ID:

dsi_26983

 Coordinate:

2r:3138648-3138935 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.7 -34.3 -34.1

Flybase annnotation

exon [2r_3138936_3139273_+]; CDS [2r_3138936_3139273_+]; exon [2r_3138522_3138647_+]; CDS [2r_3138522_3138647_+]; intron [2r_3138648_3138935_+]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGGATAGCAGTCAGAGCCATTACACACTGGAACTATGCATCCATTTCCAGGTAAGGCCTCACCACCAATCACATCAAATGCATTTCGAAACCATTGATTGCAGTTGATTGCACAGCACGAAATTTTGTTGAATGTCACGATCCCAGGAACTCTCCTCTTCATAAACCTTCAGTTAACTTATGTCTAAAAACCATAACATCATAGCTTGAGAAGTTTTAATAAATAAAAATGTATGATCCATAATGTCAGAGAGCTTTCTACTCCGTTAGTAAAGTTCTTTGACTATCAGCTGCGTTTCTATTTAAGGTCTCATATTTACTCTGCTTTTATACTTGCAGGGGACGCACAGCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATC
**************************************************************************************************************************************....((((..((((....)))).....((((.((((..((((.(((((.................))))).)))))))).)))).((((((.(((((((((((.......((((((((((((((((......))).))))))))))))).))))..))))))).)))))).))))..................************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
........................................................................................................................................................................................................................................................................................................................................................CACAGCAATTTTGAACCGCCT....................... 21 0 1 2.00 2 0 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CGCACAGCAATTTTGAACCGCCT....................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................................................................................TCACGATCCCAGGAACTCTCC......................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................TTTGAACCGCCTGCAGGA................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CACAGCAATTTTGAACCGCCTG...................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................ACAGCAATTTTGAACCGCCTGC..................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................ATCCAGGGGACGCACAGCAATTT................................. 23 2 1 1.00 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................................................................TTTTGAACCGCCTGCAGGA................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TTTAAGGTCTCATATTTACTCTGCTTT............................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CACAGCAATTTTGAACCGCC........................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................TCAATTTACAGGTAAGACCTC........................................................................................................................................................................................................................................................................................................................................ 21 3 2 0.50 1 0 0 1 0 0 0 0 0
.......................AGACTGGAACTAAGCATC........................................................................................................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 1 0
...............................................................................................GTTTGCAGTTGATCGCA.................................................................................................................................................................................................................................................................................... 17 2 20 0.20 4 0 0 4 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAATTTTGAACCGCCGGA..................... 20 3 6 0.17 1 0 0 0 1 0 0 0 0
.............................................................................................................................TGTTGAACGTGAGGATCCCA................................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 1
.................................................................................................TTGCAGTTGATCGCA.................................................................................................................................................................................................................................................................................... 15 1 10 0.10 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................ACCGCCTGCAGGGGG............... 15 1 17 0.06 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................TGACTATGAGTTGCATTTCT......................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1 0
................................................................................................ATTGGAGTTGATTGC..................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0
............................................................................................ATTGATTGCAGTTAA......................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCCTATCGTCAGTCTCGGTAATGTGTGACCTTGATACGTAGGTAAAGGTCCATTCCGGAGTGGTGGTTAGTGTAGTTTACGTAAAGCTTTGGTAACTAACGTCAACTAACGTGTCGTGCTTTAAAACAACTTACAGTGCTAGGGTCCTTGAGAGGAGAAGTATTTGGAAGTCAATTGAATACAGATTTTTGGTATTGTAGTATCGAACTCTTCAAAATTATTTATTTTTACATACTAGGTATTACAGTCTCTCGAAAGATGAGGCAATCATTTCAAGAAACTGATAGTCGACGCAAAGATAAATTCCAGAGTATAAATGAGACGAAAATATGAACGTCCCCTGCGTGTCGTTAAAACTTGGCGGACGTCCTCCGCCCATAACGGTTAG
*************************************************************....((((..((((....)))).....((((.((((..((((.(((((.................))))).)))))))).)))).((((((.(((((((((((.......((((((((((((((((......))).))))))))))))).))))..))))))).)))))).))))..................************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M025
embryo
