ID:

dsi_26795

 Coordinate:

2l:2749927-2750076 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.4 -9.4

Flybase annnotation

exon [2l_2749699_2749926_-]; CDS [2l_2749699_2749926_-]; Antisense to five_prime_UTR [2l_2750027_2750126_+]; Antisense to exon [2l_2750027_2751005_+]; intron [2l_2749927_2751023_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTGATAAAAAGTTATAAGAAATCTACAAAGCCAAACCTTTTTTTTTTATTATTTTTCTATCTGTGTTTTAAACGAGAAATTTGGTCTGGTTGAGCTGAAAGAGAAACTAATAGTGATACATTTCAAAATCGTACGAAATAAGATTAGAACTATTGCTCGAAGCCTAGTTTGATTTAAAAGTTTTTTTATCTTGTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGAC
**************************************************************************.........((.((..((((((.............((((((..((.(((((..........))))).....))..))))))))))))))))...********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
..........................................................................................................................................................................................................................ATTAGCATTCGTTTCGGTACC........... 21 0 1 4.00 4 2 0 2 0 0 0 0 0 0
...........................................................................................................................TGAAAATCGTACGTCATAAGATT........................................................................................................ 23 3 1 2.00 2 0 0 0 0 2 0 0 0 0
............................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCGAG........ 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTAGCATTCGTTTCGGTACC........... 20 0 1 2.00 2 1 0 1 0 0 0 0 0 0
..........................................................................GAGAAATTTGGTCTGGTTGAGCTG........................................................................................................................................................ 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ATTAGCATTCGTTTTGGTACC........... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................TTCGGTACCGAGTCGCTGAC 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCGAC........ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................GAGGACATATCGCCGGAGATT............................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................ATTCGTTTCGGTACCGAGTCGCTGAC 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACCGA......... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................TAAACGAGAAATTTGGTCTGG................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................GAACTATTGCTCGAAGCCTAG.................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................TTAGCATTCGTTTCGGTGCCG.......... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................ATTTCCCCGGAGATTAGC.......................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................CGTTTCGGTACCGAGTCGCTG.. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACC........... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTAGCATTCGTTTCGGTA............. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GTTTCGGTACCGAGT....... 15 0 2 0.50 1 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................TCGTGTGGCAGGAGGATATTT........................................ 21 3 6 0.17 1 0 0 0 1 0 0 0 0 0
.........................................................................................GATGACCTGGAAGAGAAACT............................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................GCAGTCGTTTCGGCACC........... 17 2 14 0.07 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

####################################################################################################------------------------------------------------------------------------------------------------------------------------------------------------------
GAACTATTTTTCAATATTCTTTAGATGTTTCGGTTTGGAAAAAAAAAATAATAAAAAGATAGACACAAAATTTGCTCTTTAAACCAGACCAACTCGACTTTCTCTTTGATTATCACTATGTAAAGTTTTAGCATGCTTTATTCTAATCTTGATAACGAGCTTCGGATCAAACTAAATTTTCAAAAAAATAGAACAACGTCCTCCTGTAAAGGGGCCTCTAATCGTAAGCAAAGCCATGGCTCAGCGACTG
**********************************************************************************.........((.((..((((((.............((((((..((.(((((..........))))).....))..))))))))))))))))...************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
....................................................................................................................TATGTAAAGCTTTGGCATGCTG................................................................................................................ 22 3 1 14.00 14 8 5 0 1 0 0 0
....................................................................................................................TATGTAAAGATTTGGCATGCTG................................................................................................................ 22 3 1 3.00 3 1 2 0 0 0 0 0
..............TATTCTTTAGATGTTTCGGTT....................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 0 1 0
.................................................................CAAAATTTGCTCTTTAAACC..................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................AGCAAAGCCATGGCTCAGCGA... 21 0 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................................TATGTAAAGCTTTGGCATGCT................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................TATGTAAAGCTTTGGCATG................................................................................................................... 19 2 3 0.67 2 0 1 0 1 0 0 0
......................................................................................................................TGTAAAGCTTTGGCATGCTG................................................................................................................ 20 3 5 0.60 3 2 0 0 1 0 0 0
....................................................................................................................TATGTAAAGCTTCAGCATG................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................TGTAAAGCTTTGGCATGC.................................................................................................................. 18 2 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................GCAACGCGATGGCTCAG...... 17 2 13 0.23 3 0 0 0 0 3 0 0
