 0 0 1 3 3 0 0 6 0 0 0 1 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGGTG................................................................................................. 24 0 20 1.05 21 2 0 0 0 8 5 0 2 2 2 0 0 0 0
....................................................................................................................................................................................................................TGACAGCAGACAACTCTATGCGTGCA............ 26 0 2 1.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................TACAGAAATTGACAGCAGACAACTCT..................... 26 1 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGACAGCAGACAACTCTATGCG................ 22 0 2 1.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAGAG.................................................. 26 0 8 1.00 8 2 0 0 0 1 0 0 1 4 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGAAATTGACAGCAGACAACTC...................... 27 1 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TACAGCGAATGACAGCAGACAACTCTA.................... 27 2 2 1.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GGCGTGGCTCTAGAGGTGGC............................................................................................... 20 0 20 0.95 19 0 19 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCT.............................................................................................. 24 0 18 0.94 17 0 0 0 6 3 2 3 2 1 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGGTG................................................................................................. 23 0 20 0.90 18 1 0 0 1 5 6 0 1 3 1 0 0 0 0
.....................................................................................GAATAACAAGATGCGT..................................................................................................................................................... 16 0 20 0.90 18 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGTTCAAGAGCGAGAGAGCGGAGAGC................................................. 26 0 8 0.88 7 1 0 0 0 1 1 0 0 4 0 0 0 0 0
...........................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGAGCGGAG.................................................... 27 0 10 0.70 7 0 0 0 0 1 2 0 3 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCG....................................................... 21 0 13 0.69 9 4 0 0 0 4 0 0 1 0 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGGTGG................................................................................................ 24 0 19 0.68 13 2 0 0 5 3 2 0 0 1 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGT.................................................................................................. 24 0 19 0.68 13 0 0 0 0 3 1 0 1 0 8 0 0 0 0
..............CTCAGCGCAGGCGACTGGGGGTC..................................................................................................................................................................................................................... 23 0 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
............................................................................................AAGATGCGTAACGCCATACGATGT...................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AGCAAGATGCGTAACGCCATACGATGT...................................................................................................................................... 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAGATGCGTAACGCCATACGATGTT..................................................................................................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TCAGCGCAGGCGACTGGGGGTCCTTTC................................................................................................................................................................................................................ 27 0 3 0.67 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCATACGATGT...................................................................................................................................... 28 0 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGGTGG................................................................................................ 25 0 19 0.63 12 5 0 0 1 0 3 0 2 1 0 0 0 0 0
.............................................AAAACGTTCGTATTTGA............................................................................................................................................................................................ 17 1 8 0.63 5 0 0 0 0 0 5 0 0 0 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGTGG................................................................................................ 26 0 18 0.61 11 0 0 0 1 2 3 0 2 3 0 0 0 0 0
...........................................................................................TAAGATGAGTAACGCCATACG.......................................................................................................................................... 21 2 20 0.60 12 0 12 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAATAACAAGATGCGTAACGCCATA............................................................................................................................................ 25 0 20 0.60 12 0 0 0 0 12 0 0 0 0 0 0 0 0 0
...................................................................................................................TTTTGGCACACGATTTTTTCGGC................................................................................................................ 23 0 15 0.60 9 0 0 0 0 1 3 0 4 1 0 0 0 0 0
.................................................................................................................................................TAGAGGTGGCTCCAGGCTCTCTCG................................................................................. 24 0 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCTCC............................................................................................ 26 0 14 0.57 8 0 0 0 0 2 1 0 1 1 2 1 0 0 0
.........................................................................................AACAAGATGCGTAACGC................................................................................................................................................ 17 0 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGGTGGCTC............................................................................................. 27 0 15 0.53 8 2 0 0 6 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TACAGCAATTGACAGCAGACAACTCTT.................... 27 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TACAGCAATTGACAGCAGACAACTCTATG.................. 29 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGACAACTCTATGCG................ 17 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGCAATTGACAGCAGACAACTCT..................... 28 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TACAGAAATTGACAGCAGACAACTCTAT................... 28 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGCGAATGACAGCAGACAACTCTA.................... 29 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................TGTTTTGGCACACGATTTTTTCGGCGT.............................................................................................................. 27 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGCAATTGACAGCAGACAACTCTA.................... 24 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGAAATTGACAGCAGACAACTCA..................... 28 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AATTGACAGCAGACAACTCTATGCG................ 25 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CAGAAATTGACAGCAGACAACTCTATG.................. 27 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTCC............................................................................................ 25 0 14 0.50 7 1 0 0 1 3 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................TTGACAGCAGACAACTCTATGCGTGCA............ 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGCGAATGACAGCAGACAACTC...................... 27 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................TCTACAGCGAATGACAGCAGACAACT....................... 26 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGAGAGCGGAG.................................................... 26 0 10 0.50 5 0 0 0 1 0 1 0 3 0 0 0 0 0 0
..........................................................................................................................................................................................................................CAGACAACTCTATGCGTGCACACGTG...... 26 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................TGTTTTGGCACACGATTTTTTCGGCG............................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGCGAATGACAGCAGACAACTCTATG.................. 26 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGAAATTGACAGCAGACAACTCTA.................... 29 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................TGTTTTGGCACACGATTTGTTCGGCGTGGCTC......................................................................................................... 32 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCTACAGCGAATGACAGCAGACAAC........................ 25 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAATAACAAGATGCGTAACGCCATACGA......................................................................................................................................... 28 0 20 0.50 10 1 0 0 0 5 4 0 0 0 0 0 0 0 0
.....................................................................................................................TTGGCACACGATTTTTTCGGCGTGGC........................................................................................................... 26 0 17 0.47 8 4 0 0 0 0 0 0 0 0 0 3 0 1 0
...................................................................................................................TTTTGGCACACGATTTTTTCGGCGT.............................................................................................................. 25 0 15 0.47 7 0 0 0 0 1 0 0 1 3 0 2 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAGAGC................................................. 24 0 13 0.46 6 1 0 0 0 1 0 0 1 1 1 1 0 0 0
.........................................................................................AACAAGATGCGTAACGCCATACGA......................................................................................................................................... 24 0 20 0.45 9 0 0 0 0 0 0 0 0 0 0 8 0 1 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGC............................................................................................... 23 0 18 0.44 8 1 0 0 2 2 1 0 1 0 0 1 0 0 0
...................................................................................................................................TTTCGGCGTGGCTCTAGAGGTGGC............................................................................................... 24 0 16 0.44 7 2 0 0 0 0 2 1 2 0 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTCCA........................................................................................... 26 0 14 0.43 6 1 0 0 1 1 1 0 1 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGT..................................................... 23 1 12 0.42 5 1 0 0 2 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGGAGA................................................... 25 1 10 0.40 4 0 0 0 0 0 0 0 3 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGGA..................................................... 23 1 10 0.40 4 0 0 0 1 0 0 0 3 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCAT............................................................................................................................................. 21 0 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTGGCACACGATTTTTTCGGCGTGGCTC......................................................................................................... 28 0 15 0.40 6 3 0 0 0 2 0 0 0 0 0 1 0 0 0
..............................................................................................................................GATTTTTTCGGCGTGGCTCTAGAGG................................................................................................... 25 0 16 0.38 6 0 0 0 0 4 0 0 1 1 0 0 0 0 0
.....................................................................................................................TTGGCACACGATTTTTTCGGCGTGGCT.......................................................................................................... 27 0 16 0.38 6 2 0 0 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAT.................................................... 24 1 11 0.36 4 0 0 0 0 0 0 3 0 1 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGAGCGGAGAGCTCT.............................................. 26 0 11 0.36 4 3 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................ACAAGATGCGTAACGCCAT............................................................................................................................................. 19 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGGT.................................................................................................. 23 0 20 0.35 7 0 0 0 0 5 0 0 0 0 2 0 0 0 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGGTGGCTC............................................................................................. 28 0 15 0.33 5 0 0 0 5 0 0 0 0 0 0 0 0 0 0
.......TGGCGGTCTCAGCGCAGGCGAC............................................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TCAGCGCAGGAGACTGGGGGTCCTTT................................................................................................................................................................................................................. 26 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTGACAGCAGACAACTCTATGCGTGCC............ 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AACGCCATACGATGT...................................................................................................................................... 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGAGCGG...................................................... 23 0 12 0.33 4 0 0 0 0 1 0 0 0 3 0 0 0 0 0
.........................................................................................AACAAGATGCATAACGCCATACGATG....................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TCAGCGCAGGCGACTGGGGGTCCTTTA................................................................................................................................................................................................................ 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCGTACGATGT...................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGTTCAAGAGCGAGAGAGCGGAGAGCT................................................ 27 0 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCATACGATG....................................................................................................................................... 27 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.TACTGGTGGCGGTCTCAGCGCAGGCG............................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGTAACGCCATACGATGT...................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGATGCGTAACGCCATACGATGT...................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATACGTAACGCCATACGATGGT..................................................................................................................................... 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AGCGCAGGCGACTGGGGTTT..................................................................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....TGGTGGCGGTCTCAGCGCAGGCGA.............................................................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ATGCGTAACGCCATACGATGT...................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTTCGGCGTGGCTCTAGAGGTGG................................................................................................ 23 0 19 0.32 6 1 0 0 3 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGG................................................................................................... 22 0 20 0.30 6 0 0 0 0 1 1 0 1 1 2 0 0 0 0
.........................................................................................AACAAGATGCGTTACGCCATACGA......................................................................................................................................... 24 1 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AAACGTTCGTATTTGA............................................................................................................................................................................................ 16 1 10 0.30 3 0 0 0 0 0 2 0 0 1 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGG................................................................................................... 21 0 20 0.30 6 0 0 0 0 1 0 0 0 2 0 0 2 0 1
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAG.................................................................................................... 21 0 20 0.30 6 0 0 0 0 0 2 0 0 2 1 0 0 0 1
.....................................................................................................................TTGGCACACGATTTTTTCGGCGTGG............................................................................................................ 25 0 17 0.29 5 2 0 0 0 1 0 0 0 1 0 1 0 0 0
.............................................................................................................................CGATTTTTTCGGCGTGGCTCTAGAGG................................................................................................... 26 0 14 0.29 4 0 0 0 0 0 3 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGC........................................................ 20 0 14 0.29 4 1 0 0 0 0 0 0 2 0 1 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTCCAGGC........................................................................................ 29 0 11 0.27 3 0 0 0 0 0 1 0 2 0 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGAGCGGAGAGCTC............................................... 25 0 11 0.27 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGT...................................................... 22 1 15 0.27 4 1 0 0 0 0 0 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GAGCTCTACAGCAATTGACAGCAGA............................ 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGAGAGAAAGCGG...................................................... 22 2 20 0.25 5 0 1 0 0 1 0 3 0 0 0 0 0 0 0
...........................................................................................................................................................TCCAGGCTCTCTCGAGTTTTTGTTCAA.................................................................... 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GCGGAGAGCTCTACAGAAATTGACAGC............................... 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCACACGATGT...................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAACGCCATACGATGGTA.................................................................................................................................... 29 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GCGGAGAGCTCTACAGCAATTGACAGC............................... 27 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................AGCTCTACAGAAATTGACAGCAGA............................ 24 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGCTCTCTCGAGTTTTTGTTCAAGATCG............................................................... 28 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGCTCTACAGCAATTGACAGCAGA............................ 24 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGCTCTACAGCGAATGACAGCAGA............................ 24 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAA.................................................... 24 1 12 0.25 3 1 0 0 0 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................TGGCTCTAGAGGTGGCTCCAG.......................................................................................... 21 0 20 0.25 5 4 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GCGGAGAGCTCTACAGAAATTGACA................................. 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GAGCTCTACAGCGAATGACAGCAGA............................ 25 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TGGCTCTAGAGGTGGCTCCAGGC........................................................................................ 23 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCT.............................................................................................. 23 0 18 0.22 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGAGAGAGAGCGGAGA................................................... 25 1 14 0.21 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGAGAGAGAGCGGA..................................................... 23 1 14 0.21 3 0 0 0 0 1 1 0 0 1 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGG................................................................................................ 22 0 20 0.20 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GATTTGGCACACGATTTTTTCGGC................................................................................................................ 24 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................TTTCGGCGTGGCTCTAGAGGT.................................................................................................. 21 0 20 0.20 4 0 0 0 0 0 0 0 0 1 2 0 1 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGAGCGGAGA................................................... 26 0 10 0.20 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TCGAGTTTTTGTTCAAGAGCGAGA............................................................ 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTTCGGCGTGGCTCTAGAGGTG................................................................................................. 22 0 20 0.20 4 1 0 0 0 1 1 0 1 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTG................................................................................................. 21 0 20 0.20 4 2 0 0 0 1 0 0 0 1 0 0 0 0 0
........................................TCTTAAAAACGTTCGTAGTTG............................................................................................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................ACAAGATGCGTAACGCCATA............................................................................................................................................ 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGAGTGCGGA..................................................... 25 1 10 0.20 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0