 SRR902009
testis
.......................................AGTTAAATGTCCATTCTGGAG........................................................................................................................................................................................................................................................................................................................................ 21 3 2 10.50 21 0 18 2 0 0 1 0 0 0
.............................................................................................................................................................................................................................................................................................AGTCGACGCAAAGATAAATTCCAGAGT............................................................................ 27 0 1 3.00 3 0 0 0 0 3 0 0 0 0
.................................................CCATTTCGGAGTGCTCGTTA............................................................................................................................................................................................................................................................................................................................... 20 3 2 3.00 6 0 0 6 0 0 0 0 0 0
................GGTAATGTGTGACCTTGG.................................................................................................................................................................................................................................................................................................................................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TAGGTATTACAGTCTCTCGAAAGAT................................................................................................................................ 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0
................GGTAATGTGTTACCTTGA.................................................................................................................................................................................................................................................................................................................................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.....................................................TCCGGAATGGTGGTTAGTGTAGT........................................................................................................................................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................AATCATTTCAAGAAACTGATAGTCGA................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................TAGTGTAGTTTACGTAAAGCTTTGGT....................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................GTCGTGCTTTAAAACAACTTA............................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................AGATGAGGCAATCATTTCAAGAAACTGAT....................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................ATAAATGAGACGAAAATATGAACGT................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATACTAGGTATTACAGT............................................................................................................................................ 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................TCGAAAGATGAGGCAATCATTT................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTGGTATTGTAGTATC........................................................................................................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0
............TCTCGGTAATGTGTGAC....................................................................................................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................AACTGATAGTCGACGCAAAGATAAATT................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................AGAAACTGATAGTCGACGCAAAGATAA...................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................AGGCAATCATTTCAAGAAACT.......................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................CATTTCAAGAAACTGATAGTCGACGCA............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CTCGAAAGATGAGGCAATCGT..................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................CGACGCAAAGATAAATTCCAGAGTAT.......................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CCTGCGTGTCGTTAAAACTTGGCGGA....................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................ACAGTCTCTCGAAAGATGAGGCAATCAT..................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................GTCGACGCAAAGATAAATTCCAGAG............................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................GTCGACGCAAAGATAAATTCCAGAGT............................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................CAACTTACAGTGCTAGGGTCCTT............................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................AACTGATAGTCGACGCAAAGATAAATTCC................................................................................. 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................ATGTGTGACCTTGATACGT............................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................AGGTATTACAGTCTCTCGAAAGAT................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................................GGTTAGTGTAGTTTACGTAAAGCTT........................