ID:

dsi_26764

 Coordinate:

3r:934977-935199 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -10.3 -10.1 -10.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTACATTGCCTCGTAGTATTCTGCCCTCTGGATCCATTGGTGTTTATATTTGGCAACGAAAAGTTCATGTTTGCCACATCTGCGTCAACTTTTTACTTTTTACTTTGCGCATCTGATTCCGCCTTCGTTTACGATGCTTTCATGGAAGTTGTAAACCCAGAATCTAATTTTATCAAAATGTATGCTTTATTGTTTACAGATAGTTCGTAGCCCCAACAAAACGAAGCCCAAACGACGTCACACTGGAGTCACAACACGATCTATTCTCCCAGAACTGAGACGAGACTTCCCCCCACCCCAAATACAACCTGTACAGTATGTC
***********************************************************************************************************************************************.........................((((......((((..(((((.((((((((.((....)))))).....))))...))))).......))))......))))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M053
female body
 O001
Testis
 SRR902008
ovaries
 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
...............................................................................................................................................TGGAAGTTGTAAACC..................................................................................................................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................TCTCCCAGAACTGAGACGAGACT................................... 23 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................ATGGAAGTTGTAAACC..................................................................................................................................................................... 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................TAAAGAACTGAGACGAGACTTCCCC.............................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................TCCCAGAACTGAGACGAGACTT.................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CATGGAAGTTGTAAACC..................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CATGGAAGTTGTAAACCG.................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CAACACGATCTATTCTCCCAGAA................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................CGAAGCCCAAACGACGTCACACTGGAG.......................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ACATGGAAGTTGTAAACC..................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................CACGATCTATTCTCCCAGAACTGAGA.......................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................ACGATCTATTCTCCCAGAACTGAGACGAG...................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................CTATTCTCCCAGAACTGAGACGAGACT................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................TCACACTGGAGTCACAACACGATC............................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................AGAACTGAGACGAGACTTCAA............................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AAACGACGTCACACTGGAGG......................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................ATGGAAGTTGTAAAC...................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GACGTCACACTGGAGTC........................................................................ 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CTCCCAGAACTGAGACGAGACTTCCCC.............................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................CAAAACGAAGCCCAAACC........................................................................................ 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................GAAGTAGTAAATCCAGAAGCT............................................................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
..........................................GTTTATGTTTGGCAACGGAC..................................................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................ATGGAAGTTGGAAAC...................................................................................................................................................................... 15 1 20 0.10 2 0 0 0 1 0 0 0 0 0 0 0 1
.............................................................................................................................................CATGGAAGTTGGAACCC..................................................................................................................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CATGGAAGTTGGAATCC..................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 1 0 0 0 0 0 0 0 1
.......................................................................................................................................................TTAAACCCAGAATCTA............................................................................................................................................................ 16 1 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CTCCGAGCACCGAGACGAG...................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................TTTGCTCATCTGATACC.......................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CATGGAAGTTGGAAA....................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCTTTATTGTTCAGAGA.......................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTTGCTCATCTGATACCGA........................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAATGTAACGGAGCATCATAAGACGGGAGACCTAGGTAACCACAAATATAAACCGTTGCTTTTCAAGTACAAACGGTGTAGACGCAGTTGAAAAATGAAAAATGAAACGCGTAGACTAAGGCGGAAGCAAATGCTACGAAAGTACCTTCAACATTTGGGTCTTAGATTAAAATAGTTTTACATACGAAATAACAAATGTCTATCAAGCATCGGGGTTGTTTTGCTTCGGGTTTGCTGCAGTGTGACCTCAGTGTTGTGCTAGATAAGAGGGTCTTGACTCTGCTCTGAAGGGGGGTGGGGTTTATGTTGGACATGTCATACAG
**************************************************************************.........................((((......((((..(((((.((((((((.((....)))))).....))))...))))).......))))......))))*********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR902009
testis
............................................................................TGTAGACGCAATAGCAAAATG.................................................................................................................................................................................................................................. 21 3 1 68.00 68 40 15 12 0 1 0 0 0
............................................................................TGTAGACGCAATAGCAAAAT................................................................................................................................................................................................................................... 20 3 2 3.00 6 2 3 1 0 0 0 0 0
.............................................................................GTAGACGCAATAGCAAAATG.................................................................................................................................................................................................................................. 20 3 4 1.50 6 3 2 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................ATAAGAGGGTCTTGACTCTG......................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................GTGTAGACGCAATAGCAAAATG.................................................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................CTTCGGGTTTGCTGCAGTGTG............................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........................CGTAGATCTAGGTAACCACAA...................................................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................TTTTGCTTCGGGTTT.......................................................................................... 15 0 2 0.50 1 0 0 0 1 0 0 0 0
