ID:

dsi_26872

Coordinate:

2r:9495870-9496019 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [2r_9496020_9496764_+]; exon [2r_9496020_9496883_+]; intron [2r_9495437_9496019_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAGCAGCCTGGCATTTGTGCTGAACTGTTGGACTCGACTTTCTGATAAACCCTCCAATAGCGATAATAATGTGATTTTGGGTCAAATTGATAGAGATGCAGTGTATTTATGGCCAGCAAGTGTATTAATATTGGATAAGAAATCAATCCAGTGGATGTTATTTCCGTACTAACCACTCATATCCCTTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCGCAGCACGTGACCCAGCGACATG
**************************************************....................(((((....((((((((..((((....((.((((....(((((.....(((((.((...((((((((.........))))))))...)))))))))))).....))))))))))..))))))))))))).**************************************************
Read size # Mismatch Hit Count Total Norm Total M025
embryo
M024
male body
GSM343915
embryo
SRR618934
dsim w501 ovaries
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
M023
head
M053
female body
..........GGCATTTGTGCTGAACTGTTGGACTCGA.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................ATATCCCTTTGGTCATTGCTGA................................................. 22 3 2 1.00 2 0 0 0 2 0 0 0 0
..............................................................................................................................................................................................................CGACACCTTGGATGCACTG......................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................TGGACTCGACTTTCTGAT........................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................GGGAGATGCAGTGTATTTA............................................................................................................................................ 19 2 1 1.00 1 0 0 1 0 0 0 0 0
..........GGCATTTGTGCTGAACTGTTGGA......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................ATTGAGATGCAGTGTATG.............................................................................................................................................. 18 2 14 0.14 2 0 1 0 0 0 0 1 0
............................................................GCGATACTAATGTGA............................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................GATAGAGTTTTCGACACCTT................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0
.............................................................................................................................TTAAAATTGGATAAGA............................................................................................................. 16 1 8 0.13 1 0 0 0 0 0 1 0 0
..........................................................................................AGAGATATGCAGTGTATGTA............................................................................................................................................ 20 3 13 0.08 1 0 0 1 0 0 0 0 0
.................................................................................................................................TATTAGATAAAAAATCAAT...................................................................................................... 19 2 18 0.06 1 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................TGGTAGAGCTTTCGACACC..................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

GGTCGTCGGACCGTAAACACGACTTGACAACCTGAGCTGAAAGACTATTTGGGAGGTTATCGCTATTATTACACTAAAACCCAGTTTAACTATCTCTACGTCACATAAATACCGGTCGTTCACATAATTATAACCTATTCTTTAGTTAGGTCACCTACAATAAAGGCATGATTGGTGAGTATAGGGAAACTAGGAACGTCTCAAAAGCTGTGGAACCTACGTGACCGCGTCGTGCACTGGGTCGCTGTAC
**************************************************....................(((((....((((((((..((((....((.((((....(((((.....(((((.((...((((((((.........))))))))...)))))))))))).....))))))))))..))))))))))))).**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
M024
male body
SRR902009
testis
SRR618934
dsim w501 ovaries
SRR553487
NRT_0-2 hours eggs
SRR902008
ovaries
SRR553488
RT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
................................................TTGGGAGGTTGTCGC........................................................................................................................................................................................... 15 1 4 0.50 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTCTCAGCACCTGTGGAACC................................. 21 3 2 0.50 1 0 1 0 0 0 0 0 0
.....................ACTAGACAGCCTGAGCTGTAA................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TCATGATTGGTGAGTA..................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................AGCTGTGGAACCTTCG............................. 16 1 4 0.25 1 0 0 0 0 1 0 0 0
.................CACGACTTGACAAGCTGACG..................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 1 0 0
..................................................................................................................................TCACATATTGTTTAGTTAGGT................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAGCGATGGAACCTAC.............................. 17 2 13 0.08 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................................ATGATTGGTGATGATAG.................................................................. 17 2 15 0.07 1 0 0 0 1 0 0 0 0
........................................AAGAGTTTTTGGGACGTTAT.............................................................................................................................................................................................. 20 3 16 0.06 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................TAGGATAACTAGGAACG.................................................... 17 2 16 0.06 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:9495820-9496069 + dsi_26872 CCA---GCAGCC------TGGCATTTG----------------TGCTGAACTGTTGGACTCGAC--TTTCTGATAAACCC---TCCA-------------ATA-GCGATAATAATGTGAT--TTTGGGTCAAATTGATAGAGATGCA-GTGT----ATTTATGGCCAGCAAGTGTA-T----TAATATTGGAT--------------A-------------------------AGAA-ATCAATCC---------------------------------AGT----GGATGTTATTTCC--GTACTAACCACTCATATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCGCAGCACGTGACCCAGCGACATG
droSec2 scaffold_1:6333013-6333262 + dse_663 ACA---GCAGCC------TGTCATTTG----------------TGCTGAACTGTTGGACTCGAC--TTTCTGATAAACCC---TCCA-------------ATA-GCGATAATAATGTGAT--TTTGGGTCAAATTGACAGAGATGCA-GTGT----ATTTATGGTCAGCAAGTGTA-T----TAATATTGGAT--------------A-------------------------AGAA-ATCAATTC---------------------------------AGT----ATATGTTATTTCC--GTACTAACCACTCATATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGAAGCACTGGCGCAGCACGTGACCCAGCGACATG
dm3 chr2R:8817085-8817338 + CCGGAGGCAGCC------TGGCATT------------------TGCTGAACTGTTGGACTCGAC--TTTTTGATAAACCC---TCCA-------------ATA-GCGATAATAATGTGAT--TTTGGGTCAAATTGATAGAGATGCA-GTGTA-TTGTTTATGGTCAGCAAGTGTA-T----TAATATTGGAT--------------A-------------------------AGAA-ATCAATCC---------------------------------AGT----ACATGTTATTTTC--GTACTAACCACTTATATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCACAGCACGTGACCCAGCGACATG
droEre2 scaffold_4845:17006791-17007005 - CGA---GCAGGC------TGGAATT------------------TCTAGAACTGTTGGACTCGCCGACTTCTGATAAAAAAAAAACCA-------------ATA-GCGATAA---TATGAT--TTTGGGTCAAATTA--------------------------------------TA-TTGGGTAATTTTGGAT--------------A-------------------------CGAA-ATCAAACC---------------------------------TCT---------TTATATCC--GTAGTAACCAACGAAATC-C---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCCCTGGCGCAGCACGTGACCCAGCGACATG
droYak3 2R:8152373-8152614 - CCA---GCAGAA------TGGAATT------------------TGTTGAACAGTTGGACTCGAC--TTTCTGATAAACCA---GGCA-------------ATA-TTG---ATAATATGAT--TTTGGGTCAAATTGATAGAGATAAA-TTGT----ATTTATGGCCAGCAAATGCA-A----TAATTTTGGAT--------------A-------------------------AGCA-ATCGAACC---------------------------------ACA---------ATATTTCAGTGTACTAACCAACGAAATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCACAGCACGTGACCCAGCGACATG
droEug1 scf7180000409672:3816235-3816506 - CCA---GCAGCC------TGGTATA----TACATATATG----TATTGAACTTTTGGACTGGAC--TTTCTGATAAACCC--------------CATCGAATA-GCGATAAAAATATGAT--TTTGGGTCAAATTGATAAGGATAAA-ATGTAATAATTTATAGCCAGGAAAAATATT----TGATTTTGGAT--------------AAATTATATATGATAAACATTACAATAATTTG--------------------------------------------------------CCCC--TTACTAGTCAATAAAATCCT---TCTGATCATTACAGGGTTTTCGACACTCTGGAGGCACTGGCTCAGCACGTGACCCAGCGACATG
droBia1 scf7180000302292:1862757-1862986 + AT--------------------ATT------------------TGTTGAACTGTTGGACTGAGC--TTTCTGATAAACCA--------------------GTT-GCGATAATAATATGAT--ATTGGGTCAAATTGATAGGAATAAT-AC----AA----------AGGGATAGTCTA----AGATTTCGGAT--------------AAAACATATATGATA-----------AGAAAATCA--------------------------------------------GCATGGTTTTTCC--CTATTAACCCGAAATATT-A---TCTGCT-TTTGCAGGGTTTTCGACACACTGGAGGCCCTGGCGCAGCACGTGACCCAGCGACATG
droTak1 scf7180000415762:317202-317474 - CCA---GCAGCC------TGCTACTCGTATTCGTATTCGTATTCGTTGAACTGTTGGACTGGAC--TTTCTGATAAACCA---AG--TTGTATTCACCGCATA-CCGATAATAATGTGAT--TTTGGGTCAAAGTGATAGGGATAAA-ATA---TAATTTATGGCCAGGAAAATGATT----TGATTTTGGAT--------------A-------------------------CCAT-TGT-----------------------------------------TTACCATT-ATTTTTCC--CCATTAACCCCGAATATC-C---TTTGGTCATTGCAGGGTTTTCGACACTCTGGAGGCTCTGGCGCAGCACGTGACCCAGCGACATG
droEle1 scf7180000491215:226457-226754 - CCA---GCAGCC------TGGTTTTTG----------------T-TTGAACTGTTGGACTGGAC--TTTCTGATAAACAA---G---TTGGATACATCGAATA-GCGATAATAATATGAT--TTTGGGTCAAAATGATAGGACTAAA-TTC---GAATTTATGGTCAGGGAAATGATA----TGATTTGGG-------------GATAAATTTGATATGATAAAGATAC------TTTT-CAAGGCAAAAA----------------TACATGTATATT---TAACTTATATTG-TTCT--TCACTAAAGTTCGATTTTCC---TCTGATCATTACAGGATTTTCGACACATTGGAGGCACTGGCGCAGCACGTGACCCAGCGGCACG
droRho1 scf7180000779957:79628-79941 - CCA---GCAGCC------TGGTAAT------------------TCTTGAACTCATGGACTGGAC--TTTCTGATAAACAA---G---TTGTATGTATCGAATA-GCGATAATAATATGATTTTTTGGGTCAAATTGATAGGACTAAA-TA----AAATTTATGGTCAGAAATATGATT----TGATTTTGGAT--------------AAATTGTATATGAAAAAGATTA------TTTG-TAATGCATAAAATATGTACATAGATATTATATATATATT---TTACGAATGTTGTTCCC--TTACTAAAGTCCGATTTTTA---TCTGATCATTACAGAGTTTTCGACACACTGGAGGCCCTTGCACAGCACGTGACCCAGCGACATG
droFic1 scf7180000454066:459977-460262 - GCA---GCAGCC------TGGTATT------------------TGTTGAGCTCTTGGACTGAAC--TTTTTGATTAACCA---G------TACGCATTA-ATACGCGATAATAATATGACA-TTTGGGTCAATACGATAGGGCTTAA-ATA---TTATTTATGGCTAAGAACGGTATT----TGATTTTGGATCGTATTTACGAGATAATATTCATTTGATA-----------AAATTGCCAATAA-------------------------------------AACGAATGATT-TTCA--TAACTAACCACTGATTTTGT---TCTGATCATTGCAGAGTTTTTGACACACTGGAGGCACTGGCTCAACACGTGACCCAGAGACACG
droKik1 scf7180000302670:245585-245863 + CCA---GCAGCCGTTGTCTGGAAAC------------------GGCTGAACTTGTGGACTGAAC--TTTGTGATAAAGCT---T---TTGTGTGGATTC-ATA-GCGATAATAATACAAT--TTTAGATCAAAGTAATAAGGCCAAAAATC---TATTTAATAGCCAAGATAAACA-G----TAA--TTGGAT--------------AAAT----------------------AGAA-CTTAACGCTAAAGAAATATACTT----------------------TTTAAAC-----ACCT--TTACTTACGTGCAATTCTCCGTTTCTCCTCTTTACAGGGTCTTTGACACACTGGAGGCCCTTGCCCAGCACGTCACCCAGCGACATG
droAna3 scaffold_13266:6285877-6285958 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACTTAAAATTTCCC----TTTTTAATTACAGAATTTTTGACACACTGGAGGCCTTGGCCCAGCACGTCACCCAGAGGCATG
droBip1 scf7180000395839:442949-443028 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACCTTAAATTTTCC---TT---TTTTTACAGAATTTTTGACACACTTGAGGCTTTGGCCCAGCACGTCACCCAGAGGCATG
dp5 3:14342531-14342586 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGGTATTCGAAACACTGGAAGCTCTGGCCCAACACGTCACGCAGAGGCATG
droPer2 scaffold_4:975074-975129 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGGTATTCGAAACACTGGAAGCTCTGGCCCAACACGTCACGCAGAGGCATG
droWil2 scf2_1100000004510:1080890-1080940 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCTTTGAGACACTTGAGGCGCTGGCTCAACATGTCACCCAGAGGCATG
