ID:

dsi_26773

 Coordinate:

x:8689389-8689581 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.0 -32.0 -32.0

Flybase annnotation

exon [x_8689582_8689908_+]; CDS [x_8689582_8689908_+]; exon [x_8688749_8689388_+]; CDS [x_8688749_8689388_+]; intron [x_8689389_8689581_+]

No Repeatable elements found

mature
  1. 2l:16796949-16796963 +
  2. 2l:19636735-19636749 -
  3. 2r:6071720-6071734 +
  4. 2r:8772832-8772846 +
  5. 3l:9284081-9284095 +
  6. 3l:11875413-11875427 -
  7. 3l:23799710-23799724 +
  8. 3l:23837319-23837333 +
  9. 3l:23839528-23839542 +
  10. dsi_26773  x:8689462-8689476 +
  11. x:20280614-20280628 -
  12. node_128537:74-88 +
  13. node_10333:1917-1931 -
  14. node_12499:1247-1261 -
  15. node_27411:1032-1046 -
  16. node_9849:2407-2421 +
  17. node_35678:61-75 +
  18. node_44665:729-743 -
  19. node_39647:2510-2524 +
  20. node_17062:1035-1049 +
star

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGATCGACTCGATGGCCAACTCCTTTGTGGGCACCCGAAGCTATATGTCGGTAAGTAACTGGAAAGCTGATCAAAATCTATAATTTAGTGTATTAAACTACGGAAGGTTGATGAAATCGGCGAAAGTATTTGAAAAAGAACATTGCAATAGCGAAACAAGGAACTCATCTATGCACAGATGCTAAAAATAGCCAACTATAAGTGATCTATATAACTCACATGCTAATGTCTTCTTTGTTTCAGCCGGAGCGACTGCAAGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC
**************************************************.((((((.((.....((((((((.(((((......((((.......))))....)))))..)))..)))))...))))))))............((....))(((((((((((..(((.((.(((.....((((....)))).........((((..........)))).))))))))..)))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.........................TGTGGGCACTCGAAGATA.......................................................................................................................................................................................................................................................... 18 2 9 5.00 45 44 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................................CGGAGCGACTGCAAGGCACCCACTACT...................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................ACCCACTACTCCGTGCAGTCGGAC........ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........ATGGCCAACTCCTTTGTGG....................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................GGAGCGACTGCAAGGCACCCAC.......................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................CGGAGCGACTGCAAGGCACC............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TGTTTTAGCCGGAGCGACTCCACGG................................. 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................TGTGGGCACCCGAAGATACG........................................................................................................................................................................................................................................................ 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CGACTCCGTGAAGTCGGA......... 18 2 4 0.50 2 0 0 0 0 0 0 0 1 1
.........................TGTGGGCACTCGAAGCT........................................................................................................................................................................................................................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................CTACTACTCCATGCCGTCGGA......... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0
.......................................GGTAAATGTCGGTAAGTCACT......................................................................................................................................................................................................................................... 21 3 4 0.50 2 0 0 0 2 0 0 0 0 0
........................................GTAAATGTCGGTAAGTCACT......................................................................................................................................................................................................................................... 20 3 7 0.29 2 0 0 0 2 0 0 0 0 0
.............................................................................................................GATGAAAACGGCGAAA........................................................................................................................................................................ 16 1 4 0.25 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................AAGTATTTGAAAAAG........................................................................................................................................................... 15 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................CTCAGCGCGGTCGGACATC..... 19 3 7 0.14 1 0 0 1 0 0 0 0 0 0
