ID:

dsi_26614

 Coordinate:

3r:6337085-6337234 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.1 -9.9 -9.6 -9.6

Flybase annnotation

five_prime_UTR [3r_6337073_6337084_-]; CDS [3r_6336536_6337072_-]; exon [3r_6336426_6337084_-]; intron [3r_6337085_6337403_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACAGCAGATTGAAAAAATTACATAATTTTTGCGAGCATAACTCGCCGTGCGTAATGTCGATAGTTTGTAACTAAAAAAAGCAGAGGATACATTTCAACTAACGGGAATATCGCTGCACAGCTCCAGAACACCAAGAAAGCACTTACCACCTCTTTAGACCCACAAACCTAACCTCATCCGTTTTTGTTGTTGTCTTGCAGTATCTGTGCAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTG
*******************************************************..........((...(((........(((((.....((((........(((.....(((....))))))..........))))..........))))).)))...))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 O001
Testis
 O002
Head
 SRR902009
testis
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902008
ovaries
......................................................................................................................................................................................................................GGCCGCCCGCCGTATCGCCCAATCCTCG........ 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCGTTATGTCGATAGTTTGT...................................................................................................................................................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0
.....................................................................................................................................................................................................................................CGCCCAATCCTCGATCAACTG 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTGTGCAGAATGGCCGCCCGCCGTA...................... 26 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................ATGGCCAAATCCTCGATCAA... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATCAACTG 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGCCCAATCCTCGAT...... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................TAACTCGCCGTGCGTAATGTC................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGATCAAC.. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GCCCAATCCTCGATCAACTG 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGTGCAGAATGGCCGCCCGCCGTAA..................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................................................CCCAATGCTCGATCAAC.. 17 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AATATCTGTGCAGAATGGCCGCCCGC.......................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCTGTGCAGAATGGCCGCCCGC.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTATCTGTGCAGAATGGCC................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................GTCGATAGTTTGTAACTAA................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TCTGTGCAGAATGGCCGCCC............................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CTGTGCAGAATGGCCGCCCGCC......................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATAATATCTGTGCAGAATGGCCGCCCGC.......................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAATGTCGATGGTTTGTGACT.................................................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TCTTTAAACCCAAAAACCTAAC.............................................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTAATGTCGATGGTTTGTAACT.................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTACCACCTCTTTAGACCCA........................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................GCATAACTCGCCGTGCGTAAT................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................ATACGTTTGAACTACCGGGA................................................................................................................................................ 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................AGCATAACTCGCCGTGCGTAA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TCTGTGCAGAATGGCCGCCCGCCGTA...................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GTTGTCTTGCAGTATCTG............................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CGCTGCACAGCTCCAGAACACCAAGAA................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TTATCTGTGCAGAATGGCCGCCC............................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCAACT. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................TCCGTTTTTGTTGTTGTC........................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................ATTACATTTCAACTAACGGGA................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCCAGAACACCAAGAAAG............................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATTTGTGCAGAATGGCCGCCCGCCGTA...................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CCAATCCTCGATCAACTG 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CCCAATGCTCGATCAA... 16 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................ACGGGTATATCGATGCA..................................................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................AATCTCGAGAGTCTGTAACT.................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................TAACGGTAAGATCGCTGCC..................................................................................................................................... 19 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGTCGTCTAACTTTTTTAATGTATTAAAAACGCTCGTATTGAGCGGCACGCATTACAGCTATCAAACATTGATTTTTTTCGTCTCCTATGTAAAGTTGATTGCCCTTATAGCGACGTGTCGAGGTCTTGTGGTTCTTTCGTGAATGGTGGAGAAATCTGGGTGTTTGGATTGGAGTAGGCAAAAACAACAACAGAACGTCATAGACACGTCTTACCGGCGGGCGGCATAGCGGGTTAGGAGCTAGTTGAC
****************************************************************************************..........((...(((........(((((.....((((........(((.....(((....))))))..........))))..........))))).)))...))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O002
Head
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
..........................................................................................................TATAGTGACGTGTCGAGGTCT........................................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................TATAGCGACGTGTCGAGGTCT........................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................AGGTCTTGTGGTTCTTTCGTGA........................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................GATTTTTTTCGTCTCCTA.................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................CGGCGAGTCGAGGTCTTGT........................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GGATTGGAGTAGGCGAAAA................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GGGTTACGAGCTAGTT... 16 1 5 0.80 4 0 0 0 2 1 0 0 1 0 0
..............................CCCTAGTATTGAGCGGCA.......................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................CCTGTGGTTCTTTCGT............................................................................................................. 16 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................TACAGGGTTACGAGCTAGTT... 20 3 13 0.15 2 0 0 0 1 0 0 1 0 0 0
...................................................................................................................................................................................................................................TATCGGGTTACGAACTAGTT... 20 3 9 0.11 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................AAAGGGTTACGAGCTAGTT... 19 3 20 0.10 2 0 0 0 0 0 0 1 0 1 0
.......................................................................................................................................................................................................................................GGGTTACGAGCTAGT.... 15 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTGGTTACGAGCTAGTT... 17 2 11 0.09 1 0 0 0 0 1 0 0 0 0 0
.............................................................................TTCGTTTCCTATGTCAAGTC......................................................................................................................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................................GGCTGCATAGCTGGTT.............. 16 2 19 0.05 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................AGAGAAGTGTCGCGGTCT........................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:6337035-6337284 - dsi_26614 ACA-------G---CAGA-TTGAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCG-TAAT-GTC-GA----T-A------GTTTGTAACTAAAAAAAGCA------GAGGATACATTTCAACTAACGGGAATATCG------------CTGCACA-GC--------------------------------------------TCCAGAACACCAAG-AAAGC----------------------------ACTTACCACCT-----CTTTAG-ACCCACAAACCTAAC-CTCAT--CC-------GTTT-TTGTTGTTGTCTTGCAGTATCTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTG
droSec2 scaffold_77:17947-18195 - ATT-------G---AAGA-TTGAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCG-TTAT-GTC-GA----T-A------ATCTGTAACTAAAAAA-GCA------GAGGTTACATTTCAACTAATGTGAATATCG------------CTGCACA-GC--------------------------------------------TCCAGAACACCAAG-AAACC----------------------------ACTTACCACCT-----CTTTAA-ACCCAAAAACCTAAC-CTCAT--CC-------GTTT-TTGTTGTTGTCTTGCAGTATTTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTG
dm3 chr3R:14920916-14921168 + ATT-------G---AGGATTGAAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCA-TTAT-GTC-GA----TAA------GTCTGCAACTAAAGAA-GCA------GAGATTACATTTCAACTAATAAGAATATCG------------CTGCACA-GT--------------------------------------------TCCAGGACACCTAG-AAATC----------------------------ACTTACCACCT-----CTATAA-ACCCAAAAACCTAAC-CTCATCCCC-------GCTT-TTGTTGTTGTCTTGCAGTATCTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTG
droEre2 scaffold_4770:6709324-6709572 - ACT-------G---CGGA-TAGAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCG-TTAT-GCC-GA----T-T------CTCTATTTCTAAGGAA-ACA------GAGATTACATTTCAACTAATGAGAACATCG------------AGGCACA-GC--------------------------------------------TCCAGAACACATAA-AAATC----------------------------CCTTCCCACCT-----TTATAA-GCCCAAAAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTGTCTTGCAGTATTTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTG
droYak3 v2_chr3R_random_311:3590-3838 + ATT-------G---CGGA-TAGAAAAAATTACATAATATTTGCGAGCATAACTCGC-CGTGCG-TTAT-GCC-AA----T-T------GTCTATTATTAAAGAA-CCAGA------GATTACATTTCAACTAACGAGAAAATCG------------AGGCACA-GC--------------------------------------------TGCAGAACACCTAA-AAGCC----------------------------CCGTACCACCT-----TTATAA-GCCCAATAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTGTCTTGCAGTATCTGTG---CAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATCAACTG
droEug1 scf7180000409804:1165340-1165589 + ACT-------G---CGGT-T-AAAAAAATTACATAATTTTTGCAGGCATAACTTCCCCGTGTT-TAAT-GGC-TA----G-G------GAATATAC-TTAAGAA-CCATTGATT--ATCACTAAGTTAACTAAG----------C--ATATTATCTAGACAGA-GTAGAA-----------------------GCAAG-----------------T---CCTAGAAAAAC----------------------------ATTTA----AATTATT-TC-----CCGTACAACCTAAC-CTCAT--CA-------GCTT-TTGTTGTTGTCTTTCAGTATTTGTG---AAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATTAACTG
droBia1 scf7180000302402:675821-676070 + ACT-------G---CGGT-TAAGAAAAATTACATAATTTTTGCGAGCATATTTTTC-CTTGTG-TTAT-GAA-TA----G-G------GATTATGT-CAAGGAG-CCAGTG-----ATTGCCACTTAAACTAGA----------C--ACCTAATTCCAACCAA-GTTCAAGGGAAA-----------------------------------------------------CTCCTAAAGAGC-------------------TTG----T-CCACTTTCTTC-CACCGAGAACCTAAC-CTCAT--CC-------GTTG-TTGTTGTTGTCTTCCAGTTCCTGTG---CAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATCAACTG
droTak1 scf7180000415256:417112-417361 + ACT-------G---CGGT-TAAGAAAAATTACATAATTTTTGCAGGCATAATTTTC-CGTGTG-TTAT-GCC-AG----G-G------GAAAATAG-CAAAGAA-CCATCGAT-----TGTTGAATAATCCAGG----------C--ACCCTAACTAAACCAA-GTGCAGGGGAAA-----------------------------------------------------CTTTCAATAAGC-------------------TCT----A-CCAATTTCTGC-CACCAAAAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTTTCTTCCAGTTCTTGTG---CAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGGTTAACTG
droEle1 scf7180000490994:677705-677956 + ACT-------G---CTGA-TGTTAAAAATTACATAATTTTTGCAGGCATAATTTTC-CGTATG-TTAT-GCC-AA----G-T------GTTTGCAG-GAAAGAA-GCGCTG------ACCAATCATAAAC---------CCTATC--ATTCCAATTA-AGCAA-ACCCAAAAGAAA-----------------------------------------------------CCCGCTTGCAAC-------------------TTC----TACCATTTTCT--GCTGCGACAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTGTTTTCCAGTATTTGTGCTGCAGAATGGCCGCCCGCCGCATCGCCAAATCCTCGGTTAACTG
droRho1 scf7180000777280:772-1031 - TCGTCAAACTGCTGCGGT-T--AAAAAATTACATAATTTTTGCAGGCATAATTTTC-CGTGTG-CTAT-GCC-AA----G-T------GTCTGTAG-AAAAGAA-CCAATG-----GACTAAACTTAAATTAGG----------C--ATACTAGTTA-ACGAA-ACCCAAAGAAAA-----------------------------------------------------CCCTCCTGCAAT-------------------TAT----AACAAATTTTT--GCCTCGACAACCTAAC-CTCAT--CC-------GATT-TTGTTGTTGTTTTCCAGTATTTGTGCTGCAGAATGGCCGCCCGCCGCATCGCCAAATCCTCGATTAACTG
droFic1 scf7180000453812:114554-114807 - GCA-------G---CGGA---AAAAAAATTACATAATTTTGGCACGCATAATTTTT-CGAGTG-TTAT-GCC-AA----A-T------GTTTTTACTGAAAAAAACAACT------GAATAGACTTAAGCTAAG----------C--ACAATAGTTATGCA-A-ACTTAAA----------------------------------ATCGC-----T---T-----------CTTTTAAAAC-------------------AGA----CACTATT-TCC--CCCTTGACAACCTAAC-CTCAT--CCATTC---GCTT-TTGTTGTTGTTTTCCAGCGCTAGTGGTTCAGAATGGCTGCCCGCCGCATCGCCCAATCCTCGATCAACTG
droKik1 scf7180000300058:169406-169663 - GCG-------G---CAGGCCAAAAAAAATTACATAATTTTTGCAGGCATAATTTTC-CCTACGACTGC-GCC-TG----G-T----TACTTT-------GAGAA-CCACTCAC---GATTTAATGCAAACCAAG----------C--ATTA-AATTAAGCA-GCGATTGAG----------------------------------ACCACTCCAGTTCCCGAAG-G-------------GT-------------------TCC----CTTTATTTTCT---CATAACAAACCTAAC-CTCATACCC-------GTTT-TTGTTGTTGTTTCACAGCTCTTGTGCTGCAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATCAACTG
droAna3 scaffold_13340:23476622-23476872 - GAA-------G---CCGA-AGAAAAAAATTACATAATTTTTGCAAGCATAACTTCT-GCTGTT-TTGT-TCC-AA----G-TCGGTT-ATTTAT---GGAACAT-CCAGTT-----AGAGATCCACGGATCAAG----------AGGATTATAACCA-ATGAA-ACATAAAGGA-------------------------------------------------------CCAT---CAAGC-------------------TAA----TTTGATTTTCC--AGTCAGTTGACCTAAC-CTCAT--AT-------GTTG-CTTTTGTTTTCTT-CAGGTCTTGTGCTCCAGAATGGCCGCTCGCCGTATCGCCCAATCCTCGATCAACTG
droBip1 scf7180000396395:482481-482730 - TAA-------G---TCGC--AGGAAAAATTACATAATTTTTGCAAGCATAACTTTT-AATGTT-TTGG-TCC-AA----A-TCGGAT-ATTTGT---GGCACAT-CCAGTT-----ATATATCCTCGGATCAAG----------AGGATTATAGCCA-ACGAA-ACATTATGGG-------------------------------------------------------CCAT---CGAAC-------------------TAC----TTTGATTTTCC--AATCAGTTGACCTAAC-CTCAT--AT-------GTTG-CTTTTGTTTTCTT-CAGGTCTTGTGCTCCAGAATGGCCGCTCGCCGCATCGCCCAATCCTCGATCAACTG
dp5 Unknown_group_439:5135-5390 - GCT-------G---CAG------CAAAATTACATAATTTTTGCACGCATAATTTTC-AGTGGA---AT-GG----------------------------AAACA-GCA------TAATATATAATGCAGAAGATGGGACTCTAA------------CATCACA-ATCCACAGGAAATAGATATATTTATGGAATCTCGTCTTGGCATTGC-----T---T------------------------------------------T----T-TCATT-TCC--ACTTTGAGAACCTAAC-CTCAT--CAGTTTTGTGTTT-TTGTTGGT-TTTTTCAGTATTTGTGCTACAGAATGGCCGCTCGCCGCATCACCCAATCCTCGATAAACTG
droPer2 scaffold_0:704224-704478 + GCT-------G---CA------ACAAAATTACATAATT-TTGCACGCATAATTTTC-AGTGGA---AT-GG----------------------------AAACA-GCA------TAATATATAATGCAGAAGATGGGACTCTAA------------CATCACA-ATCCACAGGAAATATATATATTTATGGAATCTCGTCTTGGCATTGC-----T---T------------------------------------------T----T-TCATT-TCC--ACTTTGAGAACCTAAC-CTCAT--CAGTTTTGTGTTT-TTGTTGGT-TTTTTCAGTATTTGTGCTACAGAATGGCCGCTCGCCGCATCACCCAATCCTCGATAAACTG
droWil2 scf2_1100000004943:2044500-2044537 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCCGCCCGCCGCGTAGCTCAATCTTCGATCAACTG
droVir3 scaffold_12822:33277-33522 + GA---------------------CAAAATTACATAATTATTGCAGAACAAATTTTC-AGTGCAAATTCTGAACTGGGAAG-T----TAGGTTGTA-----AAAA----------------------------------AAATCT------------GTATATA--C--------------------------------------------CTCATGATACTTAA-AAGCT-TTAAAAAAGTGCACCAAACTGGTGCATATATACCTCCT-----GTTGTG-ATGTAAAAAACTAAAACT-ACGGAA-------ACATATTTTTG-TACTTTTCAGCGTTTGAAAT-AATTATGGCAGCACGCCGCATCACTCAATCTTCGATCAACTG
droMoj3 scaffold_6540:32688876-32688914 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGCAGCACGCCGCATCGCTCAATCCTCGATTAACTG
droGri2 scaffold_15074:3702014-3702080 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT-TTTCTATTAATTTCTAGCAT--------AAAAATGGCCGCACGTCGAATTGCCGCATCTTCGATAAATTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACA-------G---CAGA-TTGAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCG-TAAT-GTC-GA----T-A------GTTTGTAACTAAAAAAAGCA------GAGGATACATTTCAACTAACGGGAATATCG------------CTGCACA-GC--------------------------------------------TCCAGAACACCAAG-AAAGC----------------------------ACTTACCACCT-----CTTTAG-ACCCACAAACCTAAC-CTCAT--CC-------GTTT-TTGTTGTTGTCTTGCAGTATCTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGTATCGCCCAATCCTCG........2813.00300300000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCCCAATCCTCGATCAACTG2112.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATCAACTG2811.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCCCAATCCTCGAT......1511.00100000001000000000
................................................TAACTCGC-CGTGCG-TAAT-GTC-...........................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGATCAAC..2711.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................GCCCAATCCTCGATCAACTG2011.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGCCGTAA.....................2511.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCGC..........................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................GTATCTGTG---CAGAATGGCC................................1911.00110000000000000000
.....................................................................GTC-GA----T-A------GTTTGTAACTAA................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCC............................2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCCGCC.........................2211.00100010000000000000
....................................................................................................................................................................................................................................................................TTACCACCT-----CTTTAG-ACCCA......................................................................................................2011.00100001000000000000
.............................................GCATAACTCGC-CGTGCG-TAAT-...............................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
............................................AGCATAACTCGC-CGTGCG-TAA.................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCGCCGTA......................2611.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................GTTGTCTTGCAGTATCTG...............................................1811.00110000000000000000
..............................................................................................................................................CG------------CTGCACA-GC--------------------------------------------TCCAGAACACCAAG-AA.................................................................................................................................................................2711.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCAACT.2411.00100000000000100000
.............................................................................................................................................................................................................................................................................................................T--CC-------GTTT-TTGTTGTTGTC...........................................................1811.00100000000001000000