....................................................................................................................TTTGGCACACGATTTTTTCGGCGTGGC........................................................................................................... 27 0 15 0.20 3 0 0 0 0 1 0 0 0 0 0 2 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAC.................................................... 24 1 10 0.20 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGAA.............................................................................................. 24 2 20 0.20 4 0 0 0 3 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................TTTCGGCGTGGCTCTAGAGGTGGCT.............................................................................................. 25 0 16 0.19 3 0 0 0 2 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TTTGGCACACGATTTTTTCGGCGT.............................................................................................................. 24 0 16 0.19 3 0 0 0 0 2 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGAGCGGAGAGCT................................................ 24 0 11 0.18 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCTCCAGGC........................................................................................ 30 0 11 0.18 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGAGCGGAGA................................................... 21 0 17 0.18 3 0 0 0 0 1 0 0 0 2 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGAGAGCGG...................................................... 24 0 12 0.17 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................TCTCTCGAGTTTTTGTTCAAGATCGA.............................................................. 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGG...................................................... 22 1 12 0.17 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................TCTCGAGTTTTTGTTCAAGATCGAGAGA.......................................................... 28 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGCTGTAGAGCAATTGAC.................................. 18 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGAGCGGAA.................................................... 25 1 12 0.17 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGTT.................................................... 24 2 13 0.15 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGAGCG....................................................... 24 0 13 0.15 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................ACGATTTTTTCGGCGTGGCTCTAGAGG................................................................................................... 27 0 13 0.15 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................CGTGGCTCTAGAGGTGGCTCCAGGCTC...................................................................................... 27 0 20 0.15 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACG................................................................................................................................................. 17 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.........................................................................................ACCAAGATGCGTAACGCCATACGAT........................................................................................................................................ 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTGGCTCTAGAGGTGGCTCCAGGCTCT..................................................................................... 27 0 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGGCTCCAGGCTCTCT................................................................................... 16 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAATAACAAGATGCGTAACG................................................................................................................................................. 20 0 20 0.15 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0
...........................................................................................................................................................................................AGAGAGCGGAGAGCTCTACAGC......................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACACGATTTTTTCGGCG............................................................................................................... 17 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGGCGTGGCTCTAGAGGTG................................................................................................. 19 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGAGCGGAGAGC................................................. 23 0 14 0.14 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................TTTTGGCACACGATTTTTTCGGCGTGG............................................................................................................ 27 0 14 0.14 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0
........GGCGACCTCAGCTCAGGCGA.............................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TTTGGCACACGATTTTTTCGGCGTGG............................................................................................................ 26 0 15 0.13 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAG.................................................... 21 0 15 0.13 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGGAGAG.................................................. 26 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................TGGTAAAATCAAAGGCATTAGAATAACA............................................................................................................................................................. 28 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................AACGTTCGTATTTGA............................................................................................................................................................................................ 15 1 16 0.13 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.........................................................................................AACAAGATGCGTAGCGCCATACGATGT...................................................................................................................................... 27 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGGCACACGATTTTTTCGGCGTGGCT.......................................................................................................... 26 0 16 0.13 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGA.......................................................... 18 0 16 0.13 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGGGCGGAGAGC................................................. 28 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................TTCGGCATGGCTCTAGAGGTGGCTCCA........................................................................................... 27 1 17 0.12 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................TTGGCACACGATTTTTTCGGCGTGGG........................................................................................................... 26 1 17 0.12 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
......................................................................................................................TGGCACACGATTTTTTCGGCGTGG............................................................................................................ 24 0 17 0.12 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGAGCGGA..................................................... 19 0 17 0.12 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGTTT................................................... 25 3 17 0.12 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TTTGGCACACGATTTTTTCGGC................................................................................................................ 22 0 18 0.11 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAGAGCTCTA............................................. 28 0 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAGATTT................................................ 28 2 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................CACGATTTTTTTGGCGTGGCTCTAGA..................................................................................................... 26 1 18 0.11 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGC.................................................................................................. 24 1 19 0.11 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
............................................................................................................................ACTATTTTTTCGGCGTGGCTCTAGA..................................................................................................... 25 1 19 0.11 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
...........................................................................................................................................................................TTTTTGTTCAAGAGCGAGA............................................................ 19 0 19 0.11 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGA............................................................ 16 0 19 0.11 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGTT................................................................................................. 25 1 19 0.11 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCC.............................................................................................................................................. 20 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAG.................................................................................................... 20 0 20 0.10 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................GTGGCTCTAGAGGTGGCTCCAGGC........................................................................................ 24 0 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACGATTTTTTCGGCGTGGCTC......................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGG................................................................................................... 19 0 20 0.10 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
........TGCGATCTCAGCTCAGGCGA.............................................................................................................................................................................................................................. 20 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTC......................................................................................................... 17 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGAGCTC...................................................... 25 2 20 0.10 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
........................................................................................CAACAAGATGCGTAACGCCATACGAT........................................................................................................................................ 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTGGCTCTAGAGGTGGCTCCA........................................................................................... 22 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTGGCACACGATTTTTTCGGC................................................................................................................ 21 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
...................................................................................................................TTTTGGCACACGATTTTTTCGACGT.............................................................................................................. 25 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGTTCAAGAGCGAGAGAGCGGAGA................................................... 24 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................AGGATGCGTAACGCCATACGAT........................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TAGAGGTGGCTCCAGGCTCT..................................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
.................................................................................................................................TTTTTCGGCGTGGCTCTAGAGGTA................................................................................................. 24 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTTTGTTCAAGAGCGAGAGAGCGGAG.................................................... 26 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TGGTAAAATCAAAGGCATTAGAATAA............................................................................................................................................................... 26 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGATGCGTAACGCCAT............................................................................................................................................. 16 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CAAGAGCGAGAGAGCGGAGAGCTCTA............................................. 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACGATTTTTTCGGCGTGGC........................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCATACGATC....................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGGAG.................................................... 24 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................TAATAAGATGCGTAACGCCATACGAT........................................................................................................................................ 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACAAGTTGCGTAACGCCATACGAT........................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTTTTGGTCAAGAGCGAGAGAGCGGA..................................................... 26 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGTAGA................................................... 25 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGATAGCGGAG.................................................... 26 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAGATA................................................. 27 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................CACGATTTTTTCGGCGTGGCTCTAGAGG................................................................................................... 28 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGATAGCGGA..................................................... 23 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGGCGTGGCTCTAGAGGTGGCTCCAGGC........................................................................................ 28 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGAGAT.................................................. 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGGAT.................................................... 24 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTCCAGG......................................................................................... 28 0 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CACGATTTTTTCGGCGTGGCTCTAGA..................................................................................................... 26 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCGGT..................................................... 23 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................CGGCGTGGCTCTAGAGGTGGCTCCAGG......................................................................................... 27 0 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTAGTTCAAGAGCGAGAGAGCGGA..................................................... 24 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCTGA..................................................... 23 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGAGCGG...................................................... 25 0 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGTGCGG...................................................... 23 1 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGAGAGCGGT..................................................... 25 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................CACACGATTTTTTCGGCGTGGCTCTAGA..................................................................................................... 28 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGAGAGAGCG....................................................... 23 0 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGCGTGAGAGTGG...................................................... 24 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACGATTTTTTCGGCGTGGCTCTAGAGGT.................................................................................................. 28 0 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGTGCG....................................................... 21 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAGATCT................................................ 25 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GGTTTGTTCAAGAGCGAGAGAGC........................................................ 23 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTCCAG.......................................................................................... 27 0 14 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................TTTTGGCACACGATTTTTTCGGCGTGGC........................................................................................................... 28 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................TGTTCAAGAGCGAGAGAGC........................................................ 19 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTTTGTTCAAGAGAGAGAGAGCGGAG.................................................... 26 1 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGGCGTGGCTCTAGAGGTGGCTCCA........................................................................................... 25 0 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................TAACAAGATGCGTAACGCCATACAATGA...................................................................................................................................... 28 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGAGC........................................................ 21 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGGCGTGGCTCTAGAGGTGGCTCCAG.......................................................................................... 26 0 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGGTGGCTCC............................................................................................ 28 0 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................CACGATTTTTTCGGCGTGGCTCTAGAA.................................................................................................... 27 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCTCCAG.......................................................................................... 28 0 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................TCCGGCGTGGCTCTAGAGGTGGCTCC............................................................................................ 26 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGGCGTGGCTCTAGAGGTGGCTCCAA.......................................................................................... 28 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAGCGGATTT.................................................. 26 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTCCAA.......................................................................................... 27 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCAAGAGCGAGAGACCGGAGAGCTTT.............................................. 26 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACGATTTTTTCGGCGTGGCTCTAG...................................................................................................... 24 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAGA................................................... 22 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGTTCAAGAGAGAGAGAGCGGAGA................................................... 24 1 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................TCGGCGTGGCTCTAGAGGTGGCTC............................................................................................. 24 0 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAAAGAGCGGA..................................................... 23 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTCTAGAGGTGGCTC............................................................................................. 29 0 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAGAG......................................................... 19 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGGCACACGATTTTTTCGGCGTGGCTC......................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTCAAGAGCGAGAGAGCGGAGATCTA............................................... 26 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTGTTCAAGAGCGAGAGA.......................................................... 19 0 16 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTCAAGAGCGTGAGAGTGGAG.................................................... 21 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGTTCAAGAGCGAGAG........................................................... 17 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGCGAGAGAGCGGAGAGCTCTACAGC......................................... 26 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TTCTTTCGGCGTGGCTCTAGAGGTGGC............................................................................................... 27 1 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................TTTTCGGCGTGGCTCTAGAGGTGGCC.............................................................................................. 26 1 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................TTTTTTCGGCGTGGCTTTAGAGGTGGC............................................................................................... 27 1 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GATGACCACCGCCAGAGTCGCGTCCGCTGACCCCCAGGAAAGATTTTTTGCATGCATAAACTTGTACCACTTTAGTTTCTGTGATCTTATTGTTCTACGCATTGCGGTATGCTACAAAACCGTGTGCTAAAAAAGCCGCACCGAGATCTCCACCGAGGTCCGAGAGAGCTCAAAAACAAGTTCTCGCTCTCTCGCCTCTCGAGATGTCGTTAACTGTCGTCTGTTGAGATACGCACGTGTGCACATGAGT
**************************************************************************************.....((.((......((((......((..(((.((((..........)))))))..))..))))......))))***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR902008
ovaries
 O002
Head
 M025
embryo
 M024
male body		 SRR902009
testis
 M023
head
...........................................................................TTTCTGTGATCTTATTGTTCTACG....................................................................................................................................................... 24 0 20 116.55 2331 2331 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TCTTATTGTTCTACGCATTG.................................................................................................................................................. 20 0 20 29.50 590 590 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 24 0 8 6.63 53 0 19 11 4 13 5 1 0 0 0 0 0 0
.............................................................................................TCTACGCATTGCGGTATGCTA........................................................................................................................................ 21 0 20 5.30 106 106 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CTGTTGAGATACGCACGTGTGCAC...... 24 0 2 4.00 8 6 0 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGCACCGAGATCTCCACCGAGGT........................................................................................... 26 0 14 2.43 34 0 8 10 0 13 2 0 1 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTATTGTTCTAC........................................................................................................................................................ 27 0 8 2.13 17 0 2 9 0 3 3 0 0 0 0 0 0 0
.....................................................................CTTTAGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 26 0 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0 0 0