..............................................................................TAGACGCAATTGCAAAATG.................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 1 0
...................................................................................................................................................................AGATTAAAAAAGTTT................................................................................................................................................. 15 1 20 0.45 9 0 0 0 0 0 9 0 0
.......................................................................................................................................................................................ACGCAATAGCAAATGTCT.......................................................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................GGGGGTGGGGTTTATG................. 16 0 3 0.33 1 0 0 0 1 0 0 0 0
............................................................................TGTAGACGCAATAGCAAAA.................................................................................................................................................................................................................................... 19 3 20 0.25 5 4 0 1 0 0 0 0 0
.................................................................................................................................................CTTCAAGATTTGGGT................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................GGCTTGACTCTGCTC...................................... 15 1 9 0.11 1 0 0 0 0 1 0 0 0
..........................................................................GGTGCAGACGGAGTTGAA....................................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 1 0 0 0 0 0
..............................................................................TAGACGCACTAGCAAAATG.................................................................................................................................................................................................................................. 19 3 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................AAGGGTGCAGACGGAGTTGA........................................................................................................................................................................................................................................ 20 3 16 0.06 1 0 0 1 0 0 0 0 0
..............................................................................TAGACGCAATTGCAAATTG.................................................................................................................................................................................................................................. 19 3 18 0.06 1 0 0 0 0 1 0 0 0
.....................................................................CAAAGGGTGCAGACGGAGT........................................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 1 0 0 0 0 0
................................................................................GGCGCAGTTGGAAAAT................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0
..........................................................................GGTGCAGACGGAGTTGAAC...................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTTTTTTGCGTCGGCTTTGCT....................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:934927-935249 - dsi_26764 TTT---------------ACATTGCCTCG----------------------------------------------------TAGTAT-TCTGCCC-TC--T-GGATCCATTGGTGTTTATATTT-GGCAACGAAAAGTT-CATGTTTGCCACATCTGCGTCAACTTTTTACTTTTTACTTTGCGCATCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AA-AATGTA-----T-GCTT-----TAT-TGTTTACAGATAGTTCGTAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------GCCCAAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTCTC-------------CCAGA-ACTGAGACGAGACT-------------TCC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCAAATACA--ACCTGTACAGTATGTC
droSec2 scaffold_6:1152006-1152328 - TTT---------------ACATTGTCTCG----------------------------------------------------TAGTAT-TGTGCCC-TC--T-GGATCCATTGGTGTTTATATTT-GGCAACGAAAAGTT-CATGTTTGCCACATCTGCGTCAACTTTTTACTTTTTACTTTGCGCATCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AT-AATGTA-----T-GCGT-----TAT-TGTTTACAGATAGTTCGTAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------GCCCAAACGACGTCACACTGGAGTCACA--ACACGATCT-GATCTC-------------CCAGA-ACTGAGACGAGACT-------------TCC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTC
dm3 chr3R:1029046-1029357 - TTT---------------ACATTGCCTCG----------------------------------------------------TAGTAT-TGTGCCC-TC--T-GTATCCATTGGTGTTTATATTT-GGCAACGAAAAGTT-CATGTTTGCCACATCTGCGCCAACTTTTTACTTTTTACTTTGCGCTTCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--TAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGTTCATAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAG---------GCCCAAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTCTT-------------CCAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--ACCTGTACAGTATGTC
droEre2 scaffold_4770:1305001-1305331 - TACTATATACTCTATATTATATTGCCTAA----------------------------------------------------TAGTAT-TCTACCC-TC--T-TGATCCATCAATGTTTATATTT-GGCAACGAAAAGTT-CATTTCTGCCACATCTGCGCCAAGTTCTTACTTTT-------CGCTTCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGCTCATAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------ACCTAAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTTTC-------------CCAGA-ACTGAGACGTGACT-------------T-C------------------------------------------------------------------------------------------------------------------CCGCAC------C--CCGATTACA--ACCTGTACAGTATGTC
droYak3 3R:1389254-1389564 - TTT---------------ACATTGTCTCT----------------------------------------------------TAGTAT-TGTGACC-CC--T-TGATGCATCGGTGTTTATATTT-GGCAACGAAAAGTT-AATGTTTGCCACATCTGCGTCTAGTTTTTACTTTT-------CGCTTCTGATTCCGTCT--TCGTTTACGATGCTT----TCATGGA--AGCTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGTTCATAG---CTC-T--------------------------A--------------------------------------------------------ACGAA---------ACCTTAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTTTC-------------CCGGA-ACTGAGACGTGACT-------------T-C------------------------------------------------------------------------------------------------------------------CCCCAC------C--TTGAATATA--ACCTGTACAGTATGTC
droEug1 scf7180000405655:374-680 + TTT---------------ACAATGTTTCC---------------------------------------------CTG----TAGTTT------------------TCCCTTTGTGTTTACGTTT-GGCAGCGAAACTTT-ACTGTTTGCCACATCTGCGCCAACTTTTTACTCTT-------GGCTTCAGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAAA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGT-CGGGG---CCCCC---------AG-----------C-AAA--------------------------------------------------------ACGAA---------ACACAAACGACGTCACACTGGAGTCACA--ACACGATCG-ATTCTC-------------CCAGA-ACTGAGACGAGACA-------------TTC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTC
droBia1 scf7180000302411:769995-770319 - TTT---------------ACAATTTCTTC---------------------------------------------CTGTATGTAGTTTTTCTGCCCCTC--C-TGACCAACGAGTGTTTACATTT-GGCATCAAAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTT-------CGCTTCTGATTCTGCCT--TCGTTTACGATGCTTT---TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGT-CAGTG---CC--C---------AA-----------C-AAG--------------------------------------------------------GCGAA---------ACACAAACTACGTCACACTGGAGTCACA--ACACGATCA-ACATTC-------------CCAGA-ACTGAGACGAGACC-------------TTC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTC
droTak1 scf7180000415789:758512-758877 - TTT---------------CTATTTCCTCATCACATTTGTAAGTGAACAAACGTATTTATATTTACATTTTCACCCCG----TTGTTTCTCTGCTTCCC--T-TGATAAATTAGTGTTTACATTT-GGCATCAAAAATTT-AATGTTTGCAACATCTGCGCAAAGTTTTTACTTTT-------CGCTTCTGATTCCGCCT--TCGTTTACGATGCTTT---TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----CAT-TGTTTACAGATAGT-CGAAG---CC--C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------ACATAAACTACGTCACACTGGAGTCACA--ACACGATCA-AGTTTC-------------CCAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTC
droEle1 scf7180000491104:2847361-2847669 - TTT---------------AA------TAT----------------------------------------------------AAGTTTGGCTGCCCTTC--T-TGATCCATTGGTGTTTACATTT-GGCAACGGAAATTT-AATGTTCGCCACATCTGCGCCAACTTTTTACTTTT-------CGCTTCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--TAAATTGTA-----T-GCTT---------TGTTTACAGATAGT-CAGAG---CCCAC---------AA-----------C-CAA--------------------------------------------------------ACGAA---------ATAAAAACGACGTCACACTGGAGTCACA--ACACGATTA-ATATTT-------------CCAGA-ACTGAGACGAGACT-------------TT-------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACC--ACCTGTACAGTATGTC
droRho1 scf7180000779573:4974-5283 + TTT---------------AA------TAG----------------------------------------------------TAGTTTTCCT-CCCTTT--T-TGATCCATCGGTGTTTACATTT-GGCAACGAAAATTT-AATGATCGCCACATCTGCACCAACTTTTTAGTTTT-------CGTTTCTAATTCCGCCT--ACGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----C-GCTT-----TGT-TGTTTACAGACAGT-CAAAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------ACATAAACGACGTCGCACTGGAGTCACA--ACACGACCA-ATTTTT-------------CCAGA-ACTGAGACGAGAAT-------------TT-------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATAAA--ACCTGTACAGTATGTC
droFic1 scf7180000453850:395947-396276 - TATATTAT----------ACAATGTCTGG---------------------------------------------CTATA--TATT-TTCCTGCCCATC--T-TGACCCATCGCTGTTTACATTT-GGCAACGGAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTT-------CATTGGTGATTCCGCCT--TCGTTTATGACGCTT----TCGTGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGCA-----T-GCTT-----GAT-TGTTTACAGAGAGT-CAGAG---CCC-C-----------------CAGAAC-AGA--------------------------------------------------------ACGAT---------AGATAAACGACGTCACACTGGAGTCACA--ACACGAACA-ATTTTC-------------CCAGA-ACTGAGACGAGACT-------------GTC------------------------------------------------------------------------------------------------------------------CCCCTC------C--CCGATTACA--ACCTGTACAGTATGTC
droKik1 scf7180000302634:728021-728359 - TTT---------------ACAATGTCTTC---------------------------------------------CTTTA--TATT-T-TCTGCCCCTCAACATAATTCGTCGGTGTTTACATTT-GGCAACGGAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTCTT-------CGCTTCTGATTCCGCCTCTCTATTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AA-ATTTTC-CTTCT-GC---------C-TCTTTACAGATAGT-CAAAG---CCTCCTCCTCCGTACA-----------C-AAA--------------------------------------------------------ACGAAG--------ACAAAAACGACGTCACACTGGAGTCACA--ACACGGTAA-ACGGTC-------------CCAGA-ACTAAAAAGCGACG--------ACCCTT-C------------------------------------------------------------------------------------------------------------------CCTT-T------C--CCCAATACA--ACCTGTACAGTATGTC
droAna3 scaffold_13340:23223761-23224069 - TCC---------------AC------------------------------------------------------------------------------------ATCCATCAGTGTTTACATTT-GGCAACGGAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTT-------CGCCTCTGATTCCGCTT--CTATTTACGATCCCT----TCATGGA--AGTTGTAAACCTAGA-----GTCTAATTTTAT-C--AA-ATTCTA-----TTCCAT-----TAT-TGTTTACAGATAGC-CCGAGGAGACTCT------------------------AAA--------------------------------------------------------GCGGAGAATTACAAACA-TTACAACGTCACACTGGAGTCACA--ATACAATAA-ATAC----------AATTTCCAAA-GCTAAGAAGACACCAAACGTTG-----TCC------------------------------------------------------------------------------------------------------------------CCTTTC------C--CCGACTTCA--ACCTGTACAGTATGTC
droBip1 scf7180000396395:225976-226280 - TTT---------------ACAT------------------------------------------------------------AGTCTTCCCGCCCCCCA-C-ACATCCATCAGTGTTTACATTT-GGCAACGGAAACTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTTT------CGCCTCCGATTCCGT-----------------TT----CCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AA-ATTGTG-----TTCCTT-----TAT-TGTTTACAGATAGC-CGGAG---ACTCT---------AA-----------CCAAA--------------------------------------------------------ATTAG-------AAAC---AATAACGTCACACTGGAGTCACA--ATACGATACAAGAC----------ACCT-CCAAA-GCTAAGA-GACACC-------GTCCCTT-C------------------------------------------------------------------------------------------------------------------CTTTCT------T--CCGACTTCA--ACCTGTACAGTATGTC
dp5 2:21759626-21759941 + TC---------------------------------------------------------------------------------------------------------CCTTTTTGTTTACATTTTCCCAATGGAAATTCAAATGTTTGCAACATCTGCGGCAAGTTTTTCCATTT-------CCCT-----------AT--CTGTTTACGGTGCTTTTTTCGCTGGAATAGTTGTAAACCTACAAAAAGATCTAAATTTAT-C--CG-AATGTA-----T-GGTT-----TAT-TGTTTACAGATAGA-CGTCGG----------------AGAGCTGCC--------------------------------------------------------------------AC---------A---AAACGGAGTCACACTGGAGTCACA--ATACAGTAA-ACTCTCCCAAAGACACTTCACAGAGACTAGGAGGAGCGT------AG-----TCC--------------------------------------------------------------------TCCTCCTGTAAACCCAGCC-------------------------C-CCCCCC----CTT--CAGAGCAGT--CTCTGTACAGTATGTC
droPer2 scaffold_3:4543884-4544189 + T-----------------------------------------------------------------------------------------------------------------GTTTACATTTTCCCAATGGAAATTCAAATGTTTGCAACATCTGCGGCAAGTTTTTCCATTT-------CCCTT-----------T--CTGTTTACGGTGCTTTTTTCGCTGGAATAGTTGTAAACCTACAAAAAGATCTAAATTTAT-C--CG-AATGTA-----T-GGTT-----TAT-TGTTTACAGATAGA-CGTCGG----------------AGAGCTGCC--------------------------------------------------------------------AC---------A---AAACGGAGTCACACTGGAGTCACA--ATACAGTAA-ACTCTCCCAAAGACAC---ACAGACACTAGGAGGAGCGT------AG-----TCC--------------------------------------------------------------------TCCTCCTGTAAACCCAGCCG------------------------CCCCCCCC------T--TCGAA-ACAGTCTCTGTACAGTATGTC
droWil2 scf2_1100000004943:12900297-12900587 + T-----------------------------------------------------------------------------------------------------------------GTTTACATTT-CGCATT-----------TGTATG-TACAGATGTGCCAACTTTGTACTTTT-------T---------------T--TATTTTATGATT-TT----TCCTGGA--AGTTGTAAACCTAAA-----ATCTAATTATAT-CCAAAAAATTTA-----T-GCTT-----TAT-TGTTTACAGTTAGC-CTAT---------------------------------ACAA----AGAAATATACACA------CACACACACACACACACACACACAGAGAAGCGGCAAT---------ATATAAACGACGTCACACTGGAGTCACAAAATACCATAA-ACATTCCGAA----------AAGA-ACTACAAGTTAAAT--------ATCCAT-C------------------------------------------------------------------------------------------------------------------CC-TTCCCCAATTCCC---------------CGCAGTATGTC
droVir3 scaffold_12855:7870681-7870955 + TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATGCC-----TCGTGGA--AGTTGTAAACCTAGA-----AACTAATTTTAATT--TCATATGTC-----T-GCTTGTT--TTT-TTTTTCCAGTTAGC-CGGAGG----------------AA-----------C-ACA--------------------------------------------------------GCAAC---------AAACAAACGACGTCACACTGGAGTCACA-AATACGATAA-ACATTC-------------CAAAA-ATTC-CATATTACC-------------TCTTTCCTTCTATCTCGCTCGCTCTCTCTCTCGCTCTCTCTCTCTCTCT--CTCTCTCTCTCTCTCTCTCT--------------------CTCTGTTTACCAACCAAAACTTTC--T------------------GTCCC--GCTCGCTCGGTATGTC
droMoj3 scaffold_6540:23100311-23100569 + TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATGCC-----TCGCGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAA-C--CCAATTTTT-----C-GTTTGTTCTCCT-ATTTTACAGTTAGC-TGACGG----------------AA-----------C-ACT--------------------------------------------------------GGAAC---------AGATAAACGACGTCACACTGGAGTCACA-AATACGATAA-ACATTC-------------C-ACA-AATTCCACATTACC-------------TCCCTTCAACTCTTTCATTC----TCTCTCTCTGTCTGTCCGACTCTCTCCATCTCGCGCTCTCTCTCTCG--------------------CGCTGT------------ACTCCC--C------------------GCC-----CTCTCTCGGCATGTC
