ID:

dsi_27192

 Coordinate:

2r:3685895-3686044 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.9 -20.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCGGCAGCCCGCAAAGAGGTAAAACACCCAGTGAGCAGGCGGTACAGAGCAGGCCACAGGACCAGCATTTTCCACAGACACAACAGCAGGATATTGACGGCAGTAGCCCACCAGTAGAACTTGCAAGGCGCCAGCTGCCCCCCAAGCCCACCAGCTTGAGTATTTTTAACGGCCCCGTGCCCACTGCGGGCGATAGGCCTGTCGTGCCGAGAAAGTCG
**************************************************************....(((((...(((......(((.......((..((...(((...............)))...))..)).....))).....)))...)))))********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.....................................................................................................................................AGTAGCCCACCAGTAGAACTTGC.............................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................AGAGGTAAAACACCCAGTGA........................................................................................................................................................................................ 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..............................................................GTGAGCAGGCGGTACAGAG......................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCGATAGGCCTGTCGTGCCG......... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GCCCACTGCGGGCGATAGGCCTGTCGT............. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................TTTAACGGCCCCGTGCCCACTGCGG............................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................TACAGAGCAGGCCACAGGACCAGCA....................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................TTGCAGCTCCTCGGACGCG....................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................CAGTAGAACTTGCAAGGCGCC...................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CCAGTAGAACTTGCAAGGC......................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................CACCAGTAGAACTTGCAAG........................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................AGGTCACCAGTAGAACT................................................................................................. 17 2 2 0.50 1 0 0 1 0 0 0 0 0 0
..........................................GCAAAGAGGTAAAAC................................................................................................................................................................................................. 15 0 9 0.22 2 0 0 2 0 0 0 0 0 0
...CAGCGAGCAGCAGTTGCA..................................................................................................................................................................................................................................... 18 1 5 0.20 1 0 0 0 0 0 1 0 0 0
..........................................................ACCAGTGATCCGGCGGTAC............................................................................................................................................................................. 19 3 6 0.17 1 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................AGCCCACCGGGTTGAGTA........................................................ 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................GTCGATAGGCCTGACGT............. 17 2 9 0.11 1 0 0 0 0 0 0 1 0 0
......................................................................................................TTCACAGACACAGCGGCAGGA............................................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 1 0
...........................................................................ACAGAGCAGGCCAAAGGA............................................................................................................................................................. 18 1 10 0.10 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................CGATAGGCCTGACGTGT........... 17 2 11 0.09 1 0 0 0 0 0 1 0 0 0
...................CAGCTGCTCGGACGCTGC..................................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 1 0 0 0 0 0
...........................................................................ACAGAGCAGGCCAAAG............................................................................................................................................................... 16 1 16 0.06 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GATAGATCTGTCGTGC........... 16 2 16 0.06 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................GTAGCCCAACGGTAGA.................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0
...........AGCAGTGGTAGCTCGTCGG............................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTGGTCACTCGTCGTCAACGTCGAGGAGCCTGCGCCGTCGGGCGTTTCTCCATTTTGTGGGTCACTCGTCCGCCATGTCTCGTCCGGTGTCCTGGTCGTAAAAGGTGTCTGTGTTGTCGTCCTATAACTGCCGTCATCGGGTGGTCATCTTGAACGTTCCGCGGTCGACGGGGGGTTCGGGTGGTCGAACTCATAAAAATTGCCGGGGCACGGGTGACGCCCGCTATCCGGACAGCACGGCTCTTTCAGC
**********************************************************************************************....(((((...(((......(((.......((..((...(((...............)))...))..)).....))).....)))...)))))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.....................................................................CCGCCATGTCTCGTGCGG................................................................................................................................................................... 18 1 2 0.50 1 0 1 0 0 0 0
.........................GAGCCTGCGGCGTCG.................................................................................................................................................................................................................. 15 1 6 0.33 2 2 0 0 0 0 0
...............................................CTCTATTTTTCGGGTCACT........................................................................................................................................................................................ 19 3 20 0.15 3 0 0 3 0 0 0
..............................................................................................................................................GGTCATCTTGCACGTGC........................................................................................... 17 2 9 0.11 1 0 0 0 0 1 0
......................................................................................................AAGTGTCTGTGTCGCCGTCCT............................................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 1
..............................................................................CTCGATCGGTGTCCTGG........................................................................................................................................................... 17 2 11 0.09 1 1 0 0 0 0 0
.............................................................................................................................AACTGCAGTCATTGGG............................................................................................................. 16 2 15 0.07 1 0 0 0 1 0 0
..........................................................................................................................................................CGTTCTGCGGTCCACG................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0
