ID:

dsi_26899

 Coordinate:

2l:6250147-6250351 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_6250352_6250708_-]; CDS [2l_6250352_6250708_-]; CDS [2l_6249675_6250146_-]; exon [2l_6249316_6250146_-]; intron [2l_6250147_6250351_-]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAGAGAAGGCGGTAAGTAAGATAGCATTCGGTAAATGTTATTATTCAGTTAACTGGATTGTCTCGATATCAATTTCAGTACGCTTATCTAAAGAGCCGCTAAACATTTAATCACAACAGGCTAATAATTGCTCATTAGATAAGAGTACTTGCATTAGCCTGAATAATTATAATGTTATTATGTTTACATGGTGTGAATACTTTTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA
**************************************************(((((((.((((((((........(((.(((((((((((((.(((((((.........)))))..(((((.(((((((((.((((.(((..................)))........)))).))))))))).)))))..)))))).))))))))).))))))))))).)))))))..((..((((........))))..))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
....................................ATTGAGAGAAGGCGGTAAGT......................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.........................ATCCGCATGACATTGAGAGAAGGC................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
.......TGCAAATGCCGGGAGTGGATCCGCA................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0
.............................................AGGCGGTAAGTAAGATAGC................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................GCTAAGTGAGCGCCTAAAGG............ 20 0 1 1.00 1 0 0 0 1 0 0 0
................CGGGAGTGGATCCGCATGACATTGA........................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................TCAGTACCCTTAGGTAAAGA............................................................................................................................................................................ 20 3 3 0.33 1 0 0 0 0 1 0 0
............................CTGGTGACATTGAGAGAAGG................................................................................................................................................................................................................................................................. 20 3 13 0.15 2 0 0 0 2 0 0 0
.............................................................................................................................TCTAAAGAGCCGTTGAAGA................................................................................................................................................................. 19 3 20 0.15 3 0 0 2 0 0 1 0
...........................................................................................................................................................................................................................TGTTTACGTGGTCTGATTACT................................................................. 21 3 7 0.14 1 0 0 0 0 0 1 0
...............................................................................TTATTCAGTTAAGCGGA................................................................................................................................................................................................................. 17 2 20 0.10 2 0 0 0 0 1 1 0
......................................................................................................................ACGATTATCTAAAGA............................................................................................................................................................................ 15 1 10 0.10 1 0 0 1 0 0 0 0
........................................................................................AAACTGGATTGTCTC.......................................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 1 0 0
.....................................................................................................................................................TGACAACAGGCTAAT............................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 0 1
...................................................................................ACAGAAAACTGGATTGTCT........................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1
