ID:

dsi_26843

 Coordinate:

3l:13658797-13658946 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [3l_13658631_13658747_+]; CDS [3l_13658748_13658796_+]; exon [3l_13658631_13658796_+]; intron [3l_13658797_13659245_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCAGGTGAGTTATAGACGTTAGAATGCTGAAGTGTTTAGCCAAACAAAGAATAATTGTTTCTGCGTTTGTGTGCGCTTTAAACTAATGCACACAGGCATATATTAAAACAATCGAGGTCATCGTTTTAGAATTGAAACTTTGCCTTATCAGTGTTTTTGCCATAAAGTATATTTAAAAAGTGAAAAAATTACATTTTTATTTAA
****************************************************************.........((((((((...(((((((..((((.......))))..))))).))))))))))....************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.........................CTGCTCGCAGGCTTGGCT............................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0
........TGTTTTTAGCTTTAGCCCTGCTCGCA........................................................................................................................................................................................................................ 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0
................................................AGGTGAGTTATAGACGTTAGAATGCT................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................TTAAAACAATCGAGGTCATTG................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................CGTTTGTGTGCGCTTTAAACT........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........TGTTTTTAGCTTTAGCCCTGCTCGC......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................TTAGAATGCTGAAGTGTTTAG..................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................GCTTGGCTTTCTCAG........................................................................................................................................................................................................ 15 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...............AGCTTTAGCCCTGCTCGCAG....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............TTTAGCTTTAGCCCTGCTCGCAGGCT.................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................AGGCTTGGCTCTCTCA......................................................................................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 0 0 0 1
.....................AGCCCGGCTCGCTGGCGTGG................................................................................................................................................................................................................. 20 3 6 0.50 3 2 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................TATATTTAATAAGTCAAAAAA................ 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................AACTGTTGCTGCGTTTTTGTGC.................................................................................................................................. 22 3 6 0.17 1 0 0 0 0 1 0 0 0 0
...............................................................GTTCGAATGCTGACGTG.......................................................................................................................................................................... 17 2 8 0.13 1 0 1 0 0 0 0 0 0 0
...........................................................GGAAGTTAGAATGCTGA.............................................................................................................................................................................. 17 2 11 0.09 1 1 0 0 0 0 0 0 0 0
...........TTTTAGCTGTAGCCCGG.............................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTACGTTCACAAAAATCGAAATCGGGACGAGCGTCCGAACCGAAAGAGTCCACTCAATATCTGCAATCTTACGACTTCACAAATCGGTTTGTTTCTTATTAACAAAGACGCAAACACACGCGAAATTTGATTACGTGTGTCCGTATATAATTTTGTTAGCTCCAGTAGCAAAATCTTAACTTTGAAACGGAATAGTCACAAAAACGGTATTTCATATAAATTTTTCACTTTTTTAATGTAAAAATAAATT
************************************************************************************************************************.........((((((((...(((((((..((((.......))))..))))).))))))))))....**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 M023
head
 M025
embryo
