ID:

dsi_27137

 Coordinate:

3l:13666603-13666830 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.8 -32.8 -32.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACGTGTTAGTTTGGCTGTAAAAGCACTTTTAAAAATTACGATTTCTTATTAGCGTGTTGGAAAAGAGGAAAACACACACATTGTGAGAGGCAAAATACGTGCGGAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGTACTAGCCGCGGTCTATATATACATATATATATATTATTTGTGTGAGTGTAGGAGAGGTATAACTAATTCTACAAAAAGTATAGTTTACTTGGCTGTGTGGTTCGATTCTGAATTAATTTCATAGTCTTCGGCAGTAAGGTGTCC
**********************************************************************************************...(((.(((((............((((.....)))).........((((((....(((((..((.........)).)))))..)))))).))))))))..(((((((.((((((.(((.....))).)))))).))))))).......************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902008
ovaries
 M023
head
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 O002
Head
 SRR553487
NRT_0-2 hours eggs
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTA..................................................................................... 21 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTATA................................................................................... 21 0 1 9.00 9 8 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................GTGTAGCGTAGGTGGGA..................................................................................................................................................................... 17 2 6 7.67 46 0 46 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGAGTGTAGGAGAGGTATAAC................................................................................. 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTAGCGTAGGTGGGA..................................................................................................................................................................... 15 1 4 5.25 21 0 21 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGT...................................................................................... 20 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CATGCGTAGTGTAGGTGGGA..................................................................................................................................................................... 20 3 2 5.00 10 0 0 10 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTGTGTGAGTGTAGGAGAGG....................................................................................... 21 0 1 5.00 5 4 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTGT.................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTAA.................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTT..................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTGTGTGAGTGTAGGAGAGGT...................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGAGTGTAGGAGAGGTATAA.................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................AATTGATTTCATGGTCTTCGG............. 21 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTGTGAGTGTAGGAGAGGTAT.................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTAGCGTGTTGGAAAAGAGGA..................................................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TAGGAGAGGTATAACTAATTA........................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTG..................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTA..................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTAT.................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CGTGGGTGGGAGCGAGACGA............................................................................................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................GAAACGTGTTGGTTTGGCTGT........................................................................................................................................................................................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AGCGTGGGTGGGAGCGAGACG............................................................................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................GAAACGTGTTAGTTTGGCTGT........................................................................................................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................GTTTACTTGGCTGTGTGGTTC......................................... 21 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................AGTTTACTTGGCTGTGTGGTTT......................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGTAGGAGAGGTATAACTAAT............................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......CGAGCGCGGCAATCGCAGAACT............................................................................................................................................................................................................................................................................................................ 22 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTGTGAGTGTAGGAGAGGTGT.................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCGGAGCGTGGGTGGGAGCG.................................................................................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................TAATTTCATAGTCTTCGGCAG.......... 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTTT.................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TAGCCGCGGTCTATATATACA......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTATT................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGGGAGG....................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GCGTAGCGTAGGTGGGAGA................................................................................................................................................................... 19 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................ATAGTTTACTTGGCTGTGTGGA........................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TACTAGCCGCGGTCTATATAA............................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTGTGAGTGTAGGAGAGGTAA.................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......CGAGCGCGGCAATAGCAGAACT............................................................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................ATTGATTTCATGGTCTTCGGC............ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTATTA.................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CGATTTCTTATTAGCGTGTTG............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGA...................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TTAGTTTGGCTGTAGAGGCA................................................................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTGAGTGTAGGAGAGGTATAA.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTAAACGTGTACTAGCCGCG...................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTGTGAGTGTAGGAGAGGTATTT.................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGGTAT.................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTGGGAGAGGTA..................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAGGCAAGATACGTGCGGAGC............................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................GGAGCGTAGGTGGGA..................................................................................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................GGTCTTCGGCGGTAAGGTGTC. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................GTGCGGAGCGTAGGTGGGAG.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTATGA.................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TAGGAGAGGTATAACTAATTC........................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................AATTCCCCTGTGAAACGTG..................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................TACTTGGCTGTGTGGTTCGAT...................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TAGCGTAGGTGGGAG.................................................................................................................................................................... 15 1 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGTGCGGAGCGTGGGTGGGAG.................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................TTACTTGGCTGTGTGGTTT......................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................AATTAATTTCATAGTCTTCGAC............ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................ATAGTCTTCGGCAGTAGGGTG... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............CCAATCGCAGAACTATGAAAT..................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCGGAGCGTAGGTGGGAGCGT................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............GCAATCGCAGAACTATGAAATTCCCC................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TGGTCTTCGGCGGTAGGGTGTC. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................TTTACTTGGCTGTGTGGTTCG........................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGTTGGAAAAGAGGAAAACAC............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................AGCGTAGGTGGGAGCGAGACG............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................ATTAGCGTGTTGGAAAAAAA....................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................AATTCCCCTGTGAAACGTGTT................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................TTTCTTATTAGCGTGTTGGA............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CGTGGGTGGGAGCGAGACGAC........................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGAGG....................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGATGT...................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATTATTTGTGTGAGTGTAGGAGAGGT...................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TAGTCTTCGGCAGTAAGGTG... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTGTGTGAGTGTAGGAGAGGTT..................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................CGTAGGTGGGAGCGAGACGA............................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TTAATTTCATAGTCTTCGGCATT......... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGAGTGTAGGAGAGGTATA................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTGTGTGAGTGTGGGAGAGG....................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TATTTGTGTGAGTGTAGGAGA......................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTAGGAGGGGTGT.................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................TCGCAGAACTATGAAATTCC.................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TCTGAATTAATTTCATAGTCT................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TTAATTTCATAGTCTTCGGCA........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................ATAGTCTACTTGGCTGTGTGGT........................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............GCCAATCGCAGAACTATGAAA...................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................TTACTTGGCTGTGTGGTTTA........................................ 20 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................TAATTTCATGGTCTTCGGCAA.......... 21 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGAGTGTAGGAGAGGTTTT................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................TGGTTCGATTCTGAATTAATT.......................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AGCGTGGGTGGGAGCGGGACG............................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................AAAAGCACTTTGAAAA........................................................................................................................................................................................................................................................ 16 1 20 0.55 11 0 2 3 0 0 0 0 0 0 0 0 6
