ID:

dsi_26661

 Coordinate:

2r:9490556-9490845 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.1 -41.1 -41.0

Flybase annnotation

three_prime_UTR [2r_9490325_9490567_+]; exon [2r_9490325_9490567_+]

No Repeatable elements found

Sense Strand Reads

##############################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAAACGTGTATCGGTGAAACGAATTTTGTACAATAAATTTATTGCCCTAAGTAAGTTTACAGACGTATGTACGCTTTATCAATTGTGTCGCGATAGCAGTGCTCAATGTAAGGAGAGGTCACCCGCTGTGGGAGTGATCGCGTGCCACCCGCATGCTATTCATGCTGCTTCACCACCCAATGATTTGAAGGTCAGTTTGGCTGCACTGATGATCGCTTGATAGGTGATTTCCCCGCCATCGTATTAAATTCGAATATATGTGTGTGTTCGCAGTGCGCCGGTTCGTTCATCCGGCCTCCGTTCCGGTTTCCCTTTCGAATGAATGTTTAGAGTTTAGGCAAAAGTTAATCACTGATTGTATGTAATCATCATCCGGAAGTTTTCCAAATT
**************************************************************************..((((((.......(((((..((((((((........))).((((((((......)).))))))((((((.....))))))...(((.(((((((((.((.....))...)))))..)))).)))...)))))...)))))))))))************************************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M053
female body
 M023
head
 SRR553488
RT_0-2 hours eggs
..........TCGGTGAAACAAATTTTGTACAATAAA................................................................................................................................................................................................................................................................................................................................................................. 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................TTTATCAATTGTGTCGCGATAGCAGTGC................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTGGCTGCACTGATGATCGCTTGATA........................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTGGCTGCACTGATGATCGCTTGA.......................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................AGTGCTCAGTGTAAGGAGACA................................................................................................................................................................................................................................................................................ 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................TTGTACAATAAATTTATTGCCCTAAG................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...................................................................................................TGCTCAATGTAAGGAGAGGTCACCCGC........................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................TTGGCTGCACTGATGATCGCTTGATAGG...................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................TTCGCAGTGCGCCGGTTCGTTCATC................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................TAAGTTTACAGACGTATGTA............................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......GTATCGGTGAAACGAATTTTGTACAAT.................................................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................TTGTGTCGCGATAGCAGTGCTCAATG.......................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............GAAACGAATTTTGTACAATAAAT................................................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................TTCGAATGAATGTTTAGAGTTTAGG.................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................GTATGTAAGCATGATCCGGG............. 20 3 2 0.50 1 0 0 0 0 0 0 0 1 0
........................................................................................................AGTGTAAGGAGAGGCCACCA.......................................................................................................................................................................................................................................................................... 20 3 2 0.50 1 0 1 0 0 0 0 0 0 0
......................................................................................................TCAATGTAAGCAGAGGT............................................................................................................................................................................................................................................................................... 17 1 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................AGTGATCGCGTGCAA................................................................................................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................TGTTTGGAGTTTTGGCAAAAG.............................................. 21 2 4 0.25 1 0 0 0 0 0 0 0 0 1
...................................................................................................................................GCGTGAGCGCGTGCCAC.................................................................................................................................................................................................................................................. 17 2 9 0.11 1 0 1 0 0 0 0 0 0 0