droVir3 scaffold_12875:554232-554286 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGAGTTTTTGAATCTTTGGAGGCGCTGGCACAACACGTCACCTTACGTCATG
droMoj3 scaffold_6496:3554761-3554828 + TCG---CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTCTTGCAGAGTTTTCGAGTCCCTGGAGGCGCTCGCACAACATGTCACATTACGTCACG
droGri2 scaffold_15245:10409903-10409983 - GTA---C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTAGTTATCTCTT---TT---GGCTTGCAGAGTTTTCGAATCTTTGGAGGCACTCGCCCAACATGTCACTCTGCGTCATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCA---GCAGCC------TGGCATTTG----------------TGCTGAACTGTTGGACTCGAC--TTTCTGATAAACCC---TCCA-------------ATA-GCGATAATAATGTGAT--TTTGGGTCAAATTGATAGAGATGCA-GTGT----ATTTATGGCCAGCAAGTGTA-T----TAATATTGGAT--------------A-------------------------AGAA-ATCAATCC---------------------------------AGT----GGATGTTATTTCC--GTACTAACCACTCATATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCGCAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...................GGCATTTG----------------TGCTGAACTGTTGGACTCGA.....................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................CGACACCTTGGATGCACTG.........................1911.00100100000000000000
......................................................TGGACTCGAC--TTTCTGAT..........................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...................GGCATTTG----------------TGCTGAACTGTTGGA..........................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
droSec2
ACA---GCAGCC------TGTCATTTG----------------TGCTGAACTGTTGGACTCGAC--TTTCTGATAAACCC---TCCA-------------ATA-GCGATAATAATGTGAT--TTTGGGTCAAATTGACAGAGATGCA-GTGT----ATTTATGGTCAGCAAGTGTA-T----TAATATTGGAT--------------A-------------------------AGAA-ATCAATTC---------------------------------AGT----ATATGTTATTTCC--GTACTAACCACTCATATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGAAGCACTGGCGCAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.........................................................................................................................................................................................................................................................................................................................................................GACACCTTGGAAGCACTGGC.......................2012.0020020
.....................................................................................................................................................................................................................................................................................................................................................TTTCGACACCTTGGAAGCACT..........................2111.0010010
.....................................................................................................................................................................................................................................................................................................................................................TTTCGACACCTTGGAAGCA............................1911.0010010
.............................................................................................................AATAATGTGAT--TTTGGGT...................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................GACACCTTGGAAGCACTGG........................1911.0010010
......................................................................................................................................................................................................................................................................................................................................................TTCGACACCTTGGAAGCACTGGC.......................2311.0010010
dm3
CCGGAGGCAGCC------TGGCATT------------------TGCTGAACTGTTGGACTCGAC--TTTTTGATAAACCC---TCCA-------------ATA-GCGATAATAATGTGAT--TTTGGGTCAAATTGATAGAGATGCA-GTGTA-TTGTTTATGGTCAGCAAGTGTA-T----TAATATTGGAT--------------A-------------------------AGAA-ATCAATCC---------------------------------AGT----ACATGTTATTTTC--GTACTAACCACTTATATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCACAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...........................................................................................................................................GAGATGCA-GTGTA-TTGTG.....................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................ATATCCC---TTTGATCCTTGCAG..................................................2114.0040000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000010
.............................................................................................................................................................................................................................................................................................................................TCCC---TTTGATCCTTGCAG..................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000
...........................................................................................................................................GAGATGCA-GTGTA-TTGTTTATGG................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000
