ID:

dsi_2670

Coordinate:

x:3104972-3105043 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCATTCAGCTTCAATGGAACCAGATCAGGAGATATACAGCCAGCCGGGTAGTAGAATCAGGCCAGCAGAAGGTTATCAAGCGGCAATGCAACACGCCCTTGTCCTTGATATTCATGATTCAGATCATACGGAGACGCGTGGCAGCGGCGGATCGAATCCCTTTCCGCAGGAC
**************************************************...((..((..............(((((((.(((((.((.....))..))))))))))))....))..))..**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
O001
Testis
M024
male body
SRR1275487
Male larvae
SRR618934
dsim w501 ovaries
M023
head
SRR902008
ovaries
SRR553486
Makindu_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
............................................CGGGTAGTAGAAGCAGGCCAG........................................................................................................... 21 1 1 56.00 56 56 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCA............................................................................................................ 20 1 1 29.00 29 29 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAGATCATGCGGAGACG.................................... 20 1 1 13.00 13 13 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAGTT......................................................................................................... 23 3 1 9.00 9 9 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCC............................................................................................................. 19 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAT........................................................................................................... 21 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGAC..................................... 21 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAGATCATGCGGAGAC..................................... 19 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAGT.......................................................................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.................................................................................................................ATGATTCAGATCATGCGGAG....................................... 20 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAGATCATGCGGAGAA..................................... 19 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...............................................GTAGTAGAAGCAGGCCAGCAG........................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCAGATCATGCGGAGACG.................................... 19 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
......................................................................GGTTATCAAGCGGCAATGTA.................................................................................. 20 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............AATGGAACCAGATCAGGAGAT........................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
................................................TAGTAGAAGCAGGCCAGCAGA....................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGA...................................... 20 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................CCAGCCGGGTAGTAGAAGCATA............................................................................................................... 22 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................CAGCCGGGTAGTAGAAGCAGGC.............................................................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCATT.......................................................................................................... 22 3 2 3.00 6 6 0 0 0 0 0 0 0 0 0
.........TTCAATGGAACCAGATCAGGAG............................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGTGGCAGCGGCGGATCGAATT.............. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................AGTAGAATCAGGCCAGCAGAA...................................................................................................... 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
...............................................GTAGTAGAAGCAGGCCAGCAGT....................................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................ACGCGTGGCAGCGGCGGATCGTT................ 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................CAGCCGGGTAGTAGAAGCAGGT.............................................................................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............AATGGAACCAGATCAGGAGA............................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAGC.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........TCAATGGAACCAGATCAGGAG............................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................CCGGGTAGTAGAAGCAGGCCT............................................................................................................ 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCT............................................................................................................ 20 2 2 2.00 4 4 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAG....................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAGTA......................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCTT........................................................................................................... 21 3 4 1.50 6 6 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCT............................................................................................................. 19 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0
................................................TAGTAGAAGCAGGCCAGCATT....................................................................................................... 21 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0
....................................................................................AATGCAACACGCCCTTGTCCTTG................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGCAGCGGCGGATCGAATTT............. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................ATGATTCAGATCATGCGGATAA..................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................AGTAGAAGCAGGCCAGCAGAATT.................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGTGGCAGCGGCGGATCGAA................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................CCGGGTAGTAGAAGCAGGCCA............................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAA........................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................TATTGCCAGCCGGGTAGTAGA..................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCTAT........................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CAGCGGCGGATCGAATCCCTTT......... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................ACCAGAGAAGGAGATATACA...................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................GTAGTAGAATCAGGCCAGCA......................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................CAACACGCCCTTGTCCTTGA................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................GGTAGTAGAAGCAGGCCAG........................