..CACGTGTAGCGGTGAAA................................................................................................................................................................................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................TGATGGGTGATTTCC.............................................................................................................................................................. 15 1 15 0.07 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................ATTCGAATCTATGGGTG.............................................................................................................................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................TATTTACTCATCATCCGAAA............ 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................................................................................GCGCCGGTTCGTTCCC.................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0
....CGTGTAGCGGTGAAAT.................................................................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATTTGCACATAGCCACTTTGCTTAAAACATGTTATTTAAATAACGGGATTCATTCAAATGTCTGCATACATGCGAAATAGTTAACACAGCGCTATCGTCACGAGTTACATTCCTCTCCAGTGGGCGACACCCTCACTAGCGCACGGTGGGCGTACGATAAGTACGACGAAGTGGTGGGTTACTAAACTTCCAGTCAAACCGACGTGACTACTAGCGAACTATCCACTAAAGGGGCGGTAGCATAATTTAAGCTTATATACACACACAAGCGTCACGCGGCCAAGCAAGTAGGCCGGAGGCAAGGCCAAAGGGAAAGCTTACTTACAAATCTCAAATCCGTTTTCAATTAGTGACTAACATACATTAGTAGTAGGCCTTCAAAAGGTTTAA
************************************************************************************************************************************************************************..((((((.......(((((..((((((((........))).((((((((......)).))))))((((((.....))))))...(((.(((((((((.((.....))...)))))..)))).)))...)))))...)))))))))))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................................................................................................................................................................................CAAGCAAGTAGGGCGTAG............................................................................................ 18 2 2 7.00 14 9 5 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GGCCAAAGGGAAAGC......................................................................... 15 0 1 2.00 2 0 0 1 1 0 0 0
....................................................................................................................................................................................................................AGGGAACTATCCACT................................................................................................................................................................... 15 1 1 1.00 1 0 0 0 1 0 0 0
...........................................CGGGGTTCATTCAAATGGCGGC..................................................................................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0
...........................................CGGGGTTCATTCAAATGGC........................................................................................................................................................................................................................................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................AACCGCCGTGACTACTAG................................................................................................................................................................................ 18 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GGCCTAAGGGAAAGCT........................................................................ 16 1 3 0.33 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................GTCACGCTGCCGAGCAAGT..................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0
................................................................................................................................ACTCTCACTAGCGCAGG..................................................................................................................................................................................................................................................... 17 2 4 0.25 1 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................TGGCCAAAGGGAAAGC......................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0
...........................................CGGGGTTCATTCAAATGG......................................................................................................................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0 0
..................................................................................................GACGAGTTCCATGCCTCTC................................................................................................................................................................................................................................................................................. 19 3 5 0.20 1 0 0 0 0 1 0 0
..................................TTAAAATAGCGGGATTCACT................................................................................................................................................................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................................CTAGCGAACTAGTCACT................................................................................................................................................................... 17 2 16 0.13 2 0 0 0 2 0 0 0
