ID:

dsi_27246

 Coordinate:

2l:18926853-18927040 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.6 -28.6 -28.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TCTCAACTACGCGTCCTTGGTGCAGAAAACTCCAATAGCCAGCTGGCAGTGTAAGTAGATAAATGTTTAAATAGGGATTTAGGGATAGTACCTACTTATTTTTAGTTGTAAATGTCTTTTATAGATAGAAAAAGTATCTAAAAGTATCAGATAGAGATTTATGAGCTATTTCCGATATTTGTGGTTACTATATTAATTACTATATTCATGTTTGATTAATGAGTTCGTTTTCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGCTGTGTCACCTGATGGCCAAGACC
**************************************************((((((((.((.((.(((((((....))))))).))..)).))))))))(((((.(((((((.....))))))).)))))..((((.(((.(((((((((((((...........))))))..))))))).))).)))).(((((((((..(((....))).))))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................................................................................................................................CTGCTGTGTCACCTGATGGCC...... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................AAAACTCCAATTGCCAGCTGGC................................................................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATTAATGAGTTCGTTTTCCTTCAG.................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
TCTCAACTACGCGTCCTTGGTGCAGA...................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................AGAAAACTCCAATAGCCAGCTGGCA................................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
TCTCGACTACGCGTCCTTGGT........................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GCTGTGTCACCTGATGGCCAAGA.. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................GAAAACTCCAATAGCCAGCTGGCA................................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................CTGGCAGTGTAAGGAGACAATT................................................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................TTTCTGATAGTTGTGGTTA..................................................................................................... 19 2 4 0.50 2 0 0 0 0 0 0 2 0 0 0
............................................GGCAGTGTAAGGAGATA................................................................................................................................................................................................................................... 17 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..........................................CTGGCAGTGTAAGTAGAC.................................................................................................................................................................................................................................... 18 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.............................................GCAGTGTAAGGAGATA................................................................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.........................................................GATACATGTTTATATAGGGG................................................................................................................................................................................................................... 20 3 14 0.21 3 0 0 0 0 3 0 0 0 0 0
..........................................CTGGCACTGTAAGGAGAT.................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.........................................GCTGGCAGTGTAAGGA....................................................................................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
........................................................GGATACATGTTTATATAGGG.................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0
..............................TGCAATAGCCAGCTGCGAGT.............................................................................................................................................................................................................................................. 20 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................TATAGATAGAAAAACT......................................................................................................................................................... 16 1 13 0.08 1 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................................................CTACGGGTGGCTGCAGT.................... 17 2 14 0.07 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................AGATGTAAATTTCTTTTAT...................................................................................................................................................................... 19 2 17 0.06 1 0 0 0 1 0 0 0 0 0 0