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGTATTTGGAAGTCAATTGAATAC.............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................AAAACAACTTACAGTGCTAGGGTCAAT............................................................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................CGACGCAAAGATAAATTCCAGAGT............................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................CGAAAGATGAGGCAATCATTTCAAGA.............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................AGTTAAATGTCCATTCTGGA......................................................................................................................................................................................................................................................................................................................................... 20 3 7 1.00 7 0 5 2 0 0 0 0 0 0
...................................................................................................................................AACAGTGCTAGGGTCAATGAGAGGA........................................................................................................................................................................................................................................ 25 3 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................................................ACTTACAGTGCTAGGGTCAAT............................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0
....................ATGTGTGACCTTGATACGTAGGTAAAGGT................................................................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................CATTTCAAGAAACTGATAGTCGACGC.............................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................CATTCCGGAGTGGTGGTTAGTGTAGT........................................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................ACTAACGTCAACTAACGTGTCGTGCTTT.......................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................................................................................................................................CCCTGCGTGTCGTTAAAACTTGGCGGA....................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................GGGTCCTTGAGAGGAGAAGTA.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................ACAGTCTCTCGAAAGATGAGGCAATCATT.................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TGAGGCAATCATTTCAAGAAACTGAT....................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CTCGAAAGATGAGGCAATCATTT................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TCAACTAACGTGTCGTGCT............................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................GGTAATGTGTTACCTTG................................................................................................................................................................................................................................................................................................................................................................... 17 1 7 1.00 7 7 0 0 0 0 0 0 0 0
.......................................................................................................................TATAAAACAACTTACAGTGCTAGGGT................................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................AACTGATAGTCGACGCAAAGATAAAT.................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................TCTCTCGAAAGATGAGGCAAT........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................GGAGAAGTATTTGGAAGTCAATTGAAT................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TTCAAGAAACTGATAGTCGACGCAAAGAT........................................................................................ 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................TTACATACTAGGTATTACAGTCTTT........................................................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TCTCTCGAAAGATGAGGCAATCATTT................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AGTCGACGCAAAGATAAATTCTAGAGT............................................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................GGTAATGTGTCACCTTGG.................................................................................................................................................................................................................................................................................................................................................................. 18 2 11 0.55 6 6 0 0 0 0 0 0 0 0
.................................................CCATTTCGGAGTGCTCGTT................................................................................................................................................................................................................................................................................................................................ 19 3 9 0.44 4 0 0 4 0 0 0 0 0 0
.......................................................CAGAGTTGTGGTTAGTGTTGT........................................................................................................................................................................................................................................................................................................................ 21 3 5 0.20 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................AGAGTACCAATGAGACGA............................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAAATTCTTTATTCTTACAT........................................................................................................................................................... 20 2 5 0.20 1 0 0 1 0 0 0 0 0 0