..................TGGCATT------------------TGCTGAACTGTTGG...........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AAATTGATAGAGATGCA-GTGTA-TTGTT.....................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GTCAGCAAGTGTA-T----TAATATTGGAT--------------.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................ATTGATAGAGATGCA-GTGTA-TTG.......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................GCAAGTGTA-T----TAATATTGGAT--------------A-------------------------...........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................ATATCCC---TTTGATCCTTGCA...................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTATATCCC---TTTGATCCTTG.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GATAATAATGTGAT--TTTGGGT...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AGAGATGCA-GTGTA-TTGTT.....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................AAATTGATAGAGATGCA-GTGTA-TTG.......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................GATAGAGATGCA-GTGTA-TTGTTTAT..................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CACAGCACGTGACCCAGCGAC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................TTTATGGTCAGCAAGTGTA-...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................CACCTTGGATGCACTGGC.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AGAA-ATCAATCC---------------------------------AGT----ACATG.................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GATGCA-GTGTA-TTGTTTATGGTC..............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................ATGGTCAGCAAGTGTA-T----TAATATTG......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................TTGATAGAGATGCA-GTGTA-TTGTT.....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................AGAGATGCA-GTGTA-TTGTTTATG.................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................GATAGAGATGCA-GTGTA-A.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................AGCAAGTGTA-T----TAATATTGG.....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GTTTTCGACACCTTGGATGCACTGG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GTCAAATTGATAGAGATGC..................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
CCGGAGGCAGCC------TGGCATT------------------TGCTGAA..................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CATT------------------TGCTGAACTGTTGGACTCGAC--T.................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TGATAGAGATGCA-GTGTA-TTGTTTATG.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................GTGTA-T----TAATATTGGAT--------------A-------------------------AGTT-......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................CGACACCTTGGATGCACTGGCA......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................AGATGCA-GTGTA-TTGTTTATG.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................TGTTTATGGTCAGCAAGTGTA-T----T.............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................................................TTGGAT--------------A-------------------------AGAA-ATCAATCC---------------------------------AGT----......................................................................................................2211.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CTGTTGGACTCGAC--TTTTTGAT..........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CTTGGATGCACTGGCACAG...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................TTGGGTCAAATTGATAGAGATGC..................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................CCACTTATATCCC---TTTGATCCTTGCAG..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATCCC---TTTGATCCTTGCAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TGGATGCACTGGCACAGCACGTGACCC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TTATGGTCAGCAAGTGTA-T----T.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAGCACGTGACCCAGCGACAT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................TTGATAGAGATGCA-GTGTA-TTGTTTATG.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................TTGGGTCAAATTGATAGAGATG...................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GATAGAGATGCA-GTGTA-TTGT......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................TGGGTCAAATTGATAGAGATG...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GCA-GTGTA-TTGTTTATGG................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CACCTTGGATGCACTGGCACAGCACGT..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TAGAGATGCA-GTGTA-TTGTTT....................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........C------TGGCATT------------------TGCTGAACTGTTG............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CTGGCACAGCACGTGACCC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CTCGAC--TTTTTGATAAACCC---TCCA-------------................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATTGATAGAGATGCA-GTGTA-..........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................GCTGAACTGTTGGACTCGAC--..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CACCTTGGATGCACTGGCACAGC..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TTATGGTCAGCAAGTGTA-T----TA............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................GT----ACATGTTATTTTC--GTAC...................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GTCAAATTGATAGAGATGCA-GTG.............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AT--------------A-------------------------AGAA-ATCAATCC---------------------------------AGT----ACATG.................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GTTTATGGTCAGCAAGTGTA-T----TAATAT........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GACACCTTGGATGCACTGG........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................GAGATGCA-GTGTA-TTGCG.....................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000
droEre2
CGA---GCAGGC------TGGAATT------------------TCTAGAACTGTTGGACTCGCCGACTTCTGATAAAAAAAAAACCA-------------ATA-GCGATAA---TATGAT--TTTGGGTCAAATTA--------------------------------------TA-TTGGGTAATTTTGGAT--------------A-------------------------CGAA-ATCAAACC---------------------------------TCT---------TTATATCC--GTAGTAACCAACGAAATC-C---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCCCTGGCGCAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................GTTTTCGACACCTTGGATGCCCTGGCGC.....................2811.0010100000