................................................................................................AGCGTGTTGGAAAAGATAA..................................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTGTGAGTGTGGGAGAGGTGT.................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGGTGGGAGCGAGACGACGTT........................................................................................................................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCGGAGCGTAGGTGGGATTA.................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................AAACGTGTTGGTTTGGCTGTAT...................................................................................................................................................................................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TGGTCTTCGGCAGTAGGGTGTA. 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGGTGGGAGCGAGACGACG.......................................................................................................................................................... 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AATTGCGTGTTGGAAAAGAGGC..................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GTGGGTGGGAGCGGGACGACG.......................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCGTAGTGTAGGTGGGA..................................................................................................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTGTAGCGTAGGTGGGAG.................................................................................................................................................................... 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AGCGTAGGTGGGAGTA.................................................................................................................................................................. 16 2 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCGTAGTGTAGGTGGGAGA................................................................................................................................................................... 20 3 8 0.25 2 0 0 2 0 0 0 0 0 0 0 0 0
................................................................AAAAGCACTTTGAAA......................................................................................................................................................................................................................................................... 15 1 20 0.25 5 0 1 4 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GCGTAGTGTAGGTGGGAGA................................................................................................................................................................... 19 3 18 0.17 3 0 0 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CATGCGTAGTGTAGGTGG....................................................................................................................................................................... 18 3 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CCCTAAGCGTGTACTA............................................................................................................................................ 16 2 14 0.14 2 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................ATGCGTAGTGTAGGTGGGA..................................................................................................................................................................... 19 3 15 0.13 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGCGTAGGTGGGAGT................................................................................................................................................................... 16 2 16 0.13 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................TCCCCTGTGAAACGAGG.................................................................................................................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................................................................................TTGCTTGGCTGTGTGGTTT......................................... 19 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CTGTCTGGTCCGGTTCTGA................................. 19 3 18 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................GAGCCTAGGTGGGAGA................................................................................................................................................................... 16 2 19 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................TCTGTGGTTCGATTCCG.................................. 17 2 19 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CGAGCCTAGGTGGGA..................................................................................................................................................................... 15 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGGTGGGAGCGAGACGACT.......................................................................................................................................................... 19 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTGTAGCGTAGGTGGGAGT................................................................................................................................................................... 19 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................GGTTGTCTGGTTCGGTTCTG.................................. 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCGGAGCGTGGGTGGGATA................................................................................................................................................................... 20 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................GTTGTTAGTTTGGCTGTAAG..................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................AACTTGGCAGTGTGGTT.......................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................ATGCGTAGTGTAGGTGGG...................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCATACGCTCGCGCCGTTAGCGTCTTGATACTTTAAGGGGACACTTTGCACAATCAAACCGACATTTTCGTGAAAATTTTTAATGCTAAAGAATAATCGCACAACCTTTTCTCCTTTTGTGTGTGTAACACTCTCCGTTTTATGCACGCCTCGCATCCACCCTCGCTCTGCTGCGATTTGCACATGATCGGCGCCAGATATATATGTATATATATATAATAAACACACTCACATCCTCTCCATATTGATTAAGATGTTTTTCATATCAAATGAACCGACACACCAAGCTAAGACTTAATTAAAGTATCAGAAGCCGTCATTCCACAGG
*************************************************************************************...(((.(((((............((((.....)))).........((((((....(((((..((.........)).)))))..)))))).))))))))..(((((((.((((((.(((.....))).)))))).))))))).......********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
.........................................................................................................................................................................................................................................................................................................ATTAAAGTATCAGAAGCCGTC.......... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..................AGCGTCTTGATACTTTAAGGG................................................................................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0
..........................................................................................................................................................................................................................................................................................................TTAAAGTATCAGAAGCCGTCA......... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................ATGTATCAGAAGCCGTCATT....... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ACACACTCACATCCTCTCCAT..................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................ATTAAAGTGTCAGAAGCCGTC.......... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TTTGCACATGATCGGCGCCAG................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........TCGCGCGGTTAGCGTCTTGAT........................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................GTCGGCGCCAGGTATATATGT......................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................TTAATTAAAGTATCAGAAGCC............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATCAGAAGCCGTCATTCCAC... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ACATGATCGGCGCCAGATATA.............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................TTCTCCTTTTGTGTGTGTAAC....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CACACTCACATCCTCTCCATA.................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTGGCGCCAGATGTATATGTAT....................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TTGATTAAGATGTTTTTCATA............................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGTAACACTCTCCGTTTTATG........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GGCGCCAGGTATATATGTATAT..................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................GTATCAGGAGCCGTCATTCCAC... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............GCGGTTAGCGTCTTGATACTT....................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TATCGGCGCCAGGTATATATGTA........................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CACTCACATCCTCTCCATATT.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTTTTCTCCTTTTGTGTGTGT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATCAGAAGCCGTCATTCCACA.. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GCCTCGCATCCACCCTCGCTC................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........TGCCGTTAGCGTCTTGATACTT....................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................TCGTGAAAATTTTTAATG................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CTTAATTAAAGTATCAGAAGC.............. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TATCAGAAGCCGTCATTCCGC... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............CCGTTAGCGTCTTGATACTTT...................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACCCTCGCTCTGCTGCGGTTT..................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................CGTGAAAATTTTTAATGCTAA............................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........TCGCGCCGTTAGCGTCTTGGT........................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................TACTTTAAGGGGACACTTTGC....................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACGCCTCGCGTCCACCCTCGC.................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TTGGTTAAGATGTTTTTCATA............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATCGGCGCCAGGTGTATATGT......................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................ATGAACCGGCACACCAAGC........................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....CGCTCGCGCCGTTAGCGTCTTG............................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GGCGCCAGATATATATGTAT....................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................ACACACCAAGCTAAGACTTAA.............................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................CCACCCTCGGTCTGCTG........................................................................................................................................................... 17 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................AAAAGTATCAGAAGCCGTCATTC...... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................CACATGATCGGCGCCAGGTGT............................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................AAGTATCAGAAGCCGTCATT....... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATGCACGGCTTGCATC........................................................................................................................................................................... 16 2 13 0.15 2 0 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGACCCCAAGCCAAGACTTA............................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................ACAGTCTCCGTTTTATC........................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:13666553-13666880 + dsi_27137 AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACGTGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATT-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATAT--AT--------ATAT--------------------------------------ATTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AACTAATTCTACAAAA------------------------AGTATAGTTTACTTGGCTGTGTGGTTC------GAT-------TCTGAATTAATTTCATAG--TCTTCGGCAGTA---AGGTG--TCC
droSec2 scaffold_0:6141990-6142318 + AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACGTGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATT-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTATCCGCGGTCTATATATACATAG--AT--------ATAT--------------------------------------ATTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AACTAATTCTACAAAA-----------------------AAGTATAGTTTACTTGGCTGTGTGGTTC------GAT-------TCTGAATTAATTTCATAG--TCTTCGGCAGTA---AGGTG--TCA