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................TAGTAGAAGCAGGCCAGCAG........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................TGCAACACGCCCTTGTCCTTG................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................CAGGAGATATACAGCCAGCC............................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........CAATGGAACCAGATCAGGAG............................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................AGCCGGGTAGTAGAAGCAGGCT............................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................TAGTAGAAGCAGGCCAGCAGAT...................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................AGTAGAAGCAGGCCAGCAGAA...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................CAGCCGGGTAGTAGAAGCAGGA.............................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................CAGGATAGCAGAAGCTTATCA.............................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................GGCAGCGGCGGATCGAATCCCT........... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAGCT......................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................ATATTGCCAGCCGGGTAGTAG...................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGTGGCAGCGGCGGATCGAAT............... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................GTAGTAGAAGCAGGCCAGCA......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGACGT................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGAA..................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TCCTTGATATTCATGATTC.................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................CGCGTGGCAGCGGCGGATCGA................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................GGAGACGCGTGGCAGCGGCGG...................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................GCCGGGTAGTAGAAGCAGGCC............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................CCAGCCGGGTAGTAGAAGCAGG............................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................ATGATTCAGATCATGCGGAGA...................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TCAGATCATGCGGAGACGTTT................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................GAAGGTTATCAAGCGGCAATG.................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAGATCATGCGGAGACA.................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................GCCGGGTAGTAGAAGCAGGCCT............................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..ATTCAGCTTCAATGGAACCAG..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAGATCATGCGGAGACT.................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGCCAGA.......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................GCCGGGTAGTAGAAGCAGG............................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGTCCA............................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............TGGAACCAGATCAGGAGAT........................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................TAGTAGAATCAGGCCAGCA......................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............ATGGAACCAGATCAGGAGAT........................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................CATGATTCAGATCATACGGA........................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................TACAGCCAGCCGGGTAGTAG...................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAGATCATGCGGAGACGC................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................TAGTAGAATCAGGCCAGCAGAA...................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................AGATATACAGCCAGCCGG............................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................AGCCGGGTAGTAGAAGCAGG............................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTTAGATCATGCGGAGACG.................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................GATTCAGATCATGCGGAGACG.................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGACG.................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................CAGCCGGGTAGTAGAAGCAT................................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCAGATCATGCGGAGACGCG.................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTAGAAGCAGGCCAGCAGAA...................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................AAGGTTATCAAGCGGCAA...................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................TATACAGCCAGCCGGGTAG......................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................AGCGGCAATGCAACACGCCCTTG....................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................GCGGCAATGCAACACGCCCTTT....................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................CCAGCCGGGTAGTAGAAGCAT................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............ATGGAACCAGATCAGGAGATAA......................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................GAGATATATTGCCAGCCGGG............................................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................CAGCCGGGTAGTAGAAGCAGGCC............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................CCGGGTAGTAGAAGCAGGCC............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TCAGATCATGCGGAGACGTT.................................. 20 3 5 0.80 4 4 0 0 0 0 0 0 0 0 0
............................................CGGGAAGTAGAAGCAGGCCAG........................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................CGGAGACGCGTGGCAGCGGCTTT..................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGTAGTAGAAGCAGGC.............................................................................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGTT..................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..........................................GTCGGGTAGTAGAATCAGC............................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0
.............................AGATATATTGCCAGCCGGGTT.......................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
............................GAGATATATTGCCAGCCGG............................................................................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................................AGAAGGTTATCAAGCGGTT....................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................CCGGGTAGTAGAAGCAGGTT............................................................................................................. 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................................................TAGTAGTATCAGGTGAGCAG........................................................................................................ 20 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.................................................AGTAGAAGCAGGCCAGCAGATT..................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