........................................AGATTTTTGGCATGCATAAACTTGT......................................................................................................................................................................................... 25 1 3 1.33 4 0 1 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAAAAGCCGCACCGAGAT....................................................................................................... 18 0 20 1.30 26 26 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GTCTGTTGAGATACGCACGTGTGCAC...... 26 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AACAAGTTCTCGCTCTCTCGCCT..................................................... 23 0 10 1.00 10 0 0 0 0 0 0 0 0 10 0 0 0 0
.........................................................................................................................................................................................................................CGTCTGTTGAGATACGCACGTGTGC........ 25 0 2 1.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGAGAGCTCAAAAACAAGTTCTAGCT.............................................................. 26 1 6 0.83 5 0 4 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGCACCGAGATCTCCACCG............................................................................................... 22 0 18 0.72 13 0 1 6 0 5 1 0 0 0 0 0 0 0
.................................CCAGGCAAGATGTTTTTCATG.................................................................................................................................................................................................... 21 3 3 0.67 2 0 0 1 0 1 0 0 0 0 0 0 0 0
............CAGAGTCGCGTCCGCTGACCCCCAGGAA.................................................................................................................................................................................................................. 28 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................CAGGAAAGATTTTTGGCATGCATAAACTT........................................................................................................................................................................................... 29 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCGAGAGAACTCAAAAACAAGTT.................................................................... 27 1 15 0.67 10 0 9 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CGAGAGAGCTCAAAAACAAGTTCT.................................................................. 24 0 3 0.67 2 0 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................TTTAGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 25 0 5 0.60 3 0 1 0 0 2 0 0 0 0 0 0 0 0
........................................................................TAGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 23 0 20 0.55 11 0 3 1 2 3 2 0 0 0 0 0 0 0
..........................................................................GTTTCTGTGATCTTATTGTTCTAC........................................................................................................................................................ 24 0 20 0.55 11 0 0 0 0 0 0 11 0 0 0 0 0 0
................................................................................................................................................................................................CGCCTCTCGAGATGTCGCTTACTGT................................. 25 2 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GGTCCGAGAGAGCTCAAAAACAAGTT.................................................................... 26 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAAGCCGCACCGAGATCTCCACCG............................................................................................... 24 0 16 0.50 8 0 1 0 3 3 0 1 0 0 0 0 0 0
.........................................................................................................GGTATGCTACAAAACCGT............................................................................................................................... 18 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCGTCTGTTGAGATACGCACGTGT.......... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCCGTATGCTACAAAACCGTGTGCT.......................................................................................................................... 26 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGAGGTCCGAGAGAGCTCAAAAACAAGT..................................................................... 28 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCCGCACCGAGATCTCCACCG............................................................................................... 23 0 18 0.44 8 0 0 0 2 2 2 1 1 0 0 0 0 0
..............................................................................................................................................................TCCGAGAGAGCTCAAAAACAAGT..................................................................... 23 0 5 0.40 2 0 0 0 0 0 0 0 0 0 2 0 0 0
..................................................................................................................................................................AGAGAGCTCAAAAACAAGTTCT.................................................................. 22 0 5 0.40 2 0 0 0 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................TGTCGTCTGTTGAGATACGCACGGGT.......... 26 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................AAGATTTTTTGCATGCATAAACTTGT......................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................GGAAAGATTTTTGGCATGCATAAACTTGT......................................................................................................................................................................................... 29 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................TTGGCATGCATAAACTTGTACCACTT.................................................................................................................................................................................. 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............GAGTCGCGTCCGCTGACCCCCAGGAA.................................................................................................................................................................................................................. 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................ACTTTAGTTTCTGTGATCTTATTGT............................................................................................................................................................. 25 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................AGAGAGCTCAAAAACAAGTTCTAGCTCT............................................................ 28 1 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0 0 0
......CACCGCCAGAGTCGCGTCCGCTGACCCCC....................................................................................................................................................................................................................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................AAGATTTTTGGCATGCATAAACTTGT......................................................................................................................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 22 0 20 0.30 6 0 1 0 2 2 1 0 0 0 0 0 0 0
...........................................................................................................................................................................AAAAACAAGTTCTCGCTCTCTCGCCTCT................................................... 28 0 10 0.30 3 0 1 0 0 0 2 0 0 0 0 0 0 0
.........................................................................AGTTTCTGTGATCTTATTGTTCTAC........................................................................................................................................................ 25 0 20 0.30 6 0 3 0 0 3 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CGCCTCTCGAGATGTCGTTTACTGT................................. 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCGAGAGAGCTCAAAAACAAGTT.................................................................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCAAGAGAGCTGAAAAACAAGTT.................................................................... 27 2 20 0.25 5 0 4 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CGAGAGTGCTCAAAAACAAGTTCT.................................................................. 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCAAGAGAGCTGAAAAACAAGT..................................................................... 26 2 20 0.25 5 0 3 1 0 1 0 0 0 0 0 0 0 0
........................................AGATTTCTTGCATGCATAAATTTGT......................................................................................................................................................................................... 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................AGGAAAGATTTCTTGCATGCATAAATT............................................................................................................................................................................................ 27 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTGTACGAGTTTAGTTTCTGCGA...................................................................................................................................................................... 23 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TCTCTCGCCTCTCGAGATGTCGTTAACTGT................................. 30 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGTACCGAGATCTCCACCGAGGT........................................................................................... 26 1 17 0.24 4 0 0 0 0 4 0 0 0 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTATTGTT............................................................................................................................................................ 23 0 9 0.22 2 0 0 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCCGCACCGAGATCTCCACCGAGGT........................................................................................... 27 0 14 0.21 3 0 1 0 0 0 0 0 2 0 0 0 0 0
......................................................................................................................................GCCGCACCGAGATCTCCACCGAGGT........................................................................................... 25 0 14 0.21 3 0 1 0 0 1 1 0 0 0 0 0 0 0
..................................................................................................................................AAAAGCCGCACCGAGATCTCCACCGAGGT........................................................................................... 29 0 14 0.21 3 0 0 2 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TCAAAAACAAGTTCTCGCTCTCACGCCT..................................................... 28 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................AAAAACAAGTTCTCGCTCTCTCGCCT..................................................... 26 0 10 0.20 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCGCCTCTCGAGATGTCGCTTACT................................... 24 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATGTGGATAAGTGTCGTCTGT.......................... 21 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................AAAAGCCGCACCGAGATCTCCACCG............................................................................................... 25 0 16 0.19 3 0 0 2 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAAAAGCCGCACCGAGATCTCCACCG............................................................................................... 26 0 16 0.19 3 0 1 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................GTGCTAAAAAAGCCGCACCGAGATCT..................................................................................................... 26 0 12 0.17 2 0 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................CCGAGATCTCCACCG............................................................................................... 15 0 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0 0 0
........................................................................TAGTTTCTGTGATCTTATTGTTCTAC........................................................................................................................................................ 26 0 20 0.15 3 0 0 0 0 0 2 0 0 0 1 0 0 0
.........................................................................................................................................................CGAGGTCCAAGAGAGCTGAAAAACAAGT..................................................................... 28 2 20 0.15 3 0 0 2 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................AAAGCCGCACCGAGATCTCCACCGAGGT........................................................................................... 28 0 14 0.14 2 0 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GGTCCGAGAGAACTCAAAAACAAGTT.................................................................... 26 1 15 0.13 2 0 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGCACCGAGATCTCCACCGAG............................................................................................. 24 0 15 0.13 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTCCGAGAGAACTCAAAAACAAGTT.................................................................... 25 1 15 0.13 2 0 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................CTGTAGTTTCTGTGATCTTATTGT............................................................................................................................................................. 24 1 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAAAAGCCGCACCGAGATCTCCACCG............................................................................................... 27 0 16 0.13 2 0 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTGTTGTTCTAC........................................................................................................................................................ 27 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTAGTGTTC........................................................................................................................................................... 24 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTATTG.............................................................................................................................................................. 21 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GCGCACCGAGATCTCCACCGAGG............................................................................................ 23 1 19 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GGTCCAAGAGAGCTGAAAAACAAGTT.................................................................... 26 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTCTGTGATCTTATTGTTCTAC........................................................................................................................................................ 22 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................AAAAGCTGCACCGAGATCTCCACCG............................................................................................... 25 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CTCCACCGAGGTCCGAGAGAGCTCAA............................................................................. 26 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCTCCACCGAGGTCCGAGAGAGCT................................................................................ 24 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................AGTTTCTGGGATCTTATTGTTCTAC........................................................................................................................................................ 25 1 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CACCGAGATCTCCACCG............................................................................................... 17 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAAAAGCTGCACCGAGATCTCCACCG............................................................................................... 27 1 20 0.10 2 0 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................CCGAGATCTCCACCGAGGTCCGAGAGA................................................................................... 27 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CACCGAGGTCCGAGAGAGCTCAAAA........................................................................... 25 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCATATTGTTCTAC........................................................................................................................................................ 27 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTATTCTACGCATTGCGGTATG........................................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAAGCTGCACCGAGATCTCCACCGAGGT........................................................................................... 28 1 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CTCCACCGAGGTCCGAGAGAGCTCAAA............................................................................ 27 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................GATCTTATTGTTCTACG....................................................................................................................................................... 17 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGATCTCCACCGAGGTCCGAGAGAGCT................................................................................ 27 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................TTTAGTTTTCGTAATCTTATTGTTC........................................................................................................................................................... 25 3 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................AAAACAAGTTCTCGCTCTCTCGCCTT.................................................... 26 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................AGCCGCACCGAGATCTCCACCGAGGTCC......................................................................................... 28 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGAGGTCCGAGAGAACTCAACAACAAGTT.................................................................... 29 2 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACCGAGGTCCGAGAGAACTCAAAAACAAGT..................................................................... 30 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTATTC.............................................................................................................................................................. 21 1 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GTGCTAAAAAAGCCGCACCGAGAT....................................................................................................... 24 0 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TGCTAAAAAAGCCGCACCGAGATCT..................................................................................................... 25 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................GAGGTCCGAGAGAACTCAAAAACAAGT..................................................................... 27 1 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCGAGGGAACTCAAAAACAAGTT.................................................................... 27 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TAAAAAAGCCGCACCGAGATCTCCACCG............................................................................................... 28 0 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCGAGAGAACTCAAAAACAAGTC.................................................................... 27 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCTCGATATGCCTTTAACTG.................................. 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................CTAAAAAAGCCGCACCGAGATCTCCAC................................................................................................. 27 0 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TTAGTTTCTGTGATCTTAT................................................................................................................................................................ 19 0 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGAGCCGCACCGAGATCTCCACCG............................................................................................... 24 1 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTGTGATAAAAAAGCCGCACCGAGAT....................................................................................................... 26 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................TAAGGACGCACCGAGATCTCCACCG............................................................................................... 25 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................GCTAAAAAAGCCGCACCGAGAT....................................................................................................... 22 0 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTGGTCCGAGAGAACTCAAAAACAAGTT.................................................................... 28 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAAAAGGCGCACCGAGATCTCCACCG............................................................................................... 27 1 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAAAAGCCGCACTGAGATCTCCACCGA.............................................................................................. 27 1 18 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................GTGATAAAAAAGCCGCACCGAGAT....................................................................................................... 24 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGCACCGAGATCTCCACCGA.............................................................................................. 23 0 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................AAGCCGCACCGAGATCTCCACTG............................................................................................... 23 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCGCACCGAGATCTCCACCG............................................................................................... 21 0 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCCGCACCGAGATCTCCACAG............................................................................................... 23 1 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................CACTTTGGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 28 1 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................TAGTTTCCGTGATGTTATTGTTCTAC........................................................................................................................................................ 26 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................AAAAAAGCCGCACCGAGAT....................................................................................................... 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................CCGAGATCTCCACCGAGGTCCGAGAG.................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAAAAGCCAAACCGAAATCTCCACCG............................................................................................... 27 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGCGCCGAGATCTCCACCGAGGT........................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................AAAAAGCCGCACCGAGATCT..................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CGAGAGAGCTCAAAAACAAGGTCT.................................................................. 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGATCTCCACCGAGGTCCGAGA..................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CGCTCTCTCGCCTCTC.................................................. 16 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCGAGAGAGCTCA.............................................................................. 17 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GCACCGAGATCTCCACCGAGGT........................................................................................... 22 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................AGTGATAAAAAAGCCGCACCGAGAT....................................................................................................... 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AGCTTCTGTGATCTTATTGTTCTACG....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................GCATTGCGGTATGCTA........................................................................................................................................ 16 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAAAAGCCGCACCGAGATCT..................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................GAGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................AGTTTCTGTCATCTTATTGTTCTAC........................................................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCGAGGTCCGAGAGAGCTCAA............................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................TAAAAAAGCCAAACCGAGATCTCCACCG............................................................................................... 28 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................CGCTCTCTCGCCTCTCGA................................................ 18 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................GGTCCAAGAGAGCTGAAAAACAAGT..................................................................... 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGCACAGAGATCTCCAC................................................................................................. 20 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................TGTGATCTTATTGTTCTACGCAT.................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................CCGAGATCTCCACCGA.............................................................................................. 16 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CTCCACCGAGGTCCGAGAGAG.................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CTCCACCGAGGTCCGAGAGAGCTCAAAA........................................................................... 28 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GAGGTCCAAGAGAGCTGAAAAACAAGTT.................................................................... 28 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGGTCCGAGAGAGCTC............................................................................... 16 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCCGTACCGAGATCTCCACCG............................................................................................... 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCGCTCTCTCGCCTCTCG................................................. 18 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................TATTGTCTGTGATCTTATTGATC........................................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................AAAAAAGCCAAACCGAGATCTCCACCG............................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTCCGAGAGAACTCAAAAACAAGTT.................................................................... 26 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGAGGTCCGAGAGAGCTCAA............................................................................. 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCGAGGTCCGAGAGAGCTCAAAA........................................................................... 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TTTTGTTTCTGTGATCTTATTGTTC........................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGGTCTCCACCGAGGTCCGAGAGAGCT................................................................................ 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCGCACCGAGATCTCCAC................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................AAAGTTGCACCGAGATCTCCACCG............................................................................................... 24 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................GTTTCTGTGATCTTATTGTTCT.......................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAAGCTGCACCGAGATCTCCACCG............................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCTGCACCGAGATCTCCACCG............................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CGAGATCTCCACCGAGGTCCGAGA..................................................................................... 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:19132093-19132342 - dsi_27260 CTACTGGTGGCGGTCTCAGCGCAGGCGACTGGGGGTCCTTT--CTAAA--AAACGTACGTATTTG--AACAT-GGTGA----------AATCAAAGAC-ACTA------GAATAA-CAAGATGCGTAACGCC-ATACGATGTTTTGGCACACGATTTTTTCGGCGTGGCTCTAG-AGGTGGCTCCAGGCTCTCTCGAGTTTTTGTTCAAGAGCGAGAGA--GCGGAGAGCTCTACAGCAA----------------------TTGACAGCAGACAACTCTATGCGTGCACA-CGTGTACTCA
droSec2 scaffold_8971:708-957 + CTACTGGTGGCGGTCTCAGCGCAGGCGACTTGGGGTCCTTT--CTAAA--AAACGTACGTATTTG--AACAT-GGTGA----------AATCAAAGAC-ACTA------GAATAA-CAAGATGCGTAACGCC-ATACGATGTTTTGGCACACGATTTTTTCGGCGTGGCTCTAG-AGGTGGCTCCAGGCTCTCTCGAGTTTTTGTTCAAGAGCGAGAGA--GCGGAGAGCTCTACAGCAA----------------------TTGACAGCAGACAACTCTATGCGTGCACA-CGTGTACTCA
dm3 chr3RHet:1670718-1670980 - TAGCTGCG----CTTTAGGTTCGGCCGACCGGAGCAGCTTATACACAGCCAGC----------TG--AACAG-CGTGC---------GAGACAAAGAC-CCTA------GAATAA-CAAGATGCGTAACGCC-ATACGATTTTTTGGCACACGATTTTTTGGCCGTGGCTCTAG-AGGTGGCTCCAGGCTCTCTCGAATTTTTGTTAGAGAGCGAGAGA--GCGAAGAGCGCTACAGCGAACAGCTCTTTTCAACGCACAAAGTGATAGCAGACAACTGTATGTGTGCACA-CGTATGCTCA
droEre2 scaffold_4770:10442082-10442262 + TTTATATG------------------------------------------AGACCTTTATATTTG--A--AT-AGTTA----------TACCAAAGAC-ACTA------GAATAA-TAAGATGCGTAACGCC-ATACGATTTTTTTGCACACGATTTTTTCGGGCTGGCTCTAG-AGCTGGCTCCAGGCTCTCTCGAATTTTTGTTCAAGAGCCAGAGAAAG-AGAGCGCTCTAGAGCCAG----------------------TGATGC-------------------------------CA
droYak3 2L:20966378-20966583 - AGCGCGGTCGA-----------------TTTGC----TCAT--GTAAA--AAGCATACAGATCTC--TTGAC-GCTTA----------AACCAAAGAC-ATTA------GAATAA-CAAGATGCGTAACGCC-ATACAATTTTTTTGCACACGATTTTTTCGTG-------------CAGACTCCAGGCTCTCTCCAAATTTTGTTCAATAGCCAGAGG--GCGGAGAGCTTTAGAGCCAGCAGCT---------------------------------TATGTCCGCACTTCGTG-CTTCA
droEug1 scf7180000409472:2637-2661 + CTACTGGTGGCGGTCACGAC---------TGGA-------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302086:11590-11800 - AACGTACT---------------------------------------------------TTCTGGCAACTAT-AGTGT----------AACCAAAGAC-ATAA------GAATAT-GAAGATAAATAGCGCC-ATAAGATTTTTTTGCACACGATTTTTTGGTGCTGGCTTTAG-AGCTGGCTCCAGGCTCTCT--------TGCTCAAAAGCCAGAGA--G-AGAGCGCTCTAGAGCCAGCCGCTCTCATGCACG-------CGACAGAACACGATTGGATGTGTGCACA-TGTGTTCTTG
droTak1 scf7180000411080:3454-3671 - TAGAAAGCGCAGCTTGCAGT---------------------------------------------------T-GGTCA----------GTGCAAAGAC-ATTA------GAATAT-GAAGATGGATAACGCC-ATACGATTTTTTTGCACACAATTTTTTGGTGCTGGCCCTAG-AGCTGGCTCCAGGCTCTCT--------TGCTCAAAAGCCAGAGA--G-AGAGCGCTCTAGAGCCAGCCGCTCTCATTCACGCATACAGAGACAGAAGACGATTGTATGTGTGCACA-TGTATTCTCG
droEle1 scf7180000491249:6756290-6756325 + TCCTTTCTTGAAG--------------------------------------CACCTACGTATTTG--AACAT-GATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000772903:10366-10625 - CCAATTCTGGTCGCTTCTGG----TCGATCGC--CAGCTTCAAGCGGTCCAGTTGTTCGCAGTCG-----AT-CGTAG----------AATCAAAGACCAATA------TAATCTCTAAGATGCGTAACGCC-TTACGATTTTTTTGCACACGAATTTTTTATGCTGGCTTTTC-AACTGGCTTTTCGCTCTCT--------TGCCCAAAAGCCAGCGA--G-AGAGCGCTCTAGAACCAGCCGCTCTCTTGCACGCATACTGCGACATCCGGCGACTGTATGTGTGCACA-TGTATTCACA
droFic1 scf7180000452103:34219-34238 + CTGCTGGTGGCGGTCACAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301605:644-869 - TCCTAA-----------------------------------------A--ATAGGTGCCCA------AA-ATGGGTAG----------AGCCAAAGAC-AATA------GAGTTA-TAAGATAGGTAACGCC-ATACGATTTTTTTGCACACGATTTTTTCGTGCTGGCTTTTG-AACTGGCTCCAGGCTCTCTTAAA-TGTTGTTCAAAAGCCAGCGA--AGAGAGCGCTCTAGAGCCAGCCGTTCTCTTGTACGCATTCAGCGAC-GCCGCCGGGTGTTTGTGTGCAAA-CGGG-CCTCA
droAna3 scaffold_13337:18013357-18013382 + CTGCTGGTGGCAGTCACAACTGGGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396574:333394-333436 - CAACAACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAACAAATAGCTCTATGTGTGCGTC-CGTGTTCT--
dp5 XL_group1a:1533477-1533652 - GG-------------------------------------------------------------------------TAG----------AAGCAAAAAC-AATATAAATACAATAG-GAAGATGAGTAACGCCCACACATTTCAATGATACATGACTTTAGCGGCTTGGCTTTTGAAAGTGGCTCCAGGCTCTCTTCAAATTTTGTTGAAGAGCGGCAG-------------------CGGACGACTCAGATT---------------------TGAATGCAGGCGTGGACA-CGTAATCTCA
droPer2 scaffold_11159:471-668 + AAAATAATGAAAT---------------------------------------------------------------------------AAGCGAAGAT-AATAT-----GAGTAAGTAAGATGAGTAACGCC-ATACAAATTTTTTGTACTTGAATTTTCT-GACCGGCTCAAG-AGCTGACTCCAGGCTCTCTTGAAATTTTGTTCAAGAGCCAGCCAGAGCG----GCTATACAT---GAGGCTGAGATGCTCG-------CAATGCCAAAAAATTGTATTAGTTCATT-AGTTT-----
droWil2 scf2_1100000004953:719854-719903 - TTGT------------------------------------------------------------------------------------------------------------------------------------------------------------CGACATTGCTATAG-CGTTTGCCCGAAGCTTACTCAAGGTTTTGTTC-----------------------------------------------------------------------------------------------
droVir3 scaffold_12723:4128391-4128454 + CAACTGGGTG--GATTCAGT--TGGGAACTGGG------------------------CCGGTGTT--TTACC-ATTGAAATATGGCAAAGACAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:14332299-14332329 + CTGCTGGTGGCAGTCACG---TAAGGAGCTGGA-------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14375:5849-5866 + CTACTGGTGGCAGTCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTACTGGTGGCGGTCTCAGCGCAGGCGACTGGGGGTCCTTT--CTAAA--AAACGTACGTATTTG--AACAT-GGTGA----------AATCAAAGAC-ACTA------GAATAA-CAAGATGCGTAACGCC-ATACGATGTTTTGGCACACGATTTTTTCGGCGTGGCTCTAG-AGGTGGCTCCAGGCTCTCTCGAGTTTTTGTTCAAGAGCGAGAGA--GCGGAGAGCTCTACAGCAA----------------------TTGACAGCAGACAACTCTATGCGTGCACA-CGTGTACTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................TAG-AGGTGGCTCCAGGCTC...............................................................................................................192070.50141000001410000000000000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGAT..................................................................................................................................................................252057.40114800000000001148000000
................................................................................................................TAA-CAAGATGCGTAACGCC-.........................................................................................................................................................................192035.357070000070700000000000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATGT................................................................................................................................................................27330.3391000050000086000000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATG.................................................................................................................................................................26320.0060000150000053100000
.............................................................................................................GAATAA-CAAGATGCGTAACGCC-AT.......................................................................................................................................................................242017.5535100012000000339000000
........................................................................................................................................................................................................................................TACAGCAA----------------------TTGACAGCAGACAACTCTA.....................27210.0020000000000000128000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGA............................................................................23109.30930001100152319780100000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATGTT...............................................................................................................................................................2837.3322000000000022000000
.............................................................................................................GAATAA-CAAGATGCGTAACGCC-ATACG....................................................................................................................................................................27204.8096000009600000000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGAT..................................................................................................................................................................26204.4088000088000000000000
.......................................................................................................................................................................................CCAGGCTCTCTCGAGTTT.....................................................................................................18203.9579000078000001000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAG...........................................................................24103.0030000200321035140000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGG.............................................................................22122.5831000100021250911000
......................................................................................................................................................................................................................................TCTACAGCAA----------------------TTGACAGCAGACAACTCTA.....................2922.50500000001000013000
........................................................................................................................................................................................................................................TACAGCAA----------------------TTGACAGCAGACAACTCTAT....................2822.50500000020000030000
........................................................................................................................................................................................................................................TACAGCAA----------------------TTGACAGCAGACAACTCT......................2622.50500000000000023000
...........................................................................................................................................TGTTTTGGCACACGATTTTTTCGGC..........................................................................................................................................2522.50500000030020000000
.......................................................................................................................................................................................................................................................................TGACAGCAGACAACTCTATGCGTGC..............2522.50500000012200000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAGA..........................................................................25102.402400010046652000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCTC......................................................................................................................25152.2734000100002140251000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGTGGC........................................................................................................................27162.25360000001115123040000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGGTGGC........................................................................................................................25162.0032013000133103053000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGGA............................................................................24102.002000000036560000000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................23191.89360010000441242000000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGTG..........................................................................................................................25191.683200100085660060000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGGAG...........................................................................25101.601600000041253010000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAGAGC........................................................................2781.381101010013302000000
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GCGGA............................................................................25101.301300000012730000000
............................................................................................................................................................................................................TTCAAGAGCGAGAGA--GCGGAGAGCTC......................................................................26101.201200010013313000000
......................................................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGA--GCGGA............................................................................26101.201200000025500000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCTCCA....................................................................................................................27141.141600000020741020000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGGTGGC........................................................................................................................26161.131800100062113040000
.............................................................................................................................................TTTTGGCACACGATTTTTTCGGCG.........................................................................................................................................24151.071600000030362110000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGGTG..........................................................................................................................24201.052100200052822000000
.......................................................................................................................................................................................................................................................................TGACAGCAGACAACTCTATGCGTGCA.............2621.00200000000110000000
.......................................................................................................................................................................................................................................................................TGACAGCAGACAACTCTATGCG.................2221.00200000010001000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAGAG.........................................................................2681.00800000001142000000
.................................................................................................................................................................GGCGTGGCTCTAG-AGGTGGC........................................................................................................................20200.9519000019000000000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCT.......................................................................................................................24180.941700000022310063000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGGTG..........................................................................................................................23200.901800100061531010000
.............................................................................................................GAATAA-CAAGATGCGT................................................................................................................................................................................16200.9018000000000018000000
..........................................................................................................................................................................................................TGTTCAAGAGCGAGAGA--GCGGAGAGC........................................................................2680.88700000010141000000
......................................................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGA--GCGGAG...........................................................................27100.70700000023110000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCG..............................................................................21130.69900000001404000000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGGTGG.........................................................................................................................24190.681300000020312050000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGT...........................................................................................................................24190.681300800011300000000
..............CTCAGCGCAGGCGACTGGGGGTC.........................................................................................................................................................................................................................................................................2330.67200200000000000000
.....................................................................................................................AAGATGCGTAACGCC-ATACGATGT................................................................................................................................................................2430.67200000000002000000
.....................................................................................................................AAGATGCGTAACGCC-ATACGATGTT...............................................................................................................................................................2530.67200000000002000000
...............TCAGCGCAGGCGACTGGGGGTCCTTT--C..................................................................................................................................................................................................................................................................2730.67200000000000011000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGATGT................................................................................................................................................................2830.67200000010001000000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGGTGG.........................................................................................................................25190.631200000032015010000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGTGG.........................................................................................................................26180.611100000032230010000