................................................................................................................................................................................................................................................................................................................CCAAAGGGAAGGCTT....................................................................... 15 1 9 0.11 1 0 0 0 1 0 0 0
......................................................................................................AGTCGCATTCTTCTCCAG.............................................................................................................................................................................................................................................................................. 18 3 20 0.10 2 0 0 0 2 0 0 0
..............................................................................................................................................................................................................................................................................................................GGCCTAAGGGAAAGC......................................................................... 15 1 10 0.10 1 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................................TTACTTGCGAATCTCAA........................................................ 17 2 10 0.10 1 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................TGGCCTAAGGGAAAGCT........................................................................ 17 2 20 0.10 2 0 0 1 0 0 0 1
...........................................................................................................................................................................................................................................................................................................................................................................TTAGGAGTAGGGCTTCAAT........ 19 3 14 0.07 1 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................GCCTAAGGGAAAGCT........................................................................ 15 1 17 0.06 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................AGGGAAGGCCAAAGG............................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:9490506-9490895 + dsi_26661 TAA---------ACGTGTATCGGTGA-AA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGTA---------T--------GTAC--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--ATGTAAGGA-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTATTCATGCT-------------------------------------GCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCACTGATGA--TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TATTAAATTCGAATATA-----TGTGTGTGTTCGCAGTGCGCCGGTTCGTTCATCCGGCCTCCGTTCCGGTT-TCCCTTTCGAATGAATGTTTAGAGTTTAGGCAAAAGTTAATCACTGATTGTATGTAATCATCATCCGGAAGTTTTCCAAATT
droSec2 scaffold_1:6327734-6328123 + TAA---------ACGTGTATCGGTGA-AA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGCCGTA---------T--------GTAC--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--ATGTAAGGA-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTATTCATGCT-------------------------------------GCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCACTGATGA--TCCCTTG---------------ATAGGTG-ATTTCCCCG--TCATCG--TATTAAATTCGAATATA-----TGTGTGTGTTCGCAGTGCGCCGGTTCGTTCATCCGGCCTCCGTTCCGGTT-TCCCTTTCGAATGAATGTTTACAGTTTAGGCAAAAGTTAATCACTGATTGTATGTAATCATCATCCGGAAGTTTTCCAAATT
dm3 chr2R:8812108-8812493 + TAA---------ACGTGTATCGGTGA-TA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGCA---------T--------GTGG--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--ATGTAAGAA-----------------GAAGTCACCCGCTGTGT----GAGTGATCGCGTGCCACCCGCATGCTATTCATGCT----------------GC------------------TGCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCAGTGATGA--TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TATTAAATTCGAATATACATA-TGTGTGTGTTCGCATTGCGCCGGTTTGTTCATCAGGCCTCCGTTTCGGTT-TCCCTTTCGAATGAATGTTTAG-GTTTAGGGAGAAGTTAAT----------ATGTAATAATCATTCGGAAGTTTTCCAAATG
droEre2 scaffold_4845:17011775-17012132 - CAA---------ACGTATATCGGTGA-AC---------TGAA--------TTTTTCA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGTA---------T--------GTTC--GCTTTATCAATTGTGC-C--------------GCGATAGTAG---TGCTCA--TTGTAAGGG-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCAGGCT-------------------------------------GCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCACTGA-----TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TATCAAATTCGAATATA-----C--GTGTGCTCGTACTGCGCCTGTTCGTT---------------TCGGTT-TCCCTTTCGAATAAATGTTTGGAGTTTAGATAAAAGTTAA------------TGCAACAGTCATCCGGATGATTTCTAACTG
droYak3 2R:8157582-8157953 - TAA---------ACGTGTATCGGTGA-AA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGTA---------T--------GTAC--GCTTTATCAATTGTGT-C--------------GCGATAGTGG---TGCTCA--ATGTAAGAA-----------------GAGGTCACCCGCTGGGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCATGCT-------------------------------------GCTTCACCACCACCCAATGATTTGAAGGTCAGTGT---GGCTGCACTGA-----TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TAGCAAATTCGAATATACATA-C--GTTTGCTCGTATTGCGTCG--------------------TTCCGGTT-TCCCTTTCGTATAAATGTTTGGAGTTTAGAGAAAAGTCAATAACTGGTTGATTGTAAAAGCCATCTGGAAGTTTTGTAACTG