dm3 chr3L:13995352-13995678 + AGTATGCGAACGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACATGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATG-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GATCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AATATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AACTAATTCTACAAAA-----------------------AAATATAGTTTACTTGGCTGAGTGGTTC------GCT-------TCTGAATTAGTTTCGCAC--TCTTCGGCAGTA---TGGTG--GCC
droEre2 scaffold_4784:13987355-13987683 + AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTACCCCGTGAAACGTGTTAGTT-TGGCTG-TTAAAGCACTTTTAAAAATG-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATAT--AT--------ATAT--------------------------------------AATATTTGTGTGA--------GTGTAGGA---GAAGTAT----------AACTAATTCTACAAAA-----------------------AAGTATAGTTTACTTGACTGTGTGGTTC------GAT-------TCTGAATTAATTTCATAG--TCTTCGGCCGAT---AGATG--GCC
droYak3 3L:14083037-14083367 + AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATG-AAGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGACAAAATACGAGCA--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATATATAT--------ATAT--------------------------------------AATATTTGTGTGA--------GTGTAAGA---GAGGTAT----------AACTAATTCTACAAAA-----------------------AAGTATAGTTTATTTGACTGTGTGGTTC------GAT-------TCTGAATAAATTTCATAG--TCTTTAGCCGAA---AGATG--GCC
droEug1 scf7180000409456:181007-181330 + AGTTTGCGAGCGCGGCAATCGCAGAACTATGAAATTTTCCTGAGAAATGTGTTAGTT-TGGCTG-AAAAAGAACTTTTAAA--TTGACGA----CTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------TACAATGTGAGAGGCAAAATATGTGAA--GACCGTAGGTGGGAACGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCCATATATACATACATAT--------ATAT--------------------------------------AGTATTTGTGTTA--------GTGTAGG----GAGATAT----------AAAGAATTGTACAAAA------------------------AATATAGTTTACTTTACTTTCCGTTCC------GTT-------TGTGAATTAATTTTATAA--TTTTTGGCCGAT---AGGTG--ACC
droBia1 scf7180000302428:5918349-5918673 - AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TGGCTG-CAAGAGCACTTTTAAT--TTGACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGCA--GGGCGTAGGTGGGAGCGAGATGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---AAGGTAT----------AAAGAATTGTACAAAA------------------------AGTATAGTTTACTTGACTGTGCGCTCA------ATT-------TCTGAATTAATTTCATAG--TCTTTGGCCGAA---AGGTG--GCC
droTak1 scf7180000415667:122860-123184 - AGTATGCGAGCACGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TGGCTG-CAAAAGCACTTTTAAT--TTGGCGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGCA--GGGCGTAGGTGGGAGCGAGATGACGCTAAACGTGC----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AAAGAATTGTTCAAAA------------------------AGTATAGTTTACTTGGCTGTGCGCTCC------GAT-------TCTGAATTAATTGTATAG--TCTTTGGTCGAA---AGGCG--GCC
droEle1 scf7180000491255:2450286-2450610 + AGTATGCGAACGCGCCAATCGCAGAACTATGAAATTCCACCGTGAAACGTGTTAGTTTTGGCTG-CAAAAGCACTTTTAAC--TT-ACGTTTTCCTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGCG--GTGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTCGTGTGA--------GTGTAGGA---GAGGTAT----------AAAGAATTGTACAAAA------------------------AGTATAGTTTACTTGACTTTGCGCTCC------GTT-------TCGGAAATAATTTCCTAC--TCTTAGGCCAAA---AGGCG--CCC
droRho1 scf7180000760202:97219-97542 - AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TAGCTG-CAAAAGCACTTTTAAT--TT-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGGAAAATACGTGCG--GAGCGTAGGTAGGAGTGAGACAACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---GAGATAT----------AAAGAATTGTACAAAA------------------------AGTATAGTTTACTTGACTGTGCGTTCC------GTT-------TCTGAAATAATTTCCTAG--TCTTCGTACGAA---ACTTG--GCC
droFic1 scf7180000453784:315775-316098 + AGTATGCGAACGCGGCAATCGCAGAACTATGAAATTCCTCCGTGAAACGTGTTAGTT-TGTCTG-CAAAAGTGCTTTGAAT--TC-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGGG--GAGCGTATGTTGGAGCGAGATGACGCTAAACGTCT----ACTAGCCGCGGTCCATATATACATA----T--------ATAT--------------------------------------AGTATTTGCATGA--------GTGTAGGA---GAGGTAT----------AAAGAATTGTACAAAA------------------------AATATAGTTTACTTGACTATGTCGTGC------ATT-------TTTAAGTTAATGTCATAG--GCTTCGGCCAAG---AGGCG--ACC
droKik1 scf7180000302441:2812475-2812797 + AGCATGCGAGCCCAGCAATCGCAGCACTATGAAATTTTCCCGAGAAACGTGTTAGTT-TGTCTG-CAAATTCACTTTTAAT--TT-ACGATTTCTTATTAGCGTGTTGGGGGGAAAAA-GA-GGAAAACAC---------ACAATGTGAGAGGCAAAATACGTGCG--GAGCGCAAGTGTGAGCGAGATGACGCTAAACGTGT----ACTAGCAGCGGTCTATATGTA--------T--------ATGA--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AAGAAATTGTACAAAA------------------------AGTATAGTTTATTTGGCTGTGCGGCCT------TTT-------TCTGAATTAATTTTAATG--TCTTCAGCAGAA---GAGCA--ACC
droAna3 scaffold_13337:11947731-11948046 - TGCATGCGAGCCCGGCAGCCGCAGCACTATGAAATTCACCCGTGAAACGTGTTAGTT-TGGCCG-CAAAGGCACTTTAAAC--CT-ACTATTTCTTATTAGCGTGTTGA-----AAAA-GA-GGGAAACAT---------ATAATGCGAGAGGCACAATACGTGTG--AGGCGTAAGTGCGAGCGGGATGACGCTTAACGTGT----ACTAGCAGCGGGCTATATATACATATTAAT--------ATAT--------------------------------------ATTATTTGTATGA--------GTGTAGGA---------T----------AAAGAATTGTTCAAAA------------------------ATGTTAGTTT--TTAAATCTGCCATTC--------T-------AGTGAATTAGCTTTTAAG--TATTTCGCCGAT---AGGCA--GCC
droBip1 scf7180000396589:2038469-2038785 + TGCATGCGAGCCCGGCAGCCGCAGCACTATGAAATTCACCCGTGAATCGTGTTAGTT-TGGCCG-CAAAGGCACTTTTAAC--TT-ACTATTTCTTATTAGCGTGTTGA-----AAAAAGA-GGGAAACACA---------TAATGCGAGAGGCACAATACGTGTG--AAGCGTAAGTGCGAGCGGGATAACGCTTAACGTGT----ACTAGCAGCGGGCTATATATACATATTTAT--------ATAT--------------------------------------ATTATTTGTATGA--------GTGTAGGA---------T----------AAAGAATTGTTCAGAA------------------------ATGTTAGTTT--TTGAATCTGCCATTC--------T-------GGTGAATTAGTTTTAAAT--TAGTTAGCCGAT---AGGGT--GCC
dp5 XR_group8:2443193-2443534 - AGTATGCGATGGCGGCAATCGCATCACTATGAAATTTAAATGTGAAACGTGTTAGTT-GAGTTCTAAAATACAGTTTTCGT--AT-ATGATTTCTTATTAGCGTGTAGG-----AGAA-GA-GGAAAACAGA-------TACAATGTGAGAAGCAAAATACGTGCA--GAGCCTAAGAGCAAGCGAGATGTCGCTAAACGTGT----ACTGGCAGCGGTCTATATATACATA----TGCACATGAATAT--------------------------------------AGTATTTGTACCA--------GTGTAGGA---GAAGTAC----------AGGGAATTGTACAAAA------------------------AATATAGTTTGTTTGCTTGTGGCGTAC------GTTTTTTTCTTTTAAATTACTTTCCAAGTGTCTATAGCTAAA---AGACG--AAC
droPer2 scaffold_24:610927-611268 + AGTATGCGATGGCGGCAATCGCATCACTATGAAATTTAAATGTGAAACGTGTTAGTT-GAGTTCTAAAATACAGTTTTCGT--AT-ATGATTTCTTATTAGCGTGTAGG-----AGAA-GA-GGAAAACAGA-------TACAATGTGAGAAGCAAAATACGTGCA--GAGCCTAAGAGCAAGCGAGATGTCGCTAAACGTGT----ACTGGCAGCGGTCTATATATACATA----TGCACATGAATAT--------------------------------------AGTATTTGTACCA--------GTGTAGGA---GAAGTAC----------AGGGAATTGTACAAAA------------------------AATATAGTTTGTTTGCTTGTGGCGTAC------GTTTTTTTCTTTTAAATTACTTTCCAAGTGTCTATAGCTAAA---AGACG--AAC
droWil2 scf2_1100000004511:6279363-6279719 - AGTGAGCAGATGCGGCCGTCGCATTACTATGAAATTGAACTATAAAATGTGTTAGTA-ATGACA-AAAAAGCGGTTTAAAA--TT-CGGATTTCTTATTAGCGTGTTGA-----GGGAAAA-GGAAAACACATAAAAAATACAATGCGAGAGGCAAGATACATACGTGTAGAGTAAGTGCGAGCGAGATGTCACTAACAGCG-----ACAAAC----GTATATGTATTTA------T--------ATATATGTATATTTATATATATAGAGATATGTATGTACATGTCTAATGTAAAAGA--------GTGTGCGA---GAGGTAA----------AAAGAATTGTACCAAA------------------------ATTATAGTTT---TGCTTTAGTCAAA-AGATATAAG-----------TACA--------A-----CTTAAACGACAAGCGGTGTTCCT
droVir3 scaffold_13049:23095710-23096045 + TGTTCTCAAGTGCAGCTTACGCAATATCCTAAAATGTAATGGTGAAACGTGTTAGTTATAGCTT-AAAATGTAGTTTTAAAATTT------ATCTTATTAGCGTGTTGG-----TAAAAAT-GGAAAACACA-------TAGGACGTGAAAGGTAAAATGCGTACG--AAGCGTTAGTGTAAGCGAGATGCCATTAAA-GTGT----TGTAGCAGCGGTCTAAATACATACA----T--------ACAT-TGTATATTTTTAAGC------GTG---------------TGTTTGTGTGT--------GACTACGAAACGAGGTACAAAATGTAAAGAAGAATTGTACAAATGT-----------------------AGTTAATTT--TTTTTTTTG--TCAC------ATA-------GTTGTACTTA------------TTTGAA--CA---ATGTG--ATT
droMoj3 scaffold_6680:17707161-17707504 + TGTTTTCCAGTGCCACTTACGCAATGCACTAAAATGTAATGGTGAAACGTGTTAGTTCTAGCTT-AAAATGTAGTTTTAAAATTT------ATCTTATTAGCGTGTTGG-----TAAA-GA-TGAAAA-ACA-------TAGGACGTGAAAGGTAAAATGCGCATA--AAACATTAGAGCAAGCGAGATGCCATTAAA-GTGT----TGTAGCAGCGGTCTATATACATACATACAT--------ACAT-TGTATATTTTTAAGC------GT---------------GTGATTGTGTGC--------GAGTACGAAACGAGGTACAAAATGTAAAGAGGAATTGTACAAATGTAGTTACAAATATTTTTGATCAAACTATAGTTTAATT----------------------------------------------T--TTTTTTGCCATT---GTGCA--TTT
droGri2 scaffold_15110:18363937-18364299 + TGCGCTCAACTTCTGCAAACGTAATGCACTAAAATATGATGGTGAAACGTGTTAGTAATTGCTT-AAAATGTAGTTTTAAAATTT------GTCTTATTAGCGTGTTGG-----TAAA-GATGAAAAACACA-------TAGGACGTGAAAGGTAAAATGCGTGCG--AAGCGTAAGTGTGAGCGAGATGCCATTAAA-GTGTTGGATGTAGCAGCGGTCTATATACATACT----T--------ACAT-TGTATATTTTTAAGC------GTATGTTTGTGTGTG---AGTGT--GAGTGTGTGCGTGAGTACGAAGCGAGGCACAAAATGTAATGAAGAATTGTACAAATCT-----------------------AGTTATTTT--TTTTTTTTGGTATGCTGGTTTGTT-----------TTTTTCTTTCAT-------------ACA---AAGTG--TAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACGTGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATT-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATAT--AT--------ATAT--------------------------------------ATTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AACTAATTCTACAAAA------------------------AGTATAGTTTACTTGGCTGTGTGGTTC------GAT-------TCTGAATTAATTTCATAG--TCTTCGGCAGTA---AGGTG--TCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGTA...........................................................................................................................................21111.0011000000000000011000
.......................................................................................................................................................................................................................................................................................................TGTGA--------GTGTAGGA---GAGGTAT----------A...............................................................................................................................2119.00900000000000018000
.........................................................................................................................................................................................................................................................................................................TGA--------GTGTAGGA---GAGGTAT----------AAC.............................................................................................................................2116.00600000000000006000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGT............................................................................................................................................2015.00500000000000005000
...................................................................................................................................................................................................................................................................................................TTTGTGTGA--------GTGTAGGA---GAGG.............................................................................................................................................2115.00500000000000014000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGTAA----------................................................................................................................................2214.00400000000000004000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGTT...........................................................................................................................................2113.00300000000000003000
...................................................................................................................................................................................................................................................................................................TTTGTGTGA--------GTGTAGGA---GAGGT............................................................................................................................................2213.00300000000000003000
.........................................................................................................................................................................................................................................................................................................TGA--------GTGTAGGA---GAGGTAT----------AA..............................................................................................................................2013.00300000000000003000
......................................................................................................................................................................................................................................................................................................GTGTGA--------GTGTAGGA---GAGGTAT----------................................................................................................................................2113.00300000000000003000