......CTAAGCGTCCATGGTGTA........................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

AGAGTTGATGCGCAGGAACCACGTCTTTTGAGGTTATCGGTCGACCGTCACATTCATCTATTTACAAATTTATCCCTAAATCCCTATCATGGATGAATAAAAATCAACATTTACAGAAAATATCTATCTTTTTCATAGATTTTCATAGTCTATCTCTAAATACTCGATAAAGGCTATAAACACCAATGATATAATTAATGATATAAGTACAAACTAATTACTCAAGCAAAAGGAAGTCAGAGGGAATCCACGATGCTCACCGACGACACAGTGGACTACCGGTTCTGG
**************************************************((((((((.((.((.(((((((....))))))).))..)).))))))))(((((.(((((((.....))))))).)))))..((((.(((.(((((((((((((...........))))))..))))))).))).)))).(((((((((..(((....))).))))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M053
female body
 GSM343915
embryo
...................................................................................................................................................................................................................................AAAAGGAAGTCAGAG.............................................. 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AGGTACTCAGGGGGAATCC....................................... 19 3 6 1.00 6 5 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................ACAAGGAAGTCAGAGGGAA.......................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................GCATGGTCTATCACTAAAT............................................................................................................................... 19 3 11 0.36 4 0 0 0 0 3 0 0 1 0 0
...................................................................................................................................................................................................................................AAAACGAAGTCAGAGCGAAT......................................... 20 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................GATTGTCATAGTCTA........................................................................................................................................ 15 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AAAACGAAGTCAGAGCGAA.......................................... 19 2 9 0.22 2 0 0 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................................................AAAACGAAGTCAGAGCGAATT........................................ 21 3 9 0.22 2 0 0 0 2 0 0 0 0 0 0
.........................................AGACCGTCACATTCCTGTATT.................................................................................................................................................................................................................................. 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GGTACTCAGGGGGAATCC....................................... 18 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TGGCTATAAACACCA....................................................................................................... 15 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................GGATTGTCATAGTCTA........................................................................................................................................ 16 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAAACGAAGTCAGAGCGAAT......................................... 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAGAAAAAGGAAGTCA................................................. 16 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CCCGATAAAGGCTATAT............................................................................................................. 17 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ACTCAGGGGGAATCC....................................... 15 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................TCGAGCAAAAGGAAG.................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATATCTTTTTCCTAGATT................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GGTACTCGGAGGGAATCC....................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...............................GGTTATCGATCGACCGTAG.............................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................AGAGGAAATCCACGAAG................................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................AGATATCTCTGTTTTTCATA....................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:18926803-18927090 - dsi_27246 TCTCAACTACGCGTCCTTGGTGCAGAAAACTCCAATAGCCAGCTGGCAGTGTAAGTAGA-------TAAATGTTTAAATAGGGATTTAGGGATAGTACCTACTTATTTTTAGTTGT-AAATGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------TTT----ATAGATAGAAAAAGTATCTAAAAGTA----TCAGATA-------------------GAGA---TTTATGAGCTATTTCCGATATT-----TGTGGTT----------------------------------ACTATATTAATTACTATATTCATGTTT----------------------------------------------------GA---TTAATG-AGT--TCGTTTTCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGCTGTGTCACCTGATGGCCAAGACC