droEug1 scf7180000409672:3821330-3821638 - TAA---------ATGTGTATCGCTGA-AA---------CGAT--------TTGTGTT----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACG---------------------AAC--GCTTTATCAATTTTGTGC--------------GCGATAGTAG---CTCTCC--ATGTAAGGA-----------------GAGGTCACCTGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCATGCT-------------------------------------GCT---TCGCCGCCCAATCATTTGAAGGTCAGTTC---GGCTGCACCGA-----TTGCTTG---------------ATTGGTG-AATTCCCCG--GAATAT--TTCTGAAATCGAATATA-----------TGCTCGTACTGTGCTTGTTTGTTTATTAGGACTCGATTTCGGTTTTCACTTTCGAAT----------------------------------------------------------------------
droBia1 scf7180000302292:1857359-1857581 + TAA---------ACGTGTATCGCTGAGAA---------CGAT--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGCC---------T-------CGAAC--GCTTTATCAATTGTGT-C--------------GCGATAGCGG---TGCTCG--ATGTAAGGA-----------------GAGGTCACCCGCCGTGG----GAGTGATCGCGTGCCGCCCGCATGCTCTTCGAGCG-------------------------------------GCC---CCACCACCCAGTGCTTTGAAGGTCAGTTC---GGCTGCACCAA-----TAGCTTC---------------ATAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415762:323170-323472 - TAA---------ACGTGTATCGCCGA-AA---------CGATTTTTGAT-TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACG---------------------AAC--GCTTTATCAATTGTGT-C--------------GCGATAGTGGCGCTGCTCA--ATGTAAGGA-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGTTCTTCGTGCTTC----------GT--GC------------------GGCC---TCACCACCCAGTGATTTGAAGGTCAGCTC---GGCTGCACCGA-----TTGCTTGATAT---------TGATAGGTG-ATTTCCCCG--GCATCG--CTAAAAACTGGAATATA-----TA----TGCTCGTATTGCGCTTGTTTATTTCTC----------------------------------------------------------------------------------------------------
droEle1 scf7180000491215:232415-232640 - TAA---------AAACGTATCGCTGA-AA---------CGA---------TTTTGTACGTTCAATAAATTGATTGCCC-TA---AGTAAGTTTACAGACC-------------------AGACC--GCCTTATCAATTGTGT-C--------------GCGATAGTAGAG-TGCTAA--ATGTAAGAA-----------------GAGGTCACCCACTGTGG----GAGTGATCGCATGGCACCCGCATGCTATTCATGCG-------------------------------------GAC---CCACTGGCCGATGACATGAAGGTCAGTTC---GGCATCACCGA-----TCGCTTG---------------ATGGGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779957:85226-85508 - TAA---------ACGT--ATCGCTGA-AC---------CGAT--------TTTT---CGTTCAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACC-------------------AGACC--GTCTTATCAATTGTGT-C--------------GCGATAGTAGAG-TGCTAA-AATGTAAGGG-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCATGCCGCCCGCATGCTATTCATGCG-------------------------------------CAT---CTAGTGGCCAATGACGTGAAGGTCAGTTC---GGCATCACCGA-----TCGATCG---------------ATAGGTGGAAAATCTCG--GAATTGC-TTTTAAATTTCAATCTA-----T------ATTCGCAATGCCCTGATTTGTTTAT-----------------------------------------------------------------------------------------------------
droFic1 scf7180000454066:466934-467214 - TAAAATAGAGAAACGT--GTCGCAGA-AC---------CGAT--------TTTTGTA----CAATAAATTTATTGCCCCTA---AGTAAGTTTACAGACGACGA-------T-------CGAAA--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--GTGTAAGAA-----------------GAGGTCACCTGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCAGGC---------------------------------------------------CCGATGACGTGAAGGTCAGTTC---GGCTGCACCGA-----TCGCTTG---------------GT---TG-ATTATTCCGCAGAATCGCTTTTTAAATTCGAATATA-----T-------TTCGTATTGCGCTGGTTTGTTTAT-----------------------------------------------------------------------------------------------------
droKik1 scf7180000302670:239198-239467 + GAA---------ACGT--ATCGCAGA-AC------AACCGAT--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTAACAGAC------------T--------GCTG--GCCGTATCAATTCTGT--GTGTGTCGGGATTCGCGATAGT------GCCCACCGTGTAAGGCG---GAG----------GAGGTCACCCGTTGGGG----GAGTGATCGCATGCCGGCCGCATGCTGACCACG---------------------GTTCCATCTCGTT-------------------------TGTGAAGGTCAGTTAGCAGGCTGCACCGA-----TGGCTCA---------------TTGGGTG-ATTTTTCCATCGAATTG--TTTTGAGT--------------------------------------TTGTTTAC--------------------------------------------------------------------------------------------------GTG
droAna3 scaffold_13266:6280597-6280959 + TAA---------ACGT--ATCGCAGA-ATCGAAACAACCAAA------C-TTTTGTA----TAATAAATTTATTGC-C-TA---AGTAAGTTTACAGAG-T-------------------GCTCTCTCCGTATCAATTATGC-CGTGTGCT-----GTGTGATAGT-G---CGTTCA--TTGTAAGAAA---GAGCGATGGATTGGGGTACACCCACTGGGG----GAGTGATCGCATGCCGCCCGCATGCTGTTCGCGGTTCTCTGGTCCCTGTTCACGGCTCAATCTCGTTCAGCGAAT---C----GACCACAGACCTGAAGGTC--------GATTGCACCGA-----TCGATTGCCCTCTGCGCCCCTACTAAGTG-ATTTCCCCG--GAATTA--TTCCAAGTTCTAGTATACCTA-T--AT-TGATTATATTGCGTTGGTTTGTTTACACAG-------------------------------------------------------------------------------------------------
droBip1 scf7180000395839:437614-437965 + TAA---------ACGT--ATCGCAGA-ATC-AAACTACCGAA------CATTTTGTA----CAATAAATTTATTGC-C-TA---AGTAAGTTTACAGAGT--------------------GCTC--TGCGTATCAATTATGC-CGTGTGGTATGGTGTGTGATAGT-G---CGTTCA--TTGTAAAAAAAAAGACCTATGG-TTGGGGCTCACCCACTGGGG----GAGTGATCGCATGCCGCCCGCATGCTGTTCG--CC------------GTTCACGGCTCAATCTCGTTCGGCGAAT---C----GACCACAGACGTGAAGGTC--------GACTGCACCGA-----TCGATTGCCCTCTTCGCCTCCACTAAGTG-ATTTCCCTG--GAATCA--TTCCGAGTTCTAGTATACCTACTATAT-TGATTATATTGCGTTGGTTTGTTTA------------------------------------------------------------------------------------------------------