................GGTAATGTGTTACCTT.................................................................................................................................................................................................................................................................................................................................................................... 16 1 17 0.18 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GGAAGTCGATTGAACATAGA........................................................................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0
.............................................................................TATGTAAAGCTTAGGTAACAAA................................................................................................................................................................................................................................................................................................. 22 3 9 0.11 1 1 0 0 0 0 0 0 0 0
................GGTAATGTGTTACCTTGT.................................................................................................................................................................................................................................................................................................................................................................. 18 2 19 0.11 2 2 0 0 0 0 0 0 0 0
.................................................CCATTTCGGAGTGTTCGTTA............................................................................................................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 1 0 0 0 0 0 0
................GGTAATGTGATACCTTGA.................................................................................................................................................................................................................................................................................................................................................................. 18 2 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................TATAGGTCCATGCCAGAGT....................................................................................................................................................................................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0
................GGTAATGTGTAACCTTGG.................................................................................................................................................................................................................................................................................................................................................................. 18 2 11 0.09 1 1 0 0 0 0 0 0 0 0
...............GGGTAATGTGTTACCTTG................................................................................................................................................................................................................................................................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGAAGGATTGGGATGTCAA...................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 1
.............GTCGGTAATGTGTTACCTTGG.................................................................................................................................................................................................................................................................................................................................................................. 21 3 16 0.06 1 1 0 0 0 0 0 0 0 0
.......................................AGTTAAATGTCCATTCTGG.......................................................................................................................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................TCTTGGGGGACGTTCTCC............... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................CCATTTCGGAGTGCTCGT................................................................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0
................GGCAATGTGTTACCTTG................................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3138598-3138985 + dsi_26983 GGGATAGCAGTCAGAGCCATTACACACTGGAACTATGCATCCATTTCCAGGTAAGGCCTCACCACCAATCACATC-------------AAATGCATTTCGAAACCA-TTG-ATTGC--AGTTGATTGCACAGCACGAAATTTTGTTGAATGTC------AC------GATCCCAGGAACTCTCCTCTTCATAAACCTTCAGTTAACTTATGTCTAAAAACCATAACATCATAGCTTGAGAAGTTTTAATAAATAAAAA-----------------------------------------T------------------------------------------------------------------------------------------------------------------------GTATGATCCATAATGTCAGAGAGCTTTCTACTCCGTTAGT--------AAAG---TTCTTTGACTA-----TC-----AGCTGCGTTTCTATTTAAGGTCTCATATTT-------ACTCTGCT-------TTTATACTTGCAGGGGACGCACAGCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATC
droSec2 scaffold_26:785815-786202 + GGGATAGCAGTCAGAGCCATTACACACTGGAACTATGCATCCATTTCCAGGTAAGGCCTCACCACCATGCACATC-------------AAATGCATTTCGAAACCA-TTG-ATTGC--AGTTGATTGCACAACACGAGATTTTGTTGAATGTC------AC------GATCCCAGGAACTCTTCTCTTCATAAACCTTCAGTTAACTTATATCTAAAAACCATAACATCATAGCTTGAGAAGTTTTAATAAATAAAAA-----------------------------------------T------------------------------------------------------------------------------------------------------------------------GTATGATCCATAATGTCAGAAAGCTTTCTACTCCGTTAGT--------AGAG---TTCTTTGACTA-----TC-----AGCTGCGTTTCTATTTAAGGTCTCATACTT-------ACTCTGCT-------TTTATACTTGCAGGGGACGCACAGCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATC
dm3 chr2R:2140811-2141162 + GGGATAGCAGTCAGAGCAATTACACACTGGAACTATGCGTCCATTTCCAGGTAGGGCA-------------CATC-------------AAATGCATTGCGAAACCA-TTG-----CCGAGTTGATTGCACAACACCAAATTTTGTTGAATGTC------AC------GATTCCGGGAACTCTCCTGTTCATAAACCTTCACTT-ACTTATACCTAAAAACCATAACATCATATCTTTAGAAGTTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAAAGCTTTCTACCCCGTTAGCTGATAGTCAAAG---------------------AACTTTACTACGTTTTTATTTCAAGTCACATATTT-------ACTCTGCT-------TTTATACTTGCAGGGGACGCACATCAATTTTGACCCGCCTGCAGGAGGCGGGTATTGCCAATC
droEre2 scaffold_4929:20184156-20184220 - CT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATACTTGCAGGGGACGCTCCGCAATTTTGAACCGACTGCAGGAGATGGGTATTGCCAATC
droYak3 2L:20325184-20325489 - ATTCTAC---------------------------------------------------------------------------------------------------------------------------GTCTAGAAATTTTGTTATTTCTC------ATCCGCAAGTCCACTAGAGTTTTTTTTTTG------GTTCAGTTAACTTCTATTTAAAAACCATAATAACATAGCTTTATAATTTAAATTTAATTAAGA-----------------------------------------TAATTTAA-------------------TT-AAGATT----TTATGGCAAATC---------------------ATG---------------------------------------------------------------------GTTCTACACTTTTAA--GATTGTAAAAGGCAGGTTTTGAATAGACGATTACCTTCTCTACGTTTTTATTTT-TGTTAAATATTT-------ATTTTGCT-------TTTACACTTGCAGGGGACGCACCTCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATC
droEug1 scf7180000409581:101636-101727 - GGCATTGCAGTCAGAGCCATTACACATTGGAATTACGCATCCATTTCCAGGTAAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCAACAAGTTTAAAGTGCTATGCGAAAGCATT-----------
droBia1 scf7180000302291:262835-262894 + GGCATTGCGGTTAGGGCCATTACGCACTGGAATTACGCATCCATTTCCAGGTGGGTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droTak1 scf7180000415401:774709-775077 + GGCATCGCTGTTAGGGCCATAACGCACTGGAATTACGCTTCCATTTCCAGGTGGGTTTTTACTAGCAAGAAAAA---------ACAG-AAATGGATTAGAATATCA-ATAAAATGCCGACA----TGTATA-----------------ATGTCAAATTTAT------GATCC------------------------------------------------------------------------AAACATG---------------------------------------TCAATGAGATATTTTATC---------------ATATCAGTAATT----TTATAGCAACTATTATATCAATAAAATGCCGACATGATTAATGTCAAAATTATTTTTAAAAAAATTTAAATTTTAAATTTTAAATGTTACATGTTGCC-------------------------------ATTG---------------------ATCTT----------------T-TGTTAGTTATTT-------ATTTTAATCCTTAAATTATTTTTTCTAGGGGACGCACAGGAATTTTAAACCGCCTGGTGGAGGCGGGCATTGCCAATC
droEle1 scf7180000490484:41012-41093 - GTCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAT-------AATATTCT-------TTCACTTTTTTAGGGGGCGCACTGCAATATTGAACCGCCTTCAGGAAGCAGGTGTTGCCGATC
droRho1 scf7180000780108:264672-264747 - TGTTTAATAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------TTTATTTTTCTAGGGGGCGCACTGCAATTTTGAATCGTCTGCAAGAGGCGGGTATTGCTGATC
droFic1 scf7180000453955:931289-931352 - GGCATTGCAGTCAGGGCCATCACGCACTGGAACTACGCTTCAATTTCTAGGTGAGCTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA
droKik1 scf7180000302817:58875-58933 - GGAATTGCTGTCCGGGCCATCACTCACTGGAACTATGCATCCATTTCCAGGTGAGGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:18663068-18663125 - GGAATTGCCGTGAGGGCCATAACCCACTGGAACTACGCCTCCATATCCAGGTAAGGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396417:200028-200096 + TACACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTCTTCCAGGGGACGCACCGCCATCCTGAACCGTCTGCAGGAGGCGGGCATCGCCGAAC
dp5 3:18081098-18081202 + TGACTATTGGTTGTACTCTTAGCCCTGCGGA-------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------TATAGGTC-------TCTGTTTGTCTAGGGGACGCACTGCTATACTGACACGTCTCCAGGAGGCCGGCGTCTCGGAGC
droPer2 scaffold_34:22665-22728 + CTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTCTAGGGGACGCACTGCTATACTGACACGTCTCCAGGAGGCCGGCGTCTCGGAGC
droWil2 scf2_1100000004512:1718384-1718438 - GGCATAGCTGTGAGGGCCATTACACACTGGAATTATGCCTCCATATCCAGGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:4928516-4928887 + dvi_5286 GGCATTGCAGTCCGTGCGATTACCCATTGGAATTATGCGTCCATATCCAGGTGCGTGCCTAACCTCACTTATGCTAAAGACAAGCAGTTGATGTATATGAAAAACACATAAAG--------------------------------------------------------------------------------------------------------------------CGCGTGCTATAATCTGATCTAAATCATGGAACGTTTGCTTTTCATAAATGATTTATTCTTTCCTGTGAAATTCTT---AAGATCTGCATTTTGGATATCATGAATTCTTACTTGAGCAATTATTGTCAGGGAATATTTAAGATATGATATAAGCATGGA--ATTTTTAAGGAAATATAAATAA-----------------------------------------------------------------------------------------------------------------CTCTCTCTCTCTCTCTCT-------CTACCCCCTCTAGAGGTCGCACAGCTATTCTGACACGCCTTCAGGAAGCGGGCATCGCCAAGC
droMoj3 scaffold_6496:25156373-25156441 - CTCTTCGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTGCAGAGGTCGCACTGCAATTTTGACACGCCTTCAGGAGGCGGGAATCACACAGC
droGri2 scaffold_15245:82405-82506 - TTTTTATCTAACGACTCAACT----AAAGTA-------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------TCTATGTA------TATCTCCCTCACAGAGGACGCACTGCGATTTTGACCCGGCTTCAGGAGGCTGGCATTGCCAAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGGATAGCAGTCAGAGCCATTACACACTGGAACTATGCATCCATTTCCAGGTAAGGCCTCACCACCAATCACATC-------------AAATGCATTTCGAAACCA-TTG-ATTGC--AGTTGATTGCACAGCACGAAATTTTGTTGAATGTC------AC------GATCCCAGGAACTCTCCTCTTCATAAACCTTCAGTTAACTTATGTCTAAAAACCATAACATCATAGCTTGAGAAGTTTTAATAAATAAAAA-----------------------------------------T------------------------------------------------------------------------------------------------------------------------GTATGATCCATAATGTCAGAGAGCTTTCTACTCCGTTAGT--------AAAG---TTCTTTGACTA-----TC-----AGCTGCGTTTCTATTTAAGGTCTCATATTT-------ACTCTGCT-------TTTATACTTGCAGGGGACGCACAGCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCAATTTTGAACCGCCT.......................2112.00211000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGCAATTTTGAACCGCCT.......................2312.00200200000000000000