droGri2 scaffold_15074:4447226-4447549 + TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATTGCT----TCATGGA--AGTTGTAAACCTAGA-----ATCTAATTTTAA-C--CCAATTCTCCCTTTT-GCTCATG--TTTGTGTTTACAGTTAGC-CGAAG---CTG-C-----------------CAGAAG-ACAACAACAGTAACAAAAACAACAACAACAGCAAAGAAACGGAATCAGAAGAAGAAGAAGGAGC---------TGAGAAACGACGTCACACTGGAGTCACA-AATACGATAA-ACATTC-------------CAAAA-ATTC-CA--TTACC-------------TCT------------------------CTCTCTCTCTCTCCGTCTATCT--CTTTCACACTCTCTCCCCCAATCTGCTACCACCCCACCCACCCTGC----------------TC--TGCCCC------G--CCGA---------TTTGACAGCATGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTT---------------ACATTGCCTCG----------------------------------------------------TAGTAT-TCTGCCC-TC--T-GGATCCATTGGTGTTTATATTT-GGCAACGAAAAGTT-CATGTTTGCCACATCTGCGTCAACTTTTTACTTTTTACTTTGCGCATCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AA-AATGTA-----T-GCTT-----TAT-TGTTTACAGATAGTTCGTAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------GCCCAAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTCTC-------------CCAGA-ACTGAGACGAGACT-------------TCC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCAAATACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................TGGA--AGTTGTAAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1512.00200000002000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-------------CCAGA-ACTGAGACGAGACT-------------...............................................................................................................................................................2312.00200000011000000000
..............................................................................................................................................................................................................................ATGGA--AGTTGTAAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000002000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------------CCAGA-ACTGAGACGAGACT-------------T..............................................................................................................................................................2211.00100000000000001000
.............................................................................................................................................................................................................................CATGGA--AGTTGTAAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000001000000000
.............................................................................................................................................................................................................................CATGGA--AGTTGTAAACCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--ACACGATCT-ATTCTC-------------CCAGA-A.........................................................................................................................................................................................2311.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGAA---------GCCCAAACGACGTCACACTGGAG....................................................................................................................................................................................................................................2711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGATCT-ATTCTC-------------CCAGA-ACTGAGA...................................................................................................................................................................................2611.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCT-ATTCTC-------------CCAGA-ACTGAGACGAG...............................................................................................................................................................................2911.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-ATTCTC-------------CCAGA-ACTGAGACGAGACT-------------...............................................................................................................................................................2711.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACACTGGAGTCACA--ACACGATC.....................................................................................................................................................................................................................2411.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA-ACTGAGACGAGACT-------------TCA------------------------------------------------------------------------------------------------------------------A.........................................2111.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGG...................................................................................................................................................................................................................................2011.00101000000000000000
..............................................................................................................................................................................................................................ATGGA--AGTTGTAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCACACTGGAGTC..................................................................................................................................................................................................................................1711.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-------------CCAGA-ACTGAGACGAGACT-------------TCC------------------------------------------------------------------------------------------------------------------CC........................................2711.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................C-AAA--------------------------------------------------------ACGAA---------GCCCAAACC..................................................................................................................................................................................................................................................1850.20100100000000000000
droSec2
TTT---------------ACATTGTCTCG----------------------------------------------------TAGTAT-TGTGCCC-TC--T-GGATCCATTGGTGTTTATATTT-GGCAACGAAAAGTT-CATGTTTGCCACATCTGCGTCAACTTTTTACTTTTTACTTTGCGCATCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AT-AATGTA-----T-GCGT-----TAT-TGTTTACAGATAGTTCGTAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------GCCCAAACGACGTCACACTGGAGTCACA--ACACGATCT-GATCTC-------------CCAGA-ACTGAGACGAGACT-------------TCC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--ACACGATCT-GATCTC-------------CCA.............................................................................................................................................................................................2011.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................CGAA---------GCCCAAACGACGTCACACT........................................................................................................................................................................................................................................2311.0010010
dm3