............................................CGGGAAGTAGAAGCAGGCCAT........................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.................................................AGTAGAAGCAGGCCAGCAGTT...................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATTCAGATCATGCGGAGTA..................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................................................GGTTATCGAGCGGCAATGAC.................................................................................. 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.........................................AGCCGGGTAGTAGAAGCAGTT.............................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AGCGGCGGGTAGAATCCTT........... 19 3 10 0.20 2 0 0 0 0 0 0 0 2 0 0
....................................................................................................................ATTCAGATCATGCGGAGAAT.................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................AGTAGAAGCAGGCCAGCATT....................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AGCGGCGGGTAGAATCCT............ 18 3 20 0.10 2 0 0 0 0 0 0 0 1 0 1
....................................................................................................................ATTCAGATCATGCGGAGAAA.................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0
...................................ACAGCCAGCCGGGAA.......................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 1 0 0
..............TGGGACCAAATCAGGAG............................................................................................................................................. 17 2 17 0.06 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CGTAAGTCGAAGTTACCTTGGTCTAGTCCTCTATATGTCGGTCGGCCCATCATCTTAGTCCGGTCGTCTTCCAATAGTTCGCCGTTACGTTGTGCGGGAACAGGAACTATAAGTACTAAGTCTAGTATGCCTCTGCGCACCGTCGCCGCCTAGCTTAGGGAAAGGCGTCCTG
**************************************************...((..((..............(((((((.(((((.((.....))..))))))))))))....))..))..**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
O001
Testis
M024
male body
SRR553485
Chicharo_3 day-old ovaries
SRR618934
dsim w501 ovaries
SRR553486
Makindu_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
.........................................................................................TTGTGCGGGAACAGGAACTAT.............................................................. 21 0 1 47.00 47 47 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTAT.............................................................. 19 0 1 35.00 35 35 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTATA............................................................. 20 0 1 30.00 30 30 0 0 0 0 0 0 0
.....................................................................................TACGTTGTGCGGGAACAGGAA.................................................................. 21 0 1 29.00 29 29 0 0 0 0 0 0 0
........................................................................................TTTGTGCGGGAACAGGAACTAT.............................................................. 22 1 1 21.00 21 21 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTATAA............................................................ 21 0 1 20.00 20 20 0 0 0 0 0 0 0
..........................................................................................TTTGCGGGAACAGGAACTATA............................................................. 21 1 1 19.00 19 19 0 0 0 0 0 0 0
...........................................................................................TTGCGGGAACAGGAACTATA............................................................. 20 1 1 19.00 19 19 0 0 0 0 0 0 0
............................................................................................TGCGGGAACAGGAACTATAAG........................................................... 21 0 1 12.00 12 12 0 0 0 0 0 0 0
...AAGTCGAAGTTACCTTGGTCT.................................................................................................................................................... 21 0 1 11.00 11 11 0 0 0 0 0 0 0
.............................................................................................GCGGGAACAGGAACTATAAGT.......................................................... 21 0 1 10.00 10 10 0 0 0 0 0 0 0
..........................................................................................TTTGCGGGAACAGGAACTAT.............................................................. 20 1 1 10.00 10 10 0 0 0 0 0 0 0
............................................................................................TGCGGGAACAGGAACTATAA............................................................ 20 0 1 9.00 9 9 0 0 0 0 0 0 0
........................................................................................GTTGTGCGGGAACAGGAACTA............................................................... 21 0 1 8.00 8 8 0 0 0 0 0 0 0
...........................................................................................TTGCGGGAACAGGAACTAT.............................................................. 19 1 1 8.00 8 8 0 0 0 0 0 0 0
............................................................................................TGCGGGAACAGGAACTATAAGT.......................................................... 22 0 1 8.00 8 8 0 0 0 0 0 0 0
........................................................................................TTTGTGCGGGAACAGGAACTA............................................................... 21 1 1 8.00 8 8 0 0 0 0 0 0 0
.......................................................................................TTTTGTGCGGGAACAGGAA.................................................................. 19 2 1 7.00 7 7 0 0 0 0 0 0 0
..........................................................................................TGTGCGGGAACAGGAACTATA............................................................. 21 0 1 7.00 7 7 0 0 0 0 0 0 0
.........................................................................................TTGTGCGGGAACAGGAACTA............................................................... 20 0 1 6.00 6 6 0 0 0 0 0 0 0
.....................................................................................AACGTTGTGCGGGAACAGGAA.................................................................. 21 1 1 6.00 6 6 0 0 0 0 0 0 0
..........................................................................................TGTGCGGGAACAGGAACTAT.............................................................. 20 0 1 6.00 6 6 0 0 0 0 0 0 0
.........................................................................................TTGTGCGGGAACAGGAACTATA............................................................. 22 0 1 6.00 6 6 0 0 0 0 0 0 0
........................................................................................GTTGTGCGGGAACAGGAA.................................................................. 18 0 1 5.00 5 5 0 0 0 0 0 0 0
.......................................................................................CGTTGTGCGGGAACAGGAACT................................................................ 21 0 1 5.00 5 5 0 0 0 0 0 0 0
.........................................................................................TTTTGCGGGAACAGGAACTATA............................................................. 22 1 1 5.00 5 5 0 0 0 0 0 0 0