.............................................................................................................GAATAA-CAAGATGCGTAACGCC-ATA......................................................................................................................................................................25200.6012000000001200000000
.............................................................................................................................................TTTTGGCACACGATTTTTTCGGC..........................................................................................................................................23150.60900000034110000000
...........................................................................................................................................................................TAG-AGGTGGCTCCAGGCTCTCTCG..........................................................................................................24200.6012000000000012000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCTCC.....................................................................................................................26140.57800210011210000000
.................................................................................................................AA-CAAGATGCGTAACGC...........................................................................................................................................................................17200.5511000000000011000000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGGTGGCTC......................................................................................................................27150.53800000000002060000
........................................................................................................................................................................................................................................TACAGCAA----------------------TTGACAGCAGACAACTCTT.....................2720.50100000000000001000
........................................................................................................................................................................................................................................TACAGCAA----------------------TTGACAGCAGACAACTCTATG...................2920.50100000000000001000
............................................................................................................................................................................................................................................................................GCAGACAACTCTATGCG.................1720.50100000000001000000
......................................................................................................................................................................................................................................TCTACAGCAA----------------------TTGACAGCAGACAACTCT......................2820.50100000000000001000
...........................................................................................................................................TGTTTTGGCACACGATTTTTTCGGCGT........................................................................................................................................2720.50100000000100000000
...........................................................................................................................................................................................................................................AGCAA----------------------TTGACAGCAGACAACTCTA.....................2420.50100000000000001000
..............................................................................................................................................................................................................................................AA----------------------TTGACAGCAGACAACTCTATGCG.................2520.50100000010000000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTCC.....................................................................................................................25140.50700000011301010000
......................................................................................................................................................................................................................................................................TTGACAGCAGACAACTCTATGCGTGCA.............2720.50100000010000000000
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GCGGAG...........................................................................26100.50500000013000010000
.............................................................................................................................................................................................................................................................................CAGACAACTCTATGCGTGCACA-CGTG......2620.50100000010000000000
...........................................................................................................................................TGTTTTGGCACACGATTTTTTCGGCG.........................................................................................................................................2620.50100000000001000000
.............................................................................................................GAATAA-CAAGATGCGTAACGCC-ATACGA...................................................................................................................................................................28200.501000000040501000000
...............................................................................................................................................TTGGCACACGATTTTTTCGGCGTGGC.....................................................................................................................................26170.47800030000004100000
.............................................................................................................................................TTTTGGCACACGATTTTTTCGGCGT........................................................................................................................................25150.47700020001130000000
............................................................................................................................................................................................................TTCAAGAGCGAGAGA--GCGGAGAGC........................................................................24130.46600110001111000000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGA...................................................................................................................................................................24200.45900080000000100000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGC........................................................................................................................23180.44800010011201020000
.............................................................................................................................................................TTTCGGCGTGGCTCTAG-AGGTGGC........................................................................................................................24160.44700000022002001000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTCCA....................................................................................................................26140.43600000011111010000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGT............................................................................23120.42500000000001022000
................................................................................................................TAA-CAAGATGCGTAACGCC-AT.......................................................................................................................................................................21200.40800000000008000000
...............................................................................................................................................TTGGCACACGATTTTTTCGGCGTGGCTC...................................................................................................................................28150.40600010000203000000
........................................................................................................................................................GATTTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................25160.38600000001410000000
...............................................................................................................................................TTGGCACACGATTTTTTCGGCGTGGCT....................................................................................................................................27160.38600000000202020000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAT...........................................................................24110.36400000000010003000
.............................................................................................................................................................................................................TCAAGAGCGAGAGA--GCGGAGAGCTCT.....................................................................26110.36400000000013000000
..................................................................................................................A-CAAGATGCGTAACGCC-AT.......................................................................................................................................................................19200.35700000000007000000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGGT...........................................................................................................................23200.35700200000500000000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGGTGGCTC......................................................................................................................28150.33500000000000050000
.......TGGCGGTCTCAGCGCAGGCGAC.................................................................................................................................................................................................................................................................................2230.33100000000001000000
......................................................................................................................................................................................................................................................................TTGACAGCAGACAACTCTATGCGTGCC.............2730.33100000000000010000
..............................................................................................................................AACGCC-ATACGATGT................................................................................................................................................................1530.33100000000001000000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGG.............................................................................23120.33400000000130000000
...............TCAGCGCAGGCGACTGGGGGTCCTTT--A..................................................................................................................................................................................................................................................................2730.33100000000000010000
..........................................................................................................................................................................................................TGTTCAAGAGCGAGAGA--GCGGAGAGCT.......................................................................2760.33200000000000020000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGATG.................................................................................................................................................................2730.33100000010000000000
.TACTGGTGGCGGTCTCAGCGCAGGCG...................................................................................................................................................................................................................................................................................2630.33100000000000010000
...........................................................................................................................CGTAACGCC-ATACGATGT................................................................................................................................................................1830.33100000000001000000
......................................................................................................................AGATGCGTAACGCC-ATACGATGT................................................................................................................................................................2330.33100000000001000000
....TGGTGGCGGTCTCAGCGCAGGCGA..................................................................................................................................................................................................................................................................................2430.33100000000001000000
........................................................................................................................ATGCGTAACGCC-ATACGATGT................................................................................................................................................................2130.33100000000001000000
.............................................................................................................................................................TTTCGGCGTGGCTCTAG-AGGTGG.........................................................................................................................23190.32600000000201030000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................22200.30600200011110000000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGG............................................................................................................................21200.30612000000120000000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AG.............................................................................................................................21200.30610100020020000000
...............................................................................................................................................TTGGCACACGATTTTTTCGGCGTGG......................................................................................................................................25170.29500010000112000000
.......................................................................................................................................................CGATTTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................26140.29400000031000000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GC...............................................................................20140.29400100002001000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTCCAGGC.................................................................................................................29110.27300000012000000000
.............................................................................................................................................................................................................TCAAGAGCGAGAGA--GCGGAGAGCTC......................................................................25110.27300000001002000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGT.............................................................................22150.27400000000001003000
..................................................................................................................................................................................................................................GAGCTCTACAGCAA----------------------TTGACAGCAGA.............................2540.25100000000100000000
......................................................................................................................................................................................TCCAGGCTCTCTCGAGTTTTTGTTCAA.............................................................................................2740.25100000000000010000
.............................................................................................................................................................................................................................GCGGAGAGCTCTACAGCAA----------------------TTGACAGC................................2740.25100000000010000000
...................................................................................................................................................................................................................................AGCTCTACAGCAA----------------------TTGACAGCAGA.............................2440.25100000010000000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAA...........................................................................24120.25300000000111000000
.....................................................................................................................................................................TGGCTCTAG-AGGTGGCTCCAG...................................................................................................................21200.25500000000104000000
.....................................................................................................................................................................TGGCTCTAG-AGGTGGCTCCAGGC.................................................................................................................23200.25500000000005000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCT.......................................................................................................................23180.22400000000200020000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGG.........................................................................................................................22200.20400000000003010000
.............................................................................................................................................................TTTCGGCGTGGCTCTAG-AGGT...........................................................................................................................21200.20401200000010000000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGGAGA..........................................................................26100.20200000000200000000
.................................................................................................................................................................................................TCGAGTTTTTGTTCAAGAGCGAGA.....................................................................................2450.20100000000001000000
.............................................................................................................................................................TTTCGGCGTGGCTCTAG-AGGTG..........................................................................................................................22200.20400000011101000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTG..........................................................................................................................21200.20400000000112000000
..................................................................................................................A-CAAGATGCGTAACGCC-ATA......................................................................................................................................................................20200.20400000000004000000
..............................................................................................................................................TTTGGCACACGATTTTTTCGGCGTGGC.....................................................................................................................................27150.20300020000100000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAC...........................................................................24100.20200000000000002000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGAA.......................................................................................................................24200.20400000000000031000
.............................................................................................................................................................TTTCGGCGTGGCTCTAG-AGGTGGCT.......................................................................................................................25160.19300000010000020000
..............................................................................................................................................TTTGGCACACGATTTTTTCGGCGT........................................................................................................................................24160.19300000000210000000
.............................................................................................................................................................................................................TCAAGAGCGAGAGA--GCGGAGAGCT.......................................................................24110.18200100000001000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCTCCAGGC.................................................................................................................30110.18200000020000000000
.............................................................................................................................................................................................................TCAAGAGCGAGAGA--GCGGAGA..........................................................................21170.18300000000120000000
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GCGG.............................................................................24120.17200000000110000000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGGAA...........................................................................25120.17200000000110000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGTT...........................................................................24130.15200000000000011000
......................................................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGA--GCG..............................................................................24130.15200000000200000000
......................................................................................................................................................ACGATTTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................27130.15200000001100000000
...................................................................................................................................................................CGTGGCTCTAG-AGGTGGCTCCAGGCTC...............................................................................................................27200.15300000000000021000