..................................................................................................................................................................................................................TCCAGAACACCAAG-AAAG...............................................................................................................................................................1811.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CCAATCCTCGATCAACTG1811.00100100000000000000
droSec2
ATT-------G---AAGA-TTGAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCG-TTAT-GTC-GA----T-A------ATCTGTAACTAAAAAA-GCA------GAGGTTACATTTCAACTAATGTGAATATCG------------CTGCACA-GC--------------------------------------------TCCAGAACACCAAG-AAACC----------------------------ACTTACCACCT-----CTTTAA-ACCCAAAAACCTAAC-CTCAT--CC-------GTTT-TTGTTGTTGTCTTGCAGTATTTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................TTGTG---CAGAATGGCCGCCCGCC.........................2212.0020020
..............................................................................................................................................................................................................................................................................................................................................GTATTTGTG---CAGAATGGCCGC..............................2111.0010001
..................................................................................................................................................................................................................................................................................................................................TGTTGTCTTGCAGTATTTGTG---..........................................2111.0011000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTC.........2011.0010010
...................................................................T-GTC-GA----T-A------ATCTGTAACTAA................................................................................................................................................................................................................................................................................................2011.0011000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGCC.........................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................AGAATGGCCGCCCGCCGTATCGCCC................2511.0011000
...............................................................................................................................................................................................................................................................................................................................................TATTTGTG---CAGAATGGCCGCCCGCCGT.......................2711.0011000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCC............................1811.0010010
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATCAACT.2711.0011000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGAT......1911.0011000
.................................................................................................................................................................................................................................................................................................................................................TTTGTG---CAGAATGGCCGCCC............................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................TATTTGTG---CAGAATGGCCGCCC............................2211.0010010
...............................................................................................................................................................................................................................................................................................................................................TATTTGTG---CAGAATGGCCGCCCG...........................2311.0010010
................................................................................................................................................................................................................................................................................................................................................ATTTGTG---CAGAATGGCCGCCCGCCGT.......................2611.0010010
...........................................................................................................................................................................................................................................................................................................................................................AGAATGGCCGCCCGCCGT.......................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................TTTGTG---CAGAATGGCCGCCCGC..........................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................ATCGCCCAATCCTCGATCAAC..2111.0010010
dm3
ATT-------G---AGGATTGAAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCA-TTAT-GTC-GA----TAA------GTCTGCAACTAAAGAA-GCA------GAGATTACATTTCAACTAATAAGAATATCG------------CTGCACA-GT--------------------------------------------TCCAGGACACCTAG-AAATC----------------------------ACTTACCACCT-----CTATAA-ACCCAAAAACCTAAC-CTCATCCCC-------GCTT-TTGTTGTTGTCTTGCAGTATCTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................ATCTGTG---CAGAATGGCCGCCC............................2119.0090000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000400004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCC............................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCC............................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGAT......1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CCGCCGTATCGCCCAATCCTC.........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCC.............................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGTATCGCCCA...............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ATCGCCCAATCCTCGATCA....1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATC.....2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCA....2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCC............................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGC..............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTC.........2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCCCGCCGTATCGCCC................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TG---CAGAATGGCCGCCCGCC.........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCTGTG---CAGAATGGCCGCC.............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCGCCCAATCCTCGATCA....1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCCCGCCGTATCGCCCA...............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGATCA....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGCCC............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCAACTG2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGCCGTA......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCC...........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCCCAATCCTCGATCAACT.2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CCGTATCGCCCAATCCTCGATCA....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CCGTATCGCCCAATCCTCGATC.....2212.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATCA....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTC.........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GCCCAATCCTCGATCAACT.1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCT..........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCT..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGTATCGCCCAATCCTCGATCA....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATTACATTTCAACTAATAAG...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CCC-------GCTT-TTGTTGTTGTCTTGCA......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................................................................................................................................................................................................................................................................................GTCTTGCAGTATCTGTG---CAGA......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCGCCCAATCCTCGATCAACTG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CAACTAAAGAA-GCA------GAGAC.............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GCCCAATCCTCGATCAACTG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CC-------GCTT-TTGTTGTTGTCTTGCAG.....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................TTACATAATTTTTGCGAGCATA..................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTAT-GTC-GA----TAA------GTCTGCAACTA.................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CGCCCGCCGTATCGCCCAATCC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTT-TTGTTGTTGTCTTGCAGTA...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCCGCC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGC..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCAAC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCC................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCTGTG---CAGAATGGCCGCCCGCCG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................CTAATAAGAATATCG------------CTGCAC..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................C-------GCTT-TTGTTGTTGTCTTGCAG.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCCCGCCGTATCGCCCAAT.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGCC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGTATCGCC.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCCCC-------GCTT-TTGTTGTTGT............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCGCC.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................AAC-CTCATCCCC-------GCTT-TTGTTG................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................AACTAAAGAA-GCA------GAGAT.............