..........................................AAATGTCGGTAAGTCACT......................................................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 0 1 0 0 0 0 0
.........................TGTGGGCACTCGAAGATACA........................................................................................................................................................................................................................................................ 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0
..........................GTGGGCACTCGAAGATA.......................................................................................................................................................................................................................................................... 17 2 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TGTTTTAGCCGGAGCG.......................................... 16 1 12 0.08 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................ACTCCGTGAAGTCGGAA........ 17 2 12 0.08 1 0 0 1 0 0 0 0 0 0
..........................................ATACGTCGGTAAGTACCA......................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CGACCCCGTGAAGTCGGA......... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0
.........................................AATACGTCGGTAAGTACC.......................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0
..........................................................CTGAGAAGCTGATCAAACT........................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TGTTTTAGCCGGAGC........................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACTAGCTGAGCTACCGGTTGAGGAAACACCCGTGGGCTTCGATATACAGCCATTCATTGACCTTTCGACTAGTTTTAGATATTAAATCACATAATTTGATGCCTTCCAACTACTTTAGCCGCTTTCATAAACTTTTTCTTGTAACGTTATCGCTTTGTTCCTTGAGTAGATACGTGTCTACGATTTTTATCGGTTGATATTCACTAGATATATTGAGTGTACGATTACAGAAGAAACAAAGTCGGCCTCGCTGACGTTCCGTGGGTGATGAGGCACGTCAGCCTGTAGACCAG
**************************************************.((((((.((.....((((((((.(((((......((((.......))))....)))))..)))..)))))...))))))))............((....))(((((((((((..(((.((.(((.....((((....)))).........((((..........)))).))))))))..)))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
.................................................................................................................................................................................CTACGTTTTTTATCAGATGATAT............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GGTGATGAGGCACGTCAGCCT......... 21 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................TCGGTTGATATTCACTAGATA................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................GTTCCGTGGGTGATGAGGCAC................. 21 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................ATTTTTGTCGGATGAGATTCA.......................................................................................... 21 3 3 0.67 2 2 0 0 0 0 0
......................................................................................................................................................................................................................................................CTCGCTGATGTTACGTG.............................. 17 2 17 0.12 2 0 1 0 1 0 0
..........................................................................................................................................................................................TTATCGGTTGATGTTC........................................................................................... 16 1 13 0.08 1 0 0 0 1 0 0
..........................................................................................................................................................................................................ACTAGATATATAGAG............................................................................ 15 1 16 0.06 1 0 0 0 0 1 0
................................................................................................................................................................................................................................................................TTCCGGGGGTGATGGGGAA.................. 19 3 20 0.05 1 0 0 0 0 0 1