TTT---------------ACATTGCCTCG----------------------------------------------------TAGTAT-TGTGCCC-TC--T-GTATCCATTGGTGTTTATATTT-GGCAACGAAAAGTT-CATGTTTGCCACATCTGCGCCAACTTTTTACTTTTTACTTTGCGCTTCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--TAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGTTCATAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAG---------GCCCAAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTCTT-------------CCAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT-------------CCAGA-ACTGAGACGAGAC.............................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTT-------------CCAGA-ACTGAGACGAGA..............................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCT-ATTCTT-------------CCAGA-ACTGAGACGA................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGA.....................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTGGAGTCACA--ACACG........................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCACACTGGAGTCAC................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAA--------------------------------------------------------ACGAG---------GCCCAAACGACGT..............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAA--------------------------------------------------------ACGAG---------GCCCAAACGACGTCAC...........................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-ATTCTT-------------CCAGA-ACTGA.....................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................G---------GCCCAAACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCT-ATTCTT-------------CCAGA-ACTGAGA...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--T...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................A-----ATCTAATTTTAT-C--TAAAATGTA-----T-GCTT-----............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCT-ATTCTT-------------CCAGA-ACTGAGACGAGAC.............................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................TAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAG---------GCCCAAACGAC................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--ACCTGTACAGTA....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AG---------GCCCAAACGACGTCACACTGGAGTCA.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTCTT-------------CCAGA-ACTGAGACGAGACT-------------TT.............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------C...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAACGACGTCACACTGGAGTCAC................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--ACCTGTAC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGGAGTCACA--ACACGATCT-ATTCT..............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TCCATTGGTGTTTATATTT-GGCAACGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAACGACGTCACACTG.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTCAC................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGATCT-ATTCTT-------------CCAGA-ACTGAG....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCACACTGGAGTCACA--A............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAGTCACA--ACACGAT......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTCACA--AC...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--ACCTG...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAA--------------------------------------------------------ACGAG---------GCCCAAACGACGTC.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGGAGTCACA--ACACGATC.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-------------CCAGA-ACTGAGACGAGACT-------------T..............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCACACTGGAGTCA.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TACTTTTTACTTTGCGCTTCTGATTCCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCACACTGGAGTCACA--ACA..........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTCACACTGGAGTCACA--ACA..........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AG---------GCCCAAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCT-ATTCTT-------------CCAGA-ACTGAGAC..................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GTTGTAAACCCAGA-----ATCTAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCT-ATTCTT-------------CCAGA-ACTGAGACGAGA..............................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGACGTCACACTGGAGTCA.................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TCGTTTACGATGCTT----TCATGGA--AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAG---------GCC........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................C-C---------AA-----------C-AAA--------------------------------------------------------ACGAG---------GCCCAAACGACGTCA............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACACTGGAGTCACA--ACACGATC.....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TACGATGCTT----TCATGGA--AGTTGTAAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCT-ATTCTT-------------CCAGA-ACTG......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TTAT-C--TAAAATGTA-----T-GCTT-----TAT-TGTT....................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--ACACGATCT-ATTCTT-------------CC..............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................TTGCGCTTCTGATTCCGCCT--TCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACACTGGAGTCACA--ACACGATCT-AT.................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACA--ACACGATCT-ATTCTT-------------CCAGA-AC........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTCTT-------------CCAGA-ACTGAGACGAGACT-------------T..............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-------------CCAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTT-------------CCAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------C...................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAG---------GCCCAAACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-ATTCTT-------------CCAGA-ACTGAGAC..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTCACA--ACACGA.......................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGGAGTCACA--ACACGAT......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTCACA--.............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAACGACGTCACACTGGAGTCAC................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................AGTTCATAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAG---------GCCCA......................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CC--------------------CA--ACC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------ACGAG---------GCCCAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTTTACTTTTTACTTTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TACTATATACTCTATATTATATTGCCTAA----------------------------------------------------TAGTAT-TCTACCC-TC--T-TGATCCATCAATGTTTATATTT-GGCAACGAAAAGTT-CATTTCTGCCACATCTGCGCCAAGTTCTTACTTTT-------CGCTTCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGCTCATAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------ACCTAAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTTTC-------------CCAGA-ACTGAGACGTGACT-------------T-C------------------------------------------------------------------------------------------------------------------CCGCAC------C--CCGATTACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................AAA--------------------------------------------------------ACGAA---------ACCTAAACGACGTCACACT........................................................................................................................................................................................................................................2711.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACT-------------T-C------------------------------------------------------------------------------------------------------------------CCGCAC------C--CCGATTACA--ACCTG...........2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2011.0010000010