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCAA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGCCCGCC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCCGCCGTATC....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TATCGCCCAATCCTCGATCA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TATCGCCCAATCCTCGATCAACT.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCGCCG........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TCCAGGACACCTAG-AAAT...............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TG---CAGAATGGCCGCCCGCCG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAC-CTCATCCCC-------GCTT-TTGTTGTTG.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GTG---CAGAATGGCCGCCCGC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CCC-------GCTT-TTGTTGTTGTCTTG........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CTCATCCCC-------GCTT-TTGTTGTTGTC...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCCGCCCGCCGTATCGCCCAATC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................G---CAGAATGGCCGCCCGCCGTATC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGTATCGCCCAATCCTCG........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCGCCGTA......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGCCCGC..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TT-TTGTTGTTGTCTTGCAGTA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GCCCGCCGTATCGCCCAATCCTCGAT......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCGCCCAATCCTCGATCAAC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGCCCGCCG........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGCCCGCCGTA......................2811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCCGCCCGCCGTATCGC..................2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GAATGGCCGCCCGCCGTATCGCCCAA..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGTATCGCCC................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCC.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCCGCCCGCCGTATCGCC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGTATCGCCCAATCCTCGATC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CAGAATGGCCGCCCGCCGTA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCCCGCCGTATCGCCCA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCCGCCCGCCGTATCGCCCA...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCGCCCAATCCTCGATCAA...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CCCAAAAACCTAAC-CTCA.......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TATAA-ACCCAAAAACCTAAC-CTCATC.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGATCAAC..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATAATTTTTGCGAGCATAACTCG.............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCAACT.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAAATTACATAATTTTTG..........................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACT-------G---CGGA-TAGAAAAAATTACATAATTTTTGCGAGCATAACTCGC-CGTGCG-TTAT-GCC-GA----T-T------CTCTATTTCTAAGGAA-ACA------GAGATTACATTTCAACTAATGAGAACATCG------------AGGCACA-GC--------------------------------------------TCCAGAACACATAA-AAATC----------------------------CCTTCCCACCT-----TTATAA-GCCCAAAAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTGTCTTGCAGTATTTGTG---CAGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATC.....2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................TATTTGTG---CAGAATGGCCGCC.............................2111.0010100000
....................................................................................................................................................................................................................................................................................................................................................GTG---CAGAATGGCCGCCCGCCGT.......................2211.0010001000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCCCGCCGTATCGCCCAAT.............2411.0011000000
................................................................................................................................................................................................................................................................................................................................................ATTTGTG---CAGAATGGCCGCCCGCCGT.......................2611.0010000010
............................................................................................................................................................................................................................................................................................................................................................................TATCGCCCAATCCTCGATC.....1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................GTG---CAGAATGGCCGCCCGCCGTATCGCCC................2911.0010100000
................................................................................................................................................................................................................................................................................................................................................................................GCCCAATCCTCGATCAACT.1911.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................ATCGCCCAATCCTCGATCAACTG2311.0010000100
....................................................................................................................................................................................................................................................................................................................................................GTG---CAGAATGGCCGCCCGCC.........................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................CCCGCCGTATCGCCCAATCCTCG........2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................CGTATCGCCCAATCCTCGATCAACTG2611.0010100000
..................................................................................................................................................................................................................................................................................................................................TGTTGTCTTGCAGTATTTGTG---..........................................2111.0010000010
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATCAACTG2811.0011000000
................................................................................................................................................................................................................................................................................................................................................ATTTGTG---CAGAATGGCCGCCCC...........................2211.0010001000
droYak3
ATT-------G---CGGA-TAGAAAAAATTACATAATATTTGCGAGCATAACTCGC-CGTGCG-TTAT-GCC-AA----T-T------GTCTATTATTAAAGAA-CCAGA------GATTACATTTCAACTAACGAGAAAATCG------------AGGCACA-GC--------------------------------------------TGCAGAACACCTAA-AAGCC----------------------------CCGTACCACCT-----TTATAA-GCCCAATAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTGTCTTGCAGTATCTGTG---CAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCCGCCGCAT.....................26213.5027000000000027
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCATCGCCCAATCCTCGATCAAC..2720.50101000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCATCGCCCAATCCTCGATCAACT.2520.50101000000000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGCATCGCCCAATCC...........2520.50101000000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCC............................2020.50110000000000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCCGCCCGCCGCATCGCCCAAT.............2620.50101000000000
................................................................................................................................................................................................................................................................................................................................................ATCTGTG---CAGAATGGCCGCCCG...........................2220.50100100000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCATCGCCCAATCCTCGATCAACTG2920.50101000000000
................................................................................................................................................................................................................................................................................................................................................................................GCCCAATCCTCGATCAACTG2020.50101000000000
.........................................................................................................................................................................................................................................................................................................................................................................CCGCATCGCCCAATCCTCGAT......2120.50101000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCATCGCCCAATCCTCGATC.....2120.50100000100000
.........................................................................................................................................................................................................................................................................................................................................................................CCGCATCGCCCAATCCTCGATCA....2320.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................GCCCGCCGCATCGCCCAATCCTC.........2320.50101000000000