.................................................................................................TTAGCGTGTTGG-----AAAA-GA-GGA...................................................................................................................................................................................................................................................................................................................................................2113.00300000000000003000
.......................................................................................................................................................................................................................................................................................................................TAGGA---GAGGTAT----------AACTAATTA.......................................................................................................................2112.00200000000000002000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGTG...........................................................................................................................................2112.00200000000000002000
.......................................................................................................................................................................................................................................................................................................TGTGA--------GTGTAGGA---GAGGTA...........................................................................................................................................1912.00200000000000002000
.......................................................................................................................................................................................................................................................................................................TGTGA--------GTGTAGGA---GAGGTAT----------................................................................................................................................2012.00200000000000002000
...........................................GAAACGTGTTAGTT-TGGCTG-T..............................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
..............................................................................................................................................................................................................................................................................................................................................................................................GTTTACTTGGCTGTGTGGTTC------.......................................................2112.00200000010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................AGTTTACTTGGCTGTGTGGTTT------.......................................................2212.00200000000000002000
.....................................................................................................................................................................................................................................................................................................................TGTAGGA---GAGGTAT----------AACTAAT.........................................................................................................................2112.00200000000000002000
......CGAGCGCGGCAATCGCAGAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTCATAG--TCTTCGGCAG...............2112.00201000001000000000
.................................................................................................................................................................................................................TAGCCGCGGTCTATATATACA..........................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................................................................................................................................................................TGTGA--------GTGTAGGA---GAGGTAT----------T...............................................................................................................................2111.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTACTTGGCTGTGTGGA...............................................................2211.00100000000000001000
..........................................................................................................................................................................................................T----ACTAGCCGCGGTCTATATAA.............................................................................................................................................................................................................................................2111.00100000000000001000
......................................................................................................................................................................................................................................................................................................GTGTGA--------GTGTAGGA---GAGGTAA----------................................................................................................................................2111.00100000000000001000
.......................................................................................CGATTTCTTATTAGCGTGTTG....................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGA............................................................................................................................................2011.00100000000000001000
........................................................................................................................................................................................................................................................................................................GTGA--------GTGTAGGA---GAGGTAT----------AA..............................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................CTAAACGTGT----ACTAGCCGCG.......................................................................................................................................................................................................................................................2011.00100000000000001000
......................................................................................................................................................................................................................................................................................................GTGTGA--------GTGTAGGA---GAGGTAT----------TT..............................................................................................................................2311.00100000000000001000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGTAT----------................................................................................................................................2211.00100000000000001000
.....................................................................................................................................................................G--GAGCGTAGGTGGGA..........................................................................................................................................................................................................................................................................................1511.00100000001000000000
.................................................................................................................................................................GTGCG--GAGCGTAGGTGGGAG.........................................................................................................................................................................................................................................................................................2011.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................TAGGA---GAGGTAT----------AACTAATTC.......................................................................................................................2111.00100000000000001000
................................AATTCCCCTGTGAAACGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TACTTGGCTGTGTGGTTC------GAT-------.............................................2111.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................TTACTTGGCTGTGTGGTTT------.......................................................1911.00100000000000001000
..................................................................................................................................................................TGCG--GAGCGTAGGTGGGAGCGT......................................................................................................................................................................................................................................................................................2211.00100000000000001000
..............GCAATCGCAGAACTATGAAATTCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTACTTGGCTGTGTGGTTC------G......................................................2111.00100000001000000000
.......................................................................................................TGTTGG-----AAAA-GA-GGAAAACAC.............................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.........................................................................................................................................................................AGCGTAGGTGGGAGCGAGACG..................................................................................................................................................................................................................................................................................2111.00100000000000010000
................................AATTCCCCTGTGAAACGTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..........................................................................................TTTCTTATTAGCGTGTTGG-----A.............................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGG.............................................................................................................................................1911.00100000000000001000
...............................................................................................................................................................................................................................................................................................ATTATTTGTGTGA--------GTGTAGGA---GAGGT............................................................................................................................................2611.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG--TCTTCGGCAGTA---AGGTG--...2011.00100000000000001000
....................................................................................................................................................................................................................................................................................................TTGTGTGA--------GTGTAGGA---GAGGTT...........................................................................................................................................2211.00110000000000000000
...........................................................................................................................................................................CGTAGGTGGGAGCGAGACGA.................................................................................................................................................................................................................................................................................2011.00100000000000001000
.........................................................................................................................................................................................................................................................................................................TGA--------GTGTAGGA---GAGGTAT----------A...............................................................................................................................1911.00100000000000001000