...........................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------------------ACGAA---------ACCTAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2911.0010100000
droYak3
TTT---------------ACATTGTCTCT----------------------------------------------------TAGTAT-TGTGACC-CC--T-TGATGCATCGGTGTTTATATTT-GGCAACGAAAAGTT-AATGTTTGCCACATCTGCGTCTAGTTTTTACTTTT-------CGCTTCTGATTCCGTCT--TCGTTTACGATGCTT----TCATGGA--AGCTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGTTCATAG---CTC-T--------------------------A--------------------------------------------------------ACGAA---------ACCTTAACGACGTCACACTGGAGTCACA--ACACGATCT-ATTTTC-------------CCGGA-ACTGAGACGTGACT-------------T-C------------------------------------------------------------------------------------------------------------------CCCCAC------C--TTGAATATA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................ATAGTTCATAG---CTC-T--------------------------A--------------------------------------------------------ACGA.....................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................C-T--------------------------A--------------------------------------------------------ACGAA---------ACCTTAACGACGTCACACT........................................................................................................................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGACGTGACT-------------T-C------------------------------------------------------------------------------------------------------------------CCCCAC------C--TTGAA......................2711.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCACACTGGAG....................................................................................................................................................................................................................................1811.00100001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAA---------ACCTTAACGACGTCACACTGGG.....................................................................................................................................................................................................................................2511.00110000000000
....................................................................................................................................................................................................................................................................................................................TCATAG---CTC-T--------------------------A--------------------------------------------------------ACGAA---------ACCTTAAC...................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTCACACTGGAGTC..................................................................................................................................................................................................................................1811.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................A---------ACCTTAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2511.00100000100000
droEug1
TTT---------------ACAATGTTTCC---------------------------------------------CTG----TAGTTT------------------TCCCTTTGTGTTTACGTTT-GGCAGCGAAACTTT-ACTGTTTGCCACATCTGCGCCAACTTTTTACTCTT-------GGCTTCAGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAAA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGT-CGGGG---CCCCC---------AG-----------C-AAA--------------------------------------------------------ACGAA---------ACACAAACGACGTCACACTGGAGTCACA--ACACGATCG-ATTCTC-------------CCAGA-ACTGAGACGAGACA-------------TTC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droBia1
TTT---------------ACAATTTCTTC---------------------------------------------CTGTATGTAGTTTTTCTGCCCCTC--C-TGACCAACGAGTGTTTACATTT-GGCATCAAAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTT-------CGCTTCTGATTCTGCCT--TCGTTTACGATGCTTT---TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----TAT-TGTTTACAGATAGT-CAGTG---CC--C---------AA-----------C-AAG--------------------------------------------------------GCGAA---------ACACAAACTACGTCACACTGGAGTCACA--ACACGATCA-ACATTC-------------CCAGA-ACTGAGACGAGACC-------------TTC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droTak1
TTT---------------CTATTTCCTCATCACATTTGTAAGTGAACAAACGTATTTATATTTACATTTTCACCCCG----TTGTTTCTCTGCTTCCC--T-TGATAAATTAGTGTTTACATTT-GGCATCAAAAATTT-AATGTTTGCAACATCTGCGCAAAGTTTTTACTTTT-------CGCTTCTGATTCCGCCT--TCGTTTACGATGCTTT---TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----T-GCTT-----CAT-TGTTTACAGATAGT-CGAAG---CC--C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------ACATAAACTACGTCACACTGGAGTCACA--ACACGATCA-AGTTTC-------------CCAGA-ACTGAGACGAGACT-------------TTC------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droEle1
TTT---------------AA------TAT----------------------------------------------------AAGTTTGGCTGCCCTTC--T-TGATCCATTGGTGTTTACATTT-GGCAACGGAAATTT-AATGTTCGCCACATCTGCGCCAACTTTTTACTTTT-------CGCTTCTGATTCCGCCT--TCGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--TAAATTGTA-----T-GCTT---------TGTTTACAGATAGT-CAGAG---CCCAC---------AA-----------C-CAA--------------------------------------------------------ACGAA---------ATAAAAACGACGTCACACTGGAGTCACA--ACACGATTA-ATATTT-------------CCAGA-ACTGAGACGAGACT-------------TT-------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATACC--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droRho1
TTT---------------AA------TAG----------------------------------------------------TAGTTTTCCT-CCCTTT--T-TGATCCATCGGTGTTTACATTT-GGCAACGAAAATTT-AATGATCGCCACATCTGCACCAACTTTTTAGTTTT-------CGTTTCTAATTCCGCCT--ACGTTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGTA-----C-GCTT-----TGT-TGTTTACAGACAGT-CAAAG---CCC-C---------AA-----------C-AAA--------------------------------------------------------ACGAA---------ACATAAACGACGTCGCACTGGAGTCACA--ACACGACCA-ATTTTT-------------CCAGA-ACTGAGACGAGAAT-------------TT-------------------------------------------------------------------------------------------------------------------CCCCAC------C--CCGAATAAA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droFic1
TATATTAT----------ACAATGTCTGG---------------------------------------------CTATA--TATT-TTCCTGCCCATC--T-TGACCCATCGCTGTTTACATTT-GGCAACGGAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTT-------CATTGGTGATTCCGCCT--TCGTTTATGACGCTT----TCGTGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AAAAATGCA-----T-GCTT-----GAT-TGTTTACAGAGAGT-CAGAG---CCC-C-----------------CAGAAC-AGA--------------------------------------------------------ACGAT---------AGATAAACGACGTCACACTGGAGTCACA--ACACGAACA-ATTTTC-------------CCAGA-ACTGAGACGAGACT-------------GTC------------------------------------------------------------------------------------------------------------------CCCCTC------C--CCGATTACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droKik1
TTT---------------ACAATGTCTTC---------------------------------------------CTTTA--TATT-T-TCTGCCCCTCAACATAATTCGTCGGTGTTTACATTT-GGCAACGGAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTCTT-------CGCTTCTGATTCCGCCTCTCTATTTACGATGCTT----TCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AA-ATTTTC-CTTCT-GC---------C-TCTTTACAGATAGT-CAAAG---CCTCCTCCTCCGTACA-----------C-AAA--------------------------------------------------------ACGAAG--------ACAAAAACGACGTCACACTGGAGTCACA--ACACGGTAA-ACGGTC-------------CCAGA-ACTAAAAAGCGACG--------ACCCTT-C------------------------------------------------------------------------------------------------------------------CCTT-T------C--CCCAATACA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
droAna3