droSec2 scaffold_7:3007661-3007951 - TCTCAACTACGCGTCCTTGGTGCAGAAAACTCCAATAACCAGCTGGCAGTGTAAGTAGA-------TAAGTGTTTAAATGCAGCTTAAGGGATAGTACCTACTTGTTTCTAGTTGT-AAATGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTT----AAAGATAGAAAAAGTATCTAAA--CAGTTTTTAGAAATAATTTTGCTTAGAAGAAAC---------------------CGAAATT-----TGTTATT----------------------------------ACTATATTAATTACTATATTCATGTTC----------------------------------------------------GA---TTAAAT-AGT--TCGTTTCCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGTTGTGTCACCTCATGGCCAAGACC
dm3 chr2L:19391170-19391487 - TCTCAACTACGCGTCCTTGGCGCAGAAAACTCCAATAGCCAGCTGGCAGTGTAAGTAGA-------TAAGAGCCT--------------------------------CCTAGTCAT-AAATGTTTCAAAAAAGATAGATGTC---------------------------C---------------------------------------------------------------------TTCAAA-----TTT-----CAACAACTATTGAGTTTAGAACTT----AAAGATAGAAAAAGTATCTTAG--TAGTTTTTAGAGA-------------------GACG---TTCATGAGCTATTTTCTAAATT-----GGTGGTTAAATTGAGATAAAATATTATTAAGGT--------ACTATGAT--------------TGTTT----------------------------------------------------GA---TTAAAG-AGT--TCGTTTTCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGCTGTGTCACCTGATGGCCAAGACC
droEre2 scaffold_4845:4903037-4903377 + TCTCAACTATGCGTCCTTGGTGCAGAGAACTCCCGTAACCAGCTGGCAGTGTAAGTAGA-------TGACTTTCC--------------------------------CGGACTCAT-AAATGCTCAAAAAATGCTAGATATCTGTGCGTTAGGCAGCTTTAGTTTCATTC---------------------------------------------------------------------ATCAAGGGGGTTTT-----TACAAATCACTGAGCTCAGAATCT----GAAGACAGAACAAGTATCTAAG--TAGTTTTTAAAAATAATTGTGATTCGAAGAAATAGT---ATTATTAGCTATTACC------TTATTTGTGG---------------------------T--------GCTATGAT--------------TGTTT----------------------------------------------------GA---CTAAAG-AGC--TCGTCTTCCTGCAGTCTCCCTAAGGTGCTACGAGTGGCTGCTGTGCCACCTGATGGCCAAAACC
droYak3 2R:5889528-5889734 - TCTCAACTATGCGTCCTTGGTGCAGAGAACTCCCATAACCAGCTGGCAGTGTAAGTAGA-------TTAGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATGAGCTATTACC------TTAGATGTGGT-AAACTCAAGTAAGGCAATGTTAAGGT--------ACAACGAT--------------TGTTG----------------------------------------------------GA---CTAAAA-AGT--TCGTTTTCCCTTAGTCTCCCTGAAGTGCTATGAGTGGCTGCTGTGTCACCTGATGGCCAAAACC
droEug1 scf7180000409463:1707660-1707737 - TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---ATAATGAGTT--CTTTTCCCTTTCAGTTTCCCTCAGGTGCTACGAGTGGCTGTTGTGCCATTTGATGGCTCAAACC
droBia1 scf7180000302422:4245534-4245601 + CCTCAACTATGCCTCCTTGGTGCAGAAGACACCGATAACCAGCTGGCAATGTAAGTCGA-------TAAGTTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000410539:17707-17797 + TAGTAAATTTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----------------------------------------------------AT---TTGTTT-AAT--TCGTTTCCTTTTAGTCTCCCTCCGGTGCTACGAGTGGCTGTTGTGCCACCTAATGGCCCAAACC
droEle1 scf7180000491046:3586726-3587045 + CCTCAACTACGCCTCTTTGGTGCAGAAGACTCCTATGTCCAGCTGGCAATGTGAGTGCT-------TTAGTTACG--------------------------------CAATCGGATATAA-----------AATGAGAAGTC---------------------------C---------------------------------------------------------------------TTCTAC-----TTTTTTTTGAGTAACCACTTTATTTAGGGTGTTATAAAATGTAGAAA----------------------------ATTTTCATTCCACAAA-----ATA----------------------GTAAT-------------------------------ATTTTTTGTTTTTAGGT-------------CATATTTG-TAGAATTTTTAATTTATAGAATTTATATAGAATTTATATAGAATTTATATAA---CTAAAT-AAT--TTGTTTCCTTGCAGTTTCTCTTAGGTGCTACGAGTGGCTCCTCTGCCACCTGATGGCCCAGACC
droRho1 scf7180000779178:1490-1596 - TTTATAGT-TGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT-----------------------------------TTTTATTGAATTTATTTGA---CTAAAG-AAA--TATTTTCCTTGCAGTTTCCTTGAGGTGCTACGAGTGGCTGCTTTGCCATTTGATGGCCCGAACC
