ID:

dsi_26953

 Coordinate:

2r:6355679-6355828 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.1 -31.0 -30.9 -30.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
FB4_DMDNATcMar-Tc1+
(TA)nSimple_repeatSimple_repeat+
mature
  1. 2r:1666542-1666557 +
  2. dsi_26953  2r:6355752-6355767 -
  3. 2r:8307193-8307208 +
  4. 3r:3479203-3479218 +
  5. 3r:18626346-18626361 +
  6. x:5880666-5880681 -
  7. x:20486023-20486038 +
star

Sense Strand Reads

AGGCGACCAGGCCCAAAAAGGCAAAAAACGCTATCTCCGAGGATATAATGGTAAGGATCCAATACTATATATACTGAATATGTTTTTTATATGTATATGTCTATAAGCTATATATATATAGCTTATATATATATATATATATTTTATATCTTAAAAACTAATTGGTGGACCAACATGGGCAAAAAATAGGCAAGCGATTCAAGCTTTCAAAAGTTCGATTTTTCCGAACCCAGTTTCTTTGAGCTCTATA
**************************************************....((........((((...((((((.((.(((((((((((((((((((.(((((((((((....))))))))))).)))))))))))))...........)))))))).))))))..................)))).........))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
.......................................................................................................................................................................................................................CGATTTTTCCGAACCCAG................. 18 0 20 1.65 33 0 0 33 0 0 0 0
..............................................................................................................................................................................................................TCAAAAGTTCGATTTTTCCGA....................... 21 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................AGTTCGATTTTTCCGAACCCA.................. 21 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................TCCGAACCCAGTTTCTTTGAGC...... 22 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCGAACCCACTGTCTTTGA........ 19 2 1 1.00 1 0 1 0 0 0 0 0
................................................TGGTAATGATCCAATA.......................................................................................................................................................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0
.......................AAAAACGCTATCTCGG................................................................................................................................................................................................................... 16 1 4 0.25 1 1 0 0 0 0 0 0
..............................................................................TATGTTGTGTATATGTATATGTGT.................................................................................................................................................... 24 3 7 0.14 1 0 0 0 0 1 0 0
...............................................................................................................ATATATATAGCTTATA........................................................................................................................... 16 0 8 0.13 1 1 0 0 0 0 0 0
........................................GGAGATAATGGTAAG................................................................................................................................................................................................... 15 1 12 0.08 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................AAGAGATTCACGCTCTCAA........................................ 19 3 13 0.08 1 1 0 0 0 0 0 0
..........................................................................................................................TTGTATATAAATATATATATTTTGTA...................................................................................................... 26 3 18 0.06 1 0 0 0 0 0 1 0
..............................................................................................................................................................................................................TCACAAGTTCGATCTTT........................... 17 2 20 0.05 1 0 0 0 0 0 1 0
.......CAGGACCAAAAAGGC.................................................................................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCGAACCCACTGTCATTGA........ 19 3 20 0.05 1 0 0 0 0 0 0 1
.....................................................................................................................................................................TGGACCAACATTGACA..................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

TCCGCTGGTCCGGGTTTTTCCGTTTTTTGCGATAGAGGCTCCTATATTACCATTCCTAGGTTATGATATATATGACTTATACAAAAAATATACATATACAGATATTCGATATATATATATCGAATATATATATATATATATAAAATATAGAATTTTTGATTAACCACCTGGTTGTACCCGTTTTTTATCCGTTCGCTAAGTTCGAAAGTTTTCAAGCTAAAAAGGCTTGGGTCAAAGAAACTCGAGATAT
**************************************************....((........((((...((((((.((.(((((((((((((((((((.(((((((((((....))))))))))).)))))))))))))...........)))))))).))))))..................)))).........))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 M023
head
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR902008
ovaries
 M024
male body		 SRR902009
testis
........................................................................................................................................................................................................................CTAAAAAGGCTTGGGT.................. 16 0 20 5.75 115 115 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCTAAAAAGGCTTGGGT.................. 18 0 20 2.70 54 21 0 0 0 33 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTAAAAAGGCTGGGGTCAGAGAAACT........ 26 2 2 2.00 4 0 1 2 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................ACCACCTGCTTGAACCCG...................................................................... 18 2 3 1.67 5 0 5 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCTAAAAAGGCTGGGGTCAGAGAAACT........ 28 2 2 1.50 3 0 0 1 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................AAGCTAAAAAGGCTTGGGT.................. 19 0 20 1.10 22 22 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGTACCCGTTTTTTATCCGTT......................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................TTTTCAAGCTAAAAAGGCTTGGGT.................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGCTAAAAAGGCTTGGGTC................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TAAAAAGGCTGGGGTCAGAGAAAC......... 24 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAGCTAAAAAGGCTGGGGTCAGAGAA........... 26 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TTATACAGGTTTTCGATATATATA..................................................................................................................................... 24 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................TAAAAAGGCTGGGGTCAGAGAAACT........ 25 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CTTCATGCTAAAAAGGCTTGGGT.................. 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AAAAAGGCTGGGGTCAGAGAAACT........ 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TTCTTGATTAACCATCGGGTTG............................................................................ 22 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................AAAAAAAATACAGAGACAGATAT................................................................................................................................................. 23 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TGATTAACCATCGGGTTG............................................................................ 18 2 13 0.15 2 0 0 0 0 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................................CTAAAAAGGCTTGGAT.................. 16 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAACCACCTGTTTGTACCCGTTTTT................................................................. 25 1 14 0.14 2 0 0 0 0 0 0 0 0 0 2 0 0