....................................................................................................................................................................................................ATATTGCCCGGGCGCGG..................................... 17 3 20 0.05 1 1 0 0 0 0 0
.......................AGGAGCCTGTGGCGTCG.................................................................................................................................................................................................................. 17 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3685845-3686094 - dsi_27192 CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGCCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAGAGCAG---GCCACAGGACC---AGCA------------TTTTCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGACG-------------------G--------------CAGTAGCCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACCAGCT------TGAGTATTTTTAACGGCCCCG-------------------------------------------------------TGCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGTGCCGAGAAAGTCG
droSec2 scaffold_1:501197-501446 - CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAGAGCAG---GCCACAGGACC---AGCA------------TTTTCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGACG-------------------G--------------CAGTAGCCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACCAGCT------TGAGTATTTTTAACGGCCCGG-------------------------------------------------------TTCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGTGCCGAGAAAGTCG
dm3 chr2R:2819148-2819397 - CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCG---GTAGCCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAAAGCAG---GCCACAGGACC---AGCA------------TTTTCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACCAGTT------TGAGTATTTTTAACGGCCCCG-------------------------------------------------------TGCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGTGCCGCGAAAGTCG
droEre2 scaffold_4929:19730399-19730651 + CACCAGCGAGCAGCAGTTGCAACTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCAGCACAGAGCAG---ACCACAGGACC---AGCA------------TTTTCCACAGACAC---------ATCAG----------------------------CAGGA------TGTGATCGATG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------CAGGCGCCAGCTGCCCCC--CAAGCCCACCAGCT------TGAGCATTTTCAACGACCTAG-------------------------------------------------------TGTCCACTGC---------GG------------------------------TCGATAGGCCTGTCGTGCCCCGAAAGTCG
droYak3 2L:15552378-15552627 - CACCAGTGAGCAGCAGTTGCAACTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAGAGCAG---ACCACAGGACC---AGCA------------TTATCCACAGACAC---------ATCAG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACAAGCT------TGAGCGTTTTTAACGGCCCCC-------------------------------------------------------TCCCCACTGC---------GG------------------------------GCGATAGGCCTGTTGTGCCCCGAAAGTCG
droEug1 scf7180000409672:4844319-4844568 - CACCAGTGAGCAGCAGTTGCAGCTCCTTGGACGCG---GCAGCCCGCAAAGAGGTAAAG---CATCCACTGAGCAATCGGTACAGAGCAG---GCCACAGGACC---AGCA------------CTCCCCACAGGCAC---------AGCAT----------------------------CAGGA------T---ATTGAAG-------------------G--------------CAGTAGCCAG---------------------CCAGTAGAACTTGC---------CAGGCGCCATCTGCCCCC--CAAGCCCACCAGCT------TGAGCATTTTCAATGGTCCTG-------------------------------------------------------CGCCCAGTGC---------GG------------------------------GCGATAGGCCTCTGGTGCCGCGAAAGTCG
droBia1 scf7180000302292:3318298-3318553 + CACCAGTGAGCAGCAGCTGCAGCTCCTCGGACGCG---GAAGTCCGCAAAGAGGTAAAG---CAACCGGTGAGCAGGCGGC---------------ACAGGACC---AGCA------------TTTCCCAGCACAGG---------CCCA-ACCCCAGCAGCAGCAGCA---------GCAGGA------T---AGTGATG-------------------G--------------CATTAGCCAG---------------------CCAGTAGATCCCAT---------AAGGCGGCAGCTGCCGCC--CAAGCCCACCAACT------TGAGCATTTTCAATGGGCCCG-------------------------------------------------------CGCCCAGTGT---------GG------------------------------GAGATAGGCCCCTGGTGCCCCGAAAGTCG
droTak1 scf7180000415382:45174-45399 - CACCAGTGAGCAGCAGCTGCAGCTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAG---CAACCACTGAGCAGTCGGC---------------ACAGGACC---AGCA------------TTTCCCACAG---C---------AGCAG----------------------------CAGGA------T---------------------------------------------AGTAGCCAG---------------------CCAGTAGATCCCAC---------GAGGCGCCAGCTGCCGCC--AAAGCCCACCAGTT------TGAGCATTTTCAATGGCCCCG-------------------------------------------------------CGCCCAGTGT---------GG------------------------------GCGATAGGCCACTGGTGCCCCGAAAGTCC
droEle1 scf7180000491217:136986-137232 + CACCAGCGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGCCCGCAAAGAGGTAAAG---CACCCACTGAGCAGGCCACACAGAGCAG---GCCGCAGGAAC---GGCA------------TTGCCCACAGCC---------------G----------------------------AAGGA------C---GTTGATG-------------------G--------------CAGTAGCCAT------------------CCAGCAGTAGATCCTGC---------GCGGCGCCAGCTGCCGCC--CAAGCCCACCAGCC------TGAGCCTTTTCAATGGTCCCG-------------------------------------------------------CTCCCGGTGC---------GG------------------------------GCGATAGGCCCATGGTGCCCCGAAAGTCC
droRho1 scf7180000779196:225917-226169 - TACCAGCGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAG---CACCCACTGAGCAGGCAACACAGAGCAG---GCCACAGGAAC---GGCG------------TTCTCCACAGCCAC---------ATCAG----------CAG---------------CAGGA------T---ATTGAAG-------------------G--------------CAGTAGCCAG---------------------CCAGTAGATCCTGC---------GAGGCGCCAACTGCCGCC--CAAGCCCACCAGCT------TGAGCCTTTTCAATGGGCCCG-------------------------------------------------------CTCCCAGTGC---------GG------------------------------GTGATAGGCCAATGGTGCCCAGAAAGTCC
droFic1 scf7180000453955:451160-451409 + CACCAGCGAGCAGCAGCTGCAGCTCCTCGGACGGG---GCAGCCCGCAAAGAGGTAAAG---CATCCACTGAGCAGGCGACACAGAGCCGCACTCCCCTGGACC---AGCA------------CTCCCCACAGCCCC---------AGCAG----------------------------CAGCA------------------------------------G--------------CAGGAG-------------------------CCAGTAGAGCATGCTGGGCCACTGCGGCGACAGCTGCCGCC--CAAGCCCACCAGCT------TGAGTATTTTCAATGGGCCCG-------------------------------------------------------CTCCCAGTGC---------GG------------------------------GCGACAGGCCGCTGGTGCCCCGAAAGTCC
droKik1 scf7180000302630:136613-136883 - CACCAGCGAGCAGCAATTGCAGCTCCTCGGACGCG---GCAGTCCTCAAAGAGGTAAAGTGGCACCCACTGAGCAGGCACAACAGAGAGG---GACCCAGAAAC---CGCTCCCCGCAGGAGCTTCCCCGCTAGCAC---------AGCAG----------------------------CAGTCCAGTGAT---ACCGATG-------------------G--------------------CCAG------------------CAGCTCGTAGATCCTGC---------GAGGCGGCAACTACCGCC--GAAACCGACCAGCT------TGACCCTTTTCAATGGCCCCC----------------------------------------------------AAGCTCCCAGTGT---------GA------------------------------GCGATAGGCCCTTGGTGCCCCGCAAGTCG
droAna3 scaffold_13266:9145135-9145387 - CACCAGCGAACAGCAGCTGCAGCTCCTCGGACGCG---GCAGTCCCCAAAGAGGTAAAG---CCACCACTGAGCCGGC------------------ACAGGACC---AGCA------------CCCACCACCACCAC---------CACC-CCCCCAGCAGCAGCAGC---------AGGTGGC------C---AGTGA---------------------G--------------CTGCAG-------------------------CCAGTAGATCCTGT---------CAAGCGCCAGCTGCCGCC--CAAACCGAACAGCC------TGAGCCTTTTCAGTGGCCCAG-------------------------------------------------------CGCCCAACACGCTG--G-CCA------------------------------GCGACAAGCCCCTGGTGCCCCGAAAGTCA