dp5 3:14338132-14338392 + TAA---------AAGTACAACG--GA-AT----------TA---------TTTAGTC----TAATAAATTTATTACCC-CAAAAAGTAAGTTTACATTCGTTCATTCTGCCTGTGGGCCACTCT--G--CAATCAATTGTGC-C--------------GTGATAGTGT---T--TCT--GTGTAAGGCC----------------GAGTTCACACGCTGTGGCTGTGCGCGGTCGCATGCCGTACTCATGATC---AGGT-----------CTGTTCACGGTTGAATCTCGTT----------GCCGCCGTGCAAA---GTCAAGGCCAGTTC---GTCTGCACAGTTTATGTTGATTG---------------CCAAGTG-ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:979264-979524 - TAA---------AAGTACAACG--GA-AT----------TA---------TTTAGTC----TAATAAATTTATTACCC-CAAAAAGTAAGTTTACATTCGTTCATTCTGCCTGTGGGCCACTCT--G--CAATCAATTGTGC-C--------------GTGATAGTGT---T--TCT--GTGTAAGGCC----------------GAGCTCACACGCTGTGGCTGTGCGCGGTCGCATGCCGTACTCATGATC---AGGT-----------CTGTTCACGGTTGAATCTCGTT----------GCCGCCGTGCAAA---GTCAAGGCCAGTTC---GTCTGCACAGTTTATGTTGATTG---------------CCAAGTG-ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004510:1086271-1086332 - CCA---------AAGAAAATACAAGA-AA-----TAA-CCAA--------TT---------TAAT--ATTTATTGCCC-TA---AGTAAGTTTACAGACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAA---------ACGTGTATCGGTGA-AA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGTA---------T--------GTAC--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--ATGTAAGGA-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTATTCATGCT-------------------------------------GCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCACTGATGA--TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TATTAAATTCGAATATA-----TGTGTGTGTTCGCAGTGCGCCGGTTCGTTCATCCGGCCTCCGTTCCGGTT-TCCCTTTCGAATGAATGTTTAGAGTTTAGGCAAAAGTTAATCACTGATTGTATGTAATCATCATCCGGAAGTTTTCCAAATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................TTTATCAATTGTGT-C--------------GCGATAGCAG---TGC..............................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................TT---GGCTGCACTGATGA--TCGCTTG---------------ATA...................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................TT---GGCTGCACTGATGA--TCGCTTG---------------A.....................................................................................................................................................................................2411.00100000010000000000
....................................................TTGTA----CAATAAATTTATTGCCC-TA---AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...........................................................................................................................................................................TGCTCA--ATGTAAGGA-----------------GAGGTCACCCGC...................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................TT---GGCTGCACTGATGA--TCGCTTG---------------ATAGG.................................................................................................................................................................................2811.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAGTGCGCCGGTTCGTTCATC....................................................................................................2511.00100000010000000000
......................................................................................TAAGTTTACAGACGTA---------T--------GTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000100000000
................GTATCGGTGA-AA---------CGAA--------TTTTGTA----CAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
........................................................................................................................................TTGTGT-C--------------GCGATAGCAG---TGCTCA--ATG......................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
........................GA-AA---------CGAA--------TTTTGTA----CAATAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAATGAATGTTTAGAGTTTAGG....................................................2511.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCGGTTCGTTCCC.....................................................................................................16200.05100000000001000000
droSec2
TAA---------ACGTGTATCGGTGA-AA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGCCGTA---------T--------GTAC--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--ATGTAAGGA-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTATTCATGCT-------------------------------------GCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCACTGATGA--TCCCTTG---------------ATAGGTG-ATTTCCCCG--TCATCG--TATTAAATTCGAATATA-----TGTGTGTGTTCGCAGTGCGCCGGTTCGTTCATCCGGCCTCCGTTCCGGTT-TCCCTTTCGAATGAATGTTTACAGTTTAGGCAAAAGTTAATCACTGATTGTATGTAATCATCATCCGGAAGTTTTCCAAATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAATGAATGTTTACAGTTTAGGC...................................................2611.0011000
...................................................................................................................................................................................................................................AGTGATCGCGTGCCACCCGT.....................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGTTTAGGCAAAAGTTA...........................................2111.0010100
dm3
TAA---------ACGTGTATCGGTGA-TA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGCA---------T--------GTGG--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--ATGTAAGAA-----------------GAAGTCACCCGCTGTGT----GAGTGATCGCGTGCCACCCGCATGCTATTCATGCT----------------GC------------------TGCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCAGTGATGA--TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TATTAAATTCGAATATACATA-TGTGTGTGTTCGCATTGCGCCGGTTTGTTCATCAGGCCTCCGTTTCGGTT-TCCCTTTCGAATGAATGTTTAG-GTTTAGGGAGAAGTTAAT----------ATGTAATAATCATTCGGAAGTTTTCCAAATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................TA----CAATAAATTTATTGCCC-TA---AGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TTGCCC-TA---AGTAAGTTTACAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGATGA--T...........................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010