droFic1 scf7180000454003:220883-221260 + CCTCAATTACGCATCCTTGGTGCAGAAGACTCCTCTTTCCAGTTGGCAATGTGAGTGAA-------TAAGGTTTT--------------------------------CAAACTCAT-TAA-----------AAAGAACATTC---------------------------AATTGTAGAAAAAGCAAAGAGGTTATGGACAAGATTTAGAAAGCGTAAACGTTTTGCTGAAATGAAAATATTACAT-----TTTTGTTTGAGA--C-----------------------------------------------------------------TATTCCAAAAA-----ATT----------------------TTAAAAATGCT-CAATTTAAATGAAATATTGATATAATATTTTGTTTTAATGAT--------------TATTAGATAGAT-TA-TTATTAATAT--TATGGCTAAACATTTTCTAGAATTTATTTGA---CTGATCACTTATATTTTTTATTGCAGTTTCCCTTCGGTGCTACGAGTGGCTGCTCTGCCATTTGATGGCCAAAACT
droKik1 scf7180000302684:1011325-1011407 - TCAAACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---TTAATG-CCT--CAATTTATTTGCAGTTTCTCTCCGTTGCTACGAGTGGCTGCTGTGCCATCTGATGGCTCACACC
droAna3 scaffold_12916:5032189-5032269 + AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGAGAACTA----ATA--ACCGTTTCTTGTAGTCTCCCTCAGGTGCTACGAGTGGCTTCTCTGCCATCTGATGGCCCACACC
droBip1 scf7180000396366:131223-131287 + TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTCTTTCAGTCTCCCTCAGGTGCTACGAGTGGCTTCTCTGCCACCTGATGGCCCACACC
dp5 4_group4:6097773-6097837 + TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTCCTTGCAGTCTCGCTCAGGTGCTATGAGTGGCTGCTGTGCCACCTGATGGCCCACACC
droPer2 scaffold_16:795219-795283 - TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTCCTTGCAGTCTCGCTCAGGTGCTATGAGTGGCTGCTGTGCCACCTGATGGCCCACACC
droWil2 scf2_1100000004516:54514-54649 + GCTGAAATATGATCAACTGGTGCAGCAGACTCCCATAAAGACATGGCAATGTGAGTGCAAGTGTGATAAGGTTTC--------------------------------GAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATAAATA-------------------T----------------------------------------------------AA---TTAACA-CTT--TTTTCGTATTTTAGTTGCCATCACTTGTTATGAGTGG---------------------------
droVir3 scaffold_12723:3321228-3321292 - TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTTTGCAGTTGCGCTCACCTGCTACGAGTGGCTGCTGTGCCACCTAATGTCCCGTACG
droMoj3 scaffold_6500:6472514-6472574 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGCAGTTGCGCTCAGCTGCTACGAGTGGCTGCTGTGCCACCTGATGGCGCACACG
droGri2 scaffold_15126:148505-148586 + AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGA---CTAATCGCCG--TTATTTTCTTGCAGTTGCGCTCAGCTGCTACGAATGGCTGCTCTGCCATCTGATGTCCCGCACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTCAACTACGCGTCCTTGGTGCAGAAAACTCCAATAGCCAGCTGGCAGTGTAAGTAGA-------TAAATGTTTAAATAGGGATTTAGGGATAGTACCTACTTATTTTTAGTTGT-AAATGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------TTT----ATAGATAGAAAAAGTATCTAAAAGTA----TCAGATA-------------------GAGA---TTTATGAGCTATTTCCGATATT-----TGTGGTT----------------------------------ACTATATTAATTACTATATTCATGTTT----------------------------------------------------GA---TTAATG-AGT--TCGTTTTCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGCTGTGTCACCTGATGGCCAAGACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGTGTCACCTGATGGCC......2111.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TTAATG-AGT--TCGTTTTCCTTCAG..................................................2411.00110000000000000000
TCTCAACTACGCGTCCTTGGTGCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.......................AGAAAACTCCAATAGCCAGCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTCACCTGATGGCCAAGA..2311.00100010000000000000
........................GAAAACTCCAATAGCCAGCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..........................................CTGGCAGTGTAAGTAGA-------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.33110000000000000000
droSec2
TCTCAACTACGCGTCCTTGGTGCAGAAAACTCCAATAACCAGCTGGCAGTGTAAGTAGA-------TAAGTGTTTAAATGCAGCTTAAGGGATAGTACCTACTTGTTTCTAGTTGT-AAATGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTT----AAAGATAGAAAAAGTATCTAAA--CAGTTTTTAGAAATAATTTTGCTTAGAAGAAAC---------------------CGAAATT-----TGTTATT----------------------------------ACTATATTAATTACTATATTCATGTTC----------------------------------------------------GA---TTAAAT-AGT--TCGTTTCCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGTTGTGTCACCTCATGGCCAAGACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGTGGCTGTTGTGT..................1912.0022000
...CAACTACGCGTCCTTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
...CAACTACGCGTCCTTGGTGCAGAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
dm3