................................................................................................................TAA-CAAGATGCGTAACG............................................................................................................................................................................17200.15300000030000000000
....................................................................................................................................................................GTGGCTCTAG-AGGTGGCTCCAGGCTCT..............................................................................................................27200.15300000000000030000
..................................................................................................................................................................................TGGCTCCAGGCTCTCT............................................................................................................16200.15300000000003000000
.............................................................................................................GAATAA-CAAGATGCGTAACG............................................................................................................................................................................20200.15300000003000000000
......................................................................................................................................................................................................................AGAGA--GCGGAGAGCTCTACAGC................................................................22200.15300000000003000000
....................................................................................................................................................ACACGATTTTTTCGGCG.........................................................................................................................................17200.15300000000003000000
................................................................................................................................................................CGGCGTGGCTCTAG-AGGTG..........................................................................................................................19200.15300000000300000000
.............................................................................................................................................................................................................TCAAGAGCGAGAGA--GCGGAGAGC........................................................................23140.14200000000200000000
.............................................................................................................................................TTTTGGCACACGATTTTTTCGGCGTGG......................................................................................................................................27140.14200000010010000000
..............................................................................................................................................TTTGGCACACGATTTTTTCGGCGTGG......................................................................................................................................26150.13200010010000000000
............................................................................................................................................................................................................TTCAAGAGCGAGAGA--GCGGAG...........................................................................21150.13200000000001001000
................................................................................................................................................TGGCACACGATTTTTTCGGCGTGGCT....................................................................................................................................26160.13200000000110000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--.................................................................................18160.13200000000110000000
...............................................................................................................................................TTGGCACACGATTTTTTCGGCGTGGG.....................................................................................................................................26170.12200000002000000000
................................................................................................................................................TGGCACACGATTTTTTCGGCGTGG......................................................................................................................................24170.12200000001001000000
.............................................................................................................................................................................................................TCAAGAGCGAGAGA--GCGGA............................................................................19170.12200000000020000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGTTT..........................................................................25170.12200000000000020000
..............................................................................................................................................TTTGGCACACGATTTTTTCGGC..........................................................................................................................................22180.11200000000110000000
............................................................................................................................................................................................................TTCAAGAGCGAGAGA--GCGGAGAGCTCTA....................................................................2890.11100000000010000000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGC...........................................................................................................................24190.11200200000000000000
......................................................................................................................................................................................................TTTTTGTTCAAGAGCGAGA.....................................................................................19190.11200000010010000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGA.....................................................................................16190.11200000001001000000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGTT..........................................................................................................................25190.11200200000000000000
................................................................................................................TAA-CAAGATGCGTAACGCC-C........................................................................................................................................................................20200.10200000200000000000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AG.............................................................................................................................20200.10200000001100000000
....................................................................................................................................................................GTGGCTCTAG-AGGTGGCTCCAGGC.................................................................................................................24200.10200000000001010000
......................................................................................................................................................ACGATTTTTTCGGCGTGGCTC...................................................................................................................................21200.10200000000002000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGG............................................................................................................................19200.10200000010100000000
..........................................................................................................................................................TTTTTTCGGCGTGGCTC...................................................................................................................................17200.10200000020000000000
......................................................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGA--GCTC.............................................................................25200.10200000000110000000
...................................................................................................................................................................CGTGGCTCTAG-AGGTGGCTCCA....................................................................................................................22200.10200000000000020000
...............................................................................................................................................TTGGCACACGATTTTTTCGGC..........................................................................................................................................21200.10200000002000000000
..........................................................................................................................................................................................................TGTTCAAGAGCGAGAGA--GCGGAGA..........................................................................24100.10100000010000000000
...........................................................................................................................................................................TAG-AGGTGGCTCCAGGCTCT..............................................................................................................20200.10200200000000000000
...........................................................................................................................................................TTTTTCGGCGTGGCTCTAG-AGGTA..........................................................................................................................24200.10200000000000020000
......................................................................................................................AGATGCGTAACGCC-AT.......................................................................................................................................................................16200.10200000000002000000
..............................................................................................................................................................................................................CAAGAGCGAGAGA--GCGGAGAGCTCTA....................................................................26100.10100000000001000000
......................................................................................................................................................ACGATTTTTTCGGCGTGGC.....................................................................................................................................19200.10200000000002000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGATC.................................................................................................................................................................27200.10200000000002000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAGATA........................................................................27110.09100000000010000000
.....................................................................................................................................................CACGATTTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................28110.09100000010000000000
................................................................................................................................................................CGGCGTGGCTCTAG-AGGTGGCTCCAGGC.................................................................................................................28110.09100000000000010000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGAGAT.........................................................................26110.09100000000001000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTCCAGG..................................................................................................................28120.08100000000000010000
.....................................................................................................................................................CACGATTTTTTCGGCGTGGCTCTAG-A..............................................................................................................................26120.08100000010000000000
................................................................................................................................................................CGGCGTGGCTCTAG-AGGTGGCTCCAGG..................................................................................................................27120.08100000000000010000
......................................................................................................................................................................................................TTTTTGTTCAAGAGCGAGAGA--GCGG.............................................................................25120.08100000001000000000
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GCGGT............................................................................25120.08100000010000000000
...................................................................................................................................................CACACGATTTTTTCGGCGTGGCTCTAG-A..............................................................................................................................28120.08100000010000000000
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GCG..............................................................................23130.08100000000100000000
......................................................................................................................................................ACGATTTTTTCGGCGTGGCTCTAG-AGGT...........................................................................................................................28130.08100000001000000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTCCAG...................................................................................................................27140.07100000000010000000
.............................................................................................................................................TTTTGGCACACGATTTTTTCGGCGTGGC.....................................................................................................................................28140.07100010000000000000
..........................................................................................................................................................................................................TGTTCAAGAGCGAGAGA--GC...............................................................................19140.07100000000001000000
................................................................................................................................................................CGGCGTGGCTCTAG-AGGTGGCTCCA....................................................................................................................25140.07100000010000000000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GC...............................................................................21140.07100000000001000000
................................................................................................................................................................CGGCGTGGCTCTAG-AGGTGGCTCCAG...................................................................................................................26140.07100000000000001000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGGTGGCTCC.....................................................................................................................28140.07100000001000000000
.....................................................................................................................................................CACGATTTTTTCGGCGTGGCTCTAG-AA.............................................................................................................................27140.07100000000000010000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCTCCAG...................................................................................................................28140.07100000001000000000
..............................................................................................................................................................TTCGGCGTGGCTCTAG-AGGTGGCTCCAA...................................................................................................................28140.07100000000000010000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--GCGGATTT.........................................................................26140.07100000001000000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTCCAA...................................................................................................................27140.07100000000000010000
......................................................................................................................................................ACGATTTTTTCGGCGTGGCTCTAG-...............................................................................................................................24150.07100000000001000000
............................................................................................................................................................................................................TTCAAGAGCGAGAGA--GCGGAGA..........................................................................22150.07100000000001000000
...............................................................................................................................................................TCGGCGTGGCTCTAG-AGGTGGCTC......................................................................................................................24150.07100000000000010000
..........................................................................................................................................................TTTTTTCGGCGTGGCTCTAG-AGGTGGCTC......................................................................................................................29150.07100000010000000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAGA--G................................................................................19150.07100000000001000000
................................................................................................................................................TGGCACACGATTTTTTCGGCGTGGCTC...................................................................................................................................27150.07100000000001000000
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--.................................................................................19160.06100000010000000000
.........................................................................................................................................................................................................TTGTTCAAGAGCGAGAG....................................................................................17160.06100000000001000000
..................................................................................................................................................................................................................AGCGAGAGA--GCGGAGAGCTCTACAGC................................................................26160.06100000000001000000
............................................................................................................................................................TTTTCGGCGTGGCTCTAG-AGGTGGCC.......................................................................................................................26160.06100100000000000000
droSec2
CTACTGGTGGCGGTCTCAGCGCAGGCGACTTGGGGTCCTTT--CTAAA--AAACGTACGTATTTG--AACAT-GGTGA----------AATCAAAGAC-ACTA------GAATAA-CAAGATGCGTAACGCC-ATACGATGTTTTGGCACACGATTTTTTCGGCGTGGCTCTAG-AGGTGGCTCCAGGCTCTCTCGAGTTTTTGTTCAAGAGCGAGAGA--GCGGAGAGCTCTACAGCAA----------------------TTGACAGCAGACAACTCTATGCGTGCACA-CGTGTACTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACG....................................................................................................................................................................23203.907800735
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGAT..................................................................................................................................................................25202.4549016033
........................................................................................................................................................................CTCTAG-AGGTGGCTCCAGGCTCTC.............................................................................................................24201.302626000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATGT................................................................................................................................................................2790.7871240
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATG.................................................................................................................................................................2690.6763030
........................................................................................................................................................................CTCTAG-AGGTGGCTCCAGGCTCTCTC...........................................................................................................26200.2044000
..................................................................................................................A-CAAGATGCGTAACGCC-ATACGAT..................................................................................................................................................................24200.2041030
.TACTGGTGGCGGTCTCAGCG.........................................................................................................................................................................................................................................................................................2080.1310100
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATGTTG..............................................................................................................................................................2990.1111000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGATGTT...............................................................................................................................................................2890.1111000