..................ATCGGTGA-TA---------CGAA--------TTTTGTA----CAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AA---------ACGTGTATCGGTGA-TA---------CGAA--------TT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAA---------ACGTGTATCGGTGA-TA---------CG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-GTTTAGGGAGAAGTTAAT----------ATG............................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000
..................ATCGGTGA-TA---------CGAA--------TTTTGTA----CAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGATGA--TC..........................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
...................................................................................................................................................................................................................................................................................................................................................TGCAGTGATGA--TCGCTTG---------------ATAGGTG-A.............................................................................................................................................................................2612.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................GTGA-TA---------CGAA--------TTTTGTA----CAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GTGATGA--TCGCTTG---------------ATAGGTG-..............................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGATGA--............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGATG...............................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................GA-TA---------CGAA--------TTTTGTA----CAATAAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AGCAG---TGCTCA--ATGTAAGAA-----------------G..............................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................GCTGCAGTGATGA--TCGCT.......................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000
.AA---------ACGTGTATCGGTGA-TA---------CG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGATA...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................TATCGGTGA-TA---------CGAA--------TTTTGTA----CAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATTCGGAAGTTTTCCAA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..................ATCGGTGA-TA---------CGAA--------TTTTGTA----CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................A---------T--------GTGG--GCTTTATCAATTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................AATTTATTGCCC-TA---AGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AATGATTTGAAGGTCAGTTT---GGCT........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACGTGTATCGGTGA-TA---------CGAA--------TTTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TA---------CGAA--------TTTTGTA----CAATAAATTTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................T--------GTGG--GCTTTATCAATTGTGT-C--------------GCGA..........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTTT---GGCTGCAGTGATGA--TCGCTTG---------------ATA...................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................AGTGATGA--TCGCTTG---------------ATAGGT................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCACCACCCAATGATTTGAAGGTC....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTT---GGCTGCAGTGATGA--TCGC........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................CTCA--ATGTAAGAA-----------------GAAGTCACCCGC...................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGTATCGGTGA-TA---------CGAA--------TTTTGTA----C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TGT----GAGTGATCGCGTGCCACC........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AA---------ACGTGTATCGGTGA-TA---------CGAA--------TTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GACGCA---------T--------GTGG--GCTTTATC......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACGTGTATCGGTGA-TA---------CGAA--------TTTTGTA----A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATCGGTGA-TA---------CGAA--------TTTTGTA----CAAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGA-TA---------CGAA--------TTTTGTA----CAATAAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTCGCATTGCGCCGGTTTG..........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTTCGCATTGCGCCGGTTT...........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-TGTGTGTGTTCGCATTGCGCCGG..............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................CAATGATTTGAAGGTCAGTTT---GGC.........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................A-TA---------CGAA--------TTTTGTA----CAATAAATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGATCGCGTGCCACCCGCATG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TG-ATTTCCCCG--CCATCG--TATT.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GTGT----GAGTGATCGCGTGCCACCCGCA....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................GG--GCTTTATCAATTGTGT-C--------------GC............