..............................................................................................................................................................................................................................AGGCTGGGGTCAGAGAAACTCGAT.... 24 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................GCTTGTTGCGATAGAGG.................................................................................................................................................................................................................... 17 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AAAAAGGCTGGGGTCAGAGAAACTCGAT.... 28 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ATATTCGATATATATA..................................................................................................................................... 16 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................ACCACCTGCTTGTAC......................................................................... 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGCATATACTCATATTCGA............................................................................................................................................. 20 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATTCTTGATTAACCA.................................................................................... 16 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................AAAATATCGATTTTTTGAT.......................................................................................... 19 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................CGCAAGTTTTAAAGCTACAA............................ 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................AAGCTAAAAAGGCTTGGAT.................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATAGATTTTTTGATTA........................................................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TAGAGTTTTTGATTA........................................................................................ 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTAAAAAGGCTTGGGTC................. 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCGAAAGTTTTCAAA.................................. 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCTAAAGAGGCTTGGGT.................. 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AAAATATACAAATAGAGATC.................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTAAAAAGGCTTGGG................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6355629-6355878 - dsi_26953 AGGC------GACCAGGCCCAAAAAGGCAAAAAACGCTATCTCCGAGGATATAATGGTAAGG-ATCCAATACTATATATACTGAATATGTTTTTTA-------------T--ATGTATAT-------G--------------TCT--A-TAAGCTAT--------------------------------------------------------------------------------------------ATATATAT----------AGCTTATATATATATATATATATTTTATATCTTAAAAACTAATTGGTGGACCAACATGGGCAAAAAAT--------------------------------AGGCAAGCGATTCAAGCTTTCA--------------------------------------------------------------------------------AAAGTTCG--ATTTTTCCGAACCCAGTTTCTTTGAGCTC------------------------------------------------------------------------------TATA
droSec2 scaffold_1:3186857-3187004 - AGGC------GACCAGGCCCAAGAGGGCAAAAGACGCTATCTCCGAGGATATAATGGTAAGG-CTCCAATACTATATATACTGAATATGTTTTTTAT-TTTATTTTATATGTATGTATAT-------G--------------TCT--A-TAAGC----------------------------------------------------------------------------------------------------------------TAGCTC----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATCTTAAAAA------------------------------------------------------------------------------CTGA
dm3 chr2L:21707676-21707781 + AAAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCAAAAAAT--------------------------------GGGCAAACGATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------AAAATTTCG--ATTTTTCCGACCCCAGCTTCTTTGAGCTG-----------------------------------------------------------------------------CTGTA
droEre2 scaffold_4845:19092278-19092475 + ATGG------GCGTGT------------------------TTTTGGGCTTTCTATAGTACAT-CTTCT-----------------------GTTTATATGGAAC-----------A--TTGATTTAAGTTTCAAA--CATTCC--AAA-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGAAACATGTGGACAAACAATAATGCAATGTAAAAAAAAATTGTTTTTCTAGTTTTCTAGCGATTCTAGCTTTCTA-------------------------------------------------------------------------------AAAATTCG--ATTTTTCCCAAACCAGCTTCTTTAAGCTG------------------------------------------------------------------------------GACA
droYak3 2L:18202002-18202195 - AGGC------GACCAAGCCCAAAAAAGCAGAAAACCCCATCTCCGAGGATATAATGGTAAGG-TTGCAATATT-----TCCTAAATATGCTTACACA-TATGTTTTATGA--GAGGATAT-------A--------------CCTCAAGCAAAT----------------------------------------------------------------------------------------------------------------TAGCTC----------TTA----------------T----------------------------------------------------------------------------------------------------------------------------------------ATTATATATGTATATCGGTTGGGACGTTGG-GATGTTCA--TACATAGTGGAT-------------------------------------------------------------------------------GCATTCACTG----AACTAT
droEug1 scf7180000409209:591755-591972 + AGAA------TCAAAAGTCAGCTAAATCCAAGAATGCTATATCTGAGGATATAATGGTGAGT-TTACTTTATCGTAT--------------GTT---------------------A--TT------------ATGAGTAACTT--AAA-AGAGTTAT---------------CCATTTCTGAATATTTAAGCATTTGGTTATATTTTGTGATTAAATGTTATTCTAATCAGAAAAGAACTTTTTTAAATTTGTTTTTTCTTCACATTCAACC----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTCTCTAGCTAC------------------------------------------------------------------------------TGTA
droBia1 scf7180000301757:44145-44251 - ATATTTTAAAAC----------------------------------------------------------------------------------------------------------------------------------T--AAA-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTACAAACGTGGACAAACGAT--------------------------------AGGCAAAGAATTTCCGTTTTCAAATTTA-------------------------------------------------------------------------AAAAATTTC--ATTTTACCGAACCCAGCTTCTTTAAGCTC----------------------------------------------------------------------------------
droTak1 scf7180000415711:1465-1584 - ATTT------TATATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAACTGGA-CGTGGGCAAACATGGGCAAAAGTT--------------------------------GGGCAAACGATTCGGCTTTTCAAATTTC-------------------------------------------------------------------------AAAAATTTC--ATTTTTGTCAACCCAGCTTCTTTGAGCTC------------------------------------------------------------------GTA--------ATTTA
droEle1 scf7180000491107:1531702-1531995 + AGGC------AATTAACCCCAAAGAAACAAAAAACATCGTCTCCGAGGATCTCATGGTGAGT-TGACGCCAATTCAT--------------ATC-ATTCAGATG-----------C--AT-------AGCTAAAAAGTTACTT--AAA-GGA-------------------------TTAAAAAATATATGTATTTAGTT-TAAT-------------------------------------------------------------TGGCTC----------TTA----------------AATACACAT-----------------------------------------------------------------------------------------------------TAATTTTCTGATCTAATAAGATGTAAAGTTGTATATTTGTTTTGATGAAAACCCT----------------------------AGTGTTTCAAGA-TAGAGACCTACAAATATTAAAATATTAAAAAGGCAATTTGAACAAAAACAATCCCATATTCAAGTATGCA--------CTTAA