................................................................................................................................................................................................................................................................................................................GTAACCAACGAAATC-C---TTTGATCCTTG.....................................................2711.0011000000
..........................................................................................................GATAA---TATGAT--TTTGGGTCA.................................................................................................................................................................................................................................................................2011.0010000010
...............................................GAACTGTTGGACTCGCCGAC.................................................................................................................................................................................................................................................................................................................................2011.0010000010
...................................................................................................................................................................................................................................................................................................................................................GTTTTCGACACCTTGGATGCC............................2111.0010100000
............................................................................................................................................................................................................................................................................................................................................................................CGCAGCACGTGACCCAGC......1811.0010000010
................................................................................................................................................................................................................................................................................................................................................AGAGTTTTCGACACCTTGGATG..............................2211.0010001000
.......................................................................................................................................................................................AATTTTGGAT--------------A-------------------------CGAA-ATCAAACC---------------------------------TCT---------.................................................................................................2611.0011000000
...................................................................................................................................................................................................................................................................................................................................................GTTTTCGACACCTTGGAT...............................1811.0010000010
.......................................................................................................................................................................................................................................................................................................................................................TCGACACCTTGGATGCCCTGG........................2111.0010010000
........................................................................................................................................................................................................................................................................................................................................................CGACACCTTGGATGCCCTGGCGC.....................2311.0010000010
.........................................................................................................................................................................................................................................................................................................................................................GACACCTTGGATGCCCTGG........................1911.0010001000
droYak3
CCA---GCAGAA------TGGAATT------------------TGTTGAACAGTTGGACTCGAC--TTTCTGATAAACCA---GGCA-------------ATA-TTG---ATAATATGAT--TTTGGGTCAAATTGATAGAGATAAA-TTGT----ATTTATGGCCAGCAAATGCA-A----TAATTTTGGAT--------------A-------------------------AGCA-ATCGAACC---------------------------------ACA---------ATATTTCAGTGTACTAACCAACGAAATCCC---TTTGATCCTTGCAGAGTTTTCGACACCTTGGATGCACTGGCACAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................GTTTTCGACACCTTGGATGCACTG.........................2412.00201100000000
......................................................................................................................................................................................................................................................................................................................................................TTCGACACCTTGGATGCACTG.........................2112.00202000000000
............................................................................................................................TGGGTCAAATTGATAGAGATAAA-TTGT----........................................................................................................................................................................................................................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................CGACACCTTGGATGCACTGG........................2011.00100000010000