droBip1 scf7180000396427:289396-289624 - CACCAGCGAGCAGCAGCTGCAGCTCCTCGGACGCG---GCAGTCCCCAAAGAGGTAAAACAGCCACCATTGAGCAGGC------------------ACAGGACC---AGCA------------CCCACCACCACCAC---------CACCC----------------------------CA---------------------------------------G--------------CAGCAG-------------------------CCAGTAGATCCTGT---------CAAGCGCCAGCTGCCGCC--CAAGCCGACCAGCC------TGAGCCTTTTCAGTGGCCCTG-------------------------------------------------------CGCCCAGCCT---GGCGCCTG------------------------------GCGACAAGCCCCTGGTGCCCCGAAAGTCA
dp5 3:1098707-1099007 - CTCCAGCGAGCAGCAGCTGCAGCTGCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAG---CAAACCA------------------CGT------------CGATCAGCC---------------------GCCCC---------AGCAG----------CAGCAGCCGGCACAAGGGACAGT------C---AGTGATA-------------------A--------------CGGTAGCCTC---------------------CCAGTAGAGCCTCCTGT---GATGCGGCGACAGCTGCCCCC--AAAGCCCACCAGCCTCTCCCTGAGCCTTTTCAATGGTACAGGTACAGGTACGGGGTCGGGTTCGGGTACGGGTACGGGTACGGGTTCGAATC-AGCCTCCCAGTGT---------GG------------------------------CCGACAAGCCATTGATACCCCGAAAGTCA
droPer2 scaffold_2:3767266-3767512 - CGGCGCTGATCAACAAACTCAACCAGCA-------------GGCCACCAAG------GA---CACCCAGGGGG-A--------------------CACGGG-ACACCAGCA------------GCACCAGCAGCAGC---------AGCAG----------------------------CAGAA------G---AAGAACGAGATCGCGGTGACGAGCGAGACGCTCTCGGAGCGCAGCA----ACCAGCA---------------GCAGTTGACGGTGC----ACAGCATGCCCCTCGGTGCCATCAGCAAGTCGGTGGCCC------TGGCCGTGTCCAATGCCGCCAA--------------------------------------------------GCCGCTCCTGGTGC---------AG------------------------------GTCA------------------CCAACCT
droWil2 scf2_1100000004513:2338174-2338375 - ATCCAGTGAGCAGCAGTTGCAGTTACTTGGACGCA---GTAGTCCGCAAAGAGGTAAAG---ATAAGGT------------------TAAA---------GAT------------------------------------------------------------------------------------------------------------------------------------CAACAGCCAG----GGACAATAGACGAACCAACGGTGAAACGTAC---------------CACATTGCCACC--AAAACCAACCAGCC------TTAGCATTTTCAATGGTCCTA-------------------------------------------------------CTCCTCCTCC---A--A-CAA------------------------------GTGATAAACCTTTAATACCAAGAAAATCG
droVir3 scaffold_12823:1648400-1648649 + CTCCAGCGAGCAGCAGCTTCAGCTGCTCGGACGCGCCAGCAGTCCGCACAGAGGTACGG---AAAAGAT------------------TAGGGTTAGCCCAGAGCAGCAGCA------------GCAGCAGCAG---C---------AGCAG----------------CAGC------AATTAGC------G---AGTGATA----------------------------------CAGCAGC--------A---------------ACAGTTGCTGGTGC------GTTGCGGCGCAAGCTGCCGCC--AAAGCCGATTAGCC------TCAGCATATTCAATGGGCCCG-------------------------------------------------------TGCCCGAGCC---------GGGCAACA------------------------CCATTAAGCCAGTGATACCTAGAAAGTTT
droMoj3 scaffold_6496:930022-930295 + TTCCAGCGAGCAGCAGCTGCAGCTGCTCGGACGCG---CCAGTCCGCACAGAGGTACGG---AAAAGTT------------------TAGCCTTAGTCTAGAGC---AGCA------------ACAACCACAGCTGCAGCAGCAGCAGCAG----------CAGAAGCAGTCGCAGCAGTTAGC------G---AGTGATA-------------------G--------------CAGCAACATT---------------------GC---------AGT---------TCGGCGTCCTTTGCCGCC--CAAGCCAATAAGCC------TGAGTATATTCAATGAAACGG-------------------------------------------------------GCAACAGCAA---------CT---------GCAACAGCAGCAGCAGCAGCAGCAACAAGCCAGTGATACCTAGAAAATTT
droGri2 scaffold_15245:16382897-16383173 - CAGCAGCGAGCAGCAGCTACAGTTGCTCGGACGCG---CCAGTCCGCACAGAGGTACGG---AAAAGCT------------------TAGAGTTAGTGTAGACCAACAGCA---------------GCAGCAGCAGC---------AGCAG----------------CAGCAACATTTGTTAGC------A---AATGATA-------------------G--------------CAGCAGC--A---------------------GCAGCAGCA-CAGT---------GCGGCGCAAGTTGCCGCC--CAAGCCGATTAGCC------TGAGCATATTTAATGGTCCAT-------------------------------------------------------CGCTTGAAGC---A--G-CGGGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAGCCAATGATACCTAGAAAGTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGCCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAGAGCAG---GCCACAGGACC---AGCA------------TTTTCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGACG-------------------G--------------CAGTAGCCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACCAGCT------TGAGTATTTTTAACGGCCCCG-------------------------------------------------------TGCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGTGCCGAGAAAGTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................AGTAGCCCA---------------------CCAGTAGAACTTGC---------....................................................................................................................................................................................................2312.00202000000000000000
.................................................AGAGGTAAAA---CACCCAGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000000000
....................................................................GTGAGCAGGCGGTACAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATAGGCCTGTCGTGCCG.........2011.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGT.............2711.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................TTTAACGGCCCCG-------------------------------------------------------TGCCCACTGC---------GG------------------------------.............................2511.00100000010000000000
................................................................................TACAGAGCAG---GCCACAGGACC---AGCA------------..........................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
................TTGCAGCTCCTCGGACGCG---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...........................................................................................................................................................................................................................................................................CAGTAGAACTTGC---------AAGGCGCC............................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................CCAGTAGAACTTGC---------AAGGC...............................................................................................................................................................................................1911.00101000000000000000
...................................................................................................................................................................................................................................................CA---------------------CCAGTAGAACTTGC---------AAG.................................................................................................................................................................................................1911.00101000000000000000
.............................................GCAAAGAGGTAAAA---C......................................................................................................................................................................................................................................................................................................................................................................................................................................1590.22200000000002000000
droSec2
CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAGAGCAG---GCCACAGGACC---AGCA------------TTTTCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGACG-------------------G--------------CAGTAGCCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACCAGCT------TGAGTATTTTTAACGGCCCGG-------------------------------------------------------TTCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGTGCCGAGAAAGTCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................AGCT------TGAGTATTTTTAACGG............................................................................................................................................2011.0010010