..........................................................................................................................................................................................................................................................................................................................................................CAGAATGGCCGCCCGCCGCATCGCC.................2520.50101000000000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCCGCCCGCCGCATCGCCCA...............2420.50101000000000
...............................................................................................................................................G------------AGGCACA-GC--------------------------------------------TGCAGAACAC........................................................................................................................................................................2020.50101000000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGCCGCA......................2420.50101000000000
....................................................................................................................................................................................................................................................................................................................................................GTG---CAGAATGGCCGCCCGCCGCATC....................2520.50100100000000
.......................................................................................................................................AGAAAATCG------------AGGCACA-GC--------------------------------------------..................................................................................................................................................................................1820.50100100000000
...................................................................................................................................................................................................................................................................................................................................................TGTG---CAGAATGGCCGCCCGCCGCAT.....................2520.50101000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCCGCCGC.......................2420.50100000010000
........................................................................................................................................................................................................................................................................................................................................................................GCCGCATCGCCCAATCCTCGAT......2220.50101000000000
.....................................................................................................................ATTACATTTCAACTAACGAGAAAATC.....................................................................................................................................................................................................................................................2620.50101000000000
.....................................................................................................................................................................................................................................................................................................................................................................CCCGCCGCATCGCCCAATCCTC.........2220.50101000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCCGCCCGC..........................2420.50101000000000
...............................................................................................................................................................................................................................................................................................................................................TATCTGTG---CAGAATGGCC................................1820.50100100000000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGCATCGCCCA...............2120.50101000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCC............................1920.50100001000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCATCGCCCAATCCTCGATCAA...2620.50101000000000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCCCGCCGCATCGCCCAATCCTCGAC......2920.50100100000000
............................................................................................................................................................................................................................................................................................................................................................GAATGGCCGCCCGCCGCATCGCC.................2320.50101000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTG---CAGAATGGCCGCCCGCCGCAC.....................2620.50100100000000
.................................................................................................................................................................................................................................................................................................................................................TCTGTG---CAGAATGGCCGCCCGC..........................2220.50110000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGCATCGCCCAATCCTCGATCAAC..2620.50101000000000
......................................................................................................................TTACATTTCAACTAACGAA...........................................................................................................................................................................................................................................................1930.33100010000000
droEug1
ACT-------G---CGGT-T-AAAAAAATTACATAATTTTTGCAGGCATAACTTCCCCGTGTT-TAAT-GGC-TA----G-G------GAATATAC-TTAAGAA-CCATTGATT--ATCACTAAGTTAACTAAG----------C--ATATTATCTAGACAGA-GTAGAA-----------------------GCAAG-----------------T---CCTAGAAAAAC----------------------------ATTTA----AATTATT-TC-----CCGTACAACCTAAC-CTCAT--CA-------GCTT-TTGTTGTTGTCTTTCAGTATTTGTG---AAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATTAACTGSizeHit CountTotal NormTotal
No Reads
droBia1
ACT-------G---CGGT-TAAGAAAAATTACATAATTTTTGCGAGCATATTTTTC-CTTGTG-TTAT-GAA-TA----G-G------GATTATGT-CAAGGAG-CCAGTG-----ATTGCCACTTAAACTAGA----------C--ACCTAATTCCAACCAA-GTTCAAGGGAAA-----------------------------------------------------CTCCTAAAGAGC-------------------TTG----T-CCACTTTCTTC-CACCGAGAACCTAAC-CTCAT--CC-------GTTG-TTGTTGTTGTCTTCCAGTTCCTGTG---CAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotal
No Reads
droTak1
ACT-------G---CGGT-TAAGAAAAATTACATAATTTTTGCAGGCATAATTTTC-CGTGTG-TTAT-GCC-AG----G-G------GAAAATAG-CAAAGAA-CCATCGAT-----TGTTGAATAATCCAGG----------C--ACCCTAACTAAACCAA-GTGCAGGGGAAA-----------------------------------------------------CTTTCAATAAGC-------------------TCT----A-CCAATTTCTGC-CACCAAAAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTTTCTTCCAGTTCTTGTG---CAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGGTTAACTGSizeHit CountTotal NormTotal
No Reads
droEle1
ACT-------G---CTGA-TGTTAAAAATTACATAATTTTTGCAGGCATAATTTTC-CGTATG-TTAT-GCC-AA----G-T------GTTTGCAG-GAAAGAA-GCGCTG------ACCAATCATAAAC---------CCTATC--ATTCCAATTA-AGCAA-ACCCAAAAGAAA-----------------------------------------------------CCCGCTTGCAAC-------------------TTC----TACCATTTTCT--GCTGCGACAACCTAAC-CTCAT--CC-------GCTT-TTGTTGTTGTTTTCCAGTATTTGTGCTGCAGAATGGCCGCCCGCCGCATCGCCAAATCCTCGGTTAACTGSizeHit CountTotal NormTotal
No Reads
droRho1
TCGTCAAACTGCTGCGGT-T--AAAAAATTACATAATTTTTGCAGGCATAATTTTC-CGTGTG-CTAT-GCC-AA----G-T------GTCTGTAG-AAAAGAA-CCAATG-----GACTAAACTTAAATTAGG----------C--ATACTAGTTA-ACGAA-ACCCAAAGAAAA-----------------------------------------------------CCCTCCTGCAAT-------------------TAT----AACAAATTTTT--GCCTCGACAACCTAAC-CTCAT--CC-------GATT-TTGTTGTTGTTTTCCAGTATTTGTGCTGCAGAATGGCCGCCCGCCGCATCGCCAAATCCTCGATTAACTGSizeHit CountTotal NormTotal
No Reads
droFic1
GCA-------G---CGGA---AAAAAAATTACATAATTTTGGCACGCATAATTTTT-CGAGTG-TTAT-GCC-AA----A-T------GTTTTTACTGAAAAAAACAACT------GAATAGACTTAAGCTAAG----------C--ACAATAGTTATGCA-A-ACTTAAA----------------------------------ATCGC-----T---T-----------CTTTTAAAAC-------------------AGA----CACTATT-TCC--CCCTTGACAACCTAAC-CTCAT--CCATTC---GCTT-TTGTTGTTGTTTTCCAGCGCTAGTGGTTCAGAATGGCTGCCCGCCGCATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotal
No Reads
droKik1
GCG-------G---CAGGCCAAAAAAAATTACATAATTTTTGCAGGCATAATTTTC-CCTACGACTGC-GCC-TG----G-T----TACTTT-------GAGAA-CCACTCAC---GATTTAATGCAAACCAAG----------C--ATTA-AATTAAGCA-GCGATTGAG----------------------------------ACCACTCCAGTTCCCGAAG-G-------------GT-------------------TCC----CTTTATTTTCT---CATAACAAACCTAAC-CTCATACCC-------GTTT-TTGTTGTTGTTTCACAGCTCTTGTGCTGCAGAATGGCCGCCCGCCGCATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotal
No Reads
droAna3
GAA-------G---CCGA-AGAAAAAAATTACATAATTTTTGCAAGCATAACTTCT-GCTGTT-TTGT-TCC-AA----G-TCGGTT-ATTTAT---GGAACAT-CCAGTT-----AGAGATCCACGGATCAAG----------AGGATTATAACCA-ATGAA-ACATAAAGGA-------------------------------------------------------CCAT---CAAGC-------------------TAA----TTTGATTTTCC--AGTCAGTTGACCTAAC-CTCAT--AT-------GTTG-CTTTTGTTTTCTT-CAGGTCTTGTGCTCCAGAATGGCCGCTCGCCGTATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTC.........2014.004030001
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATGGCC................................2113.003020010
................................................................................................................................................................................................................................................................................................................................................................GGCCGCTCGCCGTATCGCCCA...............2112.002200000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCTCGCCGTATCGCCC................2012.002200000
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATGGCCGCTC............................2512.002000002
......................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATGGCCGCTCGCC.........................2112.002110000