...............................................CCGGTAAGTGAGATCGCA................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

CATAGCCACGTTTACGGCCCTCACCTAGGCGTACTGTAACTCTCTTCCGCCATTCATTCTATCGTAAGCCATTTACAATAATAAGTCAATTGACCTAACAGAGCTATAGTTAAAGTCATGCGAATAGATTTCTCGGCGATTTGTAAATTAGTGTTGTCCGATTATTAACGAGTAATCTATTCTCATGAACGTAATCGGACTTATTAATATTACAATAATACAAATGTACCACACTTATGAAAAGAAGCTAGGATCTGTTTAACGGAACTTCCGCGATTCACTCGCGGATTTCCGGTGCCTGAGGT
**************************************************(((((((.((((((((........(((.(((((((((((((.(((((((.........)))))..(((((.(((((((((.((((.(((..................)))........)))).))))))))).)))))..)))))).))))))))).))))))))))).)))))))..((..((((........))))..))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M053
female body
.................................................................AAGCCATTTACAATAATAAG............................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................ATCGGACTTATTAATATT.............................................................................................. 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................GTAAGTTAGTGTTGTCCGGTT.............................................................................................................................................. 21 2 2 0.50 1 0 0 0 1 0
.....................................................................................................................................................................................................................................................AGCTTGGATCTGTTT............................................. 15 1 8 0.38 3 0 0 3 0 0
....................................................................................................................................................................................................................................................AAGCTTGGATCTGTT.............................................. 15 1 8 0.25 2 0 0 2 0 0
............................................................................................................GTGAAAGTAATGCGAATA................................................................................................................................................................................... 18 2 19 0.05 1 0 0 0 0 1
....................................................................................................................................................................................................................................................AAGCTTGGATCTGTTTCTC.......................................... 19 3 20 0.05 1 0 0 1 0 0
....................................................................................................................................................................................................................................................AAGCTTGGATCTGTTTCT........................................... 18 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:6250097-6250401 - dsi_26899 GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAGAGAAGGCGGTAAGTAAGAT------AGCATT------CG-----------------GT---AAATGTTAT-T----ATTCAG--------------TTAACTGG-ATTGTCTCGATATCAATTTCAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CGC-TAAA---CATTTAATCACAACAGGC--------------------TAATAA--TT-GCTCATTAGATAAGAGTACTTG----------------CAT-T--------AGCCTGAATAATTATAATGTTATTATGTTTACATGG--------------------------------------------------------TG----TGAATACTT-TTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------
droSec2 scaffold_5:4524441-4524744 - GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAAAGAAGGCGGTAAGTAAGAT------AGCAAT------GG-----------------GT---AAATTTTAT-T----ATTCAG-------------TTTAACTGG-ATTGTCTCGATATCAATTTAAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CGC-TAAA---CATTTAATCACAACAGGC--------------------TAATAA--TT-GCTCATTAGATAAGAGTACTTG----------------CAT-T--------AGCCTGAATAATTA--ATGTTATTATGTTTACATGG--------------------------------------------------------TG----TGAATACTT-TTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------