......................................................................................................................................................................TCAAACTAAAGTCTCAAAATAA.............................................................. 22 3 5 0.20 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................AACGCGATGGCTCAG...... 15 2 20 0.15 3 0 0 0 0 3 0 0
.......................................................................................................................GTAAAGTCTTGGCATGC.................................................................................................................. 17 2 8 0.13 1 1 0 0 0 0 0 0
............................................................................................GTCGACTTGTTCTTTGATTAT......................................................................................................................................... 21 3 8 0.13 1 0 1 0 0 0 0 0
.........................................................................................................................................................AACGAGCTTAGGATGACAC.............................................................................. 19 3 19 0.05 1 0 0 0 0 1 0 0
......................AGAAGTTTCGGATTGG.................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1
...........................................AAAAATAATAAAAAG................................................................................................................................................................................................ 15 0 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCATAATCGTAAGGAAAGC................ 19 3 20 0.05 1 0 0 0 0 0 0 1
....................................................................................................................................................................................................................................CAACGCGATGGCTCAG...... 16 2 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:2749877-2750126 - dsi_26795 CTTGA-TAA--AAAGTTATAA---GAAA----TC--TACAA-----A-----------G----------------------------------CCAAA-----CCTT-----------------TTT-------------------------TTTTTAT--TAT-TTTTCT---ATC---------------------T-GT-GTTTTAA---AC---------------------GAGAAATTTGGTCTGGTTGAGCTGAAAGAGAAACTAATAG-------------TGATACATT--------TC--A-----AAATCGTACGAAATAAGA--------------------TTAGAACTATTGCTCGAAGCCTAGTTTGATTTA----AA-AGT---------TT---TTTT--A---TCTTGTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGAC
droSec2 scaffold_5:1028501-1028761 - CTTGA-TAA--AAAGTTATAA---GAAA----TC--TACAAAGC--------TAGTTGG----------------------------------CCAAA-----ACTT-----------------TTT---T------------------TTT-TTTTAT--TAA-TTTTCT---ATC---------------------T-GT-GTTTTAA---AC---------------------GAGAAATTTGGTCTGGTTGAGCTGAAAGAGAAACTAATAG-------------TGATACATT--------TC--A-----AAATCGTACGAAATAAGA--------------------TTAGAACTATTGCTCGAAGCCTAGTTTGATTTA----AA-AGT---------TT---TTTC--A---TCTTGTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGAC
dm3 chr2L:2869501-2869745 - CTTGA-TAA--CGAAATCT------------------ACAAAAC--------TAATTGG----------------------------------CCAAA-----ACAA-----------------TTT-------------------------TTTTTAG--TAG-TTTT-----------------------------T-TT-TTTTTTA---AC---------------------GAGAAATTTGGTCTGTTTGATCTGATAGAGAAACTAATAG-------------TGATACATT--------TC--A-----AAATCGTACGAAATGAGA--------------------TTAGAATATTTGCTCGTAGCCTAGCCTGATTTT----AAAGTT---------TT---TTTT--A---TCTCGTTGCAGGAGGACATTTCCCCAGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGAC
droEre2 scaffold_4929:2916196-2916454 - CTTGA-TTA--AGAGCTAAAA---ATAA----TC--TGCAAGAC--------AAGTTGG----------------------------------CCAAA-----ACAA-----------------TTT-------------------------TTTTTTGTATAT-TTTA--A-TG---------------------TTT-CT-GTTTTAA---AC---------------------GAGAAATTTTGTCTGGTTGAGCTGAGAGAAAAACTAATAG-------------TGAGACATT--------TC--A-----AAATTATACGAAATAAGA--------------------TTCGACTTTTTGCTCGTAGCCTAGCTTGATTTA----AT-GCT---------A----TTTG--A---AATCGTTGCAGGAGGACATTTCGCCGGAGATTAGCATTCGCTTTGGTACCGAGTCGCTGAC
droYak3 2L:2864208-2864470 - CTTGA-TAA--GGAGTTTTT----AAAAA---CC--TGCAA-----AA-CAGAGATTCA----------------------------------CCAAA-----AGAAT----------------TTT-------------------------TTTTTAG--TAC-TTTTCTA---TG-------------------TTT-CA-GTTTTAA---AC---------------------TGGAAATTTTGTCTGGTTGCGCTGGAAGAAAAACTAAAAG-------------TGATACATT--------TC--A-----GAATTGTACGAAATAAGA--------------------TTAGAATATATGCTCATAGCCTAGCTTGATTTA----AT-GTT---------AT---TTTG--A---AATCGTTGCAGGAGGACATTTCGCCGGAGATTAGCATTCGCTTTGGTACCGAGTCGCTGAC
droEug1 scf7180000409554:3236695-3236959 + CTTGA-TAG--AT--TTAATT---AAAAA---AT--AGCGA-----AA-AAGGAATATG----------------------------------CCAAC-------TT-----------------TTT-------------------------TTTATTT--T--------------------------------------AT-ATTTTTA----A-GGAAATTTTT----TAGTACGTAGAATTTGGTCTGCTCTATGTGAAACTAAAACTAAAAG-------------TGATACATT--------TC--C-----AATATTTATTAAACTTAT--------------------TATGAATATTTATTCAATGCCTACTTAAATTTA----AT-TTA---------TT---TTGCGTATTTATTTCTTGCAGGAGGACATTTCCCCGGAAATCAGCATTCGCTTCGGTACCGAGTCCTTGAC
droBia1 scf7180000302188:1890332-1890614 - CTTGA-AAG--CGAGTTATAT---AAAAT---AT--AGCAAAAA-------AAGTTGTG----------------------------------CCAAA-----ACCT-----------------TTT-------------------------TTTT-AA----T-TTTTA----------------TAAAGAAT--ATT-AT-GTTTTCA---ACTGGAAATTTCTG---GGGTACATAGAATTTAGTCTGCTCTGAATGAAACTAAAAGTAAAAG-------------TGAGACATT--------TC--C-----AATAGTTAGATATCAAGA--------------------AAGGAATATTTAGACTTTGCCTACCATGATTTA----AT-GTT---------TT-CTATTT--A---TTTTATTGCAGGAGGACATTTCCCCGGAGATCAGCATTCGCTTTGGTCACGAGTCGTTGAC
droTak1 scf7180000412794:58454-58747 + CTTGA-TAG--CAAGTTGTAT---AAAAAAAAGATGTACTA---AAAACAAAAGAGTTG----------------------------------CCAAA-----AATTT----------------TAT-------------------------TTTTTAA--TAT-TTTTTTA---TA---------------GA--TTT-AT-GATTTCA---ACTGGGAATTTCTG---TCGTACATAGAATTTAGTCTGCTTGGGATGAAACTGAAACTAAAAA-------------TGAAATGTT--------TA--C-----TAGAATCGCAAAATTAGT--------------------TTGGAATATTTAGACGTGGCCTACCATGATTTA----AT-TTT---------AA-CTTTTT--T---AATTCTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGCTTCGGTCACGAGTCCCTGAC