.................................................................................................................................................................................................................................................................................................TATTTGTGTGA--------GTGTAGGA---GA...............................................................................................................................................2111.00100000001000000000
..................TCGCAGAACTATGAAATTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAATTAATTTCATAG--TCT......................2111.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTTCATAG--TCTTCGGCA................2111.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................TTACTTGGCTGTGTGGTTT------A......................................................2021.00200000000000002000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGTTC------GAT-------TCTGAATTAATT.................................2111.00100000000010000000
..................................................................................................................................................................TGCG--GAGCGTAGGTGGGATTA.......................................................................................................................................................................................................................................................................................2120.50100000000000001000
.........................................................................................................................................................................AGCGTAGGTGGGAGTA.......................................................................................................................................................................................................................................................................................16200.30600000006000000000
droSec2
AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACGTGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATT-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTATCCGCGGTCTATATATACATAG--AT--------ATAT--------------------------------------ATTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AACTAATTCTACAAAA-----------------------AAGTATAGTTTACTTGGCTGTGTGGTTC------GAT-------TCTGAATTAATTTCATAG--TCTTCGGCAGTA---AGGTG--TCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........GCGGCAATCGCAGAACTATGAAATTCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................GTTTACTTGGCTGTGTGGTTC------G......................................................2211.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTACTTGGCTGTGTGGTT..............................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTACTTGGCTGTGTGG................................................................2111.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGTGTGGTTC------GAT-------TCTG.........................................2111.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................AGTTTACTTGGCTGTGTGGTT..............................................................2111.0010010
.............................................................................................................................................................ATACGTGCG--GAGCGTAGGTG.............................................................................................................................................................................................................................................................................................2011.0010001
...................................................................................................................................................................GCG--GAGCGTAGGTGGGAGCGA......................................................................................................................................................................................................................................................................................2111.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG--TCTTCGGCAGTA---AGGTG--T..2111.0011000
.............................................................................................................................................................ATACGTGCG--GAGCGTAGGTGGGAGCGA......................................................................................................................................................................................................................................................................................2711.0010100
...ATGCGAGCGCGGCAATCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................AGCGTGTTGG-----AAAA-GA-GGAAAACACA-------.....................................................................................................................................................................................................................................................................................................................................2611.0010100
dm3
AGTATGCGAACGCGGCAATCGCAGAACTATGAAATTCCCCTGTGAAACATGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATG-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GATCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AATATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AACTAATTCTACAAAA-----------------------AAATATAGTTTACTTGGCTGAGTGGTTC------GCT-------TCTGAATTAGTTTCGCAC--TCTTCGGCAGTA---TGGTG--GCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................ATACGTGCG--GATCGTAGGTGG............................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130100000000000000000000000000000001000000000200000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTACTTGGCTGAGTGG................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................TTTGTGTGA--------GTGTAGGA---GAGG.............................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................TACGTGCG--GATCGTAGGTGGG...........................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000010000000000000010000000000000000000000000100000000010
.................................................................................................................................................................GTGCG--GATCGTAGGTGGGAGC........................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000020
............................................................................................................................................................................................................................................................................................................................................................................................TAGTTTACTTGGCTGAGTGGT...............................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000001100001000000000000
..................................................................................ATG-ACGATTTCTTATTAGCGT........................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000001000000000000
...............................................................................................................................................................ACGTGCG--GATCGTAGGTGGGA..........................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000030000000
................................................................................................................................................................................................................................................................................................................................................................................................TTACTTGGCTGAGTGGTTC------GC.....................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000100000000000
.....................................................................................................................................................GAGGCAAAATACGTGCG--GATC....................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
........................................................................................GATTTCTTATTAGCGTGTTGG-----..............................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................AATATAGTTTACTTGGCTGAGA..................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC--TCTTCGGCAGTA---TGGTG--G..2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................T--------------------------------------AATATTTGTGTGA--------GTGTAGG.....................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGGTGGGAGCGAGACGAC................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AGACGACGCTAAACGTGT----ACT..............................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................ATTTCTTATTAGCGTGTTGG-----A.............................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTACTTGGCTGAGTGGTTC------G......................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
................................................................................................ATTAGCGTGTTGG-----AAAA-GA-GG....................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................GGTGGGAGCGAGACGACGCTA............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................GCGTGTTGG-----AAAA-GA-GGAAAA................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAC--TCTTCGGCAGTA---TGGT......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000
.................................................................................................................................................GTGAGAGGCAAAATACGTGCG--........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TGTGTGA--------GTGTAGGA---GAGGTA...........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GTAGGTGGGAGCGAGACGACG...............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAC--TCTTCGGCAGTA---TG........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................TTATTAGCGTGTTGG-----AAAA-GA-......................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAACGCGGCAATCGCAGAACTATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TACGTGCG--GATCGTAGGTGG............................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGAACGCGGCAATCGCAGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AGCGTGTTGG-----AAAA-GA-GGAAAA................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.................................................................................................................................ACA-------CACATTGTGAGAGGC......................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TACTTGGCTGAGTGGTTC------GCT-------.............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000
...........................................................................................................................................................................CGTAGGTGGGAGCGAGACGAA................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TACTTGGCTGAGTGGTTC------GCT-------TCTGAA.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGGCAATCGCAGAACTATGAAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTTCTTATTAGCGTGTTGG-----..............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
............CGGCAATCGCAGAACTATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................AAA-GA-GGAAAACACA-------CACATTGT.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................AAACGTGT----ACTAGCCGCGGTC....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................A----T--------ATAT--------------------------------------AATATTTGTGTGA--------GT..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATTGTGAGAGGCAAAATACGTGT...........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................GAGACGACGCTAAACGTGT----.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................AGGTGGGAGCGAGACGACGCT.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........CGCGGCAATCGCAGAACTATGAAATTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CCCCTGTGAAACATGTTAGTT-......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTAGCGTGTTGG-----AAAA-GA-GGA...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CTTATTAGCGTGTTGG-----AAAA-GA-GGA...................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTTC------GCT-------TCTGAATTAGTTTCGC.............................2311.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TAGGTGGGAGCGAGACGACGCC.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AACATGTTAGTT-TGGCTG-TA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CG--GATCGTAGGTGGGAGCGAG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................ATCGTAGGTGGGAGCGAGACG..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....GCGAACGCGGCAATCGCAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..TATGCGAACGCGGCAATCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................TATTAGCGTGTTGG-----AAAA-GA-GG....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................................CGACGCTAAACGTGT----ACTAGC...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................G--GATCGTAGGTGGGAGCGAGA....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................TGTGA--------GTGTAGGA---GAGGTAT----------AAC.............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................T--------------------------------------AATATTTGTGTGA--------GTGTAGGA---.................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TATTAGCGTGTTGG-----AAAA-GA-G.....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATATAGTTTACTTGGCTGAG...................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATGAAATTCCCCTGTGAAACATG.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TACGTGCG--GATCGTAGGTGGA...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................AT--------------------------------------AATATTTGTGTGA--------GTGTAG......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AAAACACA-------CACATTGTGAGAGG.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
AGTATGCGAACGCGGCAATCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTCGCAC--TCTTCGGCA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AGGCAAAATACGTGCG--GATCG...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................AATACGTGCG--GATCGTAGGTGA............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATATTTGTGTGA--------GTGTAGGA---GA...............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAT--------------------------------------AATATTTGTGTGA--------GTGTAG......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TGCG--GATCGTAGGTGGGAGC........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................GTTAGTT-TGGCTG-TAAAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTTTACTTGGCTGAGTGGTT..............................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AACGTGT----ACTAGCCGCGGTCTA..................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATAT--------------------------------------AATATTTGTGTGA--------GTGTAG......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CTGAGTGGTTC------GCT-------TCTGAAT......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTATGCGAACGCGGCAATCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....TGCGAACGCGGCAATCGCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................CGATTTCTTATTAGCGTGTTG....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CTGAGTGGTTC------GCT-------TCTGA........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAATTAGTTTCGCAC--TCT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CAAAATACGTGCG--GATCGTAGGTGG............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AGTTTACTTGGCTGAGTGGTTC------GC.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................A--------GTGTAGGA---GAGGTAT----------AACTA...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CGAGACGACGCTAAACGTGT----T................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATTTGTGTGA--------GTGTAGGA---GA...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................................................TAGCGTGTTGG-----AAAA-GA-......................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATAT--------------------------------------AATATTTGTGTGA--------GTGT........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................T-------TCTGAATTAGTTTCGCAC--T........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACGCGGCAATCGCAGAACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGCTGAGTGGTTC------G......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTGTGA--------GTGTAGGA---GAG..............................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CGCTAAACGTGT----ACTAGCCGC........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................A----T--------ATAT--------------------------------------AATATTTGTGTGA--------GTGT........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................AATTCCCCTGTGAAACATGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ATCGTAGGTGGGAGCGAGA....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTACTTGGCTGAGTGGTTC------GC.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........GCGGCAATCGCAGAACTATGAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TGA--------GTGTAGGA---GAGGTAT----------AAC.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................GCTAAACGTGT----ACTAGCCGCG.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...ATGCGAACGCGGCAATCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATACGTGCG--GATCGTAGG...............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AGTTTACTTGGCTGAGTGGT...............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AATATTTGTGTGA--------GTGTAGGA---.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................GGTGGGAGCGAGACGACGCT.............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................CTGAGTGGTTC------GCT-------TCTG.........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AAAA-GA-GGAAAACACA-------CACAT................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TGGGAGCGAGACGACGCTAAACG........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CG--GATCGTAGGTGGGAGCGA......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................AT--------------------------------------AATATTTGTGTGA--------GTG.........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................ATTCCCCTGTGAAACATGTTAGT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTACCCCGTGAAACGTGTTAGTT-TGGCTG-TTAAAGCACTTTTAAAAATG-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGGCAAAATACGTGCG--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATAT--AT--------ATAT--------------------------------------AATATTTGTGTGA--------GTGTAGGA---GAAGTAT----------AACTAATTCTACAAAA-----------------------AAGTATAGTTTACTTGACTGTGTGGTTC------GAT-------TCTGAATTAATTTCATAG--TCTTCGGCCGAT---AGATG--GCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................TGT----ACTAGCCGCGGTCTATAT...............................................................................................................................................................................................................................................2111.0010010000
.........................................................................................ATTTCTTATTAGCGTGTTGG-----A.............................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..........................................................................................TTTCTTATTAGCGTGTTGG-----AAAA-GA-GG....................................................................................................................................................................................................................................................................................................................................................2711.0011000000
droYak3
AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TGGCTG-TAAAAGCACTTTTAAAAATG-AAGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACATTGTGAGAGACAAAATACGAGCA--GAGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATATATAT--------ATAT--------------------------------------AATATTTGTGTGA--------GTGTAAGA---GAGGTAT----------AACTAATTCTACAAAA-----------------------AAGTATAGTTTATTTGACTGTGTGGTTC------GAT-------TCTGAATAAATTTCATAG--TCTTTAGCCGAA---AGATG--GCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................CGTGTTAGTT-TGGCTG-TAAAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................................GATTTCTTATTAGCGTGTTGG-----A.............................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................CAAAATACGAGCA--GAGCGTAGGTGGGA..........................................................................................................................................................................................................................................................................................2711.00100000010000
............................ATGAAATTCCCCCGTGAAACGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................GAGACAAAATACGAGCA--GAGC....................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
AGTTTGCGAGCGCGGCAATCGCAGAACTATGAAATTTTCCTGAGAAATGTGTTAGTT-TGGCTG-AAAAAGAACTTTTAAA--TTGACGA----CTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------TACAATGTGAGAGGCAAAATATGTGAA--GACCGTAGGTGGGAACGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCCATATATACATACATAT--------ATAT--------------------------------------AGTATTTGTGTTA--------GTGTAGG----GAGATAT----------AAAGAATTGTACAAAA------------------------AATATAGTTTACTTTACTTTCCGTTCC------GTT-------TGTGAATTAATTTTATAA--TTTTTGGCCGAT---AGGTG--ACCSizeHit CountTotal NormTotal
No Reads
droBia1
AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TGGCTG-CAAGAGCACTTTTAAT--TTGACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGCA--GGGCGTAGGTGGGAGCGAGATGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---AAGGTAT----------AAAGAATTGTACAAAA------------------------AGTATAGTTTACTTGACTGTGCGCTCA------ATT-------TCTGAATTAATTTCATAG--TCTTTGGCCGAA---AGGTG--GCCSizeHit CountTotal NormTotal
No Reads
droTak1
AGTATGCGAGCACGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TGGCTG-CAAAAGCACTTTTAAT--TTGGCGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGCA--GGGCGTAGGTGGGAGCGAGATGACGCTAAACGTGC----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AAAGAATTGTTCAAAA------------------------AGTATAGTTTACTTGGCTGTGCGCTCC------GAT-------TCTGAATTAATTGTATAG--TCTTTGGTCGAA---AGGCG--GCCSizeHit CountTotal NormTotal
No Reads
droEle1
AGTATGCGAACGCGCCAATCGCAGAACTATGAAATTCCACCGTGAAACGTGTTAGTTTTGGCTG-CAAAAGCACTTTTAAC--TT-ACGTTTTCCTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGCG--GTGCGTAGGTGGGAGCGAGACGACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTCGTGTGA--------GTGTAGGA---GAGGTAT----------AAAGAATTGTACAAAA------------------------AGTATAGTTTACTTGACTTTGCGCTCC------GTT-------TCGGAAATAATTTCCTAC--TCTTAGGCCAAA---AGGCG--CCCSizeHit CountTotal NormTotal
No Reads
droRho1
AGTATGCGAGCGCGGCAATCGCAGAACTATGAAATTCCCCCGTGAAACGTGTTAGTT-TAGCTG-CAAAAGCACTTTTAAT--TT-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGGAAAATACGTGCG--GAGCGTAGGTAGGAGTGAGACAACGCTAAACGTGT----ACTAGCCGCGGTCTATATATACATA----T--------ATAT--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---GAGATAT----------AAAGAATTGTACAAAA------------------------AGTATAGTTTACTTGACTGTGCGTTCC------GTT-------TCTGAAATAATTTCCTAG--TCTTCGTACGAA---ACTTG--GCCSizeHit CountTotal NormTotal
No Reads
droFic1
AGTATGCGAACGCGGCAATCGCAGAACTATGAAATTCCTCCGTGAAACGTGTTAGTT-TGTCTG-CAAAAGTGCTTTGAAT--TC-ACGATTTCTTATTAGCGTGTTGG-----AAAA-GA-GGAAAACACA-------CACAATGTGAGAGGCAAAATACGTGGG--GAGCGTATGTTGGAGCGAGATGACGCTAAACGTCT----ACTAGCCGCGGTCCATATATACATA----T--------ATAT--------------------------------------AGTATTTGCATGA--------GTGTAGGA---GAGGTAT----------AAAGAATTGTACAAAA------------------------AATATAGTTTACTTGACTATGTCGTGC------ATT-------TTTAAGTTAATGTCATAG--GCTTCGGCCAAG---AGGCG--ACCSizeHit CountTotal NormTotal
No Reads
droKik1
AGCATGCGAGCCCAGCAATCGCAGCACTATGAAATTTTCCCGAGAAACGTGTTAGTT-TGTCTG-CAAATTCACTTTTAAT--TT-ACGATTTCTTATTAGCGTGTTGGGGGGAAAAA-GA-GGAAAACAC---------ACAATGTGAGAGGCAAAATACGTGCG--GAGCGCAAGTGTGAGCGAGATGACGCTAAACGTGT----ACTAGCAGCGGTCTATATGTA--------T--------ATGA--------------------------------------AGTATTTGTGTGA--------GTGTAGGA---GAGGTAT----------AAGAAATTGTACAAAA------------------------AGTATAGTTTATTTGGCTGTGCGGCCT------TTT-------TCTGAATTAATTTTAATG--TCTTCAGCAGAA---GAGCA--ACCSizeHit CountTotal NormTotal
No Reads
droAna3
TGCATGCGAGCCCGGCAGCCGCAGCACTATGAAATTCACCCGTGAAACGTGTTAGTT-TGGCCG-CAAAGGCACTTTAAAC--CT-ACTATTTCTTATTAGCGTGTTGA-----AAAA-GA-GGGAAACAT---------ATAATGCGAGAGGCACAATACGTGTG--AGGCGTAAGTGCGAGCGGGATGACGCTTAACGTGT----ACTAGCAGCGGGCTATATATACATATTAAT--------ATAT--------------------------------------ATTATTTGTATGA--------GTGTAGGA---------T----------AAAGAATTGTTCAAAA------------------------ATGTTAGTTT--TTAAATCTGCCATTC--------T-------AGTGAATTAGCTTTTAAG--TATTTCGCCGAT---AGGCA--GCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................AGCACTATGAAATTCACCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