......................................................................................ACGTTGTGCGGGAACAGGAA.................................................................. 20 0 1 5.00 5 5 0 0 0 0 0 0 0
...........................................................................................ATGCGGGAACAGGAACTAT.............................................................. 19 1 1 4.00 4 4 0 0 0 0 0 0 0
........................................................................................GTTGTGCGGGAACAGGAACT................................................................ 20 0 1 4.00 4 4 0 0 0 0 0 0 0
........................................................................................ATTGTGCGGGAACAGGAACTA............................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0
............................................................................................TGCGGGAACAGGAACTATA............................................................. 19 0 1 4.00 4 4 0 0 0 0 0 0 0
....AGTCGAAGTTACCTTGGTCT.................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0
...............................................................................................GGGAACAGGAACTATAAGTAC........................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................GTTACGTTGTGCGGGAACAG..................................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0
...............................................................................................GGGAACAGGAACTATAAGTA......................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0
........................................................................................TTTGTGCGGGAACAGGAACT................................................................ 20 1 1 3.00 3 3 0 0 0 0 0 0 0
................................................................................................TGAACAGGAACTATAAGTACTA...................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0
............................................GCCCATCATCTTCGTCCGGT............................................................................................................ 20 1 1 3.00 3 3 0 0 0 0 0 0 0
..................................................................................................AACAGGAACTATAAGTACTA...................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0
......................................................................................AATTTGTGCGGGAACAGGAA.................................................................. 20 2 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................GTCCGGTCGTCTTCCAATAGT.............................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................TTACGTTGTGCGGGAACAGGAA.................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................................CTATAAGTACTAAGTCTAGTA............................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................TTTGCGGGAACAGGAACTATAAGT.......................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0
........................................................................................TATGTGCGGGAACAGGAACTA............................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................TTGTGCGGGAACAGGAACT................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0
...........................................................................................AAGCGGGAACAGGAACTATAAGT.......................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................TGTGCGGGAACAGGAACTATAA............................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................ATTGCGGGAACAGGAACTATA............................................................. 21 2 1 2.00 2 2 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTATAAG........................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................................CGTTACGTTGTGCGGGAAC....................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................TTATGCGGGAACAGGAACTATAAGT.......................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................................................................................CTCTGCGCACCGTCGCCGCCTA.................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0
.........................................................................................TTTTGCGGGAACAGGAACTAT.............................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................................................AACAGGAACTATAAGTACTAA..................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.........AAGTTACCTTGGTCTAGT................................................................................................................................................. 18 0 1 2.00 2 0 2 0 0 0 0 0 0
..............................................................................................CGGGAACAGGAACTATAAGTA......................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................TTTAGTGCGGGAACAGGAACTATA............................................................. 24 3 1 2.00 2 2 0 0 0 0 0 0 0
........................................................................................TTTGTGCGGGAACAGGAAC................................................................. 19 1 1 2.00 2 2 0 0 0 0 0 0 0
...........................................GGCCCATCATCTTCGTCCGGT............................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................TTTTGTGCGGGAACAGGAAC................................................................. 20 2 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................TTTTGTGCGGGAACAGGAACT................................................................ 21 2 1 2.00 2 2 0 0 0 0 0 0 0
...........................................................................................TTGCGGGAACAGGAACTATAAG........................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0
........................................................................................ATTGTGCGGGAACAGGAACTAT.............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................CATGCGGGAACAGGAACTATA............................................................. 21 2 1 2.00 2 2 0 0 0 0 0 0 0
........................................................................................ATTGTGCGGGAACAGGAACTATA............................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................TTTACGTTGTGCGGGAACAGGAA.................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
.............TACCTTGGTCTAGTCCTCTA........................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................ATGCGGGAACAGGAACTATAAG........................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................TTTTGTGCGGGAACAGGAACTAT.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................AATTCCAATAGTTCGCCGTTACG................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................TGTCGGCCCATCATCTTCGT................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................ATTTTGTGCGGGAACAGGAACTA............................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................GGCGGGAACAGGAACTATAAGT.......................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................TTGCCGCCTAGCTTAGGGAAAG........ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...........GTTACCTTGGTCTAGTCCTC............................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................TTGTGCGGGAACAGGAACTATAA............................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................TTTTTTGTGCGGGAACAGGAACTA............................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0