droEle1 scf7180000491273:289025-289303 + CTTGA-CAG--CGAATTTTATAAAAAAAA---AT--TGCAA-----AA-AAGAAATATG----------------------------------CCAAA-----TACT-----------------TTT-------------------------TTTTTA-----C-TTTT----------------------------------G---TATATTACAAGAAATTTCTGTC-GCGTACAAAAAATTTAGTCTGCTTTACATGAAGCTAAAATAAAAAG-------------TGATTAATG--------TC--T-----ACAATTTATAACATTAGA--------------------TTGGAATTACTTGGCTTAGCCTACCTGGATTAA----AT-GTC----TTTT-AT----TTT--ATTTAATTATTGCAGGAGGACATTTCGCCGGAAATAAGCATTCGTTTTGGTCACGAGTCCTTGAC
droRho1 scf7180000777055:18885-19143 - CTTGA-CAG--CGAGTTATAT---AAAAA---AT--TGCAA-----AA-AAAAAATGCG----------------------------------ACAAA-----A--T-----------------TAT-------------------------TTTTTAC--TA------------------------------------------TTTTA---ACAAGAAATTT-------CGTACTTCAAATTTAGTCTGCTTTAGATGAAACTAAAAATAAAAG-------------TGATACATT--------TC--A-----AACACTTTTTAATTTAGA--------------------TTAGAATATTTTCGCTTAGCCTACCTAGCTTTA----AC-TTT---------AT-----TT--ATCTCATTATTGCAGGAGGACATTTCCCCGGAAATAAGCATTCGCTTCGGACACGAGTCCCTGAC
droFic1 scf7180000453924:842596-842872 - CTTGG-TGG--CGGGTTCTAT---AAAAA---GT--TGCAA-----AAGAAAGGATGTG----------------------------------CCAAA-----AACTT----ATTT--------T------------------TACGCTTTTTT-TTT-------------AT---------------------GGTT-TTT-A-TTTTA---ACTGGAAATTTCCC---TTGGACACAGAATTTAGTCTGCTTTTTACGAAACTAAAACTAAAAA-------------TGATCCATT--------TC--A-----TTCGTTTATCGAATTAGA--------------------TAAG---------GCTTAGCCAACCTTGATTGA----AC-GTT---------TCGTTGTTT--G---TCTTATTGCAGGAGGACATTTCCCCGGAAATCAGCATTCGCTTCGGTAACGAGTCCCTGAC
droKik1 scf7180000302468:1234520-1234806 - TTTGA-AGG--CAGTTTATATTAAAAAGT----A--ATCAA-----GA-------------------------------CAAGAATAGAGATCCCGTT-----A---------------------------------------TATATTT--TT-----------TTT--------------------------GGTT-TTTTT-TTTAC---ACCAAGAATTTTTGTATTAAAACATAGAATTTCGTCTGCTCTGCAAGAAATGAAAACTACAAA-------------TGTGATTAT--------TA--C-----GTATTACCCAAAATTAAA--------------------TAGGAATTTACAAGCGTGGCCTACCTTGATTAA----TT-TTTTGTTTGTT-AC---TTTA--C---TTTTTTTATAGGAGGACATTTCACCCGAAATTAGCATTCGCTTTGGAAACGAGTCTCTGAC
droAna3 scaffold_12916:732425-732684 - CTTGG-TGG--AAAACTATCG---A---------------AAT--------CAAATAGC----------------------------------CCGAA-----AAAATT---------------TTTTTTT------------------TTT---------TGTTTTT--------------------------AGTT-TTTGG-GTTTG---ACCAAAAATTTTT----ACGTACA-AAAATTTTGTCTGCTTTAGATGAATCTATTACTAAAAC-------------TGGTAGC----------TCCAC------ATTCC-------TGGGC--------------------TCGGAACCAGTATTCCTTGCCTACCTTGATGGA----AA-ATA--A------TT--GTGTG--A---TTTGCTTGCAGGAGGATATCTCGCCGGAAATCAACATTCGCTTCGGCCACGAGTCCCTCAC
droBip1 scf7180000396554:1539258-1539493 + CTTGC-CAA--GAAGTT-----------------------------------------------------------------------------------------------------------TTT---T------------------TTT-TG--------TTTTTA--G-TT---------------------TTT-TT-G-GGTTG---ACCAAAAATTTAT----ATTTACAACAAATTTTGTCTGCTTTTTATGAATCTGTGACTAAAAC-------------TGATAGTT---------TC-AC------ATGCT-------TCTGC--------------------TTGAAACCATTATTCCTTGCCTACCTTGATTCA----TT-TATTAAT-----TCA-TTGGT--T---TTTGATTCCAGGAGGATATTTCACCAGAAATCAACATTCGTTTCGGCCACGAGTCTCTCAC
dp5 4_group4:4342138-4342462 + TTCAA-TCG--AAAAGAATTC---AAAAT---GT--TGCAA-----AA---------------------------GTTACAAGAAACGATAA-CCAAATTGAATCAATTTTT---------------TATTTTTGGAATTTTGTACACTTTTTT------------TT--------------------------GGTT-ACT-ATTTTTTACTAC-AAAAATTTAT----CTGATCATAGAATTTGGTCTATTCTATACGGAACTAAAACTTAAAA-------------TGAGGAAAATTAGCATTTCCCCTTACAAAA--TATCGAAAATTGA--------------------TTTGAATTTCCATTCCATGCCTATTCGA-TGTTACGAAAAATG---------TT---CTGT--G---TATTATTTCAGGAGGACATTTCTCCGGAAATCAACATTCGCTTTGGCACGGAGTCCTTGAC
droPer2 scaffold_10:3382995-3383318 + TTCAA-TCG--AAAAGAATTC---AAAAT---GT--TGCAA-----AA---------------------------GTTACAAGAAACGATAA-CCAAATTGAATCAATTTTT---------------TATTTTTGGAATTTTGTACACTTTT-------------TTT--------------------------GGTT-ACT-ATTTTTTACTAC-AAAAATTTAT----CTGATCATAGAATTTGGTCTATTCTATACGGAACTAAAACTTAAAA-------------TGAGGAAAATTAGCATTTCCCCTTACAAAA--TATCGAAAATTGA--------------------TTTGAATTTCCATTCCATGCCTATTCGA-TGTTACGAAAAATG---------TT---CTGT--G---TATTATTTCAGGAGGACATTTCTCCGGAAATCAACATTCGCTTTGGCACGGAGTCCTTGAC
droWil2 scf2_1100000004585:5921980-5922074 + ATTTTACAAATTTAACTGTAT---AAAAA----G--GCCAA---AAA-----------ACCAAAACACTGCAGAATTTTT----AACGATA------ATTTATCC-----------------------------------------------------------------------C---------------------C-TT-TTTTTGT---AC---------------------TAGAATTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12726:2515471-2515755 + TTTGA-AGG--CCGGCTTAAA---GAAAT---AT--TGCTG------------------------------------------------------------------------TTTTTGGGTTTTAT-------------------------TTTTTTA--TAT-TTTTTT---TTTTAAATTTTATAATTATC--CTT-TT-AAGT------------------------TCCACATAAAATTTTGAGCGGCTCAAGAAAGAGTAAAACTAATAT-------------AAATAGTTG-----------------------ATAGAGAATTTGTTAAGAGCTAGAAGTTTTCGGTCTGAAATTTGTGTCGACGCTTGCTAAA-TATG----AC-GCC----T-TTATA---TTGT--G---TGACCATGCAGGAGGATATATCGCCTGAGATCAATATACGTTTCGGACACGATGCGCTCAC
droMoj3 scaffold_6500:14431302-14431558 + CTTGA-AGG--CCTGATAAAA---GAATT---A-------------------------------------------------------------------------------------------TTA---T------------------TTT-TTTTTT--------CA--A-TT---------------------TTC-AA-------AGTTTT-TAAAATTTTTTTT-CTGATTTTGGAATTTAGTGTTCCCTAAGAAAAAGTAAAACAAGGTTTAGTAATTTTAGGGGGAATTTT--------TC--T-----AAGACCTAAAAATTTC-------------------TCAACTGAAAATTCTCTCGACGCTTACTAAAAAT----------TT---------CA---ATTT--G---TTATTCTACAGGAGGATATTTCGCCTGAGATCAGCATTCGCTTCGGACATGATTCTCTCAC