.............................................................................................................................GGGTCAAATTGATAGAGATAAA-TT..............................................................................................................................................................................................................................................2411.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GTTTTCGACACCTTGGATGCACTGG........................2511.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................TCGACACCTTGGATGCACT..........................1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................CACCTTGGATGCACTGGCACA....................2111.00101000000000
..........................................................................................................................................................................................TTTGGAT--------------A-------------------------AGCA-ATCGAACC---------------------------------ACA---------A................................................................................................2411.00100000010000
..............................................................................................................................................................TTATGGCCAGCAAATGCA-A----TAAT..........................................................................................................................................................................................................2311.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................CACCTTGGATGCACTGGCACAGCACGA..............2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................TTTCGACACCTTGGATGCACT..........................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................AAATCCC---TTTGATCCTTGCAG..................................................2111.00101000000000
....................................................GTTGGACTCGAC--TTTCTGATA.........................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................GATGCACTGGCACAGCACGT..............2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................TTTCGACACCTTGGATGCACTGG........................2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................CACAGCACGTGACCCAGCGAC...2111.00100000010000
droEug1
CCA---GCAGCC------TGGTATA----TACATATATG----TATTGAACTTTTGGACTGGAC--TTTCTGATAAACCC--------------CATCGAATA-GCGATAAAAATATGAT--TTTGGGTCAAATTGATAAGGATAAA-ATGTAATAATTTATAGCCAGGAAAAATATT----TGATTTTGGAT--------------AAATTATATATGATAAACATTACAATAATTTG--------------------------------------------------------CCCC--TTACTAGTCAATAAAATCCT---TCTGATCATTACAGGGTTTTCGACACTCTGGAGGCACTGGCTCAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotal
No Reads
droBia1
AT--------------------ATT------------------TGTTGAACTGTTGGACTGAGC--TTTCTGATAAACCA--------------------GTT-GCGATAATAATATGAT--ATTGGGTCAAATTGATAGGAATAAT-AC----AA----------AGGGATAGTCTA----AGATTTCGGAT--------------AAAACATATATGATA-----------AGAAAATCA--------------------------------------------GCATGGTTTTTCC--CTATTAACCCGAAATATT-A---TCTGCT-TTTGCAGGGTTTTCGACACACTGGAGGCCCTGGCGCAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotal
No Reads
droTak1
CCA---GCAGCC------TGCTACTCGTATTCGTATTCGTATTCGTTGAACTGTTGGACTGGAC--TTTCTGATAAACCA---AG--TTGTATTCACCGCATA-CCGATAATAATGTGAT--TTTGGGTCAAAGTGATAGGGATAAA-ATA---TAATTTATGGCCAGGAAAATGATT----TGATTTTGGAT--------------A-------------------------CCAT-TGT-----------------------------------------TTACCATT-ATTTTTCC--CCATTAACCCCGAATATC-C---TTTGGTCATTGCAGGGTTTTCGACACTCTGGAGGCTCTGGCGCAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotal
No Reads
droEle1
CCA---GCAGCC------TGGTTTTTG----------------T-TTGAACTGTTGGACTGGAC--TTTCTGATAAACAA---G---TTGGATACATCGAATA-GCGATAATAATATGAT--TTTGGGTCAAAATGATAGGACTAAA-TTC---GAATTTATGGTCAGGGAAATGATA----TGATTTGGG-------------GATAAATTTGATATGATAAAGATAC------TTTT-CAAGGCAAAAA----------------TACATGTATATT---TAACTTATATTG-TTCT--TCACTAAAGTTCGATTTTCC---TCTGATCATTACAGGATTTTCGACACATTGGAGGCACTGGCGCAGCACGTGACCCAGCGGCACGSizeHit CountTotal NormTotal
No Reads
droRho1
CCA---GCAGCC------TGGTAAT------------------TCTTGAACTCATGGACTGGAC--TTTCTGATAAACAA---G---TTGTATGTATCGAATA-GCGATAATAATATGATTTTTTGGGTCAAATTGATAGGACTAAA-TA----AAATTTATGGTCAGAAATATGATT----TGATTTTGGAT--------------AAATTGTATATGAAAAAGATTA------TTTG-TAATGCATAAAATATGTACATAGATATTATATATATATT---TTACGAATGTTGTTCCC--TTACTAAAGTCCGATTTTTA---TCTGATCATTACAGAGTTTTCGACACACTGGAGGCCCTTGCACAGCACGTGACCCAGCGACATGSizeHit CountTotal NormTotal
No Reads
droFic1
GCA---GCAGCC------TGGTATT------------------TGTTGAGCTCTTGGACTGAAC--TTTTTGATTAACCA---G------TACGCATTA-ATACGCGATAATAATATGACA-TTTGGGTCAATACGATAGGGCTTAA-ATA---TTATTTATGGCTAAGAACGGTATT----TGATTTTGGATCGTATTTACGAGATAATATTCATTTGATA-----------AAATTGCCAATAA-------------------------------------AACGAATGATT-TTCA--TAACTAACCACTGATTTTGT---TCTGATCATTGCAGAGTTTTTGACACACTGGAGGCACTGGCTCAACACGTGACCCAGAGACACGSizeHit CountTotal NormTotal
No Reads
droKik1
CCA---GCAGCCGTTGTCTGGAAAC------------------GGCTGAACTTGTGGACTGAAC--TTTGTGATAAAGCT---T---TTGTGTGGATTC-ATA-GCGATAATAATACAAT--TTTAGATCAAAGTAATAAGGCCAAAAATC---TATTTAATAGCCAAGATAAACA-G----TAA--TTGGAT--------------AAAT----------------------AGAA-CTTAACGCTAAAGAAATATACTT----------------------TTTAAAC-----ACCT--TTACTTACGTGCAATTCTCCGTTTCTCCTCTTTACAGGGTCTTTGACACACTGGAGGCCCTTGCCCAGCACGTCACCCAGCGACATGSizeHit CountTotal NormTotal
No Reads