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................................TATATAGGTTCGTTAGCTCCAGT.................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................TCGGTTTGTTTCTTATTAAC................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................TATAAGTTCGTTAGCTCCCGT.................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................CAAAGTCTTAGGTTTGAAAC.............................................................. 20 3 13 0.15 2 0 0 0 0 0 1 1 0
.........................................................TATCTGCAATCTGAG.................................................................................................................................................................................. 15 2 20 0.10 2 0 0 2 0 0 0 0 0
........................................................................................................................................................TTGCTAGCTCCAATAGC................................................................................. 17 2 10 0.10 1 0 0 1 0 0 0 0 0
.......................................................CGTATCTGCAATCTTAGGA................................................................................................................................................................................ 19 3 12 0.08 1 0 0 0 0 1 0 0 0
........................................................GTATCTGCAATCTGACGAA............................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 1 0 0 0 0
.............................................................................CACAAATCGGATTGT.............................................................................................................................................................. 15 1 16 0.06 1 0 0 0 1 0 0 0 0
.............................................................................CAAAAATCGGTTTGTTTTTTAA....................................................................................................................................................... 22 3 20 0.05 1 0 0 1 0 0 0 0 0
........................................................GTATCTGCAATCTGAC.................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:13658747-13658996 + dsi_26843 AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCAGGTGAGTTATAGACGTTAGAATGCTGA-A-----GTGTTT---AGCCAAACAAAGAAT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACAGGCA--TATATT-AAAACAATCGAGGTCATCGTTTTAGAAT---------TG-AAACTTTGCCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---AGTGTTTTT--------------GCCATAAAGTATATTTAAAAAGTG-----AAAA----------------AATTA-------------CATT--TT-TATTTAA----------------------------------
droSec2 scaffold_0:6134176-6134410 + AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCGGGTGAGTTATAGGCGTTAGAATGCTGA-A-----GTGTTT---AGCCAAACAAAGAAT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACATGCA--TATATT-AAAACAATCGAGGTCATCGTTTTAGAAT---------TG-AAACTTTACCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---AGTGTTTTT--------------GCCA---------------AAGTG-----AAAA----------------AATTA-------------CATT--TT-TATTTAA----------------------------------
dm3 chr3L:13987451-13987703 + AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCAGGTGAGTTATAGACGTTAGAATGCTAA-A-----GTGTTT---AGCCAAACAAAGAGT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACATGCA--TATATT-AAAACAATCGAGGTCATCGTTTTAGGAT---------TG-AAACTTTAGCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCATTTTTTTT--------------GCCATGAAGTATATTTAAAAAGTA-----AAAA----------------GAACA-------------TGTT--TT-TATTAAA----------------------------------
droEre2 scaffold_4784:13979174-13979414 + AATGCAAGTGTTTTTAGCTTTAGCCCTGTTCGCAGGCTTGGCTTTCTCAGGTGAGCTATAGACGTTAGAATGCA---A-----GTGTTT---AGCCAAACAAAGAAT--AGC----------------------TGTTCCTGCGTTAATGTGC--GCTTTAAACTAAT---------------------------GCATACATA----TACAGTAAAAACAGTCGAGGTCATCGTCTTAGCAA---------TGTTAACTTTATCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---TTTGTTGTT--------------GCAATAACGTATATTTAAAAAATG-----AAAA----------------GAAGA-------------TATT--TT------------------------------------------