droGri2 scaffold_15252:3434859-3435092 + TTTAA-AGA--TC-----------------------AACGA-----AAC---AAAGAAG----------------------------------ATAAA-----AGTCT----AGTT--------TTT---T------------------TTT-TT--------TTTTTA--A-TA---------------------TTT-TT-------AATTTA-GAGAATTTC--------TACATTAAATTTTGTTTGTGCTGA--TAAAGT------AAAGC-------------TGATTAAAT--------GC--C----------AGACATGATGTGA--------------------ATGA-AATATGTTTCCAAGCTTACTAAATTGT-------------------------AATT--G---TTGAATTTCAGGAGGATATCTCGCCAGAGATTAATATACGTTTCGGACAGGACGCGCTCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTGA-TAA--AAAGTTATAA---GAAA----TC--TACAA-----A-----------G----------------------------------CCAAA-----CCTT-----------------TTT-------------------------TTTTTAT--TAT-TTTTCT---ATC---------------------T-GT-GTTTTAA---AC---------------------GAGAAATTTGGTCTGGTTGAGCTGAAAGAGAAACTAATAG-------------TGATACATT--------TC--A-----AAATCGTACGAAATAAGA--------------------TTAGAACTATTGCTCGAAGCCTAGTTTGATTTA----AA-AGT---------TT---TTTT--A---TCTTGTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCATTCGTTTCGGTACC...........2114.00422000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCGAG........2212.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCATTCGTTTCGGTACC...........2012.00211000000000000000
............................................................................................................................................................................................................................................GAGAAATTTGGTCTGGTTGAGCTG..............................................................................................................................................................................................................................2412.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTACCGAGTCGCTGAC2011.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCGAC........2211.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTTCGGTACCGAGTCGCTGAC2611.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACCGA.........2411.00100100000000000000
...............................................................................................................................................................................................................TAA---AC---------------------GAGAAATTTGGTCTGG......................................................................................................................................................................................................................................2111.00100001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GAACTATTGCTCGAAGCCTAG........................................................................................................2111.00100000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCCCGGAGATTAGC..........................1811.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCGGTACCGAGTCGCTG..2111.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACC...........2211.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCATTCGTTTCGGTA.............1811.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCGGTACCGAGT.......1520.50100000001000000000
droSec2
CTTGA-TAA--AAAGTTATAA---GAAA----TC--TACAAAGC--------TAGTTGG----------------------------------CCAAA-----ACTT-----------------TTT---T------------------TTT-TTTTAT--TAA-TTTTCT---ATC---------------------T-GT-GTTTTAA---AC---------------------GAGAAATTTGGTCTGGTTGAGCTGAAAGAGAAACTAATAG-------------TGATACATT--------TC--A-----AAATCGTACGAAATAAGA--------------------TTAGAACTATTGCTCGAAGCCTAGTTTGATTTA----AA-AGT---------TT---TTTC--A---TCTTGTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTTCCCCGGAGATTAG...........................2011.0010010
.........................................................................................................................................................................................................................................................................................................................................................................TATTGCTCGAAGCCTAGTTTG....................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTCCCCGGAGATTAGC..........................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTAGCATTCGTTTCGGT..............2111.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACC...........2211.0011000
...............................................................................................................................................................................................................................................AAATTTGGTCTGGTTGAGCTG..............................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................AATTTGGTCTGGTTGAGCTGA.............................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................A--------------------TTAGAACTATTGCTCGAAGC............................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTCGTTTCGGTACCGAGT.......2211.0010100
dm3
CTTGA-TAA--CGAAATCT------------------ACAAAAC--------TAATTGG----------------------------------CCAAA-----ACAA-----------------TTT-------------------------TTTTTAG--TAG-TTTT-----------------------------T-TT-TTTTTTA---AC---------------------GAGAAATTTGGTCTGTTTGATCTGATAGAGAAACTAATAG-------------TGATACATT--------TC--A-----AAATCGTACGAAATGAGA--------------------TTAGAATATTTGCTCGTAGCCTAGCCTGATTTT----AAAGTT---------TT---TTTT--A---TCTCGTTGCAGGAGGACATTTCCCCAGAGATTAGCATTCGTTTCGGTACCGAGTCGCTGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCAGAGATTAGCATTCGTTTCGG...............26110.00100000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTCGTTTCGGTACCGAG........2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000130000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCGGTACCGAGTCGCTGAC2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCCCAGAGATTAGCATTC......................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCGTTTCGGTACCGAGT.......2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000002000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACCGAGTC......2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCAGAGATTAGCATTCGT....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCAGAGATTAGCATTCG.....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TT---------TT---TTTT--A---TCTCGTTGCAG..................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................TC--A-----AAATCGTACGAAATGAGA--------------------................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