..........................................................................................ATAATTTGATGCTTT............................................................................................................................................................................................ 15 1 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8689339-8689631 + dsi_26773 TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGA-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------TGG--------A------------AAGCTGATCAAAATCTATA---------------------------------------------------------------------------------------------------------------------------ATT-TAGTGTATTAAACTACGGAAGGTTGATGAAA-TCGGCGAAAGTA---TTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AGAACATTGCAATAGC--------GAAACAAGGA------ACTCATCTATGCACAGATGCTAAAAATAGCC------------AACTAT-----AAGTGATCTATATAACTCACATGCTAATG----TCTTCTTTGTT------------TCAGCCGGAGCGACTGCAAGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------
droSec2 scaffold_68:30940-31232 + TGATCGACTCGATGGCCAACTCC---TTCGTGGGCACCCGA-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------TGG-------GA------------TAGCTGATCAAAATCTATA---------------------------------------------------------------------------------------------------------------------------ACT-TAGTGTATTA-ACTACGGAAGGTTGATGAAA-TCGGCAAAAGTA---TTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AGAACATTGCAATAGC--------GAAACAAGGA------ACTCATCTATGCACAGATGTTAAAAATAGCC------------AACTAT-----AAGTGATCTATATAACTCACATGGTAATG----TCTTCTTTGTT------------TCAGCCGGAGCGACTGCAAGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------
dm3 chrX:9143165-9143457 + TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGT-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------TGG--------A------------TAGCTAATCAAAATCTATAC---------------------------------------------------------------------------------------------------------------------------TT-AGGTGTATTAAACAACGGAAGGTCGATGAAA-TCGGCGAAAGTA---TTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AGAACATTGCAATAGC--------AAAACAAGGC------ACTCATCTATGCACAGATGTTAAATATAGCC------------AACTAT-----AAGAGATCTATATAACTCACATGCTAATG----TCCTCTTTGTT------------TCAGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------
droEre2 scaffold_4690:5971963-5972247 - TAATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGT-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------CGG--------T------------TAGTCCA--------------------GCAA----------------------------------------------------------------------------------------------------------------TT-TAGTACAATAAACTTCTGAGGGTCGATGATA-TCGCCGACAGTA---TTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGTCAGGAAAAGCAGTGCAATAGC--------GAAACAAAGC------AATCATCTATACCTAGATGTTAAATATAGAC------------AATTAT-----AAGAGATCTATATAACTAAC-------------GACCCTTTGTT------------TCAGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------
droYak3 X:17739347-17739670 + TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGT-AGCTATATGTCGGTAAGTATC-----------------------------------------------------------------------TAA-------AA------------TA---GAACAAGATCTATACACGTCCAGCAA-------------------------------------------------------------------------------------------TATGAAGCTGTTGTTTAAGTTTT-GAGTGCATTAAACTGCTGAGGGTCGATGATA-TCGACGAAAGTA---TTTTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGTCAGGAAGAGCAGCGCAATAGC--------GAAACAAAGC------ACTCATCTACGCATAGATGTTAAATATAGCC------------AACTAT-----AAGAGATCTATATAACT--------AATG----AC-CCTTTGTT------------TCAGCCGGAGCGATTGCAGGGCACTCACTACTCCGTGCAGTCGGACATCTGGTC--------
droEug1 scf7180000409032:815734-816134 - TGATCGACTCGATGGCCAACTCC---TTCGTGGGCACCCGC-AGCTATATGTCGGTGAGTGATCT-----------------------------------------------------------------------T--------A------------TAGTTAAT--------------ATTTATTTATATAGTTCAAA--CTATAG-CGACTTTGATTTAGT-------------------------------------------------------------------------------------------------------------------------TTA---TCGGA--ACGAAAAGTTTTGTAAAAAATAAGTTTCTATATCATCCAATAAAGCGTAGAAAGAAGAAGAAATTAACAAATGTATGTAGAAATAGTGTTGGATGTAAGAGATAATGGGAGCACAACATTTAAAACGCATGATGGGCGGGAGTGGATTGCCAGATT---------------------------------------------------------ATATACGTAGATGTAAAACATTGCC------------AACTAT-----AAAACATTTGCATCACTCACTTGCTAATT----GCTCCTTTGTT------------TCAGCCGGAGCGACTGCAGGGCACTCACTACTCCGTGCAGTCGGACATCTGGTC--------
droBia1 scf7180000301760:5113953-5114312 + TGATCGACTCGATGGCCAATTCC---TTTGTGGGCACCCGC-AGCTATATGTCGGTAAGTGGTCGACA---------------------AGCTTA------------------TGAGAAGATATAAGGGGTTCCTAA-------AG------------TA---CAATGCGACCTATGC---------TA-------------------------------------------------------------------------------------------GAGGTAGTTATTGATCATGT------GTCAATAAAAC--ATGAGATTTTATGGGATTCGAGG-GAGAATCTTCTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGTCAGGGAATGGACTGCATGTGC----ATTAAGAACAAAGCACCCAG--TTGTATATACATGGATGTAAAACATATCA------------AACTAT-----AAGACATTTATATGACTTACTTGCTTATG----GCTCCTTTGTT------------TCAGCCGGAGCGACTGCAGGGCACTCACTACTCGGTACAGTCGGACATCTGGTC--------