droYak3 3L:14075002-14075244 + AATGCAAGTGTTTTTAGCCTTAGCCCTGCTCGCAGGCTTGGCTTTCTCGGGTGAGTTATAGACGCTAGAATGCAAA-A-----GAGTTT---AGCCAAACAAAGAAT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACA--------TATT-AAAACAATCGAGGTTATCGTCTTAGCAT---------TGAAAACTTTACCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---TTTGTTGTT--------------GAAATTAGGTATATATAAACAAAG-----AAAG----------------GAAT---------------CTT--TT-TTCTTGA----------------------------------
droEug1 scf7180000409456:172599-172974 + AATGCAAGTGTTTTTAGCTGTAGCCCTGCTAGCAGGCTTGGCTTTCTCTGGTAAGTTATAAACATTAGATTGCAAA-A-----ATGTTT---AGACAAACAAAGAAT--AAA----------------------CATTTGTGCGTGTGTGTGTGTGTTATAAAAGAAG---------------------------GCATATA-------------AAAACTAGCGAGGTCAATGTTTTAGAAA---------TATAAACTTTACTTTAAATAACTAAG----------------------------CTTTTTA---------AGCTTAGCTTT--GGTC--------------------------C----------------AT---CTATTTTTAA-----------TAGAGAAATACATATGTATATAGTTTTATACTGAATAATGAATAATATGATACACAGATCAAATTTTATA---ATTGTTTTTACT----------TACCA---------------AAGGTTATTTATTGCCAATTGAGACAAAAAAATTACCATTGTAAGAACC-----GT-TATTTAT----------------------------------
droBia1 scf7180000302428:5926988-5927334 - AATGCAAGTGTTCTTAGCTCTAGCCCTGCTCGCAGGCCTAGCTTTGTCGGGTGAGTG-TAAACATTAGATTGCAAAAA-----AGGTCT---CGCCAAACAAAGAAT--AAT----------------------TGCTTATGCGTGTGTGTGT-TGCGCAAAACTAAT---------------------------GCATATA-------------AGAACAAGTGAGGTCAATGCTTTAGAAC---------TTTT-----TAACTAA---------TCTTACAAATTAAAAATTCAAA-------ATTTTTAAA-------------------------------------TTTCCCTTATAGTCATACATTAGTTAACGTAG---CCAT-TTTAATGTCGGAAAGATACAGAATTTGCTAAGAATATAG-----------------------------------TCAAATTCGA-----TTTGTTTTTCTGAAAATACATC--TAAGA-------TCTTA--GATT-----TATAAAACT---------------------------------------TCCTAA----------------------------------
droTak1 scf7180000415667:133791-134077 - AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCCTGGCTTTCTCGGGTGAGT-ATAAACATTAGATTGCAAAAA-----AGGTTT---TGCCAAACAAAGAAT--AAT----------------------TGCTTGTGCGTGTG--TGT--GCTTT-AACTAAT---------------------------GCATATA-------------AAAACAAGTAAGGTCAATATTTTAGCAT---------TGTTAGCTCTAACTTT---------TTT-------TAAGAACTTAAAAAACATGCTTTTTAAAAA---AAAGTTGCG------GATTTTAATAT----ATTTTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TTTAATTTAATGTAGGAATTTGTATTCTGTAAAATTTTAATTAT
droEle1 scf7180000491255:2440996-2441283 + AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTGTCGGGTGAGTTGTTAACATTAGGTTGCAAAAA-----GTGTTT---AGCCAAACAAAGAAT--AAT-----------------------CTATTTGCATGTGT--GT--G-TTTAAACTAGT---------------------------GCAAAAAAAC------------AACAAAGGAGGTTGATATATTAACAT---------TGTTAGGT---------------------------------------------------------------------------GTTT-GAAAATTAAT--TGATTATTATAGCTAGGCAATTGATTGCTTAATTACTGC-TTTAAGGTTAAAAAGAT--------------------------------------------------------------TTTGA-----TTTGATTTTC------------------------------------------------ACTTCGGACA----ATTTT-------------CGTT--TTTAATTTAA----------------------------------
droRho1 scf7180000760202:106645-106885 - AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTGTCGGGTGAGTTAAAAACATTAGGTTGCAAAAA-----TTGTTA---AGCCAAACAAAGAAT--AAT-----------------------CTTTTTGCATG--TGTGT--GTTTTAAACTGCA---------------------------GCATTTAAAC------------AACAAATAAGGTCAAACTATTAGCAT---------TGTTAATTCTTTTAAA------------------------------------------------ACTATTTGCATTGTTAAGTGGTT-GAAAATTAAT--TGAT---------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------CTTTA-------------TATTTTCC-TAATTAA----------------------------------
droFic1 scf7180000453784:306060-306175 + AATGCAAGTGTTTTTGGCCTTAGCCCTGCTCGCAGGCTTGGCTTTGTCGGGTAAGTT-TAAGCGTTAGATTGCTAA-A-----ATGTTT---AGCCAAACAAAGAAT--ATT----------------------ATTTTGTGAGTGTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302441:2804362-2804581 + AATGCAAGTGTTTTTAGCATTGGCCCTGCTAGCGGGCTTGGCTTTGTCGGGTGAGTTAT---CATTAGATTGCAAAAAAAA--AAGTTT---AACTAAACAAAGAAAACAAT----------------------ACTTTGTGCGTGTGC------------------------------------------------ATATATGTA--CATA----------------------TAGTAGCATTTTTAGCATTTTTA---------------------------------------------------------TAA---AATGCTGAGCTAA--GGTT-------------------------------------------------------------------------------------------------------------------------------------TTAA-----TTTGTTTTTC----------------------TATTTCTAAGAAATG-----AAAGTAACTTC--------------------------------------GTAGA----------------------------------