TCTCAACTACGCGTCCTTGGCGCAGAAAACTCCAATAGCCAGCTGGCAGTGTAAGTAGA-------TAAGAGCCT--------------------------------CCTAGTCAT-AAATGTTTCAAAAAAGATAGATGTC---------------------------C---------------------------------------------------------------------TTCAAA-----TTT-----CAACAACTATTGAGTTTAGAACTT----AAAGATAGAAAAAGTATCTTAG--TAGTTTTTAGAGA-------------------GACG---TTCATGAGCTATTTTCTAAATT-----GGTGGTTAAATTGAGATAAAATATTATTAAGGT--------ACTATGAT--------------TGTTT----------------------------------------------------GA---TTAAAG-AGT--TCGTTTTCCTTCAGTCTCCCTTAGGTGCTACGAGTGGCTGCTGTGTCACCTGATGGCCAAGACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................CAACTATTGAGTTTAGAACTT----A..................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTGCTACGAGTGGCTGC.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...........CGTCCTTGGCGCAGAAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTAGGTGCTACGAGTGGCT.........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGGTGCTACGAGTGGCT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................TGGCAGTGTAAGTAGA-------TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................CAGAAAACTCCAATAGCCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTCCTTGGCGCAGAAAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........CGTCCTTGGCGCAGAAAACTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTGTGTCACCTGATGGC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGGCAGTGTAAGTAGA-------TAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTCACCTGATGGCC......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-AGT--TCGTTTTCCTTCAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTGTGTCACCTGATGGCCA.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGGCAGTGTAAGTAGA-------TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGTGGCTGCTGTGTC.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCAACTACGCGTCCTTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.CTCAACTACGCGTCCTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........CGTCCTTGGCGCAGAAAACTCCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GCAGTGTAAGTAGA-------TAAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GGCAGTGTAAGTAGA-------TAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTGTCACCTGATGG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGTCACCTGATGGC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGGCAGTGTAAGTAGA-------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATGTTTCAAAAAAGATAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTGTCACCTGATGGCCA.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTGTCACCTGATGGC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTAGGTGCTACGAGTGGCTGC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTTAGGTGCTACGAGT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGGTGCTACGAGTGGCTGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTCACCTGATGGCCAA....2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AAAGATAGATGTC---------------------------C---------------------------------------------------------------------TTCAAA-----TTT-----C..............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGCTGGCAGTGTAAGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AT--------------TGTTT----------------------------------------------------GA---TTAAAG-AGT--TCGTTTTC........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......TACGCGTCCTTGGCGCAGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAT--------------TGTTT----------------------------------------------------GA---TTAAA.......................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATAGCCAGCTGGCAGTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGGCAGTGTAAGTAGA-------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000
droEre2
TCTCAACTATGCGTCCTTGGTGCAGAGAACTCCCGTAACCAGCTGGCAGTGTAAGTAGA-------TGACTTTCC--------------------------------CGGACTCAT-AAATGCTCAAAAAATGCTAGATATCTGTGCGTTAGGCAGCTTTAGTTTCATTC---------------------------------------------------------------------ATCAAGGGGGTTTT-----TACAAATCACTGAGCTCAGAATCT----GAAGACAGAACAAGTATCTAAG--TAGTTTTTAAAAATAATTGTGATTCGAAGAAATAGT---ATTATTAGCTATTACC------TTATTTGTGG---------------------------T--------GCTATGAT--------------TGTTT----------------------------------------------------GA---CTAAAG-AGC--TCGTCTTCCTGCAGTCTCCCTAAGGTGCTACGAGTGGCTGCTGTGCCACCTGATGGCCAAAACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............GTCCTTGGTGCAGAGAACTCCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTGTGCCACCTGATGGC.......2212.0022000000
...CAACTATGCGTCCTTGGTGCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTAAGGTGCTACGAGTGG...........................2211.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCTACGAGTGGCTG........................1811.0010000010
.CTCAACTATGCGTCCTTGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
............GTCCTTGGTGCAGAGAACTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