dm3 chr2L:6475221-6475495 - GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAGAGAAGGCGGTAAGTAAGCT------AGCA----------------------------------------------------G-------------TTTAACTGG-ATTGTCTCGATATCAATTTAAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CAC-TAAA---CATTTAATCACAACAGGC--------------------TAATAA--TT-GCTCATTAGATAAGAGTTTTTG----------------CAT-T--------AGCCTAAATAATTA--------TAATGTTTACAT----------------------------------------------------------TG----TGATTTTTT-TTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------
droEre2 scaffold_4929:15383934-15384253 - der_1321 GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAAAGAAGGCGGTAAGTTAGAT------ATCATG------GG-----------------GT---AAATGTTAT-GTT-TACTTAGTCGTATTTTGGGGTTTAACTTG-ATTGTCTTGATATCAATGTAAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CAC-TAAC---CATTTAATCACAACAGGC--------------------TAATAA--TT-GTTCATTAGATAAGGGTACTTG----------------CAT-T--------AACTTGAATAATTAGTTTGTTATTATGTATACAT----------------------------------------------------------TA----TGAATACAT-TTCTTCAATTTCAGACAAATTGCCTTAAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------
droYak3 2L:6441411-6441736 + GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAAAGAAGGCGGTAAGTAAGATACTCGTAGCATT------GG-----------------GT---AAATGCTAT-GAT-TAATTAGTCGTATTTTGGGACTTAACTTA-ATTGTCTTGATATCAATTCCAGTA--------------------------------------------------CGCTTATCTAAAG------------AGG-CAC-TAAC---CATTTAATCAGAACAGGC--------------------TAATTA--TT-GTTCATTAGATAAGAGTACTAG----------------CAT-T--------AACATGAATAATTATTCTGGTATTATTAATACAT----------------------------------------------------------TA----TGAATTCCT-ATTCTTGATTTCAGACAAATTGCCCTAAAGGCGCTAAGTGAGCGGCTCAAGGCCACGGACTCCA-------------------------------------------------------
droEug1 scf7180000409463:1899780-1900096 - ATATCGGTGCAAATGCCGGGCGTGGATCCGCATGATATTGAGAGAAGGAGGTAAGTATAT--------GCGTT------AA-----------------GT---AAATATTGTTGCT-TAACCAGTATA-TTCATGGATTTGTA--AATCTTTCTTGATATCAATTTAAGTA--------------------------------------------------TGCTTATCTTAAG------------AAC-AAT-TTCG---CAATTAATCATAACAGCT--------------------AAATAA--TT-GTTCTTTAGATAAGCTCTCA--------------------ATT--ACT----GATCGAATA---AGTTCGTTTTTACGAACTTCT----------------------------------------------------------TATTAATGGTTGCGT-TTGTTTGGTTTTAGGCAAATTGCCTTGAAGGCGCTGAGCGAACGCTTGAAGGCGACGGACTCCA-------------------------------------------------------
droBia1 scf7180000302422:3000854-3001111 + ATATCGGTGCAAATGCCGGGCGTGGATCCGCATGATATCGAGCGAAGGCGGTGAGTATAA--------GTCCA------AG-----------------CT---AAATGATAT-GTT-TAATCAGTT--------------------------------------CTAACTA--------------------------------------------------TGCCTATCTAAAG------------ACCTCAT-TACC---TATTTAATGATTACAC-C--------------------TAATTA--TTGGTTCTTTAGATAGGCAGGCC------------------AAA-C----TATTGCCCCAGATA-----------------------------------------------------------------------------------C----TGACTATCT-TTGTTCTA-TTTAGACAAATTGCTTTGAAGGCGCTAAGCGAGCGCTTGAAGACCACGGACTCCA-------------------------------------------------------
droTak1 scf7180000415858:229988-230243 + ATATCGGTGCAAATGCCGGGCGTGGATCCGCATGATATCGAGCGAAGGCGGTAAGTATGAT------GGCC-T------A------------------GT---AATTGTTAT-GTT-TAATCAGCACT-TTTCTAGATT--------------TACATATCAATTTAAGTG--------------------------------------------------CGCTTATCTTAAG------------ACC-AAT-T---------------------------------------------GTTTG--TT-GTTCTCTAGATAAGCAA--TTT----------------TAA-T--------TGTTTGGGTAAT---------------------------------------------------------------------------------------GATTGTGTTTTCTTCGATTCTAGACAAATTGCTTTGAAGGCGCTAAGCGAGCGCCTAAAGGCCACGGACTCAA-------------------------------------------------------