droAna3 scaffold_13337:11955999-11956222 - AATGCGAGTGGTGTTAGCCTTAACCCTCCTGGTGGGCCTGATATTATCGGGTAAGTTA----CATTAGAAGGAAAAAAAAATCATATTT---AAGCAAACAAAGAAT--TATATATATATGTATTTTATTAGATTGTGTGAGT-------TGC--ATTTGAAATTAATCAGTTACACACTCAGG--------------T----ACATATGTATT-AAAATGATAGAAGCT------TAAAAAA---------TGTTTACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGA-------------------------------------------ATTTA-------------TGTT----------TA----------------------------------
droBip1 scf7180000396589:2030772-2030969 + AATGAGAGTGGTGTTAGCCTTAGGCCTGCTGGTAGGCCTGATATTATCAGGTAAGTTA----CATTAGAAGGTGAAAC-----ATAGTT---AGCCAAACAAAGAAC--TACATAT------ATTTTATTAGATTGTGCAAGT-------TGC--ATTTGAAATTAATCAGTTATACACTGAGGTACTTACATATACAT----ACA--T---------------ATGTACAAGATGATAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAA----------------------------------
dp5 XR_group6:5810807-5810903 + AATGCAAGTGTTTTTAGTTTTAGCGCTGCTGGCGGGCCTGGCGCTCTCAGGTGAGT---AAATAATAGATTGCGAAAA-----GTGTTT---CGTCAAACAAAGAAT--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_47:303122-303217 + AATGCAAGTGTTTTTAGTTTTAGCGCTGCTGGCGGGCCTGGCGCTCTCAGGTGAGT---AAATAATAGATTGCGAAAA-----GTGTTT---CGTCAAACAAAGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004511:6282776-6282817 - A-TGCAAGTGTTTTTAATTGCTGCGCTGATTGTGGGCCTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:23117838-23117897 - AATGCGATTGTGGTTGAATTTAGCGCTGCTTGCATGCTTAGCACTGGCAGGTGAGTAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:17729351-17729491 - AATGCGTTCGTGGTTAACTTTAGCATTGCTGGTGTGCATTGCACTGGCAGGTGAGTAATA--CTACATAAATTTAA-A-----ATGTAAAAGCAGCAAACGAAGATT--GAA---------------TTTAAATCGTCTATGCGGCTT-TTTC--GCTTGACATTTGT---------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:18383414-18383478 - AATGCGTTTGTGGTTGAATTTAGCGCTGCTGGCCAGCTTAACCCTGACAGGTGAGTAATATAGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCAGGTGAGTTATAGACGTTAGAATGCTGA-A-----GTGTTT---AGCCAAACAAAGAAT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACAGGCA--TATATT-AAAACAATCGAGGTCATCGTTTTAGAAT---------TG-AAACTTTGCCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---AGTGTTTTT--------------GCCATAAAGTATATTTAAAAAGTG-----AAAA----------------AATTA-------------CATT--TT-TATTTAA----------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................CTGCTCGCAGGCTTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
........TGTTTTTAGCTTTAGCCCTGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200010000010000000
................................................AGGTGAGTTATAGACGTTAGAATGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..............................................................................................................................................CGTTTGTGTGC--GCTTTAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
........TGTTTTTAGCTTTAGCCCTGCTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
................................................................TTAGAATGCTGA-A-----GTGTTT---AG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
...................................GCTTGGCTTTCTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
...............AGCTTTAGCCCTGCTCGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
............TTTAGCTTTAGCCCTGCTCGCAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
droSec2
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCGGGTGAGTTATAGGCGTTAGAATGCTGA-A-----GTGTTT---AGCCAAACAAAGAAT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACATGCA--TATATT-AAAACAATCGAGGTCATCGTTTTAGAAT---------TG-AAACTTTACCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---AGTGTTTTT--------------GCCA---------------AAGTG-----AAAA----------------AATTA-------------CATT--TT-TATTTAA----------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................AAT---------TG-AAACTTTACCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---AGT.........................................................................................................................................2311.0010100
..................................................GTGAGTTATAGGCGTTAGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................TTAGCCCTGCTCGCAGGCTTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...............................................................GTTAGAATGCTGA-A-----GTGTTT---AGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
dm3
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTCTCAGGTGAGTTATAGACGTTAGAATGCTAA-A-----GTGTTT---AGCCAAACAAAGAGT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACATGCA--TATATT-AAAACAATCGAGGTCATCGTTTTAGGAT---------TG-AAACTTTAGCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCATTTTTTTT--------------GCCATGAAGTATATTTAAAAAGTA-----AAAA----------------GAACA-------------TGTT--TT-TATTAAA----------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................CCCTGCTCGCAGGCTTGGCTTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015
....................................................................................................................................................................TAAT---------------------------GCACACATGCA--TAT..........................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTTTTTAGCTTTAGCCCTGCTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATGCAAGTGTTTTTAGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................CTCAGGTGAGTTATAGACGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................TGCTCGCAGGCTTGGCTTTCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGTGTTTTTAGCTTTAGCCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ATCGAGGTCATCGTTTTAGGAT---------.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......AGTGTTTTTAGCTTTAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCTTTAGCCCTGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGGCTTTCTCAGGTGAGTTATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGAGT--AAT----------------------TGTTTCTGCGTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GAGT--AAT----------------------TGTTTCTGCGTTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.........GTTTTTAGCTTTAGCCCTGCTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTAGCTTTAGCCCTGCTCGCAGGCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCCTGCTCGCAGGCTTGGCTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTTTAGCTTTAGCCCTGCTCGCAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTAGCTTTAGCCCTGCTCGCAGGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGCTTTAGCCCTGCTCGCAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTTATAGACGTTAGAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......GTGTTTTTAGCTTTAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTTTTTAGCTTTAGCCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGTTAGAATGCTAA-A-----GTGTTT---AGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TTCTCAGGTGAGTTATAGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............AGCTTTAGCCCTGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTT---AGCCAAACAAAGAGT--AAT----------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..TGCAAGTGTTTTTAGCTTTAGCCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TTCTCAGGTGAGTTATAGACGTTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TAGACGTTAGAATGCTAA-A-----GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...GCAAGTGTTTTTAGCTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................TTAGCCCTGCTCGCAGGCTTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CTTGGCTTTCTCAGGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CTTTAAACTAAT---------------------------GCACACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGCAAGTGTTTTTAGCTTTAGCCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------------GCCATGAAGTATATTTAAAAAG...............