...........................................................................................................................................................................................................................................................................................................................CACCAGCT------TGAGTATTTTTAA...............................................................................................................................................2111.0010010
................................................................................TACAGAGCAG---GCCACAGGA...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
dm3
CACCAGTGAGCAGCAGTTGCAGCTCCTCGGACGCG---GTAGCCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAAAGCAG---GCCACAGGACC---AGCA------------TTTTCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACCAGTT------TGAGTATTTTTAACGGCCCCG-------------------------------------------------------TGCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGTGCCGCGAAAGTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................AACAG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGT......................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGT......................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCG---GTAGCCCGCAAAGAGGTAAAA---C......................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................................................................................................................................................................GTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCA...........................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TTCCACAGACAC---------AACAG----------------------------CA................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGCTCCTCGGACGCG---GTAGCCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TCCACAGACAC---------AACAG----------------------------CAGGA------T---ATTGA..............................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AC---------AACAG----------------------------CAGGA------T---ATTGAT.............................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................TG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------A...................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GACAC---------AACAG----------------------------CAGGA------T---ATTGAT.............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGGACGCG---GTAGCCCGCAAAGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTGTCGTGCCGCGAAAGTCG2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGGACC---AGCA------------TTTTCCACAGACAC---------AC.................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCAGCTCCTCGGACGCG---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AAAA---CACCCAGTGAGCAGGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................AGTGAGCAGGCGGTACAAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CAGTAGTCCA---------------------CCAGTAGAAC.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................AGTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCC............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CAGTAGAACTTGC---------AAGGCGCCAG..........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AGTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCA...........................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCAGCAGTTGCAGCTCCTCGGACGCG---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................GGTAAAA---CACCCAGTGAGCAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCGGACGCG---GTAGCCCGCAAAGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AACAG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGC......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TCCACAGACAC---------AACAG----------------------------CAGGA------T---ATT................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTGTCGTGCCGCGAAAGTC.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTGCAGCTCCTCGGACGCG---GTAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CTCCTCGGACGCG---GTAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AGTAGAACTTGC---------AAGGCGCC............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CTCCTCGGACGCG---GTAGCCCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......TGAGCAGCAGTTGCAGCTCCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCCTCGGACGCG---GTAGCCCGCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCG---GTAGCCCGCAAAGAGGTAAAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............GCAGTTGCAGCTCCTCGGACGCG---GT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................AGAACTTGC---------AAGGCGCCAGC.........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ACAG----------------------------CAGGA------T---ATTGATG-------------------G--------------C.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................AGGA------T---ATTGATG-------------------G--------------CAGTAGTC..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GAGCAGGCGGTACAAAGCAG---GCCACAGGA...............................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ATG-------------------G--------------CAGTAGTCCA---------------------CCAG.......................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AGTAGTCCA---------------------CCAGTAGAACTT...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................AGAGGTAAAA---CACCCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTGCAGCTCCTCGGACGCG---GTAGCCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGCTCCTCGGACGCG---GTAGCCCGCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCAGCTCCTCGGACGCG---GTAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGGACGCG---GTAGCCCGCAAAGAGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCG---GTAGCCCGCAAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCG---GTAGCCCGCAAAGAGGTAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................A---------------------CCAGTAGAACTTGC---------AAGGCGCCA...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCA...........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............GCAGTTGCAGCTCCTCGGACGCG---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CACCAGTGAGCAGCAGTTGCAGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGTGAGCAGCAGTTGCAGCTCCTCGGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCCA---------------------CCAGTAGAACTTGC---------AAGGCGC.............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................A------T---ATTGATG-------------------G--------------CAGTAGTCCA---------------------CC.........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCCTGTCGTGCCGCGAAAG...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCAGCTCCTCGGACGCG---GTAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CAC---------AACAG----------------------------CAGGA------T---ATTGAT.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACTGC---------GG------------------------------GCGATAGGCCTGTCGT.