ID:dsi_27014 |
Coordinate:2r:4926301-4926379 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_4924263_4926300_+]; CDS [2r_4924263_4926300_+]; CDS [2r_4926380_4926766_+]; exon [2r_4926380_4926766_+]; intron [2r_4926301_4926379_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------################################################## TCCGACGAGGCTAACTGTGATAATGTCTCTTGCGGACCCAATGATTTCCAGTGAGTGTGCTTTTAAGCTGATTTATTTGTAATTAGCGAAAAGAAATGTCATCAATTAACGAGTGCGTTTCCTTTTTAGATGCGATTCGGGTCGGTGTATTCCACTGGCTTGGCGCTGTGACGATGACC **************************************************................(((((((.......)))))))((((((((((((..((.......))..)))))).))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR618934 dsim w501 ovaries |
O001 Testis |
O002 Head |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
M053 female body |
SRR553485 Chicharo_3 day-old ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............AACTGTGATAATGTCTCC..................................................................................................................................................... | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TCCGACGAGGCTAACTGTGATAAT........................................................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................CTTGGCGCTGTGACGATGACC | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................TGCGATTCGGGTCGGTGTATTCCAC........................ | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............TGTGATAATGTCTCTTGCGGACCCAA.......................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................TCGGGTCGGTGTATTCCA......................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................TTCGGGTCGGTGTAGACC.......................... | 18 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................ATTAACGAGTGCGTTC........................................................... | 16 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................CACCATTTAAAGAGTGCGT............................................................. | 19 | 3 | 20 | 0.20 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 |
| ...............................................................................................................AGTGCGGTTTGTTTTTAGAT................................................ | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........................................................................................................................................................ACTGGCTTGTGGCTGTAAC....... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
|
AGGCTGCTCCGATTGACACTATTACAGAGAACGCCTGGGTTACTAAAGGTCACTCACACGAAAATTCGACTAAATAAACATTAATCGCTTTTCTTTACAGTAGTTAATTGCTCACGCAAAGGAAAAATCTACGCTAAGCCCAGCCACATAAGGTGACCGAACCGCGACACTGCTACTGG
**************************************************................(((((((.......)))))))((((((((((((..((.......))..)))))).))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M053 female body |
|---|---|---|---|---|---|---|
| ....................................................................................TCACTTTTCCGTACAGTAG............................................................................ | 19 | 3 | 18 | 0.06 | 1 | 1 |
Generated: 04/23/2015 at 08:32 AM