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTTTTTAGCTTTAGCCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTTATAGACGTTAGAATGCTAA-A-----AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTGCTCGCAGGCTTGGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGTGTTTTTAGCTTTAGCCCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTAGCTTTAGCCCTGCTCGCAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCTCGCAGGCTTGGCTTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCAGGTGAGTTATAGACGTTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCCCTGCTCGCAGGCTTGGCTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAGCTTTAGCCCTGCTCGCAGGCTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGCTTGGCTTTCTCAGGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CTAAT---------------------------GCACACATGCA--TATAT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTAGCTTTAGCCCTGCTCGCAGGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GACGTTAGAATGCTAA-A-----GTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................ATGCA--TATATT-AAAACAATCGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTATAGACGTTAGAATGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............TAGCTTTAGCCCTGCTCGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCTGCTCGCAGGCTTGGCTTTCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................ACGTTAGAATGCTAA-A-----GTGTTT---AGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............TTTAGCTTTAGCCCTGCTCGCAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AT----------------------TGTTTCTGCGTTTGTGTGC--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AT----------------------TGTTTCTGCGTTTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................TTTAGCCCTGCTCGCAGGCTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AAT----------------------TGTTTCTGCGTTTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........GTTTTTAGCTTTAGCCCTGCTCGCAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTTATAGACGTTAGAATGCTAA-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................CCCTGCTCGCAGGCTTGGCTTTCTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTTTTTAGCTTTAGCCCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GAGT--AAT----------------------TGTTTCTGCGTTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.........................CTGCTCGCAGGCTTGGCTTTCTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AATGCAAGTGTTTTTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......GTGTTTTTAGCTTTAGCCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TGTGC--GCTTTAAACTACG---------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAGCTTTAGCCCTGCTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droEre2
AATGCAAGTGTTTTTAGCTTTAGCCCTGTTCGCAGGCTTGGCTTTCTCAGGTGAGCTATAGACGTTAGAATGCA---A-----GTGTTT---AGCCAAACAAAGAAT--AGC----------------------TGTTCCTGCGTTAATGTGC--GCTTTAAACTAAT---------------------------GCATACATA----TACAGTAAAAACAGTCGAGGTCATCGTCTTAGCAA---------TGTTAACTTTATCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---TTTGTTGTT--------------GCAATAACGTATATTTAAAAAATG-----AAAA----------------GAAGA-------------TATT--TT------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................GTGAGCTATAGACGTTAGAATGCA---A-----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
AATGCAAGTGTTTTTAGCTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...........................GTTCGCAGGCTTGGCTTTCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............TTAGCTTTAGCCCTGTTCGCAGGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
droYak3
AATGCAAGTGTTTTTAGCCTTAGCCCTGCTCGCAGGCTTGGCTTTCTCGGGTGAGTTATAGACGCTAGAATGCAAA-A-----GAGTTT---AGCCAAACAAAGAAT--AAT----------------------TGTTTCTGCGTTTGTGTGC--GCTTTAAACTAAT---------------------------GCACACA--------TATT-AAAACAATCGAGGTTATCGTCTTAGCAT---------TGAAAACTTTACCTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---TTTGTTGTT--------------GAAATTAGGTATATATAAACAAAG-----AAAG----------------GAAT---------------CTT--TT-TTCTTGA----------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................AGCCCTGCTCGCAGGCTTGGCTTTCTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000000002
........TGTTTTTAGCCTTAGCCCTGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..............................CGCAGGCTTGGCTTTCTCGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
AATGCAAGTGTTTTTAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