TCC---------------AC------------------------------------------------------------------------------------ATCCATCAGTGTTTACATTT-GGCAACGGAAATTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTT-------CGCCTCTGATTCCGCTT--CTATTTACGATCCCT----TCATGGA--AGTTGTAAACCTAGA-----GTCTAATTTTAT-C--AA-ATTCTA-----TTCCAT-----TAT-TGTTTACAGATAGC-CCGAGGAGACTCT------------------------AAA--------------------------------------------------------GCGGAGAATTACAAACA-TTACAACGTCACACTGGAGTCACA--ATACAATAA-ATAC----------AATTTCCAAA-GCTAAGAAGACACCAAACGTTG-----TCC------------------------------------------------------------------------------------------------------------------CCTTTC------C--CCGACTTCA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................T------------------------AAA--------------------------------------------------------GCGGAGAATTACAAACA-TTAC...................................................................................................................................................................................................................................................2511.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-TTACAACGTCACACTGGAGTCACA--.............................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAAACA-TTACAACGTCACACTGGA.....................................................................................................................................................................................................................................2511.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTG-----TCC------------------------------------------------------------------------------------------------------------------CCTTTC------C--CC.........................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAACGTTG-----TCC------------------------------------------------------------------------------------------------------------------CCTTTC------C--C..........................2311.001010000
droBip1
TTT---------------ACAT------------------------------------------------------------AGTCTTCCCGCCCCCCA-C-ACATCCATCAGTGTTTACATTT-GGCAACGGAAACTT-AATGTTTGCCACATCTGCGCCAACTTTTTACTTTTT------CGCCTCCGATTCCGT-----------------TT----CCATGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAT-C--AA-ATTGTG-----TTCCTT-----TAT-TGTTTACAGATAGC-CGGAG---ACTCT---------AA-----------CCAAA--------------------------------------------------------ATTAG-------AAAC---AATAACGTCACACTGGAGTCACA--ATACGATACAAGAC----------ACCT-CCAAA-GCTAAGA-GACACC-------GTCCCTT-C------------------------------------------------------------------------------------------------------------------CTTTCT------T--CCGACTTCA--ACCTGTACAGTATGTCSizeHit CountTotal NormTotal
No Reads
dp5
TC---------------------------------------------------------------------------------------------------------CCTTTTTGTTTACATTTTCCCAATGGAAATTCAAATGTTTGCAACATCTGCGGCAAGTTTTTCCATTT-------CCCT-----------AT--CTGTTTACGGTGCTTTTTTCGCTGGAATAGTTGTAAACCTACAAAAAGATCTAAATTTAT-C--CG-AATGTA-----T-GGTT-----TAT-TGTTTACAGATAGA-CGTCGG----------------AGAGCTGCC--------------------------------------------------------------------AC---------A---AAACGGAGTCACACTGGAGTCACA--ATACAGTAA-ACTCTCCCAAAGACACTTCACAGAGACTAGGAGGAGCGT------AG-----TCC--------------------------------------------------------------------TCCTCCTGTAAACCCAGCC-------------------------C-CCCCCC----CTT--CAGAGCAGT--CTCTGTACAGTATGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-ACTCTCCCAAAGACACT..................................................................................................................................................................................................2011.0010010000000
...............................................................................................................................................................................................................................................................................................................ATAGA-CGTCGG----------------AGAGCTGCC--------------------------------------------------------------------AC---------...........................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCAAAGACACTTCACAGA...........................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGAGTCACACTGGAGTCA.................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGAGACTAGGAGG.................................................................................................................................................................................1811.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGACTAGGAGGAGC..............................................................................................................................................................................1911.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTCACA--ATACAGTAA-ACT................................................................................................................................................................................................................2311.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCACAGAGACTAGGA...................................................................................................................................................................................1811.0010000100000
droPer2
T-----------------------------------------------------------------------------------------------------------------GTTTACATTTTCCCAATGGAAATTCAAATGTTTGCAACATCTGCGGCAAGTTTTTCCATTT-------CCCTT-----------T--CTGTTTACGGTGCTTTTTTCGCTGGAATAGTTGTAAACCTACAAAAAGATCTAAATTTAT-C--CG-AATGTA-----T-GGTT-----TAT-TGTTTACAGATAGA-CGTCGG----------------AGAGCTGCC--------------------------------------------------------------------AC---------A---AAACGGAGTCACACTGGAGTCACA--ATACAGTAA-ACTCTCCCAAAGACAC---ACAGACACTAGGAGGAGCGT------AG-----TCC--------------------------------------------------------------------TCCTCCTGTAAACCCAGCCG------------------------CCCCCCCC------T--TCGAA-ACAGTCTCTGTACAGTATGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................ATAGA-CGTCGG----------------AGAGCTGCC--------------------------------------------------------------------AC---------A---.......................................................................................................................................................................................................................................................2313.003300000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGT------AG-----TCC--------------------------------------------------------------------TCCTCCTGT...............................................................................1811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAC---ACAGACACTAGGAGGA................................................................................................................................................................................2011.001010000
droWil2
T-----------------------------------------------------------------------------------------------------------------GTTTACATTT-CGCATT-----------TGTATG-TACAGATGTGCCAACTTTGTACTTTT-------T---------------T--TATTTTATGATT-TT----TCCTGGA--AGTTGTAAACCTAAA-----ATCTAATTATAT-CCAAAAAATTTA-----T-GCTT-----TAT-TGTTTACAGTTAGC-CTAT---------------------------------ACAA----AGAAATATACACA------CACACACACACACACACACACACAGAGAAGCGGCAAT---------ATATAAACGACGTCACACTGGAGTCACAAAATACCATAA-ACATTCCGAA----------AAGA-ACTACAAGTTAAAT--------ATCCAT-C------------------------------------------------------------------------------------------------------------------CC-TTCCCCAATTCCC---------------CGCAGTATGTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTC..................................................................................................................................................................................................................................2113.00330000