..................................................................................................................A-CAAGATGCGTAACGCC-ATACGATGT................................................................................................................................................................2690.1111000
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GC...............................................................................22200.1021010
...........................................................................................................................................................................TAG-AGGTGGCTCCAGGCTCTC.............................................................................................................21200.1022000
....................................................................................................CTA------GAATAA-CAAGATGCGTAA..............................................................................................................................................................................21200.1020200
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGGAGAA.........................................................................27130.0810100
............................................................................................................................................................................................................TTCAAGAGCGAGAGA--GCGGAGAGCTC......................................................................26150.0711000
.........................................................................................................................................................ATTTTTTCGGCGTGGCTCTAG-AGG............................................................................................................................24190.0510010
.......................................................................................................................................................................................................TTTTGTTCAAGAGCGAGAGA--GCG..............................................................................23190.0510100
.................................................................................................C-ACTA------GAATAA-CAAGATG...................................................................................................................................................................................18200.0510001
.............................................................................................................................................TTTTGGCACACGATTTTTTCGGCGTG.......................................................................................................................................26200.0511000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGA...................................................................................................................................................................24200.0510100
.......................................................................................................................................................................GCTCTAG-AGGTGGCTCCAGGC.................................................................................................................21200.0511000
...................................................................................................................................................................................GGCTCCAGGCTCTCTCGAGT.......................................................................................................20200.0511000
...................................................................................................................................................................CGTGGCTCTAG-AGGTGGCTCCA....................................................................................................................22200.0510001
...............................................................................................................................................TTGGCACACGATTTTTTCGGCGTGGCTC...................................................................................................................................28200.0511000
....................................................................................................................CAAGATGCGTAACGCC-ATACGA...................................................................................................................................................................22200.0511000
........................................................................................................................ATGCGTAACGCC-ATACGA...................................................................................................................................................................18200.0511000
....................................................................................................................................................................GTGGCTCTAG-AGGTGGCTCCAG...................................................................................................................22200.0511000
.........................................................................................................................................................................TCTAG-AGGTGGCTCCAGGCTC...............................................................................................................21200.0511000
.................................................................................................................AA-CAAGATGCGTAACGCC-ATACGAC..................................................................................................................................................................25200.0511000
...................................................................................................................................................................CGTGGCTCTAG-AGGTGGCTCCAG...................................................................................................................23200.0511000
....................................................................................................................................................................................GCTCCAGGCTCTCTCGAGTTT.....................................................................................................21200.0511000
....................................................................................................................................................................GTGGCTCTAG-AGGTGGCTCCA....................................................................................................................21200.0511000
...................................................................................................................................................................CGTGGCTCTAG-AGGTGGCTCC.....................................................................................................................21200.0510001
..........................................................................................TCAAAGAC-ACTA------GAATAA-CAA.......................................................................................................................................................................................21200.0510100
........................................................................................................................................................................................................TTTGTTCAAGAGCGAGAGA--GCGG.............................................................................23200.0511000
................................................................................................AC-ACTA------GAATAA-CAAGATGCGTAACGCC-.........................................................................................................................................................................28200.0511000
dm3
TAGCTGCG----CTTTAGGTTCGGCCGACCGGAGCAGCTTATACACAGCCAGC----------TG--AACAG-CGTGC---------GAGACAAAGAC-CCTA------GAATAA-CAAGATGCGTAACGCC-ATACGATTTTTTGGCACACGATTTTTTGGCCGTGGCTCTAG-AGGTGGCTCCAGGCTCTCTCGAATTTTTGTTAGAGAGCGAGAGA--GCGAAGAGCGCTACAGCGAACAGCTCTTTTCAACGCACAAAGTGATAGCAGACAACTGTATGTGTGCACA-CGTATGCTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGAT..................................................................................................................................................................2620288.505770000003000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736000000000000000000000000000000000
.........................................................................................................................................................................................................TTGTTAGAGAGCGAGAGA--GCGAAGAGC........................................................................272045.20904000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000020000000008960000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGATT.................................................................................................................................................................272037.807560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGATAGCAGACAACTGTATGTGTGC..............252032.6565300000000000000000000000000000000000040000880000000720000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000007600000104000000000000000000000000000000000000000000000000000000000000000007816600000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000
.........................................TACACAGCCAGC----------TG--AACAG-CGTGC---------GA.....................................................................................................................................................................................................................26125.00250000000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300030000002000220000400000000000000000000000000000000000000000000000000000000000000000000000000000001000000400000000000000000010000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGA...................................................................................................................................................................252024.804960000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001130003170000000000000000900000000000000000000000003600000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTGTTAGAGAGCGAGAGA--GC...............................................................................202017.503500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000028000000006900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTGTTAGAGAGCGAGAGA--GCGAAGA..........................................................................252017.103420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000029200045000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACG....................................................................................................................................................................242015.45309000000000000000000000000000000000000000030200000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATACACAGCCAGC----------TG--AACAG-CGTG.................................................................................................................................................................................................................................25115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000030000000000000000000000000000000000000000000000000000000000000400000000100000000000000000000000000000000000000000000000000000000000000000000002000000110000000000000000101000000
...........................................................................................................................................TTTTTTGGCACACGATTTTTTGGC...........................................................................................................................................242015.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000350000000000000000000000000000128016000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000001000000
.......................................TATACACAGCCAGC----------TG--AACAG-CGT..................................................................................................................................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000100000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000104000000200000000000000000000000000
..................................................................................................................................................................................................................................................................CAAAGTGATAGCAGACAACTGTATG...................252010.05201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000001990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TG--AACAG-CGTGC---------GAGACAAAGAC-CC.........................................................................................................................................................................................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000002000000
....................TCGGCCGACCGGAGCAGCTTATACACA...............................................................................................................................................................................................................................................................27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060100000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATACACAGCCAGC----------TG--AACAG-CGTGC---------.......................................................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000100000000
..............................................................................................................................................TTTGGCACACGATTTTTTGGCCGTGGC.....................................................................................................................................27208.45169000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000
..............TTAGGTTCGGCCGACCGGAGCAGC........................................................................................................................................................................................................................................................................24208.0516100000000000000000000010000000000000010000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100010001200100110000010000000000000000000000000000000000401010002000000002100020500080430060101413100000000210000000000000000000000000000000000000000000000000100000504300000010113000000000000023005000000
.............TTTAGGTTCGGCCGACCGGAGCAGC........................................................................................................................................................................................................................................................................25208.001600000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000002000000000000000000400101010100200050100001320000000000000000000000000300000072121000006300002010100900003095708000100000000000000000000000000000000000000000000000000000000000006000002047101100900000000000000000410000000
.......................GCCGACCGGAGCAGCTTATACACAG..............................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....TGCG----CTTTAGGTTCGGCCGACCGGA.............................................................................................................................................................................................................................................................................25206.801360000000000010000000000000000010000000000000000300000000000000000000000000000000000030000000000500000000000000000000000000000000000000000000000300011200120100000000000000000001000000000000013420001021000010040001000001100950000040000000001000000001000000000000000000000000000000000000000000000011012000000400000000000000011301000000
.........................................................................................................................................................................................................TTGTTAGAGAGCGAGAGA--GCGA.............................................................................22206.05121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTATACACAGCCAGC----------TG--AACAG-CGTG.................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TG--AACAG-CGTGC---------GAGACAAAGAC-A..........................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................TTTTTGTTAGAGAGCGAGAGA--GCGAA............................................................................26205.351070000000000000000000000020000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060046000000000000000024000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000002600000000
..........................GACCGGAGCAGCTTATACACAGCCAGC----------...............................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................TACACAGCCAGC----------TG--AACAG-CGTGC---------G......................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTATACACAGCCAGC----------TG--AACAG-C....................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TG--AACAG-CGTGC---------GAGACAAAGAC-CCT........................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001030000000
....................................................................ACAG-CGTGC---------GAGACAAAGAC-CCTA------GA...............................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGATAGCAGACAACTGTATGTGTGCA.............26204.9098000000000000000000000000000000000000000000000400000000000000000000000000000000000000059000000000000000000000000003300000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATACACAGCCAGC----------TG--AACAG-CGTGC---------GA.....................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
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.......................................................................................................................................................................................................TTTTGTTAGAGAGCGAGAG....................................................................................19200.60120000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTTTGGCACACGATTTTTTGG............................................................................................................................................22200.601200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................TCGAATTTTTGTTAGAGAGCGAGAGA--.................................................................................26200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000
..........................................................................................................................................................................................................TGTTAGAGAGCGAGAGA--GCGAAGAGCG.......................................................................27200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000406000000000000000000000000
................................................................................................................................................................................................................................................................CACAAAGTGATAGCAGACAAC.........................21200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TTTGTTAGAGAGCGAGAGA--GCGAAGAGC........................................................................28200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TACAGCGAACAGCTCTTTTCAACGCA............................................26200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GATAGCAGACAACTGTATGTGTGC..............24200.55110000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCGAGAGA--GCGAAGAGCGCTACAGC................................................................25200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000102000000
...........................................................................................................................................................TTTTTGGCCGTGGCTCTAG-AGGTGGCT.......................................................................................................................27200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AACGCACAAAGTGATAGCAGACAAC.........................25200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TTTGTTAGAGAGCGAGAGA--GC...............................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000100000000000000000000000006000000
...................................................................................................................................................................CGTGGCTCTAG-AGGTGGCTCCAGGC.................................................................................................................25200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
......................................................................................................................AGATGCGTAACGCC-ATACGAT..................................................................................................................................................................21200.55110000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000500000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCGACCGGAGCAGCTTATAC..................................................................................................................................................................................................................................................................20190.53100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100270000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TTGGCCGTGGCTCTAG-AGGTGG.........................................................................................................................22200.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTGTTAGAGAGCGAGAGA--GCGAT............................................................................23200.50100000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GATTTTTTGGCCGTGGCTCTAG-AGGT...........................................................................................................................26200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.................................................................................................................................................................................................TCGAATTTTTGTTAGAGAGCGAGA.....................................................................................24200.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................CACGATTTTTTGGCCGTGGCTCTAG-A..............................................................................................................................26200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACGATC.................................................................................................................................................................27200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTGTTAGAGAGCGAGAGA--.................................................................................18200.50100000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GAATTTTTGTTAGAGAGCGAGAGA--G................................................................................25200.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTGCG----CTTTAGGTTCGGCCGA..................................................................................................................................................................................................................................................................................21140.5070000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTTAGGTTCGGCCGACCGGA.............................................................................................................................................................................................................................................................................20200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000030000000000000000000000000000000000100000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................C-CCTA------GAATAA-CAAGATGCGT................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004020000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000