AATGCAAGTGTTTTTAGCTGTAGCCCTGCTAGCAGGCTTGGCTTTCTCTGGTAAGTTATAAACATTAGATTGCAAA-A-----ATGTTT---AGACAAACAAAGAAT--AAA----------------------CATTTGTGCGTGTGTGTGTGTGTTATAAAAGAAG---------------------------GCATATA-------------AAAACTAGCGAGGTCAATGTTTTAGAAA---------TATAAACTTTACTTTAAATAACTAAG----------------------------CTTTTTA---------AGCTTAGCTTT--GGTC--------------------------C----------------AT---CTATTTTTAA-----------TAGAGAAATACATATGTATATAGTTTTATACTGAATAATGAATAATATGATACACAGATCAAATTTTATA---ATTGTTTTTACT----------TACCA---------------AAGGTTATTTATTGCCAATTGAGACAAAAAAATTACCATTGTAAGAACC-----GT-TATTTAT----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AATGCAAGTGTTCTTAGCTCTAGCCCTGCTCGCAGGCCTAGCTTTGTCGGGTGAGTG-TAAACATTAGATTGCAAAAA-----AGGTCT---CGCCAAACAAAGAAT--AAT----------------------TGCTTATGCGTGTGTGTGT-TGCGCAAAACTAAT---------------------------GCATATA-------------AGAACAAGTGAGGTCAATGCTTTAGAAC---------TTTT-----TAACTAA---------TCTTACAAATTAAAAATTCAAA-------ATTTTTAAA-------------------------------------TTTCCCTTATAGTCATACATTAGTTAACGTAG---CCAT-TTTAATGTCGGAAAGATACAGAATTTGCTAAGAATATAG-----------------------------------TCAAATTCGA-----TTTGTTTTTCTGAAAATACATC--TAAGA-------TCTTA--GATT-----TATAAAACT---------------------------------------TCCTAA----------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCCTGGCTTTCTCGGGTGAGT-ATAAACATTAGATTGCAAAAA-----AGGTTT---TGCCAAACAAAGAAT--AAT----------------------TGCTTGTGCGTGTG--TGT--GCTTT-AACTAAT---------------------------GCATATA-------------AAAACAAGTAAGGTCAATATTTTAGCAT---------TGTTAGCTCTAACTTT---------TTT-------TAAGAACTTAAAAAACATGCTTTTTAAAAA---AAAGTTGCG------GATTTTAATAT----ATTTTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TTTAATTTAATGTAGGAATTTGTATTCTGTAAAATTTTAATTATSizeHit CountTotal NormTotal
No Reads
droEle1
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTGTCGGGTGAGTTGTTAACATTAGGTTGCAAAAA-----GTGTTT---AGCCAAACAAAGAAT--AAT-----------------------CTATTTGCATGTGT--GT--G-TTTAAACTAGT---------------------------GCAAAAAAAC------------AACAAAGGAGGTTGATATATTAACAT---------TGTTAGGT---------------------------------------------------------------------------GTTT-GAAAATTAAT--TGATTATTATAGCTAGGCAATTGATTGCTTAATTACTGC-TTTAAGGTTAAAAAGAT--------------------------------------------------------------TTTGA-----TTTGATTTTC------------------------------------------------ACTTCGGACA----ATTTT-------------CGTT--TTTAATTTAA----------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AATGCAAGTGTTTTTAGCTTTAGCCCTGCTCGCAGGCTTGGCTTTGTCGGGTGAGTTAAAAACATTAGGTTGCAAAAA-----TTGTTA---AGCCAAACAAAGAAT--AAT-----------------------CTTTTTGCATG--TGTGT--GTTTTAAACTGCA---------------------------GCATTTAAAC------------AACAAATAAGGTCAAACTATTAGCAT---------TGTTAATTCTTTTAAA------------------------------------------------ACTATTTGCATTGTTAAGTGGTT-GAAAATTAAT--TGAT---------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------CTTTA-------------TATTTTCC-TAATTAA----------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AATGCAAGTGTTTTTGGCCTTAGCCCTGCTCGCAGGCTTGGCTTTGTCGGGTAAGTT-TAAGCGTTAGATTGCTAA-A-----ATGTTT---AGCCAAACAAAGAAT--ATT----------------------ATTTTGTGAGTGTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AATGCAAGTGTTTTTAGCATTGGCCCTGCTAGCGGGCTTGGCTTTGTCGGGTGAGTTAT---CATTAGATTGCAAAAAAAA--AAGTTT---AACTAAACAAAGAAAACAAT----------------------ACTTTGTGCGTGTGC------------------------------------------------ATATATGTA--CATA----------------------TAGTAGCATTTTTAGCATTTTTA---------------------------------------------------------TAA---AATGCTGAGCTAA--GGTT-------------------------------------------------------------------------------------------------------------------------------------TTAA-----TTTGTTTTTC----------------------TATTTCTAAGAAATG-----AAAGTAACTTC--------------------------------------GTAGA----------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AATGCGAGTGGTGTTAGCCTTAACCCTCCTGGTGGGCCTGATATTATCGGGTAAGTTA----CATTAGAAGGAAAAAAAAATCATATTT---AAGCAAACAAAGAAT--TATATATATATGTATTTTATTAGATTGTGTGAGT-------TGC--ATTTGAAATTAATCAGTTACACACTCAGG--------------T----ACATATGTATT-AAAATGATAGAAGCT------TAAAAAA---------TGTTTACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGA-------------------------------------------ATTTA-------------TGTT----------TA----------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..TGCGAGTGGTGTTAGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
AATGCGAGTGGTGTTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
....CGAGTGGTGTTAGCCTTAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