.......................................................................................................................................................TC------AC------GATCCCAGGAACTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAACCGCCTGCAGGA.................1811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCAATTTTGAACCGCCTG......................2211.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAATTTTGAACCGCCTGC.....................2211.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGAACCGCCTGCAGGA.................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGGTCTCATATTT-------ACTCTGCT-------TT.............................................................2711.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCAATTTTGAACCGCC........................2011.00100100000000000000
droSec2
GGGATAGCAGTCAGAGCCATTACACACTGGAACTATGCATCCATTTCCAGGTAAGGCCTCACCACCATGCACATC-------------AAATGCATTTCGAAACCA-TTG-ATTGC--AGTTGATTGCACAACACGAGATTTTGTTGAATGTC------AC------GATCCCAGGAACTCTTCTCTTCATAAACCTTCAGTTAACTTATATCTAAAAACCATAACATCATAGCTTGAGAAGTTTTAATAAATAAAAA-----------------------------------------T------------------------------------------------------------------------------------------------------------------------GTATGATCCATAATGTCAGAAAGCTTTCTACTCCGTTAGT--------AGAG---TTCTTTGACTA-----TC-----AGCTGCGTTTCTATTTAAGGTCTCATACTT-------ACTCTGCT-------TTTATACTTGCAGGGGACGCACAGCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGAGGCGGGTATTGCC....2111.0010100
.................CATTACACACTGGAACTATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....................TACACACTGGAACTATGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGACTA-----TC-----AGCTGCGTT..........................................................................................................2111.0010100
dm3
GGGATAGCAGTCAGAGCAATTACACACTGGAACTATGCGTCCATTTCCAGGTAGGGCA-------------CATC-------------AAATGCATTGCGAAACCA-TTG-----CCGAGTTGATTGCACAACACCAAATTTTGTTGAATGTC------AC------GATTCCGGGAACTCTCCTGTTCATAAACCTTCACTT-ACTTATACCTAAAAACCATAACATCATATCTTTAGAAGTTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAAAGCTTTCTACCCCGTTAGCTGATAGTCAAAG---------------------AACTTTACTACGTTTTTATTTCAAGTCACATATTT-------ACTCTGCT-------TTTATACTTGCAGGGGACGCACATCAATTTTGACCCGCCTGCAGGAGGCGGGTATTGCCAATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................TACACACTGGAACTATGCGTCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000200000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................TTACACACTGGAACTATGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGAGCAATTACACACTGGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGATAGTCAAAG---------------------AACT....................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTTTGACCCGCCTGCAGGAGGC..............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................TGCATTGCGAAACCA-TTG-----CCGAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TTGAATGTC------AC------GATTCCGGGAACTCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AATGTC------AC------GATTCCGGGAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TTTATACTTGCAGGGGACGC...........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000
....................TACACACTGGAACTATGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................ACACACTGGAACTATGCGTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000
...............GCAATTACACACTGGAACTATGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................CACTGGAACTATGCGTCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTACACACTGGAACTATGCGTCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATGCGTCCATTTCCAGGTAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCCCGTTAGCTGATAGTC.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGTCCATTTCCAGGTAGGGCA-------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACTGGAACTATGCGTCCATTTCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGAGGCGGGTATTGCCAAA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTTTGACCCGCCTGCAGGAGGCG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGATAGTCAAAG---------------------AACTT...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....AGCAGTCAGAGCAATTACACAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACACTGGAACTATGCGTCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAAAGCT........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................TAAAAACCATAACATCATATC...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATTACACACTGGAACTATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CACCAAATTTTGTTGAATGTC------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AACCTTCACTT-ACTTATACCT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTTTCTACCCCGTTAGCTGATAGTC.................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACATCAATTTTGACCCGC.........................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCAGAGCAATTACACACTGGAACTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTTTGACCCGCCTGCAGGAG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTACACACTGGAACTATGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAAAGCTTTC.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACACACTGGAACTATGCGTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TTGCGAAACCA-TTG-----CCGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCGAAACCA-TTG-----CCGAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........TCAGAGCAATTACACACTGGAACTATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................TGGAACTATGCGTCCATTTCCAGGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCCGTTAGCTGATAGTCAAAG---------------------AA......