.....................................................................................................TA------GAATAA-CAAGATGCGTAAC.............................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCCAGGCTCTCTCGAATTTTTGTT................................................................................................24200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TCGAATTTTTGTTAGAGAGCGAGAGA--G................................................................................27200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TCTCTCGAATTTTTGTTAGAGAGCGAG......................................................................................27200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCGAGAGA--GCGAAGAGCGCTACAG.................................................................24200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................TTTTTGGCCGTGGCTCTAG-AGGT...........................................................................................................................23200.4590000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GCGAAGAGCGCTACAGCGAAC............................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000100000000
............................................................................................................................................................................................................TTAGAGAGCGAGAGA--GCGAAG...........................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016000000000000000000000
...................TTCGGCCGACCGGAGCAGCTTATA...................................................................................................................................................................................................................................................................24200.4590000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000003000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GAGCGAGAGA--GCGAAGAGCGCTA....................................................................23200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000
....................TCGGCCGACCGGAGCAGCTTA.....................................................................................................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000301000000010000000000000000000000000
............CTTTAGGTTCGGCCGACCGGA.............................................................................................................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060100000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GAATTTTTGTTAGAGAGCGAGAGA--GC...............................................................................26200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ACAGCGAACAGCTCTTTTCAACGCA............................................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCTGCG----CTTTAGGTTCGGCCGACCGGA.............................................................................................................................................................................................................................................................................27140.4360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................GGCCGACCGGAGCAGCTTATAC..................................................................................................................................................................................................................................................................22190.4280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000006
.......G----CTTTAGGTTCGGCCGACCGG..............................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000100000000140000000000000000000000000
...............TAGGTTCGGCCGACCGGAGCAGCT.......................................................................................................................................................................................................................................................................24200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000101000000100000000000000000000000100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................AGGTTCGGCCGACCGGAGCAGC........................................................................................................................................................................................................................................................................22200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000001000000
........................................................................................................................................................................................................TTTGTTAGAGAGCGAGAGA--GCGAAGA..........................................................................26200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TAGGTTCGGCCGACCGGAGC...........................................................................................................................................................................................................................................................................20200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AAGAGCGCTACAGCGAACAGC.........................................................21200.4080000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000
.......................................................................................................................................................................................................................................................................TGATAGCAGACAACTGTA.....................18200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TGGCCGTGGCTCTAG-AGGTGG.........................................................................................................................21200.4080000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000
...CTGCG----CTTTAGGTTCGGCCGAC.................................................................................................................................................................................................................................................................................22140.3650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTATATG------------------------------------------AGACCTTTATATTTG--A--AT-AGTTA----------TACCAAAGAC-ACTA------GAATAA-TAAGATGCGTAACGCC-ATACGATTTTTTTGCACACGATTTTTTCGGGCTGGCTCTAG-AGCTGGCTCCAGGCTCTCTCGAATTTTTGTTCAAGAGCCAGAGAAAG-AGAGCGCTCTAGAGCCAG----------------------TGATGC-------------------------------CASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................GCTCCAGGCTCTCTCGAATTTTTGTT................................................................................................26200.1530000003
......................................................................................................................................TACGATTTTTTTGCACACGATTTT................................................................................................................................................24200.1022000000
.....................................................................................................................AAGATGCGTAACGCC-ATACGA...................................................................................................................................................................21200.1020000002
................................................................................................................TAA-TAAGATGCGTAACGCC-AT.......................................................................................................................................................................21200.1020000110
.....................................................................................................................................................................TGGCTCTAG-AGCTGGCTCCAGGC.................................................................................................................23200.1022000000
..........................................................................................................................................................TTTTTTCGGGCTGGCTCTAG-AGGC...........................................................................................................................24200.1020000002
......................................................................................................................................................ACGATTTTTTCGGGCTGGCTCT..................................................................................................................................22200.0511000000
...............................................................................................................................................TTTGCACACGATTTTTTCGGGCTGGC.....................................................................................................................................26200.0511000000
......................................................................................................................................................................GGCTCTAG-AGCTGGCTCCAGGCTCTC.............................................................................................................26200.0510100000
droYak3
AGCGCGGTCGA-----------------TTTGC----TCAT--GTAAA--AAGCATACAGATCTC--TTGAC-GCTTA----------AACCAAAGAC-ATTA------GAATAA-CAAGATGCGTAACGCC-ATACAATTTTTTTGCACACGATTTTTTCGTG-------------CAGACTCCAGGCTCTCTCCAAATTTTGTTCAATAGCCAGAGG--GCGGAGAGCTTTAGAGCCAGCAGCT---------------------------------TATGTCCGCACTTCGTG-CTTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................AATAGCCAGAGG--GCGGAGAGC........................................................................2111.00100000010000
.........................................................................................................................................................................................................................................AGAGCCAGCAGCT---------------------------------TATGTCCGCACT...........2511.00101000000000
.........................................................................................................................................AATTTTTTTGCACACGATTTTTT..............................................................................................................................................2320.50101000000000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACAATT.................................................................................................................................................................2720.50100000010000
................................................................................................................TAA-CAAGATGCGTAACGCC-ATACAAT..................................................................................................................................................................2620.50100000010000
.....................................................................................................TA------GAATAA-CAAGATGCGTAACGCT-.........................................................................................................................................................................24200.10202000000000
.....................................................................................................TA------GAATAA-CAAGATGCGTAACGC...........................................................................................................................................................................23200.05100100000000
....................................................................................................................................................................................................................................................CT---------------------------------TATGTCCGCACTTCGTG-CTT..22200.05101000000000
...........................................................................................................................................TTTTTTTGCACACGATTTTTTC.............................................................................................................................................22200.05101000000000
.............................................................................................................GAATAA-CAAGATGCGTAACGCC-A........................................................................................................................................................................23200.05100000010000
droEug1
CTACTGGTGGCGGTCACGAC---------TGGA-------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AACGTACT---------------------------------------------------TTCTGGCAACTAT-AGTGT----------AACCAAAGAC-ATAA------GAATAT-GAAGATAAATAGCGCC-ATAAGATTTTTTTGCACACGATTTTTTGGTGCTGGCTTTAG-AGCTGGCTCCAGGCTCTCT--------TGCTCAAAAGCCAGAGA--G-AGAGCGCTCTAGAGCCAGCCGCTCTCATGCACG-------CGACAGAACACGATTGGATGTGTGCACA-TGTGTTCTTGSizeHit CountTotal NormTotal
No Reads
droTak1
TAGAAAGCGCAGCTTGCAGT---------------------------------------------------T-GGTCA----------GTGCAAAGAC-ATTA------GAATAT-GAAGATGGATAACGCC-ATACGATTTTTTTGCACACAATTTTTTGGTGCTGGCCCTAG-AGCTGGCTCCAGGCTCTCT--------TGCTCAAAAGCCAGAGA--G-AGAGCGCTCTAGAGCCAGCCGCTCTCATTCACGCATACAGAGACAGAAGACGATTGTATGTGTGCACA-TGTATTCTCGSizeHit CountTotal NormTotal
No Reads
droEle1
TCCTTTCTTGAAG--------------------------------------CACCTACGTATTTG--AACAT-GATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCAATTCTGGTCGCTTCTGG----TCGATCGC--CAGCTTCAAGCGGTCCAGTTGTTCGCAGTCG-----AT-CGTAG----------AATCAAAGACCAATA------TAATCTCTAAGATGCGTAACGCC-TTACGATTTTTTTGCACACGAATTTTTTATGCTGGCTTTTC-AACTGGCTTTTCGCTCTCT--------TGCCCAAAAGCCAGCGA--G-AGAGCGCTCTAGAACCAGCCGCTCTCTTGCACGCATACTGCGACATCCGGCGACTGTATGTGTGCACA-TGTATTCACASizeHit CountTotal NormTotal
No Reads
droFic1
CTGCTGGTGGCGGTCACAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCCTAA-----------------------------------------A--ATAGGTGCCCA------AA-ATGGGTAG----------AGCCAAAGAC-AATA------GAGTTA-TAAGATAGGTAACGCC-ATACGATTTTTTTGCACACGATTTTTTCGTGCTGGCTTTTG-AACTGGCTCCAGGCTCTCTTAAA-TGTTGTTCAAAAGCCAGCGA--AGAGAGCGCTCTAGAGCCAGCCGTTCTCTTGTACGCATTCAGCGAC-GCCGCCGGGTGTTTGTGTGCAAA-CGGG-CCTCASizeHit CountTotal NormTotal
No Reads
droAna3
CTGCTGGTGGCAGTCACAACTGGGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CAACAACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAACAAATAGCTCTATGTGTGCGTC-CGTGTTCT--SizeHit CountTotal NormTotal
No Reads
dp5
GG-------------------------------------------------------------------------TAG----------AAGCAAAAAC-AATATAAATACAATAG-GAAGATGAGTAACGCCCACACATTTCAATGATACATGACTTTAGCGGCTTGGCTTTTGAAAGTGGCTCCAGGCTCTCTTCAAATTTTGTTGAAGAGCGGCAG-------------------CGGACGACTCAGATT---------------------TGAATGCAGGCGTGGACA-CGTAATCTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................ATT---------------------TGAATGCAGGCGTGGACA-..........2111.0010000000010
droPer2
AAAATAATGAAAT---------------------------------------------------------------------------AAGCGAAGAT-AATAT-----GAGTAAGTAAGATGAGTAACGCC-ATACAAATTTTTTGTACTTGAATTTTCT-GACCGGCTCAAG-AGCTGACTCCAGGCTCTCTTGAAATTTTGTTCAAGAGCCAGCCAGAGCG----GCTATACAT---GAGGCTGAGATGCTCG-------CAATGCCAAAAAATTGTATTAGTTCATT-AGTTT-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTGT------------------------------------------------------------------------------------------------------------------------------------------------------------CGACATTGCTATAG-CGTTTGCCCGAAGCTTACTCAAGGTTTTGTTC-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................TAG-CGTTTGCCCGAAGCTTACTCAAGG.......................................................................................................2715.00503110
...........................................................................................................................................................................TAG-CGTTTGCCCGAAGCTTACTCAAG........................................................................................................2614.00402020
......................................................................................................................................................................TGCTATAG-CGTTTGCCCGAAGCTTA..............................................................................................................2512.00201010
.TGT------------------------------------------------------------------------------------------------------------------------------------------------------------CGACATTGCTATAG-CGTTTGCCCGA....................................................................................................................2812.00201010
.TGT------------------------------------------------------------------------------------------------------------------------------------------------------------CGACATTGCTATAG-CGTTTGCCC......................................................................................................................2612.00202000
......................................................................................................................................................................TGCTATAG-CGTTTGCCCGAAGCTTAC.............................................................................................................2612.00202000
.................................................................................................................................................................................TTTGCCCGAAGCTTACTCAAGGTTT....................................................................................................2511.00101000
...........................................................................................................................................................................TAG-CGTTTGCCCGAAGCTTACTCAAT........................................................................................................2611.00100010
........................................................................................................................................................................CTATAG-CGTTTGCCCGAAGCTTACTC...........................................................................................................2611.00101000
......................................................................................................................................................................TGCTATAG-CGTTTGCCCGAAGCTTACTC...........................................................................................................2811.00101000
.TGT------------------------------------------------------------------------------------------------------------------------------------------------------------CGACATTGCTATAG-CGTTTGCCCG.....................................................................................................................2711.00101000
..GT------------------------------------------------------------------------------------------------------------------------------------------------------------CGACATTGCTATAG-CGTTTGCC.......................................................................................................................2411.00101000
...........................................................................................................................................................................TAG-CGTTTGCCCGAAGCTTACTCAA.........................................................................................................2511.00101000
.........................................................................................................................................................................TATAG-CGTTTGCCCGAAGCTTACTCAAG........................................................................................................2811.00100010
......................................................................................................................................................................TGCTATAG-CGTTTGCCCGAAGCTTACT............................................................................................................2711.00101000
.......................................................................................................................................................................GCTATAG-CGTTTGCCCGAAGCTTACT............................................................................................................2611.00101000
.........................................................................................................................................................................TATAG-CGTTTGCCCGAAGCTTACTCAAGG.......................................................................................................2911.00101000
...................................................................................................................................................................................TGCCCGAAGCTTACTCAAGGTTTTGT.................................................................................................2640.50202000
...................................................................................................................................................................................TGCCCGAAGCTTACTCAAGGTTTTG..................................................................................................2540.50202000
...................................................................................................................................................................................TGCCCGAAGCTTACTCAAGGTTTTGTTC-----------------------------------------------------------------------------------------------2840.25101000
.........................................................................................................................................................................................AAGCTTACTCAAGGTTTTGTT................................................................................................2140.25100010
droVir3
CAACTGGGTG--GATTCAGT--TGGGAACTGGG------------------------CCGGTGTT--TTACC-ATTGAAATATGGCAAAGACAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............ATTCAGT--TGGGAACT................................................................................................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000000000000000000100000
droMoj3
CTGCTGGTGGCAGTCACG---TAAGGAGCTGGA-------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTACTGGTGGCAGTCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:48 AM