droRho1 scf7180000777217:466764-467011 - AGGC------GATCCAGCCCAAAAAAACTAAAAACATTGTCTCCGAGGATCTCATGGTGAGT-TTCAT-----------------------ACC-ACTTAGAAA-----------A--AT------------AAAAATAATTT--AAG-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGGAAAATATAGTTTATAGTG--------------------------------GTTCCTATTTTTCTATTTCTTAAAATTTATATAAATATATGTATATATTTTTTAATTTA------------------------------------------TAAAAATTT--ATAATATGGAAACGAACTGTTCTAAGTTTAAAGACCTGCAAGGAT----------------------------------------------ACAAACATTTTAATCATTTT
droFic1 scf7180000453213:1134-1238 + AAAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAA-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACGTGGTCAAACGAG--------------------------------GGTCAAACGATTCCAATTTTCAAAATTG-------------------------------------------------------------------------AAA--TTCGAAATTTTTTTGGACCCAACTTCTTTAAGCTC------------------------------------------------------------------------------AATC
droKik1 scf7180000302639:2949653-2949756 + AAAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCAAACGAT--------------------------------GGGCAAACGATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------GAAAA-AAA--ATTTTTCCGAACCTGGCTTCTCTGAGCTC------------------------------------------------------------------------------CAAA
droAna3 scaffold_13266:12856227-12856278 - TGGC------GGGGAGGTCTGGAAAACCCTCCAAA---ATATCCGAAGATGTTATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396730:1068150-1068201 + TGGC------GGGAAGGTCTGGAAAACCCGCAAAA---ATATCCGAGGATATTATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:1116640-1116694 + AGAG------CGGGCGGGCCGGCAAGCCGAAGAGCGTCATTTCCGAGGATCTTATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:5872168-5872218 - TATATATATATA----------------------------------------------------------------------------------------------------------------------------------T--ATA-T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--ATATATATACATATAGTATATTTATATAT------------------------------------------------------------------------------ATAT
droMoj3 scaffold_6496:24178638-24178757 + AACG------AAAAA-----------------AGTAGTGTCTCTGAGGATACAATAGTAAGTAGTACAGTAGT-----AAGTAAACATGTA----------------------------------------------------------GTATTTACTTAAAATGAAAGATC-----------------AGCAAT------------------------------------------------------AGACAT----------------------------------------------------------------------------------------------------------------------------CCACTTCATAAATTTA-------------------------------------------------------------------------CAA--------------------------------------------------------------------------------------------------------------------ATA
droGri2 scaffold_13000:6181-6283 + ATTG------TAAAGA------------------------------------------------TATATATTTATATATATTATATTTATATTATATATATATA----------------------------------------T--A-TTATATAT--------------------------------------------------------------------------------------------ATATATAT----------ATATTATATATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATTATATT------------------------------------------------------------------------------TAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGGC------GACCAGGCCCAAAAAGGCAAAAAACGCTATCTCCGAGGATATAATGGTAAGG-ATCCAATACTATATATACTGAATATGTTTTTTA-------------T--ATGTATAT-------G--------------TCT--A-TAAGCTAT--------------------------------------------------------------------------------------------ATATATAT----------AGCTTATATATATATATATATATTTTATATCTTAAAAACTAATTGGTGGACCAACATGGGCAAAAAAT--------------------------------AGGCAAGCGATTCAAGCTTTCA--------------------------------------------------------------------------------AAAGTTCG--ATTTTTCCGAACCCAGTTTCTTTGAGCTC------------------------------------------------------------------------------TATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--ATTTTTCCGAACCCAG...............................................................................................18201.6533000003300000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------------------------------------------------------------------------AAAGTTCG--ATTTTTCCGA.....................................................................................................2111.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCG--ATTTTTCCGAACCCA................................................................................................2111.00100001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAACCCAGTTTCTTTGAGC....................................................................................2211.00100000000001000000
.........................................................................................................................................................................................................................................................ATATATAT----------AGCTTATA...........................................................................................................................................................................................................................................................................................................................1680.13100000000001000000
droSec2
AGGC------GACCAGGCCCAAGAGGGCAAAAGACGCTATCTCCGAGGATATAATGGTAAGG-CTCCAATACTATATATACTGAATATGTTTTTTAT-TTTATTTTATATGTATGTATAT-------G--------------TCT--A-TAAGC----------------------------------------------------------------------------------------------------------------TAGCTC----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATCTTAAAAA------------------------------------------------------------------------------CTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
AAAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCAAAAAAT--------------------------------GGGCAAACGATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------AAAATTTCG--ATTTTTCCGACCCCAGCTTCTTTGAGCTG-----------------------------------------------------------------------------CTGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
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OSC		V145
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1182-2H		V148
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.................................................................................................................................................AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCT.....................................................................................................................................................................................................................................................................22201.65330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000010000000001900000000000000000100103050004400000
................................................................................................................................................................................................................................................................................................................................ACATGGGCAAAAAAT--------------------------------GGGCAAA........................................................................................................................................................................................................................22201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000270000000000000000002000000000000000000000000001000110