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGATGA--TT..........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCTGCAGTGATGA--TCGCTTG---------------ATAGG.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................AATTGTGT-C--------------GCGATAGCAG---.................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................ATTTATTGCCC-TA---AGTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGTTTAG-GTTTAGGGAGAAGT.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................CA--ATGTAAGAA-----------------GAAGTCACCCGCTGTGG----..........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAGGCCTCCGTTTCGGT....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................ACCCAATGATTTGAAGGT.....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGCAGTGATGA--TCGCTTG---------------ATAG..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CAGTGATGA--TCGCTTG---------------ATAGG.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.AA---------ACGTGTATCGGTGA-TA---------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................ATGATTTGAAGGTCAGTTT---GGCTGCAGT...................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................TGATTTGAAGGTCAGTTT---GGCTGCAGT...................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TAGCAG---TGCTCA--ATGTAAGAA-----------------GAAGTC.........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................TTGTGT-C--------------GCGATAGCAG---.................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AGTGATGA--TCGCTTG---------------ATAGGTG-A.............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGTTT---GGCTGCAGTGAT................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................AGTTTACAGACGCA---------T--------GTGG--GC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TATCAATTGTGT-C--------------GCGATAGCAG---T................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CA---------T--------GTGG--GCTTTATCAATTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AG---TGCTCA--ATGTAAGAA-----------------GAAGTC.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTAG-GTTTAGGGAGAAGTTAAT----------ATG............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AAATTTATTGCCC-TA---AGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGGTGA-TA---------CGAA--------TTTTGTA----CAATAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATTCGAATATACATA-TGT..................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................C-TA---AGTAAGTTTACAGACGCA---------T--------GTGG--GC............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAA---------ACGTATATCGGTGA-AC---------TGAA--------TTTTTCA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGTA---------T--------GTTC--GCTTTATCAATTGTGC-C--------------GCGATAGTAG---TGCTCA--TTGTAAGGG-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCAGGCT-------------------------------------GCT---TCACCACCCAATGATTTGAAGGTCAGTTT---GGCTGCACTGA-----TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TATCAAATTCGAATATA-----C--GTGTGCTCGTACTGCGCCTGTTCGTT---------------TCGGTT-TCCCTTTCGAATAAATGTTTGGAGTTTAGATAAAAGTTAA------------TGCAACAGTCATCCGGATGATTTCTAACTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTTCGAATAAATGTTTGGAG..........................................................2411.0010000010
...................................................................................................................................................................................................................................................................................................................................................TGCACTGA-----TCGCTTG---------------ATAGGT................................................................................................................................................................................2111.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCGTT---------------TCGGTT-TCCCTTTCGA........................................................................2511.0010001000
droYak3
TAA---------ACGTGTATCGGTGA-AA---------CGAA--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGTA---------T--------GTAC--GCTTTATCAATTGTGT-C--------------GCGATAGTGG---TGCTCA--ATGTAAGAA-----------------GAGGTCACCCGCTGGGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCATGCT-------------------------------------GCTTCACCACCACCCAATGATTTGAAGGTCAGTGT---GGCTGCACTGA-----TCGCTTG---------------ATAGGTG-ATTTCCCCG--CCATCG--TAGCAAATTCGAATATACATA-C--GTTTGCTCGTATTGCGTCG--------------------TTCCGGTT-TCCCTTTCGTATAAATGTTTGGAGTTTAGAGAAAAGTCAATAACTGGTTGATTGTAAAAGCCATCTGGAAGTTTTGTAACTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
TAA---------ACGTGTATCGGTGA-AA---------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAAATGTTTGGA...........................................................15200.05100000000001
droEug1