droTak1 scf7180000415696:100376-100445 + TAATGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTGTT------------TCAGCCGGAGCGACTGCAGGGCACGCACTACTCGGTGCAGTCGGACATCTGGTC--------
droEle1 scf7180000491018:127592-127739 - AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------AAAAGATTGCAGAATG--------TACACAAAGA------TATAATATATGAGTAGA-----------------CATGTGGTAAACTACAAAACAAAATATTTGCA---CGCAC-------------TGCTCTTTGTT------------GTAGCCGGAGCGACTGCAGGGCACCCATTACTCGGTGCAGTCGGACATCTGGTC--------
droRho1 scf7180000779966:39051-39185 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATAAATGTAAAATATGGCCAGACATCTTGAAAACTAT-----AAAACATTTGCATCACTCACTTGCTAATG----GCTCCTTTGTT------------GCAGCCGGAGCGATTGCAAGGCACCCATTACTCGGTGCAGTCGGACATATGGTC--------
droFic1 scf7180000454073:2056493-2056887 + TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGC-AGCTATATGTCGGTAAGTTACCT----------------------------------------------------------------------GG-------GA------------CACCTGAT---ACTCT------ATCTATCTATCTAGTATAAGAAAGATAGGTAATTACGTTTCAGTTTGAAAAGCTAAATTAAAAGCAGAAGAAAGCGTGGGCCTTCTACTTAACCAGTAAATACTTCGCTG--GCTTGAGTTCCAGAGGAATTTTAAGTGGTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAGAAA------CACTATAGTTTTAAATGGAAGCAATGCACCAAG--ATTTGTAAAC--AA----AGAATATTGGTGCACATCTTGCAAGCCAT-----AAACTATTTGTAT----CACCGGCTAATG----TCTCCTTTGTTTTC---------GCAGCCGGAGCGACTGCAGGGCACCCATTACTCGGTGCAGTCAGACATCTGGTC--------
droKik1 scf7180000302696:1983483-1983538 + TGATAGACTCGATGGCCAACTCC---TTTGTGGGCACCCGC-AGCTACATGTCGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13047:1072916-1073137 - TGATAGACTCCATGGCTAACTCG---TTTGTGGGCACCCGC-AGCTACATGTCGGTGAGTGGGCTAAGGATCCGTATCCGGACTCCGTACTCTTAAGC----GATGCTTCAAT----------------------TGTATTGGGTAACCATAAGC-AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTACTC------------------------------CTTACTAATC----TTCCCT--ATTCTTCCCCATTATACAGCCGGAGCGACTGCAGGGCACTCACTACTCGGTACAGTCAGACATCTGGTC--------
droBip1 scf7180000396575:358311-358510 + TGATAGACTCCATGGCCAACTCG---TTTGTGGGCACCCGC-AGCTACATGTCGGTGAGTGGGCTAAGGATC-----------------CTCTAAAGCTAAAGATGGTTCAAT----------------------TGTATTGGGTAACCTTGGGC-AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGTACTG------------------------------ATTACTAATCTTGGA---T---ATTCTT---------CCAGCCGGAGCGACTGCAGGGCACTCACTACTCCGTGCAGTCGGACATCTGGTC--------
dp5 XL_group1a:7866629-7866688 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTT------------GCAGCCGGAACGTCTGCAGGGCACTCACTACTCAGTACAGTCGGACATTTGGTC--------
droPer2 scaffold_15:220788-220847 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTT------------GCAGCCGGAACGTCTGCAGGGCACTCACTACTCAGTACAGTCGGACATTTGGTC--------
droWil2 scf2_1100000004909:7828295-7828485 - TGATTGACTCGATGGCCAACTCC---TTCGTGGGCACACGC-AGTTACATGTCGGTAAGTTTGTC----------------------------------------------------------------------AG-------AATGACGAAGAAACTACTTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------TGCT------------AACAAC-----TTTATCTTTTCTTCTCTTTTCTATTTTAC----TTTCTCTTCGT------------TCAGCCGGAACGATTACAAGGTACTCACTATTCAGTACAGTCGGACATTTGGTC--------
droVir3 scaffold_12970:6458711-6458832 - GCTTAAATCCCAAAAATAAGT-------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------AATTAT--------A--TGTATGCATCCAGCATCCTAATGTT--GAAATGTTTTT------------GCAGCCGGAACGACTGCAGGGCACACACTACTCGGTACAGTCGGACATTTGGTC--------
droMoj3 scaffold_6473:1193000-1193172 - TAATCGATTCGATGGCCAACTCA---TTTGTGGGCACGCGC-AGCTATATGTCGGTAAGTAGAAT----------------------------------------------------------------------TG-------AAATAATAAGTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGTATTAAAC-ACAAATCTAAT-----------------------TG----T---T---ATCATT---------GCAGCCTGAGCGACTTCAGGGCACACACTATTCGGTTCAGTCGGACATTTGGTCCCTTGGCC