..AA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACA...........................................................................................................................................................................................................................................................................21201.653300000000000000000000000000000000000000000000000000001000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000002000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------AAA.......................................................................................................................22201.603200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000005220000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAAAT--------------------------------GGGCAAACGATTCCAGC..............................................................................................................................................................................................................22201.603200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000210000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCAGCTTCTTTGAGCT...................................................................................20201.603200000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004170000000000000000600000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CGATTCCAGCTTTCAAATTT....................................................................................................................................................................................................20201.603200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCTTTCAAATTTC-------------------------------------------------------------------------AAA.......................................................................................................................21201.6032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000111300000000000000000000000000000000000
...A------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACAT..........................................................................................................................................................................................................................................................................21201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000270000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AACATGGGCAAAAAAT--------------------------------GGG............................................................................................................................................................................................................................19201.45290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000100000000000000000000000000000000003000000000000000000000000000000000000000000000000000000003001000000001000000000000000000000000010000002220000002200000000000000000000000000010100000
...................................................................................................................................................T-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCAT....................................................................................................................................................................................................................................................................21201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000005000000000000000000000001150000300010
..................................................................................................................................................AT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGTT.....................................................................................................................................................................................................................................................................21201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000001030500200300
.........................................................................................................................................................................................................................................................................................................................TGGGCAAACATGGGCAAAAAA................................................................................................................................................................................................................................................................21201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015001010000000000000000000002000000010
..............................................................................................................................................................................................................................................................................................................................AAACATGGGCAAAAAAT--------------------------------GGGCT..........................................................................................................................................................................................................................22201.352700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000001500000000000000000000001001210001000
............................................................................................................................................................................................................................................................................................................................GCAAACATGGGCAAAAAAT--------------------------------G..............................................................................................................................................................................................................................20201.352700000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001700000000000000008000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--ATTTTTCCGACCCCAGCTTT...........................................................................................22201.30260000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000010000012000000000300000000000000000001002400250000000
.................................................................................................................................................................................................................................................................................................................................................................................GCAAACGATTCCAGCTTTCA.........................................................................................................................................................................................................20201.302600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001130000010010000003000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................GGCAAAAAAT--------------------------------GGGCAAACGAT....................................................................................................................................................................................................................21201.302600000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000001000000001700000000000000000000000000000000000