........................................................................................................................................................................................................................................................................................................................................................................................................................AT---------ATATAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2412.00200200
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGACGTCACACTGGG.....................................................................................................................................................................................................................................1912.00220000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAT---------ATATAAACGACGTCACACTGGAGT...................................................................................................................................................................................................................................2711.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTCCCCAATTCCC---------------CGCAGTATGTC2511.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGA.....................................................................................................................................................................................................................................1811.00110000
........................................................................................................................................................................................................................................................................................................................T---------------------------------ACAA----AGAAATATACACA------CACACACAC................................................................................................................................................................................................................................................................................................2711.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................ACACACACACACACAGAGAAGCGGC.......................................................................................................................................................................................................................................................................2511.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2011.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................T---------ATATAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2311.00110000
droVir3
TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATGCC-----TCGTGGA--AGTTGTAAACCTAGA-----AACTAATTTTAATT--TCATATGTC-----T-GCTTGTT--TTT-TTTTTCCAGTTAGC-CGGAGG----------------AA-----------C-ACA--------------------------------------------------------GCAAC---------AAACAAACGACGTCACACTGGAGTCACA-AATACGATAA-ACATTC-------------CAAAA-ATTC-CATATTACC-------------TCTTTCCTTCTATCTCGCTCGCTCTCTCTCTCGCTCTCTCTCTCTCTCT--CTCTCTCTCTCTCTCTCTCT--------------------CTCTGTTTACCAACCAAAACTTTC--T------------------GTCCC--GCTCGCTCGGTATGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC--T------------------GTCCC--GCTCGCTCGG......2013.003000000000000000000000000000000000000000000000000000000000000003
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC--T------------------GTCCC--GCTCGCTCGGTA....2212.002000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTC--T------------------GTCCC--GCTCGCTC........2112.002000000000000000000000000000000000000000000000000000000000000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCTATCTCGCTCGCTCTCT....................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACGTCACACTGGAGTCACA-AA............................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACC-------------TCTTTCCTTCTATCTCGCTCGCT........................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC--T------------------GTCCC--GCTCGCTCGGT.....2111.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................GTTAGC-CGGAGG----------------AA-----------C-ACA--------------------------------------------------------GCAAC---------...........................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-CATATTACC-------------TCTTTCCT.......................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--CTCTCTCTCTCTCTCTCTC.........................................................................................21200.153000000000000000000000000000000210000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCGCTCTCTCTCTCTCTCT--............................................................................................................24200.102000000000000000002000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCGCTCTCTCTCTCTCT................................................................................................................22200.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATGCC-----TCGCGGA--AGTTGTAAACCCAGA-----ATCTAATTTTAA-C--CCAATTTTT-----C-GTTTGTTCTCCT-ATTTTACAGTTAGC-TGACGG----------------AA-----------C-ACT--------------------------------------------------------GGAAC---------AGATAAACGACGTCACACTGGAGTCACA-AATACGATAA-ACATTC-------------C-ACA-AATTCCACATTACC-------------TCCCTTCAACTCTTTCATTC----TCTCTCTCTGTCTGTCCGACTCTCTCCATCTCGCGCTCTCTCTCTCG--------------------CGCTGT------------ACTCCC--C------------------GCC-----CTCTCTCGGCATGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCGCTCTCTCTCTCG--------------------CGCTGT------------..................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGAAC---------AGATAAACGACGTCACACTGGA.....................................................................................................................................................................................................................................2711.001100000
droGri2
TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATTGCT----TCATGGA--AGTTGTAAACCTAGA-----ATCTAATTTTAA-C--CCAATTCTCCCTTTT-GCTCATG--TTTGTGTTTACAGTTAGC-CGAAG---CTG-C-----------------CAGAAG-ACAACAACAGTAACAAAAACAACAACAACAGCAAAGAAACGGAATCAGAAGAAGAAGAAGGAGC---------TGAGAAACGACGTCACACTGGAGTCACA-AATACGATAA-ACATTC-------------CAAAA-ATTC-CA--TTACC-------------TCT------------------------CTCTCTCTCTCTCCGTCTATCT--CTTTCACACTCTCTCCCCCAATCTGCTACCACCCCACCCACCCTGC----------------TC--TGCCCC------G--CCGA---------TTTGACAGCATGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................ACAACAGTAACAAAAACAACA............................................................................................................................................................................................................................................................................................................2150.20110
............................................................................................................................................................................................................................................................................................................................................................AACAACAGTAACAAAAACA...............................................................................................................................................................................................................................................................................................................1970.14110

Generated: 05/19/2015 at 05:40 AM