..........................TCCTCTATATAACGGTCGGCC............................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................TATGCGGGAACAGGAACTAT.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................TGTCCGGTCGTCTTCCAATA................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................GTACTAAGTCTAGTATGCCTC....................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................AGTACTAAGTCTAGTATGCCT........................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................CTTCCAATAGTTCGCCGTTACG................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTATAAGT.......................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................ATCATCTTCGTCCGGTCGTCT....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................AACTAAGTCTAGTACGCCTCT...................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................TTGCGGGAACAGGAACTATAA............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................ACTAAGTCTAGTATGCCT........................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................ATGCGGGAACAGGAACTATA............................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................AGTGCGGGAACAGGAACTAT.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................TTGCTTAGGGAAAGGCGTCCT. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
CGTAAGTCGAAGTTACCTTG........................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTATAAGTACT....................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................TATGCGGGAACAGGAACTATA............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................TTAGTGCGGGAACAGGAACTAT.............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................TTGTTGTGCGGGAACAGGAA.................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................TAGTCCGGTCGTCTTCCAA.................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................TTTGCGGGAACAGGAACTATAA............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
................................ATATAACGGTCGGCCCATCAT....................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................AGTGCGGGAACAGGAACTATAA............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAATT................................................................ 17 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................AGTGCGGGAACAGGAACTATA............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................................TTGGCCCATCATCTTCGTCCGGT............................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................ATTGCGGGAACAGGAACTATAAG........................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................CCGCCTAGCTTAGGGAAA......... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................GTTGTGCGGGAACAGGAAC................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................CATCATCTTAGTCCGGTCGTCT....................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................CGCCGTTACGTTGTGCGGGAACAG..................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................CTATATGTCGGTCGGCCCATC......................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................GTTGTGCGGGAACAGGAACTG............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TGCGGGAACAGGAACTATAAGTA......................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................ATCCTCTATATAACGGTCGGCCC............................................................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................CCAATAGTTCGCCGTTACG................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...........GTTACCTTGGTCTAGTCCTCT............................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
............................CTCTATATAACGGTCGGCCC............................................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0
...................................TAACGGTCGGCCCATCATCTT.................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................ATGTGCGGGAACAGGAACTAT.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................ATAACGGTCGGCCCATCATC...................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................TTTTTGCGGGAACAGGAACT................................................................ 20 2 3 1.00 3 3 0 0 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACTA............................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................GTCCGGTCGTCTTCCAATAG............................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................GCGCACCGTCGCCGCCTAG................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................TTTGTGCGGGAACAGGAACTATA............................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................ATGTGCGGGAACAGGAACTATA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................ACGTTGTGCGGGAACAGGAAC................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................GTCTTCCAATAGTTCGCCGT....................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................GCGGGAACAGGAACTATAAG........................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................ATAACGGTCGGCCCATCATCT..................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................CAGGAACTATAAGTACTAAGT................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................ACAGGAACTATAAGTACTAA..................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................TTTTCGGGAACAGGAACTATA............................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.............TACCTTGGTCTAGTCCTCT............................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................TTGTCCGGTCGTCTTCCAAT................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................TATCATCTTCGTCCGGTCGTCT....................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.............TACCTTGGTCTAGTCCTCTAT.......................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................ATTTGTGCGGGAACAGGAA.................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................ATTTGCGGGAACAGGAACTAT.............................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................GTTACGTTGTGCGGGAACA...................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................TTTTTGCGGGAACAGGAACTATAA............................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................CCTTGTGCGGGAACAGGAACT................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................ATTAGCTTAGGGAAAGGCGTC... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................AACGTTGCGCGGGAACAGGAA.................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................TTTTGTGCGGGAACAGGAACTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