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................TCCACAGACAC---------AACAG----------------------------CAGGA------T---A..................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGC---------GG------------------------------GCGATAGGCCTGTCGTGC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AGGTAAAA---CACCCAGTGAGCAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................G----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGTAGTCC.................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGTTGCAGCTCCTCGGACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CCACAGGACC---AGCA------------TTTTCCACAGACA.............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AGCCCACCAGTT------TGAGTAT.....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTGCCGCGAAAGTCG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CACCAGCGAGCAGCAGTTGCAACTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCAGCACAGAGCAG---ACCACAGGACC---AGCA------------TTTTCCACAGACAC---------ATCAG----------------------------CAGGA------TGTGATCGATG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------CAGGCGCCAGCTGCCCCC--CAAGCCCACCAGCT------TGAGCATTTTCAACGACCTAG-------------------------------------------------------TGTCCACTGC---------GG------------------------------TCGATAGGCCTGTCGTGCCCCGAAAGTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................CAG----------------------------CAGGA------TGTGATCGATG-------------------G--------------CA........................................................................................................................................................................................................................................................2212.0020000200
..........................................................................................................................................................................................................................................................................CCAGTAGAACTTGC---------CAGGCGCCAGC.........................................................................................................................................................................................2511.0011000000
...................................................................................................................................................................................................................................................................................................................................................CAACGACCTAG-------------------------------------------------------TGTCCACTGC---------GG------------------------------TCG..........................2611.0010000010
...........................................CCGCAAAGAGGTAAAA---CAC....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.......................TCCTCGGACGCG---GCAGTCCGCAAAGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001
..........................................................................................................................................................................................................................................................................................................................................................CTAG-------------------------------------------------------TGTCCACTGC---------GG------------------------------TCGATA.......................2211.0010000010
................................................................................CACAGAGCAG---ACCACAGGACC---A.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
.............................................GCAAAGAGGTAAAA---CACCCAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................CAG----------------------------CAGGA------TGTGATCGAT.............................................................................................................................................................................................................................................................................................1811.0010000010
......................................................................................................................................................................................GA------TGTGATCGATG-------------------G--------------CAGTAGTCC.................................................................................................................................................................................................................................................2311.0010000100
...............GTTGCAACTCCTCGGACGCG---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................................................................................................GCA------------TTTTCCACAGACAC---------ATCAG----------------------------CAG...............................................................................................................................................................................................................................................................................................................2511.0011000000
....................................................................................................................................................................................................................................................A---------------------CCAGTAGAACTTGC---------CAGGCGCC............................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGGCCTGTCGTGCCCCGAA.....2211.0011000000
droYak3
CACCAGTGAGCAGCAGTTGCAACTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAA---CACCCAGTGAGCAGGCGGTACAGAGCAG---ACCACAGGACC---AGCA------------TTATCCACAGACAC---------ATCAG----------------------------CAGGA------T---ATTGATG-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACTTGC---------AAGGCGCCAGCTGCCCCC--CAAGCCCACAAGCT------TGAGCGTTTTTAACGGCCCCC-------------------------------------------------------TCCCCACTGC---------GG------------------------------GCGATAGGCCTGTTGTGCCCCGAAAGTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......GAGCAGCAGTTGCAACTCCTCGGACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................27118.0018000000000018
................................................................................................ACAGGACC---AGCA------------TTATCCAC..................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................TTGCAACTCCTCGGACGCG---GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........AGCAGTTGCAACTCCTCGGACGCG---GCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.................TGCAACTCCTCGGACGCG---GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................TTTAACGGCCCCC-------------------------------------------------------TCCCC...........................................................................1811.00100100000000
........................................................................................................................................................................................................G-------------------G--------------CAGTAGTCCA---------------------CCAGTAGAACT................................................................................................................................................................................................................2311.00100100000000