droEle1 scf7180000490970:493457-493776 + ATATCGGTGCAAATGCCGGGCGTGGATCCGCACGATATTGAGCGAAGGCGGTAAGTCCAGT------GGCCTT------AG-----------------TT---AAATGTTAT-GTTTTTATCAGCTCC-TTA-CTGATTTGAGTTG-ATTGCCTCGATATCATTAT--GGG--------------------------------------------------TGCTTACCTACAG------------GAT-TTT-TAAATGTTGTTTAATCACAGCAATT--------------------GAA--ATTGT-ATTCTCTAGATAAGTGCGCA-------------------AT-T--AGT----GTGTGAACAGTGAATTAGTGTCTGACAACA-------------------------------TC--------------------------T-T---AATGACCACCA-TGACTCCGTTTCAGACAAATCGCATTGAAGGCCCTGAGCGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------
droRho1 scf7180000779524:171675-172008 - ATATCTGTGCAAATGCCGGGCGTGGATCCGCACGATATTGAGCGAAGGCGGTAAGTTCATA------AGTCGT------AG-----------------TT---AAATGTTAT-GCT-TATTAAG----------AGAGTTGAACTA-ATTGTCTCGATATCAATTTAATTAACTAAGTAACTTCAAGCTTTTTTAATAGTAGTTTTTATTTTTAATTATTTTGACTTTCAAAAG------------GGG-CTG-TAC-------TTAAA-------------------------------AAAAA--TG-GTTCAATGG--------------------------------------------------------------------GCTTACACGGGTATCTAAAATAGATTAACAGCAAAATT--------------------------T-T---AATGAATACCC-TTGATCGGTTTCAGACAAATCGCGTTGAAGGCACTGAGCGAGCGTTTAAAAGCCACGGACTCCA-------------------------------------------------------
droFic1 scf7180000453973:75146-75486 + ATATCGGTGCAAATGCCGGGCGTGGATCCGCACGACATTGAGCGAAGGCGGTGAGTAAAGA------G--TGT------AG-----------------CT---AAATGATGT-TTT-T-ATCAGCAAT-TTTCCGGATTTGACTTT-ATTACCTCCATATCAGTTTAAGT----------------------------------------------------GCCTAACTTTAGGGGTGTTTAAAGAA------TAAT---TATTTAATCAAAACGACT--------------------AACTAA--TT-GTTTATAAGATAAGAATATTGG----------------TA-----------------AACAATGATTTTGGGCTTTATAAAT-------------------------------TATTAATGATTAATTATTAATATTAATTTTTA----TCAATTTTT-TTTTTTGCTTTCAGTCAAATTGCCTTAAAGGCGCTCAGCGAGCGCTTGAAGGCCACGGACTCCA-------------------------------------------------------
droKik1 scf7180000302590:39783-40086 - ATCTCGGTGCAAATGCCAGGAGTTGATCCGCACGATATTGAACGAAGACGGTAAGTAAAAT------TAAATT------GG--------------------------------------------------------------------------GATAACCATAACAAGA--------------------------------------------------AGCGTTTTTGAAG------------ATA-CATATATA---CATTCCTTCTGTACAATTAATATAATTTGGAAAAGGTATTATAA--C--TTTTGTCAGATGAAAGTATTCTTTGATGGAGTTTATTATTT-TTAATT----TATTAAATAAT----TTTTTTATTTTAATTAAT----------------------------------------------------------TA----TTAATTGAT-TT-CTTTTTTGTAGACAAATCGCTTTGAAGGCTTTGAGCGAACGATTGAAGGCCACGGACGCAA-------------------------------------------------------
droAna3 scaffold_12943:2718898-2718998 + TGAAT------------------------------------------------------------------------AGAAATAAATGCATAAACTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTGCCATTATTTTATTTTTAGACAAATTGCATTGAAGGCTCTGAGTGAACGGCTTAAGGCCACGGACTCCA-------------------------------------------------------
droBip1 scf7180000396535:2116713-2116818 + ATATCCGTACAAATGCCGGGAGTAGATCCGCACGATATTGAGCGTAGGCGGTAAGTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAATAAATG----------------CAA-T--------AAC-TCAGTGATTACCATAATGTTATTTTTA------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------
dp5 4_group1:1525976-1526051 - T----GTTCTAAATATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGCTTCCAGACAAATTGCTTTGAAGGCTTTGAGTGAACGCTTGAAGGCCACCGATTCCA-------------------------------------------------------
droPer2 scaffold_5:3680916-3680991 + T----GTTCTAAATATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGCTTCCAGACAAATTGCTTTGAAGGCTTTGAGTGAACGCTTGAAGGCCACCGATTCCA-------------------------------------------------------
droWil2 scf2_1100000004884:578656-578751 - ATAATGCTATAATCATTCGGTATTTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT-TATTTATATTTCAGACAAATCGCTCTAAAGGCTTTAAGCGAGCGATTGAAGGCCACGGATTCCA-------------------------------------------------------
droVir3 scaffold_12723:4481963-4482182 - GTCTCTGTGCAGATGCCCGGCGTGGATCCGCATGATATTGAGCGCAGGCGGTAAGCTAATT------AATCCTGTTTATAAACGTCTTATAAAACTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG--AACGTTAAACAATCAGACAAATTGCGCTAAAGGCACTTAGCGAACGCCTAAAGGCCACTGACTCGACGCGTCATGCACAACTGCCGAAGTCGTTTCCTCAGCAGCAACAGCAACAACATCA