........................................................TGTCCGGTCGTCTTCCAATAG............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................TTGCGGGAACAGGAACTATAAGT.......................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................TATAACGGTCGGCCCATCAT....................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TGCGGGAACAGGAACTAT.............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................TTGGAACAGGAACTATAAGTA......................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
................ATTGGTCTAGTCCTCTATATA....................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................CATCTTAGTCCGGTCGTC........................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................GCGGGAACAGGAACTATA............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................CGTTGTGCGGGAACAGGAA.................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................ATTTGTGCGGGAACAGGAACTATAA............................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................ATCGGGAACAGGAACTATAAGT.......................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.....GTCGAAGTTACCTTGGTCTA................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0
...........................................................................................GTGCGGGAACAGGAACAATA............................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................CTGCGGGAACAGGAACTATAA............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................TTGCGGGAACAGGAACTACA............................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................GTCGGTCGGCCCATCATCTTA................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................GTCCTCTATATAACGGTCGGC.............................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................TTTACGTTGTGTGGGAACAGGAA.................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
......................................AGGTCGGCCCATCATCTTCGTC................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................TTTAGCGGGAACAGGAACTA............................................................... 20 2 3 0.67 2 2 0 0 0 0 0 0 0
...................................................................................................ACAGGAACTGTAAGTA......................................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0
.....................................................................................AATTTTGTGCGGGAACAGGAA.................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................AACGGGAACAGGAACTATAAG........................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................TTTTTGCGGGAACAGGAACTAT.............................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0 0
....................................AACGGTCGGCCCATCATCTT.................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0
...................................TTACGGTCGGCCCATCATC...................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................AATAAGTCTAGTACGCCTCT...................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................TTTTTGTGCGGGAACAGGAACT................................................................ 22 3 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................TTACCGTCGCCGCCTAGCTT................ 20 2 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................ATTTTGCGGGAACAGGAA.................................................................. 18 2 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................................................................................................ACCGTCGCCCCCTAGTTT................ 18 2 9 0.11 1 0 0 0 0 0 1 0 0
......................................................................................TTTTTGTGCGGGAACAGGAA.................................................................. 20 3 10 0.10 1 1 0 0 0 0 0 0 0
...ATGTCGAAATTACCTTAGTC..................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 1 0 0 0
........................AGTCCTCCATAAGTCCGTC................................................................................................................................. 19 3 15 0.07 1 0 0 0 0 0 0 1 0
......................................................................................AAAATGTGCGGGAACAGGAA.................................................................. 20 3 17 0.06 1 1 0 0 0 0 0 0 0
..............................................................................................................................ATGCCTTTGCGCGCCG.............................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0
....................................................................TTCCACTAGGTCGCCGT....................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1
......................................................................................TTTTTGTGCGGGAACAGGA................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:3104922-3105093 - dsi_2670 GCA-----TT--CAGCTTCA--ATGGAACCA---GATCAGGAGATATACAGCCAGCCGGGTAGT---------AGAATCAGGCCAGCAGAAGGT------TATCAAGCGGCAATGCAACACGCCCTTGTCCTTGATATTCATGATTCAGATCATACGG------AGACGCGTGGCAGCGGCGGATCGAATCCCTTTCCGCAGGAC---
droSec2 scaffold_4:3304535-3304706 + GCA-----TT--CAGCTTCA--ATGGAACCA---GATCAGGAGATATACTGCCAGCCGGGTAGT---------AGAATCAGGCCAGTAGAGGGT------TATCAAGCGGCAATGCAACACGCCCTTGTCCTTGATATTCATGATTCAGATCATACGG------AGACGCGTGGCAGCGGCGGATCGAATCCCTTTCCGCAGGAC---
dm3 chrX:3357811-3357972 - GTT-----TT--TAGCTTCA--ATGGATTCA---AATCAGGAGATATACTTTCAGCCGCGTTGTATGTCAGGTACAAATAGATCAGTAGTAG-------------------------AAAAATTCTTGTCTTTGATATTCATAATTTAGATCATATGG------AGATGCGTGGCAGCGGCGGATCGAATCCCTTATCGCAACAC---
droEre2 scaffold_4690:766933-767084 - GTT-----TT---GGCTTTGAGATGCAATCA---GATCTGGAGGTGTACAACCAGCCAGGTGCT-GGTCAAGTA-----------------GAT------TCGCCGGCGGAACGGCAATACGCCCATGACCCTGACATCCATGGTTCAAATCATGCGC------AGAGACGTGGCAGCGGCGGATCGAATCCC---------------
droYak3 X:5023246-5023405 + GAT-----TT--GGGTTTTG--ATGGAATCC---GATCTGAGGGTGTACTACCAGCCGGCTG----GCCAAGT-----------------GGGT------TCCCAGGCTGAACTGCAATGTGCCCTGGACCTTGATATTCATAATTCAGATCATACGG------AGACGCGTGGCAGTGGCGGTTCTAATCCTTTTCCGCAGGAC---
droEug1 scf7180000409178:136120-136168 - TGA-----TT----------------------------------------------------------------------------------------------------------------------------------------TAGAACATTTGTCGT---CGGCTCGAGCCAATGCCGGAT------------CGGAGGGA---
droBia1 scf7180000302126:1798324-1798465 + TCA-----TTGCGGGATTTG--ATGGAATCC---GATTTGGAGGTGTACTACCAGGCGGCTG----GTCGGGT--------------GGAGGGC------TCCCAGGCGGAGCTGCCCTAC------------GATCTTGAGGATCCCGATCAATTGGCCACTC---CCCGTGGCAGCGGTGGCTCCAATC-----------------
droTak1 scf7180000415360:353274-353427 - GCAAGAAATTCCAGGATTTG--ATGGGATCG---CACCTGGAGGTGTTCTACCAGCCGGGTG----ATCAG----------GCC----GAGGATTTCCAATCCCAGGCCGA------------------------AGATCTCCAGCTGGAAGATGCGGAGACGC---AGCGCGGCAGCGGTGGATCGAATCACTACCCAGAGGA----