.........................................................GG----------------------------------CCAAA-----ACAA-----------------TTT-------------------------TTTTTA....................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCGGTACCGAGTCGCTGA.2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTCGGTACCGAGTCGC....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCGAGTCGCT...2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTGCTCGTAGCCTAGCCTGA...................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCAGAGATTAGCATTCGTTTCGG...............2712.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCGGTACCGAGTCGCTGA.2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTCGGTACCGAGTCGCTGA.2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000
.....................................................................................................................................................................................................................................................GGTCTGTTTGATCTGATAGAG........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTACCGATC.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGATTAGCATTCGTTTC.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCAGAGATTAGCATTCGT....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCGTTTCGGTACCGAGTCGC....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTACCGAGTCGCTGAC2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGCAGGAGGACATTTCCC.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGAGATTAGCATTCGTTTCGGT..............2511.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTCCCCAGAGATTAGCA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGACATTTCCCCAGAGATTAGCATC.......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGATCTGATAGAGAAACTAAT................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAGATTAGCATTCGTTTCG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TT---TTTT--A---TCTCGTTGCAGGA................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATTTCCCCAGAGATTAGC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCAGAGATTAGCATTCGTT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................TGATAGAGAAACTAATAG-------------TGAA.............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCATTCGTTTCGGTACC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGTACCGAGTCGCTGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGACATTTCCCCAGAGATTAGC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCAGAGATTAGCATTCGTTTCGGT..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCAGAGATTAGCATTCG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTT--A---TCTCGTTGCAGGAGGA.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCCAGAGATTAGCATTCGTT...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAGATTAGCATTCGTTTCGGTACC...........2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCCCAGAGATTAGCAT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTT--A---TCTCGTTGCAGGAGGAC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCGGTACCGAGTCGCTG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCG..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................T---------TT---TTTT--A---TCTCGTTGCAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................C--A-----AAATCGTACGAAATGAGA--------------------T...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCCAGAGATTAGCATTCGTTTCGG...............2811.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTT---------TT---TTTT--A---TCTCGTTGCAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTAGCATTCGTTTCGG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGTACCGAGTCGCTGAC2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTGATCTGATAGAGAAACTA..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TT---------TT---TTTT--A---TCTCGTTGCA...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TATTTGCTCGTAGCCTAGCCTGATTT................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTCGGTACCGAGTCGCTGA.2311.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTCGGTACCGAGTCGCTGAC2511.0010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTTCGGTACCGAGTC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CTGTTTGATCTGATAGAGAAAA....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCAGAGATTAGCATT.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCATTCGTTTCGGTACCG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCAGAGATTAGCATTCGTTTCGG...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCCAGAGATTAGCATTCG.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CGAAATGAGA--------------------TTAGAATATTT.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTAGCATTCGTTTCGGTACCGAG........2711.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGAGATTAGCATTCGTTT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCAGAGATTAGCATTCGTT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGTTTCGGTAC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AAGTT---------TT---TTTT--A---TCTCGTTGCAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATTCGTTTCGGTACCGAGTC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTACCGAGTCGCATC.1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTTGA-TTA--AGAGCTAAAA---ATAA----TC--TGCAAGAC--------AAGTTGG----------------------------------CCAAA-----ACAA-----------------TTT-------------------------TTTTTTGTATAT-TTTA--A-TG---------------------TTT-CT-GTTTTAA---AC---------------------GAGAAATTTTGTCTGGTTGAGCTGAGAGAAAAACTAATAG-------------TGAGACATT--------TC--A-----AAATTATACGAAATAAGA--------------------TTCGACTTTTTGCTCGTAGCCTAGCTTGATTTA----AT-GCT---------A----TTTG--A---AATCGTTGCAGGAGGACATTTCGCCGGAGATTAGCATTCGCTTTGGTACCGAGTCGCTGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACATTTCGCCGGAGATTAGCA.........................2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGAGATTAGCATTCGCT...................2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................TTA----AT-GCT---------A----TTTG--A---AATCGTTGCAG..................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTACCGAGTCGCTGAC2211.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTTTGGTACCGAGTCGCTGA.2511.0010000100