droEug1
CACCAGTGAGCAGCAGTTGCAGCTCCTTGGACGCG---GCAGCCCGCAAAGAGGTAAAG---CATCCACTGAGCAATCGGTACAGAGCAG---GCCACAGGACC---AGCA------------CTCCCCACAGGCAC---------AGCAT----------------------------CAGGA------T---ATTGAAG-------------------G--------------CAGTAGCCAG---------------------CCAGTAGAACTTGC---------CAGGCGCCATCTGCCCCC--CAAGCCCACCAGCT------TGAGCATTTTCAATGGTCCTG-------------------------------------------------------CGCCCAGTGC---------GG------------------------------GCGATAGGCCTCTGGTGCCGCGAAAGTCGSizeHit CountTotal NormTotal
No Reads
droBia1
CACCAGTGAGCAGCAGCTGCAGCTCCTCGGACGCG---GAAGTCCGCAAAGAGGTAAAG---CAACCGGTGAGCAGGCGGC---------------ACAGGACC---AGCA------------TTTCCCAGCACAGG---------CCCA-ACCCCAGCAGCAGCAGCA---------GCAGGA------T---AGTGATG-------------------G--------------CATTAGCCAG---------------------CCAGTAGATCCCAT---------AAGGCGGCAGCTGCCGCC--CAAGCCCACCAACT------TGAGCATTTTCAATGGGCCCG-------------------------------------------------------CGCCCAGTGT---------GG------------------------------GAGATAGGCCCCTGGTGCCCCGAAAGTCGSizeHit CountTotal NormTotal
No Reads
droTak1
CACCAGTGAGCAGCAGCTGCAGCTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAG---CAACCACTGAGCAGTCGGC---------------ACAGGACC---AGCA------------TTTCCCACAG---C---------AGCAG----------------------------CAGGA------T---------------------------------------------AGTAGCCAG---------------------CCAGTAGATCCCAC---------GAGGCGCCAGCTGCCGCC--AAAGCCCACCAGTT------TGAGCATTTTCAATGGCCCCG-------------------------------------------------------CGCCCAGTGT---------GG------------------------------GCGATAGGCCACTGGTGCCCCGAAAGTCCSizeHit CountTotal NormTotal
No Reads
droEle1
CACCAGCGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGCCCGCAAAGAGGTAAAG---CACCCACTGAGCAGGCCACACAGAGCAG---GCCGCAGGAAC---GGCA------------TTGCCCACAGCC---------------G----------------------------AAGGA------C---GTTGATG-------------------G--------------CAGTAGCCAT------------------CCAGCAGTAGATCCTGC---------GCGGCGCCAGCTGCCGCC--CAAGCCCACCAGCC------TGAGCCTTTTCAATGGTCCCG-------------------------------------------------------CTCCCGGTGC---------GG------------------------------GCGATAGGCCCATGGTGCCCCGAAAGTCCSizeHit CountTotal NormTotal
No Reads
droRho1
TACCAGCGAGCAGCAGTTGCAGCTCCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAG---CACCCACTGAGCAGGCAACACAGAGCAG---GCCACAGGAAC---GGCG------------TTCTCCACAGCCAC---------ATCAG----------CAG---------------CAGGA------T---ATTGAAG-------------------G--------------CAGTAGCCAG---------------------CCAGTAGATCCTGC---------GAGGCGCCAACTGCCGCC--CAAGCCCACCAGCT------TGAGCCTTTTCAATGGGCCCG-------------------------------------------------------CTCCCAGTGC---------GG------------------------------GTGATAGGCCAATGGTGCCCAGAAAGTCCSizeHit CountTotal NormTotal
No Reads
droFic1
CACCAGCGAGCAGCAGCTGCAGCTCCTCGGACGGG---GCAGCCCGCAAAGAGGTAAAG---CATCCACTGAGCAGGCGACACAGAGCCGCACTCCCCTGGACC---AGCA------------CTCCCCACAGCCCC---------AGCAG----------------------------CAGCA------------------------------------G--------------CAGGAG-------------------------CCAGTAGAGCATGCTGGGCCACTGCGGCGACAGCTGCCGCC--CAAGCCCACCAGCT------TGAGTATTTTCAATGGGCCCG-------------------------------------------------------CTCCCAGTGC---------GG------------------------------GCGACAGGCCGCTGGTGCCCCGAAAGTCCSizeHit CountTotal NormTotal
No Reads
droKik1
CACCAGCGAGCAGCAATTGCAGCTCCTCGGACGCG---GCAGTCCTCAAAGAGGTAAAGTGGCACCCACTGAGCAGGCACAACAGAGAGG---GACCCAGAAAC---CGCTCCCCGCAGGAGCTTCCCCGCTAGCAC---------AGCAG----------------------------CAGTCCAGTGAT---ACCGATG-------------------G--------------------CCAG------------------CAGCTCGTAGATCCTGC---------GAGGCGGCAACTACCGCC--GAAACCGACCAGCT------TGACCCTTTTCAATGGCCCCC----------------------------------------------------AAGCTCCCAGTGT---------GA------------------------------GCGATAGGCCCTTGGTGCCCCGCAAGTCGSizeHit CountTotal NormTotal
No Reads
droAna3
CACCAGCGAACAGCAGCTGCAGCTCCTCGGACGCG---GCAGTCCCCAAAGAGGTAAAG---CCACCACTGAGCCGGC------------------ACAGGACC---AGCA------------CCCACCACCACCAC---------CACC-CCCCCAGCAGCAGCAGC---------AGGTGGC------C---AGTGA---------------------G--------------CTGCAG-------------------------CCAGTAGATCCTGT---------CAAGCGCCAGCTGCCGCC--CAAACCGAACAGCC------TGAGCCTTTTCAGTGGCCCAG-------------------------------------------------------CGCCCAACACGCTG--G-CCA------------------------------GCGACAAGCCCCTGGTGCCCCGAAAGTCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................G---CCACCACTGAGCCGGC------------------ACAGGACC---AG........................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................GCC--CAAACCGAACAGCC------TGAGC.......................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................AG-------------------------CCAGTAGATCCTGT---------CAAG................................................................................................................................................................................................2011.001001000
.......................................................AAAG---CCACCACTGAGCCGGC------------------ACAG.................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................AGCAGC---------AGGTGGC------C---AGTGA---------------------G--------------CT........................................................................................................................................................................................................................................................2211.001010000
..........................................................G---CCACCACTGAGCCGGC------------------ACAGGACC---..........................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................................................................................................................................................CCAGCAGCAGCAGC---------AGGTGGC------.......................................................................................................................................................................................................................................................................................................2130.331001000
.............................................................................................................................................................GCAGCAGCAGC---------AGGTGGC------C---...................................................................................................................................................................................................................................................................................................1930.331000001
.............................................................................................................................................................GCAGCAGCAGC---------AGGTGGC------.......................................................................................................................................................................................................................................................................................................1880.131100000
droBip1