droGri2 scaffold_14853:956716-956971 + TGGTGGACTCCAAGGCGAATACACGTTCCGCTGGCTGT-GCAGCCTACATGGCGGTGAGTTTATTT-------------------------------------------------------------------------------A------------TA---------------------TTTAT-------------------------------------------------------------------------------------------------------------------TT-ACACACACAAAACAGTAAAAAATCAATAAAA-TAAAATCAAATA---TTGGA--ATTAAAATTATTTTAAAAAACCAAT----------------A--------------------------AAAT--ATATTTTAAAATTGTTAGTTAAACAAGACATTTAAAATTGAGTAT-----------------------------------------------------------------------------------------------------CTAATGCTAGAAATAGAG------------GACTTT-----GAAT----------------------------------------------------------------------------------TAGCATGCAATCCAAAATCTATTG--TAGTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGA-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------TGG--------A------------AAGCTGATCAAAATCTATA---------------------------------------------------------------------------------------------------------------------------ATT-TAGTGTATTAAACTACGGAAGGTTGATGAAA-TCGGCGAAAGTA---TTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AGAACATTGCAATAGC--------GAAACAAGGA------ACTCATCTATGCACAGATGCTAAAAATAGCC------------AACTAT-----AAGTGATCTATATAACTCACATGCTAATG----TCTTCTTTGTT------------TCAGCCGGAGCGACTGCAAGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCGACTGCAAGGCACCCACTACT..............................2711.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCACTACTCCGTGCAGTCGGAC................2411.00110000000000000000
...........ATGGCCAACTCC---TTTGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCGACTGCAAGGCACCCAC..................................2211.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCGACTGCAAGGCACC.....................................2011.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AAGTA---TTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AG..................................................................................................................................................................................................................15200.15300000000003000000
droSec2
TGATCGACTCGATGGCCAACTCC---TTCGTGGGCACCCGA-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------TGG-------GA------------TAGCTGATCAAAATCTATA---------------------------------------------------------------------------------------------------------------------------ACT-TAGTGTATTA-ACTACGGAAGGTTGATGAAA-TCGGCAAAAGTA---TTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AGAACATTGCAATAGC--------GAAACAAGGA------ACTCATCTATGCACAGATGTTAAAAATAGCC------------AACTAT-----AAGTGATCTATATAACTCACATGGTAATG----TCTTCTTTGTT------------TCAGCCGGAGCGACTGCAAGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAGCGACTGCAAGGCC.......................................1911.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGAGCGACTGCAAGGCACCCA...................................2411.0011000
dm3
TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGT-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------TGG--------A------------TAGCTAATCAAAATCTATAC---------------------------------------------------------------------------------------------------------------------------TT-AGGTGTATTAAACAACGGAAGGTCGATGAAA-TCGGCGAAAGTA---TTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------A----------AGAACATTGCAATAGC--------AAAACAAGGC------ACTCATCTATGCACAGATGTTAAATATAGCC------------AACTAT-----AAGAGATCTATATAACTCACATGCTAATG----TCCTCTTTGTT------------TCAGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................CC---TTTGTGGGCACCCGT-AGCTATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCTAATG----TCCTCTTTGTT------------TCA...........................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCGTGCAGTCGGACATCTGGTC--------2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCACCCGT-AGCTATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1541.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCGATTGCAGGGCACCCACTAC...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAGCGATTGCAGGGCACCCACT.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCCGTGCAGTCGGACATCTGG..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTACTCCGTGCAGTCGGACATC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTGGGCACCCGT-AGCTATATGTCGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................CC---TTTGTGGGCACCCGT-AGCTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCGGAGCGATTGCAGGG.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACAGATGTTAAATATAG...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................TTTGTGGGCACCCGT-AGCTATATGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCAATAGC--------AAAACAAGG...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCACTACTCCGTGCAGTCGGACATC.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTGTGGGCACCCGT-AGCTATATGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................AC-----------------------------------------------------------------------TGG--------A------------TAGCTAATCAAAATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGCAGGGCACCCACTAC...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGGAGCGATTGCAGGG.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGAGCGATTGCAGGGCACCCACTAC...............