..............................................................................................................................................................................................................................................GAAATTTTGTCTGGTTGAGCTGAGA...........................................................................................................................................................................................................................2511.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATTTCGCCGGAGATT.............................2111.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATTTCGCCGGAGATTAGCATTCGC....................2811.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGATTAGCATTCGCTTTG................2111.0011000000
droYak3
CTTGA-TAA--GGAGTTTTT----AAAAA---CC--TGCAA-----AA-CAGAGATTCA----------------------------------CCAAA-----AGAAT----------------TTT-------------------------TTTTTAG--TAC-TTTTCTA---TG-------------------TTT-CA-GTTTTAA---AC---------------------TGGAAATTTTGTCTGGTTGCGCTGGAAGAAAAACTAAAAG-------------TGATACATT--------TC--A-----GAATTGTACGAAATAAGA--------------------TTAGAATATATGCTCATAGCCTAGCTTGATTTA----AT-GTT---------AT---TTTG--A---AATCGTTGCAGGAGGACATTTCGCCGGAGATTAGCATTCGCTTTGGTACCGAGTCGCTGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTCGCTTTGGTACCGAGTCGCTG..2711.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACATTTCGCCGGAGATTAGC..........................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTTCGCCGGAGATTAGCATTC......................2511.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTCGCCGGAGATTAGCATTC......................2411.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCGCCGGAGATTAGC..........................1911.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATTTCGCCGGAGATT.............................1911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTACCGAGTCGCTGA.2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTTTGGTACCGAGT.......1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGCCGGAGATTAGCATTCG.....................2311.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCATTCGCTTTGGTACCGA.........2411.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATTCGCTTTGGTACCGAGT.......2311.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCGCTTTGGTACCGAGT.......2111.00100100000000
droEug1
CTTGA-TAG--AT--TTAATT---AAAAA---AT--AGCGA-----AA-AAGGAATATG----------------------------------CCAAC-------TT-----------------TTT-------------------------TTTATTT--T--------------------------------------AT-ATTTTTA----A-GGAAATTTTT----TAGTACGTAGAATTTGGTCTGCTCTATGTGAAACTAAAACTAAAAG-------------TGATACATT--------TC--C-----AATATTTATTAAACTTAT--------------------TATGAATATTTATTCAATGCCTACTTAAATTTA----AT-TTA---------TT---TTGCGTATTTATTTCTTGCAGGAGGACATTTCCCCGGAAATCAGCATTCGCTTCGGTACCGAGTCCTTGACSizeHit CountTotal NormTotal
No Reads
droBia1
CTTGA-AAG--CGAGTTATAT---AAAAT---AT--AGCAAAAA-------AAGTTGTG----------------------------------CCAAA-----ACCT-----------------TTT-------------------------TTTT-AA----T-TTTTA----------------TAAAGAAT--ATT-AT-GTTTTCA---ACTGGAAATTTCTG---GGGTACATAGAATTTAGTCTGCTCTGAATGAAACTAAAAGTAAAAG-------------TGAGACATT--------TC--C-----AATAGTTAGATATCAAGA--------------------AAGGAATATTTAGACTTTGCCTACCATGATTTA----AT-GTT---------TT-CTATTT--A---TTTTATTGCAGGAGGACATTTCCCCGGAGATCAGCATTCGCTTTGGTCACGAGTCGTTGACSizeHit CountTotal NormTotal
No Reads
droTak1
CTTGA-TAG--CAAGTTGTAT---AAAAAAAAGATGTACTA---AAAACAAAAGAGTTG----------------------------------CCAAA-----AATTT----------------TAT-------------------------TTTTTAA--TAT-TTTTTTA---TA---------------GA--TTT-AT-GATTTCA---ACTGGGAATTTCTG---TCGTACATAGAATTTAGTCTGCTTGGGATGAAACTGAAACTAAAAA-------------TGAAATGTT--------TA--C-----TAGAATCGCAAAATTAGT--------------------TTGGAATATTTAGACGTGGCCTACCATGATTTA----AT-TTT---------AA-CTTTTT--T---AATTCTTGCAGGAGGACATTTCCCCGGAGATTAGCATTCGCTTCGGTCACGAGTCCCTGACSizeHit CountTotal NormTotal
No Reads
droEle1
CTTGA-CAG--CGAATTTTATAAAAAAAA---AT--TGCAA-----AA-AAGAAATATG----------------------------------CCAAA-----TACT-----------------TTT-------------------------TTTTTA-----C-TTTT----------------------------------G---TATATTACAAGAAATTTCTGTC-GCGTACAAAAAATTTAGTCTGCTTTACATGAAGCTAAAATAAAAAG-------------TGATTAATG--------TC--T-----ACAATTTATAACATTAGA--------------------TTGGAATTACTTGGCTTAGCCTACCTGGATTAA----AT-GTC----TTTT-AT----TTT--ATTTAATTATTGCAGGAGGACATTTCGCCGGAAATAAGCATTCGTTTTGGTCACGAGTCCTTGACSizeHit CountTotal NormTotal
No Reads
droRho1
CTTGA-CAG--CGAGTTATAT---AAAAA---AT--TGCAA-----AA-AAAAAATGCG----------------------------------ACAAA-----A--T-----------------TAT-------------------------TTTTTAC--TA------------------------------------------TTTTA---ACAAGAAATTT-------CGTACTTCAAATTTAGTCTGCTTTAGATGAAACTAAAAATAAAAG-------------TGATACATT--------TC--A-----AACACTTTTTAATTTAGA--------------------TTAGAATATTTTCGCTTAGCCTACCTAGCTTTA----AC-TTT---------AT-----TT--ATCTCATTATTGCAGGAGGACATTTCCCCGGAAATAAGCATTCGCTTCGGACACGAGTCCCTGACSizeHit CountTotal NormTotal
No Reads
droFic1
CTTGG-TGG--CGGGTTCTAT---AAAAA---GT--TGCAA-----AAGAAAGGATGTG----------------------------------CCAAA-----AACTT----ATTT--------T------------------TACGCTTTTTT-TTT-------------AT---------------------GGTT-TTT-A-TTTTA---ACTGGAAATTTCCC---TTGGACACAGAATTTAGTCTGCTTTTTACGAAACTAAAACTAAAAA-------------TGATCCATT--------TC--A-----TTCGTTTATCGAATTAGA--------------------TAAG---------GCTTAGCCAACCTTGATTGA----AC-GTT---------TCGTTGTTT--G---TCTTATTGCAGGAGGACATTTCCCCGGAAATCAGCATTCGCTTCGGTAACGAGTCCCTGACSizeHit CountTotal NormTotal
No Reads
droKik1
TTTGA-AGG--CAGTTTATATTAAAAAGT----A--ATCAA-----GA-------------------------------CAAGAATAGAGATCCCGTT-----A---------------------------------------TATATTT--TT-----------TTT--------------------------GGTT-TTTTT-TTTAC---ACCAAGAATTTTTGTATTAAAACATAGAATTTCGTCTGCTCTGCAAGAAATGAAAACTACAAA-------------TGTGATTAT--------TA--C-----GTATTACCCAAAATTAAA--------------------TAGGAATTTACAAGCGTGGCCTACCTTGATTAA----TT-TTTTGTTTGTT-AC---TTTA--C---TTTTTTTATAGGAGGACATTTCACCCGAAATTAGCATTCGCTTTGGAAACGAGTCTCTGACSizeHit CountTotal NormTotal
No Reads
droAna3