droAna3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACTTAAAATTTCCC----TTTTTAATTACAGAATTTTTGACACACTGGAGGCCTTGGCCCAGCACGTCACCCAGAGGCATGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...........................................................................................................................................................................................................................................................................................................................................................CACACTGGAGGCCTTGGCCCAGCACGT..............2712.002100010
.........................................................................................................................................................................................................................................................................................................................................................................TGGCCCAGCACGTCACCCAGA......2112.002200000
.........................................................................................................................................................................................................................................................................................................................................................GACACACTGGAGGCCTTGGCCCA....................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................TTTGACACACTGGAGGCCTTG.........................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................GAATTTTTGACACACTGGAGG..............................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................GGAGGCCTTGGCCCAGCACGTCA............2311.001010000
............................................................................................................................................................................................................................................................................................................................................................ACACTGGAGGCCTTGGCCCAGCACGT..............2611.001010000
........................................................................................................................................................................................................................................................................................................................................................TGACACACTGGAGGCCTTGGCCC.....................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................TGACACACTGGAGGCCTTGG........................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................CACTGGAGGCCTTGGCCCAGCACGT..............2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................GACACACTGGAGGCCTTGGCCCAGC..................2511.001010000
droBip1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACCTTAAATTTTCC---TT---TTTTTACAGAATTTTTGACACACTTGAGGCTTTGGCCCAGCACGTCACCCAGAGGCATGSizeHit CountTotal NormTotal
No Reads
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGGTATTCGAAACACTGGAAGCTCTGGCCCAACACGTCACGCAGAGGCATGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................TATTCGAAACACTGGAAGCTCTGG........................2413.0030000000030
.............................................................................................................................................................................................................................................................................................................................................................................CCAACACGTCACGCAGAGGC...2012.0020020000000
...................................................................................................................................................................................................................................................................................................................................................GTATTCGAAACACTGGAAGCTCTG.........................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................AACACTGGAAGCTCTGGCCCAACACGTC.............2811.0010010000000
............................................................................................................................................................................................................................................................................................................................................................ACACTGGAAGCTCTGGCCCAACA.................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................ATTCGAAACACTGGAAGCTCTGGC.......................2411.0010010000000
........................................................................................................................................................................................................................................................................................................................................................CGAAACACTGGAAGCTCTGGCC......................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................TGGAAGCTCTGGCCCAACACG...............2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................GGGTATTCGAAACACTGGAAGCTCTGG........................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................GGCCCAACACGTCACGCAGAGG....2211.0010100000000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGGTATTCGAAACACTGGAAGCTCTGGCCCAACACGTCACGCAGAGGCATGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................ATTCGAAACACTGGAAGCTCTG.........................2215.005500000
..........................................................................................................................................................................................................................................................................................................................................................AAACACTGGAAGCTCTGGCC......................2012.002200000