..................................................................................................................................................AT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCT.....................................................................................................................................................................................................................................................................21201.30260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000040000000020000002000000010000000000000000000560000000
...................................................................................................................................................T-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGG.......................................................................................................................................................................................................................................................................18201.30260000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000490000000020000000000000000000001000100002000102000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCTTTCAAATTTC-------------------------------------------------------------------------AA........................................................................................................................20201.302600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000003180000000000000004000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GTGGGCAAACATGGGCAAAG..................................................................................................................................................................................................................................................................20201.252500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002100000000000000000000000001010001000
...........................................................................................................................................................................................................................................................................................................................................................................................CCAGCTTTCAAATTTC-------------------------------------------------------------------------AAAA......................................................................................................................20201.252500000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002120000000200000000300000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ATGGGCAAAAAAT--------------------------------GGGCAA.........................................................................................................................................................................................................................19201.2024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGGGCAAACATGGGCAAA...................................................................................................................................................................................................................................................................18201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000180100000000010002000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................CGATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------..........................................................................................................................21201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000320000000000000000000000000000000000000000003000000000000000000001301000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GGCAAACATGGGCAAAAAAT--------------------------------G..............................................................................................................................................................................................................................21201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000020000001000000000000000000000000101002000000000100000000000000000000000000000000100011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCCGACCCCAGCTTCT..........................................................................................20201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000110000000000000006000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................AAACGATTCCAGCTTTCAA........................................................................................................................................................................................................19201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000190000000000000000000000000000000000000000000200000000
........................................................................................................................................................................................................................................................................................................................GTGGGCAAACATGGGCAAGG..................................................................................................................................................................................................................................................................20201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061500000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG--ATTTTTCCGACCCCAGCTT............................................................................................22201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000001500000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000040000000010000001000000000000000000000000303000000000
..............................................................................................................................................T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGG........................................................................................................................................................................................................................................................................20201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000011000110000000000000000000000000000000000000000000010000000
.AAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAAC............................................................................................................................................................................................................................................................................21201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000011011000000000010000000000020000000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCCGACCCCAGCTTCTTT........................................................................................22201.002000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000000000000000000000000000000000000000000000001000000000000000000031000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTTCG--ATTTTTCCGACC...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGGGCAAAAAAT--------------------------------GGGCAAA........................................................................................................................................................................................................................19201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003150000000000000000200000000000000000000000000000000000
...........C----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATG.........................................................................................................................................................................................................................................................................20201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000001000000000000001000000000000000000000000000000000000080000000000000002000000000000000000000002010200000000
.............................................................................................................................................................................................................................................................................................................................................................................................AGCTTTCAAATTTC-------------------------------------------------------------------------AAAATT....................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCCAGCTTTCAAATTTC-------------------------------------------------------------------------AAAATTTCG--A..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCG--ATTTTTCCGACCCCAGC..............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--ATTTTTCCGACCCCAGCT.............................................................................................20201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200900000000000000000000000000000000000000001000001000000000000000000000000000000001000000000000000000001000000000000000000000000000000000100040000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCTTTCAAATTTC-------------------------------------------------------------------------A.........................................................................................................................19201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTC-------------------------------------------------------------------------AAAATTTCG--ATTTTTCCG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................T-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCAAAA..................................................................................................................................................................................................................................................................23200.95190000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000270100000000000000300000000000003000000000000000020000
.............................................................................................................................................................................................................................................................................................................................CAAACATGGGCAAAAAAT--------------------------------GGGA...........................................................................................................................................................................................................................22200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001900000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG--ATTTTTCCGACCCCAG...............................................................................................20200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000001140000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAAT--------------------------------GGGCAAACGATTCCAGCT.............................................................................................................................................................................................................22200.90180000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000002100300000000000000004000000000000000000000000000010000000
.................................................................................................................................................AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGG........................................................................................................................................................................................................................................................................19200.901800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000200010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTCCGACCCCAGCTTC...........................................................................................20200.90180000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000009000000000000000000000000000000000000
..............................................................................................................................................T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGT......................................................................................................................................................................................................................................................................22200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000500000000020000004000000010000000100000000000100010020
..................................................................................................................................................AT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCC.....................................................................................................................................................................................................................................................................21200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000015000000000100000000000000000000000000
...A------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAAC............................................................................................................................................................................................................................................................................19200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002130000010000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AAACATGGGCAAAAAAT--------------------------------GGGT...........................................................................................................................................................................................................................21200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000001800000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGGGCAAAAAAT--------------------------------GGGCAAACGAT....................................................................................................................................................................................................................23200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100000000000000100000001020005000000000010000000000