CTTGG-TGG--AAAACTATCG---A---------------AAT--------CAAATAGC----------------------------------CCGAA-----AAAATT---------------TTTTTTT------------------TTT---------TGTTTTT--------------------------AGTT-TTTGG-GTTTG---ACCAAAAATTTTT----ACGTACA-AAAATTTTGTCTGCTTTAGATGAATCTATTACTAAAAC-------------TGGTAGC----------TCCAC------ATTCC-------TGGGC--------------------TCGGAACCAGTATTCCTTGCCTACCTTGATGGA----AA-ATA--A------TT--GTGTG--A---TTTGCTTGCAGGAGGATATCTCGCCGGAAATCAACATTCGCTTCGGCCACGAGTCCCTCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACATTCGCTTCGGCC.............2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCGCTTCGGCCACGA.........2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCGCTTCGGCCACGAGT.......2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACATTCGCTTCGGCCA............2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGAAATCAACATTCG.....................1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCAACATTCGCTTCG................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTCGGCCACGAGTCCCT...2111.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATCAACATTCGCTTCGGCCACGA.........2711.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACATTCGCTTCGGCCACGA.........2411.001010000
......................................................................................................................................................................................................................................................................................................GC----------TCCAC------ATTCC-------TGGGC--------------------TCGG............................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................AC-------------TGGTAGC----------TCCAC------ATTCC-------TG.......................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTTCGGCCACGAGTCCCT...2311.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTTCGGCCACGAGTCCCTC..2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCTTCGGCCACGAGTC......2111.001000010
droBip1
CTTGC-CAA--GAAGTT-----------------------------------------------------------------------------------------------------------TTT---T------------------TTT-TG--------TTTTTA--G-TT---------------------TTT-TT-G-GGTTG---ACCAAAAATTTAT----ATTTACAACAAATTTTGTCTGCTTTTTATGAATCTGTGACTAAAAC-------------TGATAGTT---------TC-AC------ATGCT-------TCTGC--------------------TTGAAACCATTATTCCTTGCCTACCTTGATTCA----TT-TATTAAT-----TCA-TTGGT--T---TTTGATTCCAGGAGGATATTTCACCAGAAATCAACATTCGTTTCGGCCACGAGTCTCTCACSizeHit CountTotal NormTotal
No Reads
dp5
TTCAA-TCG--AAAAGAATTC---AAAAT---GT--TGCAA-----AA---------------------------GTTACAAGAAACGATAA-CCAAATTGAATCAATTTTT---------------TATTTTTGGAATTTTGTACACTTTTTT------------TT--------------------------GGTT-ACT-ATTTTTTACTAC-AAAAATTTAT----CTGATCATAGAATTTGGTCTATTCTATACGGAACTAAAACTTAAAA-------------TGAGGAAAATTAGCATTTCCCCTTACAAAA--TATCGAAAATTGA--------------------TTTGAATTTCCATTCCATGCCTATTCGA-TGTTACGAAAAATG---------TT---CTGT--G---TATTATTTCAGGAGGACATTTCTCCGGAAATCAACATTCGCTTTGGCACGGAGTCCTTGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCGCTTTGGCACGGAGT.......2312.0020110000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATTTCTCCGGAAAT..............................2011.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCGCTTTGGCACGGAGTC......2311.0010000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCTTTGGCACGGA.........1811.0010000100000
....................................................................................................................................................................................................................................................TGGTCTATTCTATACGGAACT.........................................................................................................................................................................................................................2111.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTTGGCACGGAGTCCT....1911.0010100000000
.........................................................................................................................................................................................................................AAAATTTAT----CTGATCATAGA.................................................................................................................................................................................................................................................2011.0010000000010
.............................................................................................................................................................................................................................................................CTATACGGAACTAAAACTTAA................................................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCGCTTTGGCACGGAG........2111.0010100000000
.........................................................................................................................................................................................................................................................................................................ATTAGCATTTCCCCTTACAAA....................................................................................................................................................................2111.0010000001000
.................................................................................................................................TTTTTGGAATTTTGTACAC..............................................................................................................................................................................................................................................................................................................................................1911.0010000000010
..........................................................................................................................................................................................................................AAATTTAT----CTGATCATAGAAT...............................................................................................................................................................................................................................................2111.0010000000010
droPer2