droMoj3 scaffold_6500:7576299-7576354 + GTATCGGTGCAAATGCCTGGAGTGGATCCGCATGATATTGAGCGCAGGCGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:3436130-3436250 - GTCTCCGTGCAGATGCCCGGAGTGGATCCACATGATATTGAGCGCAGGCGGTGAGTAATGT------A--------TATAAATGTTTTGAAATATCCTTTGATGAACAT--T-T----GTTTAA--------------TTA---------ATCTCGATAAAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAGAGAAGGCGGTAAGTAAGAT------AGCATT------CG-----------------GT---AAATGTTAT-T----ATTCAG--------------TTAACTGG-ATTGTCTCGATATCAATTTCAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CGC-TAAA---CATTTAATCACAACAGGC--------------------TAATAA--TT-GCTCATTAGATAAGAGTACTTG----------------CAT-T--------AGCCTGAATAATTATAATGTTATTATGTTTACATGG--------------------------------------------------------TG----TGAATACTT-TTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................ATTGAGAGAAGGCGGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.........................ATCCGCATGACATTGAGAGAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.......TGCAAATGCCGGGAGTGGATCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.............................................AGGCGGTAAGTAAGAT------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGTGAGCGCCTAAAGG...................................................................2011.00100000000000100000
................CGGGAGTGGATCCGCATGACATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000100000000000
droSec2
GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAAAGAAGGCGGTAAGTAAGAT------AGCAAT------GG-----------------GT---AAATTTTAT-T----ATTCAG-------------TTTAACTGG-ATTGTCTCGATATCAATTTAAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CGC-TAAA---CATTTAATCACAACAGGC--------------------TAATAA--TT-GCTCATTAGATAAGAGTACTTG----------------CAT-T--------AGCCTGAATAATTA--ATGTTATTATGTTTACATGG--------------------------------------------------------TG----TGAATACTT-TTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........AAATGCCGGGAGTGGATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................ATGACATTGAAAGAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........AAATGCCGGGAGTGGATCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAGAGAAGGCGGTAAGTAAGCT------AGCA----------------------------------------------------G-------------TTTAACTGG-ATTGTCTCGATATCAATTTAAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CAC-TAAA---CATTTAATCACAACAGGC--------------------TAATAA--TT-GCTCATTAGATAAGAGTTTTTG----------------CAT-T--------AGCCTAAATAATTA--------TAATGTTTACAT----------------------------------------------------------TG----TGATTTTTT-TTCTTCGATCCTAGACAAATTGCCTTGAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTGAGCGCCTAAAGGCCA................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.......TGCAAATGCCGGGAGTGGATCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGCCTAAAGGCCACGGACTCC........................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGGGAGTGGATCCGCATGACATTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGTGAGCGCCTAAA.....................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTGAGCGCCTAAAGGCCACGGACT..........................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGACATTGAGAGAAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGCAAATGCCGGGAGTGGATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000
...TCGGTGCAAATGCCGGGAGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TCTAAAG------------AGC-CAC-TAAA---CATT...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGTGGATCCGCATGACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AATGCCGGGAGTGGATCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGCATGACATTGAGAGAAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATTGCCTTGAAGGCGC.....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTTGAAGGCGCTAAGTGAGCGA..........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCTAAAGGCCACGGACT..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........AAATGCCGGGAGTGGATCCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTGAAGGCGCTAAGTGAGCG...........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........GCAAATGCCGGGAGTGGATCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TATCGGTGCAAATGCCGGGAGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGTGAGCGCCTAAAGGCCACG..............................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGGTGCAAATGCCGGGAGTGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GTGCAAATGCCGGGAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCCTTGAAGGCGCTAAGTG...............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......GTGCAAATGCCGGGAGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCGCATGACATTGAGAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................ATGACATTGAGAGAAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CAAATGCCGGGAGTGGATCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................CGCATGACATTGAGAGAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............TGCCGGGAGTGGATCCGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCCGGGAGTGGATCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGGCGCTAAGTGAGC............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGGGAGTGGATCCGCATGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................GTGGATCCGCATGACATTGAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAAGGCGCTAAGTTT..............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGCCTAAAGGCCACGGACT..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGTGAGCGCCTAAAGGCC.................................................................2211.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAAAGAAGGCGGTAAGTTAGAT------ATCATG------GG-----------------GT---AAATGTTAT-GTT-TACTTAGTCGTATTTTGGGGTTTAACTTG-ATTGTCTTGATATCAATGTAAGTA--------------------------------------------------CGCTTATCTAAAG------------AGC-CAC-TAAC---CATTTAATCACAACAGGC--------------------TAATAA--TT-GTTCATTAGATAAGGGTACTTG----------------CAT-T--------AACTTGAATAATTAGTTTGTTATTATGTATACAT----------------------------------------------------------TA----TGAATACAT-TTCTTCAATTTCAGACAAATTGCCTTAAAGGCGCTAAGTGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....CGGTGCAAATGCCGGGAGTGGATCCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
......GTGCAAATGCCGGGAGTGGATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...........................CCGCATGACATTGAAAGAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
droYak3
GTATCGGTGCAAATGCCGGGAGTGGATCCGCATGACATTGAAAGAAGGCGGTAAGTAAGATACTCGTAGCATT------GG-----------------GT---AAATGCTAT-GAT-TAATTAGTCGTATTTTGGGACTTAACTTA-ATTGTCTTGATATCAATTCCAGTA--------------------------------------------------CGCTTATCTAAAG------------AGG-CAC-TAAC---CATTTAATCAGAACAGGC--------------------TAATTA--TT-GTTCATTAGATAAGAGTACTAG----------------CAT-T--------AACATGAATAATTATTCTGGTATTATTAATACAT----------------------------------------------------------TA----TGAATTCCT-ATTCTTGATTTCAGACAAATTGCCCTAAAGGCGCTAAGTGAGCGGCTCAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................CGCATGACATTGAAAGAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................AAGAAGGCGGTAAGTAAGATACTCGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
................................TGACATTGAAAGAAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTGAGCGGCTCAAGGCCACGGA............................................................2611.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGCGCTAAGTGAGCGGCTCAAGGC..................................................................2911.00100000010000
droEug1