......................................................................................................................................................AGGCACAATACGTGTG--AGGCGTTT................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................AGGCACAATACGTGTG--AGGC....................................................................................................................................................................................................................................................................................................2011.001000001
.............................................................................................................................................................................................GACGCTTAACGTGT----ACTAGCAGCGGGCT...................................................................................................................................................................................................................................................2811.001001000
..........................................................................................................................................................................................GATGACGCTTAACGTGT----ACT..............................................................................................................................................................................................................................................................2011.001000010
..........................................TGAAACGTGTTAGTT-TGGCCG-...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................G--AGGCGTAAGTGCGAGCGGGA....................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................G--AGGCGTAAGTGCGAGCG.......................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................TAGCGTGTTGA-----AAAA-GA-GG....................................................................................................................................................................................................................................................................................................................................................1911.001000010
..............................................................................................................................................................................AAGTGCGAGCGGGATGACG...............................................................................................................................................................................................................................................................................1911.001000001
...............................................................................................................................................................ACGTGTG--AGGCGTAAGTGCG...........................................................................................................................................................................................................................................................................................2011.001000001
..................................................GTTAGTT-TGGCCG-CAAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droBip1
TGCATGCGAGCCCGGCAGCCGCAGCACTATGAAATTCACCCGTGAATCGTGTTAGTT-TGGCCG-CAAAGGCACTTTTAAC--TT-ACTATTTCTTATTAGCGTGTTGA-----AAAAAGA-GGGAAACACA---------TAATGCGAGAGGCACAATACGTGTG--AAGCGTAAGTGCGAGCGGGATAACGCTTAACGTGT----ACTAGCAGCGGGCTATATATACATATTTAT--------ATAT--------------------------------------ATTATTTGTATGA--------GTGTAGGA---------T----------AAAGAATTGTTCAGAA------------------------ATGTTAGTTT--TTGAATCTGCCATTC--------T-------GGTGAATTAGTTTTAAAT--TAGTTAGCCGAT---AGGGT--GCCSizeHit CountTotal NormTotal
No Reads
dp5
AGTATGCGATGGCGGCAATCGCATCACTATGAAATTTAAATGTGAAACGTGTTAGTT-GAGTTCTAAAATACAGTTTTCGT--AT-ATGATTTCTTATTAGCGTGTAGG-----AGAA-GA-GGAAAACAGA-------TACAATGTGAGAAGCAAAATACGTGCA--GAGCCTAAGAGCAAGCGAGATGTCGCTAAACGTGT----ACTGGCAGCGGTCTATATATACATA----TGCACATGAATAT--------------------------------------AGTATTTGTACCA--------GTGTAGGA---GAAGTAC----------AGGGAATTGTACAAAA------------------------AATATAGTTTGTTTGCTTGTGGCGTAC------GTTTTTTTCTTTTAAATTACTTTCCAAGTGTCTATAGCTAAA---AGACG--AACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................AGATGTCGCTAAACGTGT----ACT..............................................................................................................................................................................................................................................................2113.0030300000000
.................................................................................................TTAGCGTGTAGG-----AGAA-GA-GG....................................................................................................................................................................................................................................................................................................................................................2012.0020000001010
.................................................................................................TTAGCGTGTAGG-----AGAA-GA-GGA...................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................ACTGGCAGCGGTCTATATATAC...........................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................AATAT--------------------------------------AGTATTTGTACCA--------GTG.........................................................................................................................................................2111.0010100000000
..........................................................................TTTTCGT--AT-ATGATTTCTTG...............................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................CTAAACGTGT----ACTGGCAGCG.......................................................................................................................................................................................................................................................2011.0010000001000
................................AATTTAAATGTGAAACGTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................TAAGAGCAAGCGAGATGTCGC..............................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................TAAGAGCAAGCGAGATGTCGCT.............................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................AACGTGT----ACTGGCAGCGGTCT...................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................ATTTGTACCA--------GTGTAGGA---GAA..............................................................................................................................................2111.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCAAGTGTCTATAGCTAA..............2111.0010100000000
......................................................................................................................................................AAGCAAAATACGTGCA--GAGC....................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................TGTAGGA---GAAGTAC----------AGGGAAT.........................................................................................................................2111.0010100000000
droPer2
AGTATGCGATGGCGGCAATCGCATCACTATGAAATTTAAATGTGAAACGTGTTAGTT-GAGTTCTAAAATACAGTTTTCGT--AT-ATGATTTCTTATTAGCGTGTAGG-----AGAA-GA-GGAAAACAGA-------TACAATGTGAGAAGCAAAATACGTGCA--GAGCCTAAGAGCAAGCGAGATGTCGCTAAACGTGT----ACTGGCAGCGGTCTATATATACATA----TGCACATGAATAT--------------------------------------AGTATTTGTACCA--------GTGTAGGA---GAAGTAC----------AGGGAATTGTACAAAA------------------------AATATAGTTTGTTTGCTTGTGGCGTAC------GTTTTTTTCTTTTAAATTACTTTCCAAGTGTCTATAGCTAAA---AGACG--AACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................AATACGTGCA--GAGCCTAAGAGCAAGCGA......................................................................................................................................................................................................................................................................................2813.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGCTTGTGGCGTAC------GTT....................................................2111.001001000
.....................................................................................................................................................................................................................................................................................................................TGTAGGA---GAAGTAC----------AGGGAA..........................................................................................................................2011.001000001
droWil2
AGTGAGCAGATGCGGCCGTCGCATTACTATGAAATTGAACTATAAAATGTGTTAGTA-ATGACA-AAAAAGCGGTTTAAAA--TT-CGGATTTCTTATTAGCGTGTTGA-----GGGAAAA-GGAAAACACATAAAAAATACAATGCGAGAGGCAAGATACATACGTGTAGAGTAAGTGCGAGCGAGATGTCACTAACAGCG-----ACAAAC----GTATATGTATTTA------T--------ATATATGTATATTTATATATATAGAGATATGTATGTACATGTCTAATGTAAAAGA--------GTGTGCGA---GAGGTAA----------AAAGAATTGTACCAAA------------------------ATTATAGTTT---TGCTTTAGTCAAA-AGATATAAG-----------TACA--------A-----CTTAAACGACAAGCGGTGTTCCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................ATTAGCGTGTTGA-----GGGAAAA-G.....................................................................................................................................................................................................................................................................................................................................................2112.00200200
.....................................................................................................................................................................GTGTAGAGTAAGTGCGAGCGA......................................................................................................................................................................................................................................................................................2112.00202000
....................................................................................................................................................AGAGGCAAGATACATACGTGT.......................................................................................................................................................................................................................................................................................................2112.00200002
..............................................................................................TTATTAGCGTGTTGA-----GGGAAA........................................................................................................................................................................................................................................................................................................................................................2112.00200002
.........................................................................................ATTTCTTATTAGCGTGTTGA-----GG............................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................TGTTGA-----GGGAAAA-GGAAA.................................................................................................................................................................................................................................................................................................................................................1811.00100100
.........................................................................................................................................AATACAATGCGAGAGGCAAGATA................................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................AGCGTGTTGA-----GGGAAAA-GG....................................................................................................................................................................................................................................................................................................................................................1911.00100100
...............................................................................................................................................................................................................................................................................................CTAATGTAAAAGA--------GTGTGCGA---.................................................................................................................................................2111.00100010