TTCAA-TCG--AAAAGAATTC---AAAAT---GT--TGCAA-----AA---------------------------GTTACAAGAAACGATAA-CCAAATTGAATCAATTTTT---------------TATTTTTGGAATTTTGTACACTTTT-------------TTT--------------------------GGTT-ACT-ATTTTTTACTAC-AAAAATTTAT----CTGATCATAGAATTTGGTCTATTCTATACGGAACTAAAACTTAAAA-------------TGAGGAAAATTAGCATTTCCCCTTACAAAA--TATCGAAAATTGA--------------------TTTGAATTTCCATTCCATGCCTATTCGA-TGTTACGAAAAATG---------TT---CTGT--G---TATTATTTCAGGAGGACATTTCTCCGGAAATCAACATTCGCTTTGGCACGGAGTCCTTGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................AAATTTAT----CTGATCATAGAAT...............................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCGCTTTGGCACGGAGTCCTTG..2711.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCTTTGGCACGGAGTCCTT...2411.001010000
droWil2
ATTTTACAAATTTAACTGTAT---AAAAA----G--GCCAA---AAA-----------ACCAAAACACTGCAGAATTTTT----AACGATA------ATTTATCC-----------------------------------------------------------------------C---------------------C-TT-TTTTTGT---AC---------------------TAGAATTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTTGA-AGG--CCGGCTTAAA---GAAAT---AT--TGCTG------------------------------------------------------------------------TTTTTGGGTTTTAT-------------------------TTTTTTA--TAT-TTTTTT---TTTTAAATTTTATAATTATC--CTT-TT-AAGT------------------------TCCACATAAAATTTTGAGCGGCTCAAGAAAGAGTAAAACTAATAT-------------AAATAGTTG-----------------------ATAGAGAATTTGTTAAGAGCTAGAAGTTTTCGGTCTGAAATTTGTGTCGACGCTTGCTAAA-TATG----AC-GCC----T-TTATA---TTGT--G---TGACCATGCAGGAGGATATATCGCCTGAGATCAATATACGTTTCGGACACGATGCGCTCACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATATCGCCTGAGATCAAT..........................2220.501000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACGTTTCGGACACGATGC......2220.501100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCGGACACGATGCGCT...2020.501000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................ATAAAATTTTGAGCGGCTC...................................................................................................................................................................................................................................1920.501100000000000000000000000000000000000000000000000000000000000000
...............CTTAAA---GAAAT---AT--TGCTG------------------------------------------------------------------------TTT..............................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACGTTTCGGACACGATGC......2120.501000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACGTTTCGGACACGATG.......2120.501000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGATATATCGCCTGA.................................1920.501000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGTTTCGGACACGATGCGCT...2320.501000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AT-------------AAATAGTTG-----------------------ATAGAGAATTTGTTAAGAGCT............................................................................................................................................3220.501000000000000000000000000000000000000000000010000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGATATATCGCCTGAGATC.............................2320.501000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCAATATACGTTTCGGAC.............2220.501010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAATATACGTTTCGGAC.............2120.501001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACGTTTCGGACACGATGCGC....2420.501001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGAGCGGCTCAAGAAAGAGTG........................................................................................................................................................................................................................2120.501000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TAAAATTTTGAGCGGCTCAAG................................................................................................................................................................................................................................2120.501000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATACGTTTCGGACACGATGC......2420.501000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCCTGAGATCAATAT........................2020.501000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCTGAGATCAATATACGT....................2220.501000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCTGAGATCAATATAC......................2020.501000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGTTTCGGACACGATGC......2020.501000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AATAT-------------AAATAGTTG-----------------------ATAGAGA..........................................................................................................................................................2120.501000000000000000100000000000000000000000000000000000000000000000
droMoj3
CTTGA-AGG--CCTGATAAAA---GAATT---A-------------------------------------------------------------------------------------------TTA---T------------------TTT-TTTTTT--------CA--A-TT---------------------TTC-AA-------AGTTTT-TAAAATTTTTTTT-CTGATTTTGGAATTTAGTGTTCCCTAAGAAAAAGTAAAACAAGGTTTAGTAATTTTAGGGGGAATTTT--------TC--T-----AAGACCTAAAAATTTC-------------------TCAACTGAAAATTCTCTCGACGCTTACTAAAAAT----------TT---------CA---ATTT--G---TTATTCTACAGGAGGATATTTCGCCTGAGATCAGCATTCGCTTCGGACATGATTCTCTCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATTCGCTTCGGACATG..........2212.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTTCGGACATGATT.......1911.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATTCGCTTCGGACATGA.........2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATTCGCTTCGGACATGATT.......2311.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCAGCATTCGCTTCGGACA............2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTTCGGACATGATTCT.....2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTCGGACATGATTCT.....1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGATCAGCATTCGCTTC.................2111.001000010
droGri2
TTTAA-AGA--TC-----------------------AACGA-----AAC---AAAGAAG----------------------------------ATAAA-----AGTCT----AGTT--------TTT---T------------------TTT-TT--------TTTTTA--A-TA---------------------TTT-TT-------AATTTA-GAGAATTTC--------TACATTAAATTTTGTTTGTGCTGA--TAAAGT------AAAGC-------------TGATTAAAT--------GC--C----------AGACATGATGTGA--------------------ATGA-AATATGTTTCCAAGCTTACTAAATTGT-------------------------AATT--G---TTGAATTTCAGGAGGATATCTCGCCAGAGATTAATATACGTTTCGGACAGGACGCGCTCACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCGGACAGGACGCG.....1811.00110

Generated: 05/19/2015 at 12:10 AM