ATATCGGTGCAAATGCCGGGCGTGGATCCGCATGATATTGAGAGAAGGAGGTAAGTATAT--------GCGTT------AA-----------------GT---AAATATTGTTGCT-TAACCAGTATA-TTCATGGATTTGTA--AATCTTTCTTGATATCAATTTAAGTA--------------------------------------------------TGCTTATCTTAAG------------AAC-AAT-TTCG---CAATTAATCATAACAGCT--------------------AAATAA--TT-GTTCTTTAGATAAGCTCTCA--------------------ATT--ACT----GATCGAATA---AGTTCGTTTTTACGAACTTCT----------------------------------------------------------TATTAATGGTTGCGT-TTGTTTGGTTTTAGGCAAATTGCCTTGAAGGCGCTGAGCGAACGCTTGAAGGCGACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATATCGGTGCAAATGCCGGGCGTGGATCCGCATGATATCGAGCGAAGGCGGTGAGTATAA--------GTCCA------AG-----------------CT---AAATGATAT-GTT-TAATCAGTT--------------------------------------CTAACTA--------------------------------------------------TGCCTATCTAAAG------------ACCTCAT-TACC---TATTTAATGATTACAC-C--------------------TAATTA--TTGGTTCTTTAGATAGGCAGGCC------------------AAA-C----TATTGCCCCAGATA-----------------------------------------------------------------------------------C----TGACTATCT-TTGTTCTA-TTTAGACAAATTGCTTTGAAGGCGCTAAGCGAGCGCTTGAAGACCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATATCGGTGCAAATGCCGGGCGTGGATCCGCATGATATCGAGCGAAGGCGGTAAGTATGAT------GGCC-T------A------------------GT---AATTGTTAT-GTT-TAATCAGCACT-TTTCTAGATT--------------TACATATCAATTTAAGTG--------------------------------------------------CGCTTATCTTAAG------------ACC-AAT-T---------------------------------------------GTTTG--TT-GTTCTCTAGATAAGCAA--TTT----------------TAA-T--------TGTTTGGGTAAT---------------------------------------------------------------------------------------GATTGTGTTTTCTTCGATTCTAGACAAATTGCTTTGAAGGCGCTAAGCGAGCGCCTAAAGGCCACGGACTCAA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATATCGGTGCAAATGCCGGGCGTGGATCCGCACGATATTGAGCGAAGGCGGTAAGTCCAGT------GGCCTT------AG-----------------TT---AAATGTTAT-GTTTTTATCAGCTCC-TTA-CTGATTTGAGTTG-ATTGCCTCGATATCATTAT--GGG--------------------------------------------------TGCTTACCTACAG------------GAT-TTT-TAAATGTTGTTTAATCACAGCAATT--------------------GAA--ATTGT-ATTCTCTAGATAAGTGCGCA-------------------AT-T--AGT----GTGTGAACAGTGAATTAGTGTCTGACAACA-------------------------------TC--------------------------T-T---AATGACCACCA-TGACTCCGTTTCAGACAAATCGCATTGAAGGCCCTGAGCGAGCGCCTAAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATATCTGTGCAAATGCCGGGCGTGGATCCGCACGATATTGAGCGAAGGCGGTAAGTTCATA------AGTCGT------AG-----------------TT---AAATGTTAT-GCT-TATTAAG----------AGAGTTGAACTA-ATTGTCTCGATATCAATTTAATTAACTAAGTAACTTCAAGCTTTTTTAATAGTAGTTTTTATTTTTAATTATTTTGACTTTCAAAAG------------GGG-CTG-TAC-------TTAAA-------------------------------AAAAA--TG-GTTCAATGG--------------------------------------------------------------------GCTTACACGGGTATCTAAAATAGATTAACAGCAAAATT--------------------------T-T---AATGAATACCC-TTGATCGGTTTCAGACAAATCGCGTTGAAGGCACTGAGCGAGCGTTTAAAAGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATATCGGTGCAAATGCCGGGCGTGGATCCGCACGACATTGAGCGAAGGCGGTGAGTAAAGA------G--TGT------AG-----------------CT---AAATGATGT-TTT-T-ATCAGCAAT-TTTCCGGATTTGACTTT-ATTACCTCCATATCAGTTTAAGT----------------------------------------------------GCCTAACTTTAGGGGTGTTTAAAGAA------TAAT---TATTTAATCAAAACGACT--------------------AACTAA--TT-GTTTATAAGATAAGAATATTGG----------------TA-----------------AACAATGATTTTGGGCTTTATAAAT-------------------------------TATTAATGATTAATTATTAATATTAATTTTTA----TCAATTTTT-TTTTTTGCTTTCAGTCAAATTGCCTTAAAGGCGCTCAGCGAGCGCTTGAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATCTCGGTGCAAATGCCAGGAGTTGATCCGCACGATATTGAACGAAGACGGTAAGTAAAAT------TAAATT------GG--------------------------------------------------------------------------GATAACCATAACAAGA--------------------------------------------------AGCGTTTTTGAAG------------ATA-CATATATA---CATTCCTTCTGTACAATTAATATAATTTGGAAAAGGTATTATAA--C--TTTTGTCAGATGAAAGTATTCTTTGATGGAGTTTATTATTT-TTAATT----TATTAAATAAT----TTTTTTATTTTAATTAAT----------------------------------------------------------TA----TTAATTGAT-TT-CTTTTTTGTAGACAAATCGCTTTGAAGGCTTTGAGCGAACGATTGAAGGCCACGGACGCAA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TGAAT------------------------------------------------------------------------AGAAATAAATGCATAAACTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTGCCATTATTTTATTTTTAGACAAATTGCATTGAAGGCTCTGAGTGAACGGCTTAAGGCCACGGACTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGGCTCTGAGTGAAC............................................................................2012.002000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGCATTGAAGGCTCTGAGT................................................................................2411.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATTGCATTGAAGGCTC.....................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATTGCATTGAAGGCTCTGAGT................................................................................2611.001001000