......................................................................................................................................AAAAATACAATGCGAGAGGCA.....................................................................................................................................................................................................................................................................................................................2111.00101000
..TGAGCAGATGCGGCCGTCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................................................................................................TAGCGTGTTGA-----GGGAAAA-G.....................................................................................................................................................................................................................................................................................................................................................1911.00100100
.................................................................................................TTAGCGTGTTGA-----GGGAAAA-GGT...................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................TAGCGTGTTGA-----GGGAAAA-GGA...................................................................................................................................................................................................................................................................................................................................................2111.00100010
............................................................................................................................................................GATACATACGTGTAGAGTAAGTGCGAGC........................................................................................................................................................................................................................................................................................2811.00100100
......................................................GTA-ATGACA-AAAAAGCGGTTT...................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
....................................GAACTATAAAATGTGTTAGTA-AT....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................AGTTT---TGCTTTAGTCAAA-AG...........................................................2020.50101000
.....................................................................................................................................................................................................................................................................................................................TGTGCGA---GAGGTAA----------AAAGAAT.........................................................................................................................2120.50101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................A--------A-----CTTAAACGACAAGCGGTGT....2120.50100100
...........................................................................................................................................................................................................................................................................................................A--------GTGTGCGA---GAGGTAA----------AAAG............................................................................................................................2020.50100010
droVir3
TGTTCTCAAGTGCAGCTTACGCAATATCCTAAAATGTAATGGTGAAACGTGTTAGTTATAGCTT-AAAATGTAGTTTTAAAATTT------ATCTTATTAGCGTGTTGG-----TAAAAAT-GGAAAACACA-------TAGGACGTGAAAGGTAAAATGCGTACG--AAGCGTTAGTGTAAGCGAGATGCCATTAAA-GTGT----TGTAGCAGCGGTCTAAATACATACA----T--------ACAT-TGTATATTTTTAAGC------GTG---------------TGTTTGTGTGT--------GACTACGAAACGAGGTACAAAATGTAAAGAAGAATTGTACAAATGT-----------------------AGTTAATTT--TTTTTTTTG--TCAC------ATA-------GTTGTACTTA------------TTTGAA--CA---ATGTG--ATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................AAATGTAATGGTGAAACGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000002000000000000000000000000000000000000000000000000000000
..............................................................................................TTATTAGCGTGTTGG-----TAAAAAT-A.....................................................................................................................................................................................................................................................................................................................................................2312.002000002000000000000000000000000000000000000000000000000000000000
.............................TAAAATGTAATGGTGAAACGTGTTAGT........................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000001010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GT--------GACTACGAAACGAGGTA...........................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................GTTGG-----TAAAAAT-GGAAAACACA-------TAGGAC...............................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
........................TATCCTAAAATGTAATGGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
............................................AAACGTGTTAGTTATAGCTT-A..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................AAT-GGAAAACACA-------TAGGACGT.............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................GTTGG-----TAAAAAT-GGAAAACAC.............................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CGTTAGTGTAAGCGAGATGCCAT..............................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................AAAAAT-GGAAAACACA-------TAGGA................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGTATATTTTTAAGC------GTG---------------TGT............................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
..........................................TGAAACGTGTTAGTTATAGCTC-...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.GTTCTCAAGTGCAGCTTACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................AAAATTT------ATCTTATTAGCGTG.......................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................T------ATCTTATTAGCGTGTTGG-----TA............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................G--AAGCGTTAGTGTAAGCGAGA....................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................TAGCGTGTTGG-----TAAAAAT-GG....................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
..............................................................................AAAATTT------ATCTTATTAGCGTGTTG....................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................AGGACGTGAAAGGTAAAATGC...............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......AAGTGCAGCTTACGCAATATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................GGTAAAATGCGTACG--AAGCGT..................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..TTCTCAAGTGCAGCTTACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................ATGCGTACG--AAGCGTTAGTG.............................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................CA-------TAGGACGTGAAAGGTAAAATGC...............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TATATTTTTAAGC------GTG---------------TGTTC..........................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
........AGTGCAGCTTACGCAATATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................ATTAAA-GTGT----TGTAGCAGCGG......................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTG--TCAC------ATA-------GTTGTACTTA------------.......................2111.001000100000000000000000000000000000000000000000000000000000000000
...............................AAATGTAATGGTGAAACGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................GCCATTAAA-GTGT----TGTAGCAGCG.......................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................TTATTAGCGTGTTGG-----TAAAA.........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
....................................................................ATGTAGTTTTAAAATTT------ATCTTATT.............................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
TGTTTTCCAGTGCCACTTACGCAATGCACTAAAATGTAATGGTGAAACGTGTTAGTTCTAGCTT-AAAATGTAGTTTTAAAATTT------ATCTTATTAGCGTGTTGG-----TAAA-GA-TGAAAA-ACA-------TAGGACGTGAAAGGTAAAATGCGCATA--AAACATTAGAGCAAGCGAGATGCCATTAAA-GTGT----TGTAGCAGCGGTCTATATACATACATACAT--------ACAT-TGTATATTTTTAAGC------GT---------------GTGATTGTGTGC--------GAGTACGAAACGAGGTACAAAATGTAAAGAGGAATTGTACAAATGTAGTTACAAATATTTTTGATCAAACTATAGTTTAATT----------------------------------------------T--TTTTTTGCCATT---GTGCA--TTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................AAACATTAGAGCAAGCGAGATGCCATT.............................................................................................................................................................................................................................................................................2711.001100000
....................................................................................T------ATCTTATTAGCGTGTTGG-----TA............................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............CTTACGCAATGCACTAAAATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
TGCGCTCAACTTCTGCAAACGTAATGCACTAAAATATGATGGTGAAACGTGTTAGTAATTGCTT-AAAATGTAGTTTTAAAATTT------GTCTTATTAGCGTGTTGG-----TAAA-GATGAAAAACACA-------TAGGACGTGAAAGGTAAAATGCGTGCG--AAGCGTAAGTGTGAGCGAGATGCCATTAAA-GTGTTGGATGTAGCAGCGGTCTATATACATACT----T--------ACAT-TGTATATTTTTAAGC------GTATGTTTGTGTGTG---AGTGT--GAGTGTGTGCGTGAGTACGAAGCGAGGCACAAAATGTAATGAAGAATTGTACAAATCT-----------------------AGTTATTTT--TTTTTTTTGGTATGCTGGTTTGTT-----------TTTTTCTTTCAT-------------ACA---AAGTG--TACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................T--GAGTGTGTGCGTGAGTACGA....................................................................................................................................................2111.00101
....................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTGGTATGCTGGTTTG......................................................2211.00101
.............................................................................TAAAATTT------GTCTTATTAGCGT........................................................................................................................................................................................................................................................................................................................................................................2111.00110
.....................................................................................................................................................................................................................................................................AAGC------GTATGTTTGTGTGTG---AG.............................................................................................................................................................................2111.00101
................................................................................................ATTAGCGTGTTGG-----TAAA-GATG.....................................................................................................................................................................................................................................................................................................................................................2111.00101
.................................................................................................................................................................................................................................................................................ATGTTTGTGTGTG---AGTGT--G.......................................................................................................................................................................1920.50101
.....................................................................................................................................................................................................................................................................................TTGTGTGTG---AGTGT--GAGTGTG.................................................................................................................................................................2140.25101

Generated: 05/18/2015 at 06:53 PM