..........................................................................................................................................................................................................................................................................................................................................AAAAT--------------------------------GGGCAAACGATTCCAGT..............................................................................................................................................................................................................22200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000060000000000000000800000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................................GGTGGGCAAACATGGGCAAAA..................................................................................................................................................................................................................................................................21200.75150000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000700000000000000000000000010000000000000000100120010000
..............................................................................................................................................T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGC.......................................................................................................................................................................................................................................................................21200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000006300000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------A.........................................................................................................................21200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003800000000000000000000000000010000000
...A------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGC......................................................................................................................................................................................................................................................................25200.75150000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100001200000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000100000000200000000000000001000000000
..................................................................................................................................................................................................................................................................................................................................ATGGGCAAAAAAT--------------------------------GGGCAAG........................................................................................................................................................................................................................20200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GGGCAAACGATTCCAGCTTTC..........................................................................................................................................................................................................21200.70140000000000000000000000000000000000000000000000000000000000200000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000500000000000000004000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG--ATTTTTCCGACCCCAGCTTC...........................................................................................24200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGGGCAAACATGGGCAAAAAAT--------------------------------...............................................................................................................................................................................................................................22200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000002000000000000000000000000001010000000
........................................................................................................................................................................................................................................................................................................................................................................................ATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------AA........................................................................................................................21200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000002000000000000000000000
..............................................................................................................................................T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCA.....................................................................................................................................................................................................................................................................23200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001100010000100000000000100000061001000
...............................................................................................................................................................................................................................................................................................................................AACATGGGCAAAAAAT--------------------------------GGGCAA.........................................................................................................................................................................................................................22200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000003900000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGGGCAAACATGGGCAAAAAAT--------------------------------G..............................................................................................................................................................................................................................23200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000010000000000000000000001001000000