TAA---------ATGTGTATCGCTGA-AA---------CGAT--------TTGTGTT----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACG---------------------AAC--GCTTTATCAATTTTGTGC--------------GCGATAGTAG---CTCTCC--ATGTAAGGA-----------------GAGGTCACCTGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCATGCT-------------------------------------GCT---TCGCCGCCCAATCATTTGAAGGTCAGTTC---GGCTGCACCGA-----TTGCTTG---------------ATTGGTG-AATTCCCCG--GAATAT--TTCTGAAATCGAATATA-----------TGCTCGTACTGTGCTTGTTTGTTTATTAGGACTCGATTTCGGTTTTCACTTTCGAAT----------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TAA---------ACGTGTATCGCTGAGAA---------CGAT--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACGCC---------T-------CGAAC--GCTTTATCAATTGTGT-C--------------GCGATAGCGG---TGCTCG--ATGTAAGGA-----------------GAGGTCACCCGCCGTGG----GAGTGATCGCGTGCCGCCCGCATGCTCTTCGAGCG-------------------------------------GCC---CCACCACCCAGTGCTTTGAAGGTCAGTTC---GGCTGCACCAA-----TAGCTTC---------------ATAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAA---------ACGTGTATCGCCGA-AA---------CGATTTTTGAT-TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACG---------------------AAC--GCTTTATCAATTGTGT-C--------------GCGATAGTGGCGCTGCTCA--ATGTAAGGA-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCGTGCCACCCGCATGTTCTTCGTGCTTC----------GT--GC------------------GGCC---TCACCACCCAGTGATTTGAAGGTCAGCTC---GGCTGCACCGA-----TTGCTTGATAT---------TGATAGGTG-ATTTCCCCG--GCATCG--CTAAAAACTGGAATATA-----TA----TGCTCGTATTGCGCTTGTTTATTTCTC----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAA---------AAACGTATCGCTGA-AA---------CGA---------TTTTGTACGTTCAATAAATTGATTGCCC-TA---AGTAAGTTTACAGACC-------------------AGACC--GCCTTATCAATTGTGT-C--------------GCGATAGTAGAG-TGCTAA--ATGTAAGAA-----------------GAGGTCACCCACTGTGG----GAGTGATCGCATGGCACCCGCATGCTATTCATGCG-------------------------------------GAC---CCACTGGCCGATGACATGAAGGTCAGTTC---GGCATCACCGA-----TCGCTTG---------------ATGGGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TAA---------ACGT--ATCGCTGA-AC---------CGAT--------TTTT---CGTTCAATAAATTTATTGCCC-TA---AGTAAGTTTACAGACC-------------------AGACC--GTCTTATCAATTGTGT-C--------------GCGATAGTAGAG-TGCTAA-AATGTAAGGG-----------------GAGGTCACCCGCTGTGG----GAGTGATCGCATGCCGCCCGCATGCTATTCATGCG-------------------------------------CAT---CTAGTGGCCAATGACGTGAAGGTCAGTTC---GGCATCACCGA-----TCGATCG---------------ATAGGTGGAAAATCTCG--GAATTGC-TTTTAAATTTCAATCTA-----T------ATTCGCAATGCCCTGATTTGTTTAT-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TAAAATAGAGAAACGT--GTCGCAGA-AC---------CGAT--------TTTTGTA----CAATAAATTTATTGCCCCTA---AGTAAGTTTACAGACGACGA-------T-------CGAAA--GCTTTATCAATTGTGT-C--------------GCGATAGCAG---TGCTCA--GTGTAAGAA-----------------GAGGTCACCTGCTGTGG----GAGTGATCGCGTGCCACCCGCATGCTCTTCAGGC---------------------------------------------------CCGATGACGTGAAGGTCAGTTC---GGCTGCACCGA-----TCGCTTG---------------GT---TG-ATTATTCCGCAGAATCGCTTTTTAAATTCGAATATA-----T-------TTCGTATTGCGCTGGTTTGTTTAT-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GAA---------ACGT--ATCGCAGA-AC------AACCGAT--------TTTTGTA----CAATAAATTTATTGCCC-TA---AGTAAGTTAACAGAC------------T--------GCTG--GCCGTATCAATTCTGT--GTGTGTCGGGATTCGCGATAGT------GCCCACCGTGTAAGGCG---GAG----------GAGGTCACCCGTTGGGG----GAGTGATCGCATGCCGGCCGCATGCTGACCACG---------------------GTTCCATCTCGTT-------------------------TGTGAAGGTCAGTTAGCAGGCTGCACCGA-----TGGCTCA---------------TTGGGTG-ATTTTTCCATCGAATTG--TTTTGAGT--------------------------------------TTGTTTAC--------------------------------------------------------------------------------------------------GTGSizeHit CountTotal NormTotal
No Reads
droAna3
TAA---------ACGT--ATCGCAGA-ATCGAAACAACCAAA------C-TTTTGTA----TAATAAATTTATTGC-C-TA---AGTAAGTTTACAGAG-T-------------------GCTCTCTCCGTATCAATTATGC-CGTGTGCT-----GTGTGATAGT-G---CGTTCA--TTGTAAGAAA---GAGCGATGGATTGGGGTACACCCACTGGGG----GAGTGATCGCATGCCGCCCGCATGCTGTTCGCGGTTCTCTGGTCCCTGTTCACGGCTCAATCTCGTTCAGCGAAT---C----GACCACAGACCTGAAGGTC--------GATTGCACCGA-----TCGATTGCCCTCTGCGCCCCTACTAAGTG-ATTTCCCCG--GAATTA--TTCCAAGTTCTAGTATACCTA-T--AT-TGATTATATTGCGTTGGTTTGTTTACACAG-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAA---------ACGT--ATCGCAGA-ATC-AAACTACCGAA------CATTTTGTA----CAATAAATTTATTGC-C-TA---AGTAAGTTTACAGAGT--------------------GCTC--TGCGTATCAATTATGC-CGTGTGGTATGGTGTGTGATAGT-G---CGTTCA--TTGTAAAAAAAAAGACCTATGG-TTGGGGCTCACCCACTGGGG----GAGTGATCGCATGCCGCCCGCATGCTGTTCG--CC------------GTTCACGGCTCAATCTCGTTCGGCGAAT---C----GACCACAGACGTGAAGGTC--------GACTGCACCGA-----TCGATTGCCCTCTTCGCCTCCACTAAGTG-ATTTCCCTG--GAATCA--TTCCGAGTTCTAGTATACCTACTATAT-TGATTATATTGCGTTGGTTTGTTTA------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TAA---------AAGTACAACG--GA-AT----------TA---------TTTAGTC----TAATAAATTTATTACCC-CAAAAAGTAAGTTTACATTCGTTCATTCTGCCTGTGGGCCACTCT--G--CAATCAATTGTGC-C--------------GTGATAGTGT---T--TCT--GTGTAAGGCC----------------GAGTTCACACGCTGTGGCTGTGCGCGGTCGCATGCCGTACTCATGATC---AGGT-----------CTGTTCACGGTTGAATCTCGTT----------GCCGCCGTGCAAA---GTCAAGGCCAGTTC---GTCTGCACAGTTTATGTTGATTG---------------CCAAGTG-ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................CGTTCATTCTGCCTGTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TAA---------AAGTACAACG--GA-AT----------TA---------TTTAGTC----TAATAAATTTATTACCC-CAAAAAGTAAGTTTACATTCGTTCATTCTGCCTGTGGGCCACTCT--G--CAATCAATTGTGC-C--------------GTGATAGTGT---T--TCT--GTGTAAGGCC----------------GAGCTCACACGCTGTGGCTGTGCGCGGTCGCATGCCGTACTCATGATC---AGGT-----------CTGTTCACGGTTGAATCTCGTT----------GCCGCCGTGCAAA---GTCAAGGCCAGTTC---GTCTGCACAGTTTATGTTGATTG---------------CCAAGTG-ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................GTGGGCCACTCT--G--CAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droWil2
CCA---------AAGAAAATACAAGA-AA-----TAA-CCAA--------TT---------TAAT--ATTTATTGCCC-TA---AGTAAGTTTACAGACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 07:39 PM