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACTACTCCGTGCAGTCGGACATCTGG..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCAGTCGGACATCTGG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCCGTGCAGTCGGACATCTGGT.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATG----TCCTCTTTGTT------------TCAGC.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGATTGCAGGGCACCCAC..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACTCC---TTTGTGGGCACCCGT-AGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CC---TTTGTGGGCACCCGT-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCAGTCGGACATCTGGTC--------2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACCCGT-AGCTATATGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGCACCCACTACTCCGT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------TCAGCCGGAGCGATTGCAGG..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATG----TCCTCTTTGTT------------TCATGG........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGT-AGCTATATGTCGGTAAGTAAC-----------------------------------------------------------------------CGG--------T------------TAGTCCA--------------------GCAA----------------------------------------------------------------------------------------------------------------TT-TAGTACAATAAACTTCTGAGGGTCGATGATA-TCGCCGACAGTA---TTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGTCAGGAAAAGCAGTGCAATAGC--------GAAACAAAGC------AATCATCTATACCTAGATGTTAAATATAGAC------------AATTAT-----AAGAGATCTATATAACTAAC-------------GACCCTTTGTT------------TCAGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCACTACTCCGTGCAGT.....................2011.0010100000
droYak3
TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGT-AGCTATATGTCGGTAAGTATC-----------------------------------------------------------------------TAA-------AA------------TA---GAACAAGATCTATACACGTCCAGCAA-------------------------------------------------------------------------------------------TATGAAGCTGTTGTTTAAGTTTT-GAGTGCATTAAACTGCTGAGGGTCGATGATA-TCGACGAAAGTA---TTTTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGTCAGGAAGAGCAGCGCAATAGC--------GAAACAAAGC------ACTCATCTACGCATAGATGTTAAATATAGCC------------AACTAT-----AAGAGATCTATATAACT--------AATG----AC-CCTTTGTT------------TCAGCCGGAGCGATTGCAGGGCACTCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TGATCGACTCGATGGCCAACTCC---TTCGTGGGCACCCGC-AGCTATATGTCGGTGAGTGATCT-----------------------------------------------------------------------T--------A------------TAGTTAAT--------------ATTTATTTATATAGTTCAAA--CTATAG-CGACTTTGATTTAGT-------------------------------------------------------------------------------------------------------------------------TTA---TCGGA--ACGAAAAGTTTTGTAAAAAATAAGTTTCTATATCATCCAATAAAGCGTAGAAAGAAGAAGAAATTAACAAATGTATGTAGAAATAGTGTTGGATGTAAGAGATAATGGGAGCACAACATTTAAAACGCATGATGGGCGGGAGTGGATTGCCAGATT---------------------------------------------------------ATATACGTAGATGTAAAACATTGCC------------AACTAT-----AAAACATTTGCATCACTCACTTGCTAATT----GCTCCTTTGTT------------TCAGCCGGAGCGACTGCAGGGCACTCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotal
No Reads
droBia1
TGATCGACTCGATGGCCAATTCC---TTTGTGGGCACCCGC-AGCTATATGTCGGTAAGTGGTCGACA---------------------AGCTTA------------------TGAGAAGATATAAGGGGTTCCTAA-------AG------------TA---CAATGCGACCTATGC---------TA-------------------------------------------------------------------------------------------GAGGTAGTTATTGATCATGT------GTCAATAAAAC--ATGAGATTTTATGGGATTCGAGG-GAGAATCTTCTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGTCAGGGAATGGACTGCATGTGC----ATTAAGAACAAAGCACCCAG--TTGTATATACATGGATGTAAAACATATCA------------AACTAT-----AAGACATTTATATGACTTACTTGCTTATG----GCTCCTTTGTT------------TCAGCCGGAGCGACTGCAGGGCACTCACTACTCGGTACAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotal
No Reads
droTak1
TAATGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTGTT------------TCAGCCGGAGCGACTGCAGGGCACGCACTACTCGGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotal
No Reads
droEle1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------AAAAGATTGCAGAATG--------TACACAAAGA------TATAATATATGAGTAGA-----------------CATGTGGTAAACTACAAAACAAAATATTTGCA---CGCAC-------------TGCTCTTTGTT------------GTAGCCGGAGCGACTGCAGGGCACCCATTACTCGGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATAAATGTAAAATATGGCCAGACATCTTGAAAACTAT-----AAAACATTTGCATCACTCACTTGCTAATG----GCTCCTTTGTT------------GCAGCCGGAGCGATTGCAAGGCACCCATTACTCGGTGCAGTCGGACATATGGTC--------SizeHit CountTotal NormTotal
No Reads
droFic1