droEle1 scf7180000490996:568677-568730 - GAT----------------------------------------------------------------------------------------------------------------------------------------------ATCGATCAAATGGATATGC---GTAGATCCAGCGGTGGATCGATCCACCGTTCG---------
droRho1 scf7180000776529:358190-358246 + GAT----------------------------------------------------------------------------------------------------------------------------------------------CTCGATCTGTCGG------AGATGCGGGGCAGCGGTGGCTCCAATCACTACTCGGAGGGC---
droKik1 scf7180000302258:265715-265819 + GCA-----G-----------------AGGTGGACGAGGAGGAT-GCCACCACCA----------------------------------------------------GCGATAACG-AGGAGGGCTTGCCCCTTGAGAT------ATTAAACCGCTCGG------AGACCCGCGGCAGTGGCGGCTCC------------GAGGGC---
dp5 XL_group1a:7488494-7488527 + CGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACGATTCGGGGCAACTTTCGCAGCACCAT
droPer2 scaffold_13:2130842-2130886 + CGG------------------------------------------------------------------------------------------------------------------------------------------------AGAC----------------AATTCGGCGGCAACTTTTCGCAGCACCATTCGGAGGGG---
droVir3 scaffold_13047:11814772-11814814 + CAG--------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGCAGAG----AGGCGCACGGCGGCAGCTGCTGCAGC------------AAC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCA-----TT--CAGCTTCA--ATGGAACCA---GATCAGGAGATATACAGCCAGCCGGGTAGT---------AGAATCAGGCCAGCAGAAGGT------TATCAAGCGGCAATGCAACACGCCCTTGTCCTTGATATTCATGATTCAGATCATACGG------AGACGCGTGGCAGCGGCGGATCGAATCCCTTTCCGCAGGAC---SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...................A--ATGGAACCA---GATCAGGAGAT...................................................................................................................................................................2113.00300000000000003000
................TTCA--ATGGAACCA---GATCAGGAG.....................................................................................................................................................................2212.00200000000000002000
.........................................................................................................................................................................CGTGGCAGCGGCGGATCGAATT.................2212.00200000000000002000
.............................................................AGT---------AGAATCAGGCCAGCAGAA.....................................................................................................................2112.00201001000000000000
......................................................................................................................................................................ACGCGTGGCAGCGGCGGATCGTT...................2312.00200000000000002000
...................A--ATGGAACCA---GATCAGGAGA....................................................................................................................................................................2012.00200000000000002000
.................TCA--ATGGAACCA---GATCAGGAG.....................................................................................................................................................................2112.00200000000000002000
...............................................................................................................AATGCAACACGCCCTTGTCCTTG..........................................................................2311.00100001000000000000
............................................................................................................................................................................GGCAGCGGCGGATCGAATTT................2011.00100000000000001000
.........................................................................................................................................................................CGTGGCAGCGGCGGATCGAA...................2011.00100000000000001000
..............................................................................................................................................................................CAGCGGCGGATCGAATCCCTTT............2211.00100000000000001000
...........................................................GTAGT---------AGAATCAGGCCAGCA........................................................................................................................2011.00100001000000000000
...................................................................................................................CAACACGCCCTTGTCCTTGA.........................................................................2011.00100000000000001000
.................................................................................................................TGCAACACGCCCTTGTCCTTG..........................................................................2111.00100000000000001000
.....................................CAGGAGATATACAGCCAGCC.......................................................................................................................................................2011.00100001000000000000
..................CA--ATGGAACCA---GATCAGGAG.....................................................................................................................................................................2011.00100000000000001000
............................................................................................................................................................................GGCAGCGGCGGATCGAATCCCT..............2211.00100000000000001000
.........................................................................................................................................................................CGTGGCAGCGGCGGATCGAAT..................2111.00100000000000001000
................................................................................................................................TCCTTGATATTCATGATTC.............................................................1911.00100001000000000000
.......................................................................................................................................................................CGCGTGGCAGCGGCGGATCGA....................2111.00100001000000000000
............................................................................................................................................................GG------AGACGCGTGGCAGCGGCGG.........................2111.00100000000000001000
........................................................................................GAAGGT------TATCAAGCGGCAATG.............................................................................................2111.00100000000000001000
..A-----TT--CAGCTTCA--ATGGAACCA---G.............................................................................................................................................................................2111.00100000000000001000
.......................TGGAACCA---GATCAGGAGAT...................................................................................................................................................................1911.00100000000000001000
............................................................TAGT---------AGAATCAGGCCAGCA........................................................................................................................1911.00100001000000000000