...........................................................................................................................................................................................................................................................................................................................................................AACACTGGAAGCTCTGGCC......................1912.002200000
..............................................................................................................................................................................................................................................................................................................................................................................CAACACGTCACGCAGAGGC...1911.001100000
...................................................................................................................................................................................................................................................................................................................................................GTATTCGAAACACTGGAAGCTCTGGCCC.....................2811.001100000
............................................................................................................................................................................................................................................................................................................................................................ACACTGGAAGCTCTGGCCC.....................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AACACGTCACGCAGAGGC...1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................ATTCGAAACACTGGAAGCT............................1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................AACACTGGAAGCTCTGGCCCA....................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................ATTCGAAACACTGGAAGCTCTGGCCC.....................2611.001100000
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCTTTGAGACACTTGAGGCGCTGGCTCAACATGTCACCCAGAGGCATGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...................................................................................................................................................................................................................................................................................................................................................ATCTTTGAGACACTTGAGGCGCTGGCT......................2712.00201100
.....................................................................................................................................................................................................................................................................................................................................................CTTTGAGACACTTGAGGCGCT..........................2111.00100100
...................................................................................................................................................................................................................................................................................................................................................ATCTTTGAGACACTTGAGGCGCTG.........................2411.00110000
...........................................................................................................................................................................................................................................................................................................................................................GACACTTGAGGCGCTGGCT......................1911.00100100
......................................................................................................................................................................................................................................................................................................................................................TTTGAGACACTTGAGGCGCTGGCT......................2411.00100100
...............................................................................................................................................................................................................................................................................................................................................................................AACATGTCACCCAGAGGC...1811.00100010
droVir3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGAGTTTTTGAATCTTTGGAGGCGCTGGCACAACACGTCACCTTACGTCATGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................GGAGGCGCTGGCACAACA.................1811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GGCACAACACGTCACCTTACGTC...2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GAATCTTTGGAGGCGCTGGCA......................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GTTTTTGAATCTTTGGAGGCG............................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTGAATCTTTGGAGGCGCTGG........................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GAATCTTTGGAGGCGCTGGCAC.....................2211.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
TCG---CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTCTTGCAGAGTTTTCGAGTCCCTGGAGGCGCTCGCACAACATGTCACATTACGTCACGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
GTA---C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTAGTTATCTCTT---TT---GGCTTGCAGAGTTTTCGAATCTTTGGAGGCACTCGCCCAACATGTCACTCTGCGTCATGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................CTCGCCCAACATGTCACTCTG.......2111.00110

Generated: 05/18/2015 at 07:57 PM