CACCAGCGAGCAGCAGCTGCAGCTCCTCGGACGCG---GCAGTCCCCAAAGAGGTAAAACAGCCACCATTGAGCAGGC------------------ACAGGACC---AGCA------------CCCACCACCACCAC---------CACCC----------------------------CA---------------------------------------G--------------CAGCAG-------------------------CCAGTAGATCCTGT---------CAAGCGCCAGCTGCCGCC--CAAGCCGACCAGCC------TGAGCCTTTTCAGTGGCCCTG-------------------------------------------------------CGCCCAGCCT---GGCGCCTG------------------------------GCGACAAGCCCCTGGTGCCCCGAAAGTCASizeHit CountTotal NormTotal
No Reads
dp5
CTCCAGCGAGCAGCAGCTGCAGCTGCTCGGACGCG---GCAGTCCGCAAAGAGGTAAAG---CAAACCA------------------CGT------------CGATCAGCC---------------------GCCCC---------AGCAG----------CAGCAGCCGGCACAAGGGACAGT------C---AGTGATA-------------------A--------------CGGTAGCCTC---------------------CCAGTAGAGCCTCCTGT---GATGCGGCGACAGCTGCCCCC--AAAGCCCACCAGCCTCTCCCTGAGCCTTTTCAATGGTACAGGTACAGGTACGGGGTCGGGTTCGGGTACGGGTACGGGTACGGGTTCGAATC-AGCCTCCCAGTGT---------GG------------------------------CCGACAAGCCATTGATACCCCGAAAGTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................GCAGCTGCTCGGACGCG---GCAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
....................AGCTGCTCGGACGCG---GCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..................GCAGCTGCTCGGACGCG---GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.............CAGCTGCAGCTGCTCGGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................TCGGGTACGGGTACGGGTA................................................................................................1950.2010100000000
droPer2
CGGCGCTGATCAACAAACTCAACCAGCA-------------GGCCACCAAG------GA---CACCCAGGGGG-A--------------------CACGGG-ACACCAGCA------------GCACCAGCAGCAGC---------AGCAG----------------------------CAGAA------G---AAGAACGAGATCGCGGTGACGAGCGAGACGCTCTCGGAGCGCAGCA----ACCAGCA---------------GCAGTTGACGGTGC----ACAGCATGCCCCTCGGTGCCATCAGCAAGTCGGTGGCCC------TGGCCGTGTCCAATGCCGCCAA--------------------------------------------------GCCGCTCCTGGTGC---------AG------------------------------GTCA------------------CCAACCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................ACCAGCA------------GCACCAGCAGCAGC---------AG.................................................................................................................................................................................................................................................................................................................................................23130.081010000
droWil2
ATCCAGTGAGCAGCAGTTGCAGTTACTTGGACGCA---GTAGTCCGCAAAGAGGTAAAG---ATAAGGT------------------TAAA---------GAT------------------------------------------------------------------------------------------------------------------------------------CAACAGCCAG----GGACAATAGACGAACCAACGGTGAAACGTAC---------------CACATTGCCACC--AAAACCAACCAGCC------TTAGCATTTTCAATGGTCCTA-------------------------------------------------------CTCCTCCTCC---A--A-CAA------------------------------GTGATAAACCTTTAATACCAAGAAAATCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................AGGT------------------TAAA---------GAT------------------------------------------------------------------------------------------------------------------------------------CAACAGC...................................................................................................................................................................................................................................................1811.00100001
.....................................................................................................AT------------------------------------------------------------------------------------------------------------------------------------CAACAGCCAG----GGACAATAGAC.................................................................................................................................................................................................................................2311.00100100
...............................................................................................................................................................................................................................................................................................................CACC--AAAACCAACCAGCC------TTAGC.......................................................................................................................................................2311.00101000
........................................................................................AAA---------GAT------------------------------------------------------------------------------------------------------------------------------------CAACAGCCAG----GGACAATAGA..................................................................................................................................................................................................................................2611.00100010
...........................................................................................................................................................................................................................................CAACAGCCAG----GGACAATAGAC.................................................................................................................................................................................................................................2111.00100010
..CCAGTGAGCAGCAGTTGCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................AAACGTAC---------------CACATTGCCACC--................................................................................................................................................................................2011.00101000
....AGTGAGCAGCAGTTGCAGTTACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
ATCCAGTGAGCAGCAGTTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
CTCCAGCGAGCAGCAGCTTCAGCTGCTCGGACGCGCCAGCAGTCCGCACAGAGGTACGG---AAAAGAT------------------TAGGGTTAGCCCAGAGCAGCAGCA------------GCAGCAGCAG---C---------AGCAG----------------CAGC------AATTAGC------G---AGTGATA----------------------------------CAGCAGC--------A---------------ACAGTTGCTGGTGC------GTTGCGGCGCAAGCTGCCGCC--AAAGCCGATTAGCC------TCAGCATATTCAATGGGCCCG-------------------------------------------------------TGCCCGAGCC---------GGGCAACA------------------------CCATTAAGCCAGTGATACCTAGAAAGTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................AGCAGTCCGCACAGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000001000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................AATTAGC------G---AGTGATA----------------------------------CAGCA.....................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000100000000000000000000001000
.......................................CAGTCCGCACAGAGGTACGG---AAAAGAA------------------..............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
..............AGCTTCAGCTGCTCGGACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.....................................................GTACGG---AAAAGAT------------------TAGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................AG----------------CAGC------AATTAGC------G---AGTGATA----------------------------------C.........................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................C------AATTAGC------G---AGTGATA----------------------------------CA........................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