.................................................................................................................................................................................................................................................................................................................................................CTTGTGCTCCAGAATGGCCGCT.............................2212.002020000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCTCGCCGTATCGCCCA...............2012.002200000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCTCGCCGTATCGCC.................2012.002200000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCTCGCCGTATCGCCCA...............2212.002200000
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATGGC.................................2012.002110000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCTCGCCGTATCGCCCAATCCTC.........2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCCGCTCGCCGTATCGCCCA...............2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................CGCCCAATCCTCGATCAACTG2111.001100000
......................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATGGCCGCTCGC..........................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCG........2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGATC.....2411.001010000
.........................................................................................................................................................................................................................................................................................................................................................CCAGAATGGCCGCTCGCCGTA......................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................GCCGTATCGCCCAATCCTCGATCA....2411.001100000
................................................................................................................................................................................................................................................................................................................................................TCTTGTGCTCCAGAATGGCCGCC.............................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................................CCGTATCGCCCAATCCTCGATCAACT.2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCTCGCCGTATCGCCCAATCCT..........2511.001100000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATC.....2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCTCGCCGTATCGCCCAATCCTCG........2711.001100000
.................................................................................................................................................................................................................................................................................................................................................CTTGTGCTCCAGAATGGCCGCTC............................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................GCTCGCCGTATCGCCCAATCCTCGATCA....2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................GCTCGCCGTATCGCCCAATCCTCGAT......2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................CTCGCCGTATCGCCCAATC............1911.001000001
................................................................................................................................................................................................................................................................................................................................................................................GCCCAATCCTCGATCAACC.1911.001010000
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATGGCCGC..............................2311.001010000
................................................................................................................................................................................................................................................................................................................................................................GGCCGCTCGCCGTATCGCCCAATCCTCG........2811.001100000
........................................................................................................................................................................................................................................................................................................................................................TCCAGAATGGCCGCTCGCCGT.......................2111.001001000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCTCGCCGTATCGCCCAATCCTCGA.......2811.001100000
.......................................................................................................................................................................................................................................................................................................................................................CTCCAGAATGGCCGCTCGCCG........................2111.001010000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCG........2111.001000010
...................................................................................................................................................................................................................................................................................................................................................TGTGCTCCAGAATGGCCGCTCGCCGT.......................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGAT......2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCTCGCCGTATCGCCCAATC............2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................GTATCGCCCAATCCTCGATCA....2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................TGCTCCAGAATGGCCGCTC............................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................CCGCTCGCCGTATCGCCCAATCC...........2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................TATCGCCCAATCCTCGATCAAC..2211.001100000
......................................................................................................................................................................................................................................................................................................................................................................TCGCCGTATCGCCCAATCCTCGATCAAC..2811.001100000
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATGGCCGCC.............................2411.001010000
......................................................................................................................................................................................................................................................................................................................................................................TCGCCGTATCGCCCAATCCTCGATCA....2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................CCAGAATGGCCGCTCGCCGTAT.....................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................TGTGCTCCAGAATGGCCGCTCGCC.........................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATG...................................1811.001001000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCTCGA.......2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................CGCCCAATCCTCGATCAAC..1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................GCCGCTCGCCGTATCGCCC................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTATCGCCCAATCCT..........1911.001010000
.................................................................................................................................................................................................................................................................................................................................................CTTGTGCTCCAGAATGGC.................................1811.001010000
..........................................................................................................................................................................................................................................................................................................................................................CAGAATGGCCGCTCGCCGTATCGCCC................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................GTCTTGTGCTCCAGAATGGCCGCT.............................2411.001010000
droBip1
TAA-------G---TCGC--AGGAAAAATTACATAATTTTTGCAAGCATAACTTTT-AATGTT-TTGG-TCC-AA----A-TCGGAT-ATTTGT---GGCACAT-CCAGTT-----ATATATCCTCGGATCAAG----------AGGATTATAGCCA-ACGAA-ACATTATGGG-------------------------------------------------------CCAT---CGAAC-------------------TAC----TTTGATTTTCC--AATCAGTTGACCTAAC-CTCAT--AT-------GTTG-CTTTTGTTTTCTT-CAGGTCTTGTGCTCCAGAATGGCCGCTCGCCGCATCGCCCAATCCTCGATCAACTGSizeHit CountTotal NormTotal
No Reads
dp5
GCT-------G---CAG------CAAAATTACATAATTTTTGCACGCATAATTTTC-AGTGGA---AT-GG----------------------------AAACA-GCA------TAATATATAATGCAGAAGATGGGACTCTAA------------CATCACA-ATCCACAGGAAATAGATATATTTATGGAATCTCGTCTTGGCATTGC-----T---T------------------------------------------T----T-TCATT-TCC--ACTTTGAGAACCTAAC-CTCAT--CAGTTTTGTGTTT-TTGTTGGT-TTTTTCAGTATTTGTGCTACAGAATGGCCGCTCGCCGCATCACCCAATCCTCGATAAACTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................ATCACCCAATCCTCGATAAACTG2312.0020110000000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCTCGCCGCATCACCCAATCC...........2612.0020200000000
................................................................................................................................................................................................................................................................................................................................................ATTTGTGCTACAGAATGGCCGCTC............................2412.0020101000000