TGATCGACTCGATGGCCAACTCC---TTTGTGGGCACCCGC-AGCTATATGTCGGTAAGTTACCT----------------------------------------------------------------------GG-------GA------------CACCTGAT---ACTCT------ATCTATCTATCTAGTATAAGAAAGATAGGTAATTACGTTTCAGTTTGAAAAGCTAAATTAAAAGCAGAAGAAAGCGTGGGCCTTCTACTTAACCAGTAAATACTTCGCTG--GCTTGAGTTCCAGAGGAATTTTAAGTGGTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAGAAA------CACTATAGTTTTAAATGGAAGCAATGCACCAAG--ATTTGTAAAC--AA----AGAATATTGGTGCACATCTTGCAAGCCAT-----AAACTATTTGTAT----CACCGGCTAATG----TCTCCTTTGTTTTC---------GCAGCCGGAGCGACTGCAGGGCACCCATTACTCGGTGCAGTCAGACATCTGGTC--------SizeHit CountTotal NormTotal
No Reads
droKik1
TGATAGACTCGATGGCCAACTCC---TTTGTGGGCACCCGC-AGCTACATGTCGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TGATAGACTCCATGGCTAACTCG---TTTGTGGGCACCCGC-AGCTACATGTCGGTGAGTGGGCTAAGGATCCGTATCCGGACTCCGTACTCTTAAGC----GATGCTTCAAT----------------------TGTATTGGGTAACCATAAGC-AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTACTC------------------------------CTTACTAATC----TTCCCT--ATTCTTCCCCATTATACAGCCGGAGCGACTGCAGGGCACTCACTACTCGGTACAGTCAGACATCTGGTC--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGAGCGACTGCAGGGCACTCA...................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCCCCATTATACAGCCG.......................................................2111.001100000
......................................CGC-AGCTACATGTCGGTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....GACTCCATGGCTAACTCG---TTTGTGGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTCGGTACAGTCAGACATCTGGT.........2611.001010000
droBip1
TGATAGACTCCATGGCCAACTCG---TTTGTGGGCACCCGC-AGCTACATGTCGGTGAGTGGGCTAAGGATC-----------------CTCTAAAGCTAAAGATGGTTCAAT----------------------TGTATTGGGTAACCTTGGGC-AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGTACTG------------------------------ATTACTAATCTTGGA---T---ATTCTT---------CCAGCCGGAGCGACTGCAGGGCACTCACTACTCCGTGCAGTCGGACATCTGGTC--------SizeHit CountTotal NormTotal
No Reads
dp5
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTT------------GCAGCCGGAACGTCTGCAGGGCACTCACTACTCAGTACAGTCGGACATTTGGTC--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTT------------GCAGCCGGAACGTCTGCAGGGCACTCACTACTCAGTACAGTCGGACATTTGGTC--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGATTGACTCGATGGCCAACTCC---TTCGTGGGCACACGC-AGTTACATGTCGGTAAGTTTGTC----------------------------------------------------------------------AG-------AATGACGAAGAAACTACTTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------TGCT------------AACAAC-----TTTATCTTTTCTTCTCTTTTCTATTTTAC----TTTCTCTTCGT------------TCAGCCGGAACGATTACAAGGTACTCACTATTCAGTACAGTCGGACATTTGGTC--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGTCGGACATTTGGT.........1911.00101000
.GATTGACTCGATGGCCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
droVir3
GCTTAAATCCCAAAAATAAGT-------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------AATTAT--------A--TGTATGCATCCAGCATCCTAATGTT--GAAATGTTTTT------------GCAGCCGGAACGACTGCAGGGCACACACTACTCGGTACAGTCGGACATTTGGTC--------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACACTACTCGGTACA.......................1911.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACACACTACTCGGTACAGTCGGAC................2711.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGGCACACACTACT..............................1911.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACTCGGTACAGTCGGAC................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TAATCGATTCGATGGCCAACTCA---TTTGTGGGCACGCGC-AGCTATATGTCGGTAAGTAGAAT----------------------------------------------------------------------TG-------AAATAATAAGTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGTATTAAAC-ACAAATCTAAT-----------------------TG----T---T---ATCATT---------GCAGCCTGAGCGACTTCAGGGCACACACTATTCGGTTCAGTCGGACATTTGGTCCCTTGGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCTAAT-----------------------TG----T---T---ATCATT---------GCAGT.........................................................2512.002000020
droGri2
TGGTGGACTCCAAGGCGAATACACGTTCCGCTGGCTGT-GCAGCCTACATGGCGGTGAGTTTATTT-------------------------------------------------------------------------------A------------TA---------------------TTTAT-------------------------------------------------------------------------------------------------------------------TT-ACACACACAAAACAGTAAAAAATCAATAAAA-TAAAATCAAATA---TTGGA--ATTAAAATTATTTTAAAAAACCAAT----------------A--------------------------AAAT--ATATTTTAAAATTGTTAGTTAAACAAGACATTTAAAATTGAGTAT-----------------------------------------------------------------------------------------------------CTAATGCTAGAAATAGAG------------GACTTT-----GAAT----------------------------------------------------------------------------------TAGCATGCAATCCAAAATCTATTG--TAGTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:10 PM