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TGTC------AC------GATTCCGGGAACTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACTGGAACTATGCGTCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................A-TTG-----CCGAGTTGATTGCACAACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTACACACTGGAACTATGCGTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTG-----CCGAGTTGATTGCACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGTCCATTTCCAGGTAGGGCA-------------CATC-------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGTTTTTATTTCAAGTC.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................ACACTGGAACTATGCGTCCATTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATTCCGGGAACTCTCCTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCCGTTAGCTGATAGTCA................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATTTTGACCCGCCTGCAGGAGGC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCAGGGGACGCACATCAATTTTG...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTTTTATTTCAAGTCACAT.........................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGAGGCGGGTATTGCC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-------TTTATACTTGCAGGGGA..............................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CACTT-ACTTATACCTAAAAACCATAACA..................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTATTTCAAGTCACATATT......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TACACACTGGAACTATGCGTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCAGAGCAATTACACACTGGAACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................AGTTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAAA...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATAGCAGTCAGAGCAATTACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCTTTCTACCCCGTTAG..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TTCCGGGAACTCTCCTGTTCATAAACC.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AATGTC------AC------GATTCCGGGAACTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................TTTAGAAGTTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGA.............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AAGTTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAA............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.................AATTACACACTGGAACTATGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CATAACATCATATCTTTAGAAAGA.................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CCGAGTTGATTGCACAACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTG-----CCGAGTTGATTGCACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAATTTTGACCCGCCT.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTATGCGTCCATTTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................ACTGGAACTATGCGTCCATTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TAGCAGTCAGAGCAATTACACACTGGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATTACACACTGGAACTATGCGTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................TGCGTCCATTTCCAGGTAGGGCA-------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................CAATTACACACTGGAACTATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGAGCAATTACACACTGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGGCGGGTATTGCCAAT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................TAACATCATATCTTTAGAAGT..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAGAAGTTTTAATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGGAAAGC.........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACCCCGTTAGCTGATAGTCAAAG---------------------A.......................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCCATTTCCAGGTAGGGTG-------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
CT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATACTTGCAGGGGACGCTCCGCAATTTTGAACCGACTGCAGGAGATGGGTATTGCCAATCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCGACTGCAGGAGATGGGT..........2313.0030000210
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAATTTTGAACCGACT.......................1911.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAGGAGATGGGTA.........1811.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGAGATGGGTATTGCCA...2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGAACCGACTGCAGGAGATG.............2511.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAACCGACTGCAGGAGATGGGT..........2511.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCGACTGCAGGAGATGGG...........2111.0010000100
droYak3
ATTCTAC---------------------------------------------------------------------------------------------------------------------------GTCTAGAAATTTTGTTATTTCTC------ATCCGCAAGTCCACTAGAGTTTTTTTTTTG------GTTCAGTTAACTTCTATTTAAAAACCATAATAACATAGCTTTATAATTTAAATTTAATTAAGA-----------------------------------------TAATTTAA-------------------TT-AAGATT----TTATGGCAAATC---------------------ATG---------------------------------------------------------------------GTTCTACACTTTTAA--GATTGTAAAAGGCAGGTTTTGAATAGACGATTACCTTCTCTACGTTTTTATTTT-TGTTAAATATTT-------ATTTTGCT-------TTTACACTTGCAGGGGACGCACCTCAATTTTGAACCGCCTGCAGGAGGCGGGTATTGCCAATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA--GATTGTAAAAGGC...........................................................................................................................................1811.00100000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGAACCGCCTGCAGGA.................2011.00101000000000