...............................................................................................................................................................................................................................................................................................................................................TATTTGTGCTACAGAATGGCCGCTCGC..........................2711.0010000001000
................................................................................................................................................................................................................................................................................................................................................ATTTGTGCTACAGAATGGCCGCTCGC..........................2611.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................TGCTACAGAATGGCCGCTCGCCG........................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCCGCTCGCCGCATC....................1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................TTTGTGCTACAGAATGGCCGCTCGCCGCA......................2911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................TACAGAATGGCCGCTCGCC.........................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................GTGCTACAGAATGGCCGCTCGCCGCA......................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................CTACAGAATGGCCGCTCGC..........................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................GAATGGCCGCTCGCCGCATC....................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................TTGTGCTACAGAATGGCCGCTC............................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................GCATCACCCAATCCTCGATAA....2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCCGCTCGCCGCATC....................1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................TGTGCTACAGAATGGCCGCTCGC..........................2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................TATTTGTGCTACAGAATGGCCGCTC............................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGCATCACCCAATCCTCG........2011.0010100000000
...............................................ATAATTTTC-AGTGGA---AT-G..............................................................................................................................................................................................................................................................................................................................1811.0010000100000
.................................................................................................................................................................................................................................................................................................................................................TTTGTGCTACAGAATGGCCGCTCGC..........................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GCCGCATCACCCAATCCTCGATA.....2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................CACCCAATCCTCGATAAACT.2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................TGCTACAGAATGGCCGCTCGCC.........................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................ATCACCCAATCCTCGATAAACT.2211.0010100000000
droPer2
GCT-------G---CA------ACAAAATTACATAATT-TTGCACGCATAATTTTC-AGTGGA---AT-GG----------------------------AAACA-GCA------TAATATATAATGCAGAAGATGGGACTCTAA------------CATCACA-ATCCACAGGAAATATATATATTTATGGAATCTCGTCTTGGCATTGC-----T---T------------------------------------------T----T-TCATT-TCC--ACTTTGAGAACCTAAC-CTCAT--CAGTTTTGTGTTT-TTGTTGGT-TTTTTCAGTATTTGTGCTACAGAATGGCCGCTCGCCGCATCACCCAATCCTCGATAAACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................CACCCAATCCTCGATAAACTG2112.002200000
..........................................................................................................................................................................................................................................................................................................................................................................CGCATCACCCAATCCTCGATAAACTG2612.002200000
...............................................................................................................................................................................................................................................................................................................................................................................CACCCAATCCTCGATAAACT.2011.001001000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCCGCTCGCCGCATCACC.................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................GAATGGCCGCTCGCCGCATCA...................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................TGCTACAGAATGGCCGCTCGCCGCA......................2511.001010000
droWil2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCCGCCCGCCGCGTAGCTCAATCTTCGATCAACTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................AGCTCAATCTTCGATCAACT.2013.00300021
........................................................................................................................................................................................................................................................................................................................................................................GCCGCGTAGCTCAATCTTCGAT......2212.00202000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCGTAGCTCAATCTTCGATCAAC..2711.00101000
.................................................................................................................................................................................................................................................................................................................................................................................CTCAATCTTCGATCAACT.1811.00100010
................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCGCCGCGTAGCTC................2011.00110000
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCCCGCCGCGTAGCTCAATCT...........2611.00101000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCGTAGCTCAATCTT..........1911.00100010
...............................................................................................................................................................................................................................................................................................................................................................TGGCCGCCCGCCGCGTAGCTC................2111.00110000
...............................................................................................................................................................................................................................................................................................................................................................................AGCTCAATCTTCGATCAACTG2111.00101000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCCGCCCGCCGCGTAGCTCAATC............2611.00110000
.................................................................................................................................................................................................................................................................................................................................................................................CTCAATCTTCGATCAACTG1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................GTAGCTCAATCTTCGATCAACT.2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................ATGGCCGCCCGCCGCGTAGCTCA...............2311.00101000
..............................................................................................................................................................................................................................................................................................................................................................................TAGCTCAATCTTCGATCAAC..2011.00101000
..........................................................................................................................................................................................................................................................................................................................................................................CGCGTAGCTCAATCTTCG........1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCGTAGCTCAATCTTCGAT......2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................................CGCGTAGCTCAATCTTCGATCAA...2311.00100100
droVir3
GA---------------------CAAAATTACATAATTATTGCAGAACAAATTTTC-AGTGCAAATTCTGAACTGGGAAG-T----TAGGTTGTA-----AAAA----------------------------------AAATCT------------GTATATA--C--------------------------------------------CTCATGATACTTAA-AAGCT-TTAAAAAAGTGCACCAAACTGGTGCATATATACCTCCT-----GTTGTG-ATGTAAAAAACTAAAACT-ACGGAA-------ACATATTTTTG-TACTTTTCAGCGTTTGAAAT-AATTATGGCAGCACGCCGCATCACTCAATCTTCGATCAACTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................GTGCAAATTCTGAACTGGGAA.....................................................................................................................................................................................................................................................................................................................21110.0010000000000100000004100000000000000000000000000000000000000003010