......................ATGGAACCA---GATCAGGAGAT...................................................................................................................................................................2011.00100000000000001000
...........................................................................................................................................CATGATTCAGATCATACGG------A...........................................2011.00100000000000000100
..............................................TACAGCCAGCCGGGTAGT---------AG.....................................................................................................................................2011.00100001000000000000
............................................................TAGT---------AGAATCAGGCCAGCAGAA.....................................................................................................................2211.00101000000000000000
.........................................AGATATACAGCCAGCCGG.....................................................................................................................................................1811.00100001000000000000
.........................................................................................AAGGT------TATCAAGCGGCAA...............................................................................................1811.00100001000000000000
............................................TATACAGCCAGCCGGGTAG.................................................................................................................................................1911.00100001000000000000
.........................................................................................................AGCGGCAATGCAACACGCCCTTG................................................................................2311.00100000000000001000
..........................................................................................................GCGGCAATGCAACACGCCCTTT................................................................................2211.00100000000000001000
......................ATGGAACCA---GATCAGGAGATAA.................................................................................................................................................................2211.00100000000000001000
...........................................................................................................................................................CGG------AGACGCGTGGCAGCGGCTTT........................2320.50100000000000001000
.......................................................................................AGAAGGT------TATCAAGCGGTT................................................................................................1930.33100000000000001000
droSec2
GCA-----TT--CAGCTTCA--ATGGAACCA---GATCAGGAGATATACTGCCAGCCGGGTAGT---------AGAATCAGGCCAGTAGAGGGT------TATCAAGCGGCAATGCAACACGCCCTTGTCCTTGATATTCATGATTCAGATCATACGG------AGACGCGTGGCAGCGGCGGATCGAATCCCTTTCCGCAGGAC---SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
dm3
GTT-----TT--TAGCTTCA--ATGGATTCA---AATCAGGAGATATACTTTCAGCCGCGTTGTATGTCAGGTACAAATAGATCAGTAGTAG-------------------------AAAAATTCTTGTCTTTGATATTCATAATTTAGATCATATGG------AGATGCGTGGCAGCGGCGGATCGAATCCCTTATCGCAACAC---SizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.............................................................................................................................................TAATTTAGATCATATGG------AGATGCGTG...................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GATCGAATCCCTTATCGCAAC.....2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATACTTTCAGCCGCGTTGTATG.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTTCAGCCGCGTTGTATGTCA..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................TTCA---AATCAGGAGATATACTTTCAGC........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................TATGG------AGATGCGTGGCAGCGGCG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TAGATCATATGG------AGATGCGTGGC.................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTT-----TT---GGCTTTGAGATGCAATCA---GATCTGGAGGTGTACAACCAGCCAGGTGCT-GGTCAAGTA-----------------GAT------TCGCCGGCGGAACGGCAATACGCCCATGACCCTGACATCCATGGTTCAAATCATGCGC------AGAGACGTGGCAGCGGCGGATCGAATCCC---------------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
No Reads
droYak3
GAT-----TT--GGGTTTTG--ATGGAATCC---GATCTGAGGGTGTACTACCAGCCGGCTG----GCCAAGT-----------------GGGT------TCCCAGGCTGAACTGCAATGTGCCCTGGACCTTGATATTCATAATTCAGATCATACGG------AGACGCGTGGCAGTGGCGGTTCTAATCCTTTTCCGCAGGAC---SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
No Reads
droEug1
TGA-----TT----------------------------------------------------------------------------------------------------------------------------------------TAGAACATTTGTCGT---CGGCTCGAGCCAATGCCGGAT------------CGGAGGGA---SizeHit CountTotal NormTotal
No Reads
droBia1
TCA-----TTGCGGGATTTG--ATGGAATCC---GATTTGGAGGTGTACTACCAGGCGGCTG----GTCGGGT--------------GGAGGGC------TCCCAGGCGGAGCTGCCCTAC------------GATCTTGAGGATCCCGATCAATTGGCCACTC---CCCGTGGCAGCGGTGGCTCCAATC-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCAAGAAATTCCAGGATTTG--ATGGGATCG---CACCTGGAGGTGTTCTACCAGCCGGGTG----ATCAG----------GCC----GAGGATTTCCAATCCCAGGCCGA------------------------AGATCTCCAGCTGGAAGATGCGGAGACGC---AGCGCGGCAGCGGTGGATCGAATCACTACCCAGAGGA----SizeHit CountTotal NormTotal
No Reads
droEle1
GAT----------------------------------------------------------------------------------------------------------------------------------------------ATCGATCAAATGGATATGC---GTAGATCCAGCGGTGGATCGATCCACCGTTCG---------SizeHit CountTotal NormTotal
No Reads
droRho1
GAT----------------------------------------------------------------------------------------------------------------------------------------------CTCGATCTGTCGG------AGATGCGGGGCAGCGGTGGCTCCAATCACTACTCGGAGGGC---SizeHit CountTotal NormTotal
No Reads
droKik1
GCA-----G-----------------AGGTGGACGAGGAGGAT-GCCACCACCA----------------------------------------------------GCGATAACG-AGGAGGGCTTGCCCCTTGAGAT------ATTAAACCGCTCGG------AGACCCGCGGCAGTGGCGGCTCC------------GAGGGC---SizeHit CountTotal NormTotal
No Reads
dp5
CGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACGATTCGGGGCAACTTTCGCAGCACCATSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
No Reads
droPer2
CGG------------------------------------------------------------------------------------------------------------------------------------------------AGAC----------------AATTCGGCGGCAACTTTTCGCAGCACCATTCGGAGGGG---SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droVir3
CAG--------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGCAGAG----AGGCGCACGGCGGCAGCTGCTGCAGC------------AAC---SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.......................................................................................................................................................GAGGCAGAG----AGGCGCACGGC.................................2011.001000000000000000000000000000000010000000000000000000000000000000
CAG--------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGCAGAG----AGGC........................................1811.001000000000000000010000000000000000000000000000000000000000000000

Generated: 05/19/2015 at 05:40 AM