AATGAGAGTGGTGTTAGCCTTAGGCCTGCTGGTAGGCCTGATATTATCAGGTAAGTTA----CATTAGAAGGTGAAAC-----ATAGTT---AGCCAAACAAAGAAC--TACATAT------ATTTTATTAGATTGTGCAAGT-------TGC--ATTTGAAATTAATCAGTTATACACTGAGGTACTTACATATACAT----ACA--T---------------ATGTACAAGATGATAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAA----------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AATGCAAGTGTTTTTAGTTTTAGCGCTGCTGGCGGGCCTGGCGCTCTCAGGTGAGT---AAATAATAGATTGCGAAAA-----GTGTTT---CGTCAAACAAAGAAT--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........GTTTTTAGTTTTAGCGCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................TTAGCGCTGCTGGCGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................GTTTTAGCGCTGCTGGCGGGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
AATGCAAGTGTTTTTAGTTTTAGCGCTGCTGGCGGGCCTGGCGCTCTCAGGTGAGT---AAATAATAGATTGCGAAAA-----GTGTTT---CGTCAAACAAAGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
A-TGCAAGTGTTTTTAATTGCTGCGCTGATTGTGGGCCTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........TTTTAATTGCTGCGCTGATTGTGGGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
......................GCGCTGATTGTGGGCCTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.00101000
................ATTGCTGCGCTGATTGTGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..............TAATTGCTGCGCTGATTGTGGGCCTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
..............TAATTGCTGCGCTGATTGTGGGCCTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
...................GCTGCGCTGATTGTGGGCCTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2411.00100100
...............AATTGCTGCGCTGATTGTGGGCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
droVir3
AATGCGATTGTGGTTGAATTTAGCGCTGCTTGCATGCTTAGCACTGGCAGGTGAGTAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
AATGCGATTGTGGTTGAATTTAGCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002001000000000000000000000000001000000000000000000000000000000000
.....GATTGTGGTTGAATTTAGCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000100010000000000000000000000000000000000000000000000000
.....GATTGTGGTTGAATTTAGCGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000010000010000000000000000000000000000000000000000000000000
.........GTGGTTGAATTTAGCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000010000100000000000000000000000
..............................TGCATGCTTAGCACTGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
AATGCGATTGTGGTTGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
.............................TTGCATGCTTAGCACTGGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...GCGATTGTGGTTGAATTTAGCGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.............................TTGCATGCTTAGCACTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.....................AGCGCTGCTTGCATGCTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........GGTTGAATTTAGCGCTGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
.....................AGCGCTGCTTGCATGCTTAGCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
.........GTGGTTGAATTTAGCGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..TGCGATTGTGGTTGAATTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
...................TTAGCGCTGCTTGCATGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
droMoj3
AATGCGTTCGTGGTTAACTTTAGCATTGCTGGTGTGCATTGCACTGGCAGGTGAGTAATA--CTACATAAATTTAA-A-----ATGTAAAAGCAGCAAACGAAGATT--GAA---------------TTTAAATCGTCTATGCGGCTT-TTTC--GCTTGACATTTGT---------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............GTTAACTTTAGCATTGCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
...........GGTTAACTTTAGCATTGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................GATT--GAA---------------TTTAAATCGTCTATGCGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...................................................................TAAATTTAA-A-----ATGTAAAAGCAGCAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
droGri2
AATGCGTTTGTGGTTGAATTTAGCGCTGCTGGCCAGCTTAACCCTGACAGGTGAGTAATATAGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............GAATTTAGCGCTGCTGGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
......................GCGCTGCTGGCCAGCTTAACCCTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
AATGCGTTTGTGGTTGAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101

Generated: 05/18/2015 at 06:38 PM