.............................................................................................................................................................................................................................................................................................................................................................................ATCACTCAATCTTCGATCAACT.2217.007000100000000002101000000000001010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCATCACTCAATCTTCGATCAACT.2415.005002100000000000101000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AAT-AATTATGGCAGCACGC..........................1914.004000004000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCATCACTCAATCTTCGAT......1913.003001100000000000000000000000001000000000000000000000000000000000
..........................................................GTGCAAATTCTGAACTGGGA......................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000002000
..............................................................................................................................................................................................................................................................................................................................................................................TCACTCAATCTTCGATCAACT.2112.002002000000000000000000000000000000000000000000000000000000000000
.........................................................AGTGCAAATTCTGAACTGGGAA.....................................................................................................................................................................................................................................................................................................................2212.002000000000200000000000000000000000000000000000000000000000000000
.........................................................AGTGCAAATTCTGAACTGGGA......................................................................................................................................................................................................................................................................................................................2112.002000000000000000001000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCATCACTCAATCTTCGATCAACTG2512.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACGCCGCATCACTCAATCTTCGATC.....2512.002000000000000000001010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTGAAAT-AATTATGGCAGCACGC..........................2312.002001000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AATTATGGCAGCACGCCGCATC....................2212.002001000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GTTTGAAAT-AATTATGGCAGCACGCC.........................2611.001000100000000000000000000000000000000000000000000000000000000000
..................................................................TCTGAACTGGGAAG-T----TAGGTTGTA-----AAAA----------------------------------..........................................................................................................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CACGCCGCATCACTCAATCTTC.........2211.001000000000000000000000000000000000000100000000000000000000000000
.........................................................AGTGCAAATTCTGAACTGGGAAG-T----..............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................GTTTGAAAT-AATTATGGCAGCACG...........................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................GCAAATTCTGAACTGGGAA.....................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..................................AATTATTGCAGAACAAATTTTC-AGT........................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TATATACCTCCT-----GTTGTG-ATG........................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ATCACTCAATCTTCGATCAACTG2311.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCATCACTCAATCTTCGAT......2011.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TTTG-TACTTTTCAGCGTTTGAAAT-AATTA.....................................2911.001000000000000000000000000001000000000000000000000000000000000000
....................................................TTTC-AGTGCAAATTCTGAACTGGGA......................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ATTATGGCAGCACGCCGCA......................1911.001000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AAT-AATTATGGCAGCACGCCGCA......................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGCACGCCGCATCACTCAATC............2111.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CATCACTCAATCTTCGATCAACT.2311.001000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGCGTTTGAAAT-AATTATGGCA................................2211.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCACTCAATCTTCGATCAACTG2211.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GAAAT-AATTATGGCAGCACGCC.........................2211.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CACTCAATCTTCGATCAACTG2111.001000000000000000000000000000000100000000000000000000000000000000
....................................................................TGAACTGGGAAG-T----TAGCG.........................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TATGGCAGCACGCCGCATCACTCAATC............2711.001000000000000000000000000000010000000000000000000000000000000000
............................................................GCAAATTCTGAACTGGGA......................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................TA--C--------------------------------------------CTCATGATACTTAA-AAGCT-T............................................................................................................................................................2311.001000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCATCACTCAATCTTCGATCAACTG2611.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCACTCAATCTTCGATCAAC..2011.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TCATGATACTTAA-AAGCT-TTA..........................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AATTATGGCAGCACGCCGCATCAC..................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ACTCAATCTTCGATCAACT.1911.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAAAT-AATTATGGCAGCACGCCGCA......................2611.001000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TTTGAAAT-AATTATGGCAGCACGCC.........................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAAAT-AATTATGGCAGCACGCCGC.......................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCATCACTCAATCTTCGATCAACT.2511.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TAAAAAACTAAAACT-ACGGAA-------ACATA......................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGCGTTTGAAAT-AATTATGGC.................................2111.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GTTTGAAAT-AATTATGGC.................................1811.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAAAT-AATTATGGCAGCACGCC.........................2311.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCACTCAATCTTCGATCAA...1911.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCAGCACGCCGCATCACTCAAT.............2511.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGCAGCACGCCGCATCGCTCAATCCTCGATTAACTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................TGGCAGCACGCCGCATCGCTC................2112.002200000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCAGCACGCCGCATCGCTCAATCCTC.........2911.001100000
...............................................................................................................................................................................................................................................................................................................................................................TGGCAGCACGCCGCATCGCT.................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCAGCACGCCGCATCGCTCAA..............2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGCATCGCTCAATCCTCGAT......2311.001100000
..............................................................................................................................................................................................................................................................................................................................................................ATGGCAGCACGCCGCATCGCTC................2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................AATGGCAGCACGCCGCATCGCT.................2211.001100000
droGri2
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT-TTTCTATTAATTTCTAGCAT--------AAAAATGGCCGCACGTCGAATTGCCGCATCTTCGATAAATTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................GCACGTCGAATTGCCGCA..............1811.00110
...........................................................................................................................................................................................................................................................................................................................................................AAAATGGCCGCACGTCGAATT....................2111.00110
.................................................................................................................................................................................................................................................................................................................................................T--------AAAAATGGCCGCACGTCGA.......................2011.00101
............................................................................................................................................................................................................................................................................................................................................................AAATGGCCGCACGTCGAATTGC..................2211.00110

Generated: 05/18/2015 at 09:48 PM