........ATGCGTCCTTGGTGCAGAGAACTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
droYak3
TCTCAACTATGCGTCCTTGGTGCAGAGAACTCCCATAACCAGCTGGCAGTGTAAGTAGA-------TTAGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATGAGCTATTACC------TTAGATGTGGT-AAACTCAAGTAAGGCAATGTTAAGGT--------ACAACGAT--------------TGTTG----------------------------------------------------GA---CTAAAA-AGT--TCGTTTTCCCTTAGTCTCCCTGAAGTGCTATGAGTGGCTGCTGTGTCACCTGATGGCCAAAACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTGAAGTGCTATGAGT.............................20112.0012020000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGTGCTATGAGTGGC..........................2114.00400000040000
.CTCAACTATGCGTCCTTGGTGCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000030000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTGTGTCACCTGAT..........1913.00303000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTATGAGTGGCTGCTGTGTC.................2313.00300000030000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAGTGGCTGCTGTGTC.................2012.00201000010000
.CTCAACTATGCGTCCTTGGTGCAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000
.CTCAACTATGCGTCCTTGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201000010000
........ATGCGTCCTTGGTGCAGAGAACTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000
....................TGCAGAGAACTCCCATAACCAGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00220000000000
.............................CTCCCATAACCAGCTGGCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTGAAGTGCTATGAGTGGC..........................2312.00200000020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTATGAGTGGCTGCTGT....................2012.00201000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGAAGTGCTATGAGTGGCTGC.......................2712.00200000020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTGTCACCTGATGGC.......2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTGAAGTGCTATGAGTGGCTGC.......................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGTGCTATGAGTG............................1911.00100000010000
..........GCGTCCTTGGTGCAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTGAAGTGCTATGAGTGGCTGCT......................2711.00100000010000
.CTCAACTATGCGTCCTTGGTGCAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGTGCTATGAGTGGCTGCT......................2511.00100000010000
.......TATGCGTCCTTGGTGCAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTATGAGTGGCTGCTGTGT..................2211.00100000010000
.......................AGAGAACTCCCATAACCAGCTGGCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGAAGTGCTATGAGTG............................2211.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGAAGTGCTATGAG..............................2011.00100000010000
...........................AACTCCCATAACCAGCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGAAGTGCTATGAGC.............................2111.00101000000000
.CTCAACTATGCGTCCTTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGAAGTGCTATGAGTGGCTGCTG.....................2911.00100000010000
..............................TCCCATAACCAGCTGGCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTGAAGTGCTATGAGTG............................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTGGCTGCTGTGTC.................1811.00101000000000
...................GTGCAGAGAACTCCCATAACCAGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCACCTGATGGCCAAAACC2211.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGAAGTGCTATGAGTGGCTGCTGT....................2811.00100000010000
....AACTATGCGTCCTTGGTGCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...CAACTATGCGTCCTTGGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................CCCATAACCAGCTGGCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGCTATGAGTGGCTGCTGT....................2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGAAGTGCTATGAGTGGC..........................2411.00100000010000
......CTATGCGTCCTTGGTGCAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...CAACTATGCGTCCTTGGTGCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................CAGAGAACTCCCATAACCAGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........ATGCGTCCTTGGTGCAGAGAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---ATAATGAGTT--CTTTTCCCTTTCAGTTTCCCTCAGGTGCTACGAGTGGCTGTTGTGCCATTTGATGGCTCAAACCSizeHit CountTotal NormTotal
No Reads
droBia1