droEug1
GGCATTGCAGTCAGAGCCATTACACATTGGAATTACGCATCCATTTCCAGGTAAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCAACAAGTTTAAAGTGCTATGCGAAAGCATT-----------SizeHit CountTotal NormTotal
No Reads
droBia1
GGCATTGCGGTTAGGGCCATTACGCACTGGAATTACGCATCCATTTCCAGGTGGGTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
GGCATCGCTGTTAGGGCCATAACGCACTGGAATTACGCTTCCATTTCCAGGTGGGTTTTTACTAGCAAGAAAAA---------ACAG-AAATGGATTAGAATATCA-ATAAAATGCCGACA----TGTATA-----------------ATGTCAAATTTAT------GATCC------------------------------------------------------------------------AAACATG---------------------------------------TCAATGAGATATTTTATC---------------ATATCAGTAATT----TTATAGCAACTATTATATCAATAAAATGCCGACATGATTAATGTCAAAATTATTTTTAAAAAAATTTAAATTTTAAATTTTAAATGTTACATGTTGCC-------------------------------ATTG---------------------ATCTT----------------T-TGTTAGTTATTT-------ATTTTAATCCTTAAATTATTTTTTCTAGGGGACGCACAGGAATTTTAAACCGCCTGGTGGAGGCGGGCATTGCCAATCSizeHit CountTotal NormTotal
No Reads
droEle1
GTCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAT-------AATATTCT-------TTCACTTTTTTAGGGGGCGCACTGCAATATTGAACCGCCTTCAGGAAGCAGGTGTTGCCGATCSizeHit CountTotal NormTotal
No Reads
droRho1
TGTTTAATAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------TTTATTTTTCTAGGGGGCGCACTGCAATTTTGAATCGTCTGCAAGAGGCGGGTATTGCTGATCSizeHit CountTotal NormTotal
No Reads
droFic1
GGCATTGCAGTCAGGGCCATCACGCACTGGAACTACGCTTCAATTTCTAGGTGAGCTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCASizeHit CountTotal NormTotal
No Reads
droKik1
GGAATTGCTGTCCGGGCCATCACTCACTGGAACTATGCATCCATTTCCAGGTGAGGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GGAATTGCCGTGAGGGCCATAACCCACTGGAACTACGCCTCCATATCCAGGTAAGGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........GAGGGCCATAACCCACTGGAACTACGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................ATAACCCACTGGAACTACGCCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................TACGCCTCCATATCCAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
TACACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTCTTCCAGGGGACGCACCGCCATCCTGAACCGTCTGCAGGAGGCGGGCATCGCCGAACSizeHit CountTotal NormTotal
No Reads
dp5
TGACTATTGGTTGTACTCTTAGCCCTGCGGA-------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------TATAGGTC-------TCTGTTTGTCTAGGGGACGCACTGCTATACTGACACGTCTCCAGGAGGCCGGCGTCTCGGAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........GGTTGTACTCTTAGCCCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGGAGGCCGGCGTCTCGGA..2311.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGGAGGCCGGCGTCTC.....2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTATACTGACACGTCTCCAGGA.................2611.0010100000000
............GTACTCTTAGCCCTGCGGA-------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTCTAGGGGACGCACTGCTATACTGACACGTCTCCAGGAGGCCGGCGTCTCGGAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACTGCTATACTGACACGT.........................2113.003110001
CTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTCTAGGGGG..............................................1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCCAGGAGGCCGGCGT........1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACTGACACGTCTCCAGGA.................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACTGACACGTCTCCAGG..................2111.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACTGCTATACTGACACAG.........................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTATACTGACACGTCTCCAGGA.................2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGGAGGCCGGCGTCTCGG...2211.001010000
CTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTCTAGGGGA..............................................1811.001100000
droWil2
GGCATAGCTGTGAGGGCCATTACACACTGGAATTATGCCTCCATATCCAGGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......GCTGTGAGGGCCATTACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
GGCATTGCAGTCCGTGCGATTACCCATTGGAATTATGCGTCCATATCCAGGTGCGTGCCTAACCTCACTTATGCTAAAGACAAGCAGTTGATGTATATGAAAAACACATAAAG--------------------------------------------------------------------------------------------------------------------CGCGTGCTATAATCTGATCTAAATCATGGAACGTTTGCTTTTCATAAATGATTTATTCTTTCCTGTGAAATTCTT---AAGATCTGCATTTTGGATATCATGAATTCTTACTTGAGCAATTATTGTCAGGGAATATTTAAGATATGATATAAGCATGGA--ATTTTTAAGGAAATATAAATAA-----------------------------------------------------------------------------------------------------------------CTCTCTCTCTCTCTCTCT-------CTACCCCCTCTAGAGGTCGCACAGCTATTCTGACACGCCTTCAGGAAGCGGGCATCGCCAAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........GTCCGTGCGATTACCCATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...ATTGCAGTCCGTGCGATTACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
GGCATTGCAGTCCGTGCGATTACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCACAGCTATTCTGACA............................2011.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
CTCTTCGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTGCAGAGGTCGCACTGCAATTTTGACACGCCTTCAGGAGGCGGGAATCACACAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACACGCCTTCAGGAGG...............2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGCACTGCAATTTTGACA............................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGTCGCACTGCAATTTTGACA............................2411.001000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGGAGGCGGGAATC.......1811.001100000
droGri2
TTTTTATCTAACGACTCAACT----AAAGTA-------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------TCTATGTA------TATCTCCCTCACAGAGGACGCACTGCGATTTTGACCCGGCTTCAGGAGGCTGGCATTGCCAAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:23 PM