................................................CAGAGGTACGG---AAAAGAT------------------TAGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................GCAG----------------CAGC------AATTAGC------G---AGTGATA----------------------------------CAGC......................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................A---------------ACAGTTGCTGGTGC------GTT....................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................GC------AATTAGC------G---AGTGATA----------------------------------CAGCAGC--------...........................................................................................................................................................................................................................................2411.001000000000001000000000000000000000000000000000000000000000000000
..CCAGCGAGCAGCAGCTTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------------CCATTAAGCCAGTGATACCTA........2611.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GGGCCCG-------------------------------------------------------TGCCCGAGCC---------GGGCAACA------------------------CC...........................2711.001000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................GCAG----------------CAGC------AATTAGC------G---AGTGAT.............................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................C--------A---------------ACAGTTGCTGGTGC------GTTGC..................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................ATTAGC------G---AGTGATA----------------------------------CAGCAGC--------A---------------A..........................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................GTTAGCCCAGAGCAGCAGCA------------GCAGCA....................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................CAGCAGCAG---C---------AGCAG----------------CAGC------A...................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
...................................................................................................AGAGCAGCAGCA------------GCAGCAGCAG---C---------A..................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................CAGCA------------GCAGCAGCAG---C---------AGCAG----------------..............................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTCCAGCGAGCAGCAGCTGCAGCTGCTCGGACGCG---CCAGTCCGCACAGAGGTACGG---AAAAGTT------------------TAGCCTTAGTCTAGAGC---AGCA------------ACAACCACAGCTGCAGCAGCAGCAGCAG----------CAGAAGCAGTCGCAGCAGTTAGC------G---AGTGATA-------------------G--------------CAGCAACATT---------------------GC---------AGT---------TCGGCGTCCTTTGCCGCC--CAAGCCAATAAGCC------TGAGTATATTCAATGAAACGG-------------------------------------------------------GCAACAGCAA---------CT---------GCAACAGCAGCAGCAGCAGCAGCAACAAGCCAGTGATACCTAGAAAATTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................ACGG-------------------------------------------------------GCAACAGCAA---------CT---------GCAACAGCA.........................................2511.001100000
..............................................................................................................................................................................................G---AGTGATA-------------------G--------------CAGCAACATT---------------------GC---------AG..............................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGCCAGTGATACCTAGA......2111.001100000
..........................................................G---AAAAGTT------------------TAGCCTTAGTCTAGAGC---..........................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................AGCCTTAGTCTAGAGC---AG........................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.....................................................................................................................................................................................................................................................................................................................................................ATGAAACGG-------------------------------------------------------GCAACAGCAA---------CT---------GC................................................2311.001100000
...........................................................................................................................................................................CGCAGCAGTTAGC------G---AGTGATA-------------------G--------------C.........................................................................................................................................................................................................................................................2311.001000001
............................................................................................................................................AGCAGCAGCAG----------CAGAAGCAGTC.........................................................................................................................................................................................................................................................................................................................2220.501000010
...........................................................................................................................ACAACCACAGCTGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................2320.501100000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA---------CT---------GCAACAGCA.........................................20200.051100000
droGri2
CAGCAGCGAGCAGCAGCTACAGTTGCTCGGACGCG---CCAGTCCGCACAGAGGTACGG---AAAAGCT------------------TAGAGTTAGTGTAGACCAACAGCA---------------GCAGCAGCAGC---------AGCAG----------------CAGCAACATTTGTTAGC------A---AATGATA-------------------G--------------CAGCAGC--A---------------------GCAGCAGCA-CAGT---------GCGGCGCAAGTTGCCGCC--CAAGCCGATTAGCC------TGAGCATATTTAATGGTCCAT-------------------------------------------------------CGCTTGAAGC---A--G-CGGGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAGCCAATGATACCTAGAAAGTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................GCT------------------TAGAGTTAGTGTAGACCAACA.........................................................................................................................................................................................................................................................................................................................................................................................2411.00101
.............................................................................................................................................................................................................................................................................................................................................CATATTTAATGGTCCAT-------------------------------------------------------C...............................................................................1811.00110

Generated: 05/18/2015 at 04:27 PM