droBip1
ATATCCGTACAAATGCCGGGAGTAGATCCGCACGATATTGAGCGTAGGCGGTAAGTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAATAAATG----------------CAA-T--------AAC-TCAGTGATTACCATAATGTTATTTTTA------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
T----GTTCTAAATATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGCTTCCAGACAAATTGCTTTGAAGGCTTTGAGTGAACGCTTGAAGGCCACCGATTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
T----GTTCTAAATATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGCTTCC...........................................................................................................2411.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTGAAGGCTTTGAGT................................................................................1911.0010100000000
droPer2
T----GTTCTAAATATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGCTTCCAGACAAATTGCTTTGAAGGCTTTGAGTGAACGCTTGAAGGCCACCGATTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATAATGCTATAATCATTCGGTATTTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT-TATTTATATTTCAGACAAATCGCTCTAAAGGCTTTAAGCGAGCGATTGAAGGCCACGGATTCCA-------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GTCTCTGTGCAGATGCCCGGCGTGGATCCGCATGATATTGAGCGCAGGCGGTAAGCTAATT------AATCCTGTTTATAAACGTCTTATAAAACTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG--AACGTTAAACAATCAGACAAATTGCGCTAAAGGCACTTAGCGAACGCCTAAAGGCCACTGACTCGACGCGTCATGCACAACTGCCGAAGTCGTTTCCTCAGCAGCAACAGCAACAACATCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........AGATGCCCGGCGTGGATCCGCATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000004
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCCTCAGCAGCAACAGCAACAA.....2611.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAAAGGCCACTGACTCGACGC....................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACAACTGCCGAAGTCGTTTCCTCAG....................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTTCCTCAGCAGCAA..............1911.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGTCGTTTCCTCAGCAGC................2111.001000000000000000000000000000000000000000100000000000000000000000
..CTCTGTGCAGATGCCCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCTCAGCAGCAACAG...........1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAGGCACTTAGCGAAC............................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...............................ATGATATTGAGCGCAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGCGTCATGCACAAC........................................1811.001000000000000000000000000000000000000001000000000000000000000000
..........AGATGCCCGGCGTGGATCCGCATGATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCTCAGCAGCAACA............1811.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAACAACATC.22110.091001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAACAACAT..21140.071000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAACAACATC.19200.051000000000000000000000010000000000000000000000000000000000000000
droMoj3
GTATCGGTGCAAATGCCTGGAGTGGATCCGCATGATATTGAGCGCAGGCGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................CATGATATTGAGCGCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............ATGCCTGGAGTGGATCCGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...TCGGTGCAAATGCCTGGAGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
GTCTCCGTGCAGATGCCCGGAGTGGATCCACATGATATTGAGCGCAGGCGGTGAGTAATGT------A--------TATAAATGTTTTGAAATATCCTTTGATGAACAT--T-T----GTTTAA--------------TTA---------ATCTCGATAAAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................TGATATTGAGCGCAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 05:01 PM