CCTCAACTATGCCTCCTTGGTGCAGAAGACACCGATAACCAGCTGGCAATGTAAGTCGA-------TAAGTTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAGTAAATTTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----------------------------------------------------AT---TTGTTT-AAT--TCGTTTCCTTTTAGTCTCCCTCCGGTGCTACGAGTGGCTGTTGTGCCACCTAATGGCCCAAACCSizeHit CountTotal NormTotal
No Reads
droEle1
CCTCAACTACGCCTCTTTGGTGCAGAAGACTCCTATGTCCAGCTGGCAATGTGAGTGCT-------TTAGTTACG--------------------------------CAATCGGATATAA-----------AATGAGAAGTC---------------------------C---------------------------------------------------------------------TTCTAC-----TTTTTTTTGAGTAACCACTTTATTTAGGGTGTTATAAAATGTAGAAA----------------------------ATTTTCATTCCACAAA-----ATA----------------------GTAAT-------------------------------ATTTTTTGTTTTTAGGT-------------CATATTTG-TAGAATTTTTAATTTATAGAATTTATATAGAATTTATATAGAATTTATATAA---CTAAAT-AAT--TTGTTTCCTTGCAGTTTCTCTTAGGTGCTACGAGTGGCTCCTCTGCCACCTGATGGCCCAGACCSizeHit CountTotal NormTotal
No Reads
droRho1
TTTATAGT-TGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT-----------------------------------TTTTATTGAATTTATTTGA---CTAAAG-AAA--TATTTTCCTTGCAGTTTCCTTGAGGTGCTACGAGTGGCTGCTTTGCCATTTGATGGCCCGAACCSizeHit CountTotal NormTotal
No Reads
droFic1
CCTCAATTACGCATCCTTGGTGCAGAAGACTCCTCTTTCCAGTTGGCAATGTGAGTGAA-------TAAGGTTTT--------------------------------CAAACTCAT-TAA-----------AAAGAACATTC---------------------------AATTGTAGAAAAAGCAAAGAGGTTATGGACAAGATTTAGAAAGCGTAAACGTTTTGCTGAAATGAAAATATTACAT-----TTTTGTTTGAGA--C-----------------------------------------------------------------TATTCCAAAAA-----ATT----------------------TTAAAAATGCT-CAATTTAAATGAAATATTGATATAATATTTTGTTTTAATGAT--------------TATTAGATAGAT-TA-TTATTAATAT--TATGGCTAAACATTTTCTAGAATTTATTTGA---CTGATCACTTATATTTTTTATTGCAGTTTCCCTTCGGTGCTACGAGTGGCTGCTCTGCCATTTGATGGCCAAAACTSizeHit CountTotal NormTotal
No Reads
droKik1
TCAAACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---TTAATG-CCT--CAATTTATTTGCAGTTTCTCTCCGTTGCTACGAGTGGCTGCTGTGCCATCTGATGGCTCACACCSizeHit CountTotal NormTotal
No Reads
droAna3
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGAGAACTA----ATA--ACCGTTTCTTGTAGTCTCCCTCAGGTGCTACGAGTGGCTTCTCTGCCATCTGATGGCCCACACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA----ATA--ACCGTTTCTTGTAG..................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGAGTGGCTTCTCTGC..................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGTGGCTTCTCTGC..................1911.001010000
droBip1
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTCTTTCAGTCTCCCTCAGGTGCTACGAGTGGCTTCTCTGCCACCTGATGGCCCACACCSizeHit CountTotal NormTotal
No Reads
dp5
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTCCTTGCAGTCTCGCTCAGGTGCTATGAGTGGCTGCTGTGCCACCTGATGGCCCACACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGGTGCTATGAGTGGCTG........................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTATGAGTGGCTGCTGTGC..................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAGTGGCTGCTGTG...................1811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCAGGTGCTATGAGTGG...........................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTGTGCCACCTGAT..........1911.0010100000000
droPer2
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTCCTTGCAGTCTCGCTCAGGTGCTATGAGTGGCTGCTGTGCCACCTGATGGCCCACACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAGTGGCTGCTGTG...................1811.001010000
droWil2
GCTGAAATATGATCAACTGGTGCAGCAGACTCCCATAAAGACATGGCAATGTGAGTGCAAGTGTGATAAGGTTTC--------------------------------GAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATAAATA-------------------T----------------------------------------------------AA---TTAACA-CTT--TTTTCGTATTTTAGTTGCCATCACTTGTTATGAGTGG---------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...GAAATATGATCAACTGGTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.......................AGCAGACTCCCATAAAGACATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
droVir3
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTTTGCAGTTGCGCTCACCTGCTACGAGTGGCTGCTGTGCCACCTAATGTCCCGTACGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGCAGTTGCGCTCAGCTGCTACGAGTGGCTGCTGTGCCACCTGATGGCGCACACGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGTGGCTGCTGTGC..................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCAGCTGCTACGAGTGGCTGCT......................2511.001000001
droGri2
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGA---CTAATCGCCG--TTATTTTCTTGCAGTTGCGCTCAGCTGCTACGAATGGCTGCTCTGCCATCTGATGTCCCGCACCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:46 AM