ID:dsi_2673 |
Coordinate:2r:5850166-5850233 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5849976_5850165_-]; CDS [2r_5849976_5850165_-]; CDS [2r_5850234_5850370_-]; exon [2r_5850234_5850370_-]; intron [2r_5850166_5850233_-]
No Repeatable elements found
| ##################################################--------------------------------------------------------------------################################################## ACCTGGTGCCCATGATTGGCGCACTCATCGGTTTCCTTGTTCTGCGAAAGGTGAGATTTTTAAATGGCGCCCACCGTGGGGCATACGATATGCTTTTGAGGTTATCCTTTCGTTATAGGTCTTTCGCCTGTCGGTGGTGACCCTAGCACTACTGGCCTTCTTTTCGGA **************************************************........((..(((((.....(((..((((((((...))))))))...))).......)))))..))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................CTTTCGACTGTCGGTGGTGAC........................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................TTCTGCGGAAGGTGAGCTCTTTAAA........................................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........ATGATTGGCGCACTTATCGGT........................................................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| .................................................................................................................................GTCGGTGGTGACCCTAGCACT.................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................................................................GGCCTGTAGGTGGTGAC........................... | 17 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 |
|
TGGACCACGGGTACTAACCGCGTGAGTAGCCAAAGGAACAAGACGCTTTCCACTCTAAAAATTTACCGCGGGTGGCACCCCGTATGCTATACGAAAACTCCAATAGGAAAGCAATATCCAGAAAGCGGACAGCCACCACTGGGATCGTGATGACCGGAAGAAAAGCCT
**************************************************........((..(((((.....(((..((((((((...))))))))...))).......)))))..))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
M024 male body |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
M023 head |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................AAGCGATAGCCAGAGAGCGGACA..................................... | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................ACCGCGGGTGGCACCCC....................................................................................... | 17 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................CAAGCGATAGCCAGAAAGCGG........................................ | 21 | 3 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................ACCGCGGCTGGCACCCC....................................................................................... | 17 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................ACCGCGGGTGGCACCCCGC..................................................................................... | 19 | 1 | 10 | 0.20 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
| ................................................................ACCGCGGGTGGTACCC........................................................................................ | 16 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................CCGCGGGTGTCACCCC....................................................................................... | 16 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ................................................................ACTGCGGGTGGCACC......................................................................................... | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................CGCGGGTGGCACCCCGGCT................................................................................... | 19 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .....................................................................................................................................CAGGACTCGGATCGTGAT................. | 18 | 3 | 17 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ................................................................ACCGCGGCAGGCACCCCTT..................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 01:21 AM