...................................................................................................................................................................................................................................................................................................................................TGGGCAAAAAAT--------------------------------GGGCAAACGT.....................................................................................................................................................................................................................22200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000001000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................AAAAT--------------------------------GGGCAAACGATTCCA................................................................................................................................................................................................................20200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000004500000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AT--------------------------------GGGCAAACGATTCCAGCTTT...........................................................................................................................................................................................................22200.701400000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000030000000000000000000000000000
droEre2
ATGG------GCGTGT------------------------TTTTGGGCTTTCTATAGTACAT-CTTCT-----------------------GTTTATATGGAAC-----------A--TTGATTTAAGTTTCAAA--CATTCC--AAA-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGAAACATGTGGACAAACAATAATGCAATGTAAAAAAAAATTGTTTTTCTAGTTTTCTAGCGATTCTAGCTTTCTA-------------------------------------------------------------------------------AAAATTCG--ATTTTTCCCAAACCAGCTTCTTTAAGCTG------------------------------------------------------------------------------GACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AGGC------GACCAAGCCCAAAAAAGCAGAAAACCCCATCTCCGAGGATATAATGGTAAGG-TTGCAATATT-----TCCTAAATATGCTTACACA-TATGTTTTATGA--GAGGATAT-------A--------------CCTCAAGCAAAT----------------------------------------------------------------------------------------------------------------TAGCTC----------TTA----------------T----------------------------------------------------------------------------------------------------------------------------------------ATTATATATGTATATCGGTTGGGACGTTGG-GATGTTCA--TACATAGTGGAT-------------------------------------------------------------------------------GCATTCACTG----AACTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AGAA------TCAAAAGTCAGCTAAATCCAAGAATGCTATATCTGAGGATATAATGGTGAGT-TTACTTTATCGTAT--------------GTT---------------------A--TT------------ATGAGTAACTT--AAA-AGAGTTAT---------------CCATTTCTGAATATTTAAGCATTTGGTTATATTTTGTGATTAAATGTTATTCTAATCAGAAAAGAACTTTTTTAAATTTGTTTTTTCTTCACATTCAACC----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTCTCTAGCTAC------------------------------------------------------------------------------TGTASizeHit CountTotal NormTotal
No Reads
droBia1
ATATTTTAAAAC----------------------------------------------------------------------------------------------------------------------------------T--AAA-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTACAAACGTGGACAAACGAT--------------------------------AGGCAAAGAATTTCCGTTTTCAAATTTA-------------------------------------------------------------------------AAAAATTTC--ATTTTACCGAACCCAGCTTCTTTAAGCTC----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATTT------TATATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAACTGGA-CGTGGGCAAACATGGGCAAAAGTT--------------------------------GGGCAAACGATTCGGCTTTTCAAATTTC-------------------------------------------------------------------------AAAAATTTC--ATTTTTGTCAACCCAGCTTCTTTGAGCTC------------------------------------------------------------------GTA--------ATTTASizeHit CountTotal NormTotal
No Reads
droEle1
AGGC------AATTAACCCCAAAGAAACAAAAAACATCGTCTCCGAGGATCTCATGGTGAGT-TGACGCCAATTCAT--------------ATC-ATTCAGATG-----------C--AT-------AGCTAAAAAGTTACTT--AAA-GGA-------------------------TTAAAAAATATATGTATTTAGTT-TAAT-------------------------------------------------------------TGGCTC----------TTA----------------AATACACAT-----------------------------------------------------------------------------------------------------TAATTTTCTGATCTAATAAGATGTAAAGTTGTATATTTGTTTTGATGAAAACCCT----------------------------AGTGTTTCAAGA-TAGAGACCTACAAATATTAAAATATTAAAAAGGCAATTTGAACAAAAACAATCCCATATTCAAGTATGCA--------CTTAASizeHit CountTotal NormTotal
No Reads
droRho1
AGGC------GATCCAGCCCAAAAAAACTAAAAACATTGTCTCCGAGGATCTCATGGTGAGT-TTCAT-----------------------ACC-ACTTAGAAA-----------A--AT------------AAAAATAATTT--AAG-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGGAAAATATAGTTTATAGTG--------------------------------GTTCCTATTTTTCTATTTCTTAAAATTTATATAAATATATGTATATATTTTTTAATTTA------------------------------------------TAAAAATTT--ATAATATGGAAACGAACTGTTCTAAGTTTAAAGACCTGCAAGGAT----------------------------------------------ACAAACATTTTAATCATTTTSizeHit CountTotal NormTotal
No Reads
droFic1
AAAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAA-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACGTGGTCAAACGAG--------------------------------GGTCAAACGATTCCAATTTTCAAAATTG-------------------------------------------------------------------------AAA--TTCGAAATTTTTTTGGACCCAACTTCTTTAAGCTC------------------------------------------------------------------------------AATCSizeHit CountTotal NormTotal
No Reads
droKik1
AAAA------AC----------------------------------------------------------------------------------------------------------------------------------T--AAT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGCAAACATGGGCAAACGAT--------------------------------GGGCAAACGATTCCAGCTTTCAAATTTC-------------------------------------------------------------------------GAAAA-AAA--ATTTTTCCGAACCTGGCTTCTCTGAGCTC------------------------------------------------------------------------------CAAASizeHit CountTotal NormTotal
No Reads
droAna3
TGGC------GGGGAGGTCTGGAAAACCCTCCAAA---ATATCCGAAGATGTTATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGGC------GGGAAGGTCTGGAAAACCCGCAAAA---ATATCCGAGGATATTATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droPer2
AGAG------CGGGCGGGCCGGCAAGCCGAAGAGCGTCATTTCCGAGGATCTTATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droVir3
TATATATATATA----------------------------------------------------------------------------------------------------------------------------------T--ATA-T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--ATATATATACATATAGTATATTTATATAT------------------------------------------------------------------------------ATATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AACG------AAAAA-----------------AGTAGTGTCTCTGAGGATACAATAGTAAGTAGTACAGTAGT-----AAGTAAACATGTA----------------------------------------------------------GTATTTACTTAAAATGAAAGATC-----------------AGCAAT------------------------------------------------------AGACAT----------------------------------------------------------------------------------------------------------------------------CCACTTCATAAATTTA-------------------------------------------------------------------------CAA--------------------------------------------------------------------------------------------------------------------ATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTG------TAAAGA------------------------------------------------TATATATTTATATATATTATATTTATATTATATATATATA----------------------------------------T--A-TTATATAT--------------------------------------------------------------------------------------------ATATATAT----------ATATTATATATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATTATATT------------------------------------------------------------------------------TAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:04 PM