ID:

dsi_26598

 Coordinate:

2r:12553295-12553444 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.5 -22.4 -22.4

Flybase annnotation

five_prime_UTR [2r_12553288_12553294_-]; CDS [2r_12553129_12553287_-]; exon [2r_12553129_12553294_-]; intron [2r_12553295_12554495_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAACGTACTCGAAACCTATTGCACCTGCACACAGTCGCGCTCTAATCAATTCTAAGTAAATAAATCAAAGTTTGAAAGTACAGGCAAAGTCAAACGGTACGCGCGAGCACACGAGACCCTCCTTTATTTGTCTTTGAAAGAAGGCTATATTAAATCTTAATTGATTTGTTTCTTATGTTTTTTTTATAAATATTTTGTAGCTTCATCATGTCGGCGAAAGCAATCACCGAGGCCTCTGGCAAGGACATCC
**************************************************..((((.(((((((((((((((((((((((.(((....(((...((((..((....)))).)).)))...))).)))))((((((....))))))....))))).))...))))))))))))))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M053
female body
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
....GTACTCGAAACCTATTGCACCTGC.............................................................................................................................................................................................................................. 24 0 1 6.00 6 0 6 0 0 0 0 0
...........................................................................................................................................................................................................CATCATGTCGGCGAAAGCAATCAC....................... 24 0 1 2.00 2 0 2 0 0 0 0 0
...CGTACTCGAAACCTATTGCACCTG............................................................................................................................................................................................................................... 24 0 1 2.00 2 1 0 0 1 0 0 0
.................ATTGCACCTGCACACAGTCGCGCT................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................TAAGTAAATAAATTAAAGTTTAA............................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0
..............................ACAGTCGCGCTCTAATCAATT....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................GCACACAGTCGCGCTCTAATCAATTCTAA................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................GATCAAAGTTTGAAAGTACAGGC..................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................GTACAGGCAAAGTCAAACGCTT....................................................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................CGAGGCCTCTGGCAAGGAC.... 19 0 1 1.00 1 1 0 0 0 0 0 0
....GTACTCGAAACCTATTGCACCT................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................CACAGTCGCGCTCTAATC........................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................AATAAATCAAAGTTTGAAAGTACAGGC..................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TCATCATGTCGGCGAAAGC............................. 19 0 1 1.00 1 1 0 0 0 0 0 0
..ACGTACTCGAAACCTATTGCACCTGC.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................GAGGCCTCTGGCAAGGAC.... 18 0 1 1.00 1 0 0 1 0 0 0 0
..............................ACAGTCGCGCTCTAATCAATTCTAAGT................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
......ACTCGAAACCTATTGCACCTGCG............................................................................................................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................ATCGTGTCGGCGAAAGCA............................ 18 1 1 1.00 1 0 0 0 1 0 0 0
...CGTACTCGAAACCTATTGCACCTGC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAAGTTTGAAAGTACAGGC..................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
................TATTGCACCTGCACACAGTCGCGCT................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0
......................ACCTCCACACAATCGCGCTCA............................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 1 0
..................................................TCTAAGGAAATAAATTAGAGT................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................CGCGACCTCTGGCACGGAC.... 19 3 10 0.10 1 0 0 0 0 0 1 0
......ACTCGAAACCTAGTGA.................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

TTTGCATGAGCTTTGGATAACGTGGACGTGTGTCAGCGCGAGATTAGTTAAGATTCATTTATTTAGTTTCAAACTTTCATGTCCGTTTCAGTTTGCCATGCGCGCTCGTGTGCTCTGGGAGGAAATAAACAGAAACTTTCTTCCGATATAATTTAGAATTAACTAAACAAAGAATACAAAAAAAATATTTATAAAACATCGAAGTAGTACAGCCGCTTTCGTTAGTGGCTCCGGAGACCGTTCCTGTAGG
**************************************************..((((.(((((((((((((((((((((((.(((....(((...((((..((....)))).)).)))...))).)))))((((((....))))))....))))).))...))))))))))))))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
.....................GTGGACGTGTGTCAGCGC................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
.....................................GGGCGATTAGTTAAGATTCACT............................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................CGAAGTAGTACTGCCGCAT................................ 19 2 1 1.00 1 0 0 1 0 0
.........................................................................................................TAGTGTGTTGTGGGAGGAAATAA.......................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0
.................................................................................................................................................................................................................................TGGCTCCGGAGCCCG.......... 15 1 4 0.75 3 3 0 0 0 0
.....................GTGGACGAGTGTCAGCGCAC................................................................................................................................................................................................................. 20 3 4 0.25 1 1 0 0 0 0
........................................AGATTAGTTAAGGTGCAT................................................................................................................................................................................................ 18 2 7 0.14 1 0 0 0 0 1
............................................TAGTTAAGATACATTT.............................................................................................................................................................................................. 16 1 9 0.11 1 1 0 0 0 0
....................CACGGACGTGTGTCAGCTCG.................................................................................................................................................................................................................. 20 3 10 0.10 1 0 0 1 0 0
..................................AGGGCGAGGTTAGTTAAGAA.................................................................................................................................................................................................... 20 3 12 0.08 1 0 1 0 0 0
.........................................................................................................TCGTGTGCTTTGGGATGAG.............................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12553245-12553494 - dsi_26598 A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAGC-ACACGA--------------GA---CCCTCCTTTATTTGTCTTTGAAAGAAGGCTATATTAAATCTTAATTGATTTG------------------------------------------------------------------------------------TTTCTTATGTTTTTTTTATAA-----------------------------------------------------------------------ATATTT--------TGTAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCTGGCAAGGACATCC
droSec2 scaffold_1:9386392-9386640 - A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACACGA--------------GA---CCCTCCTTTATTTGTTCTTGAAAGAAGGCTGTATTAAATCTTAATTGATTTG------------------------------------------------------------------------------------TTTCTTATGTTTTT-TTATAT-----------------------------------------------------------------------ATATTT--------TGTAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCC
dm3 chr2R:11887426-11887695 - A--------AACTTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGTG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGA-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACACGA--------------GA---CCCTCCTTTATTTGTATTTGAAAGAAGGCTATATTAAATCTTAATTGATTTGTTTTTATATATTT-----------------------------------------------------------------TT-----------------------------------------------------------GTATTTTTGTT------T-TTTTGTTTTTTT----GTATATTC--------TGTAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCC
droEre2 scaffold_4845:13971820-13972052 + A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAT-ACACGA--------------GAG-ACCCTCCTTTATTTGTCTTTGAAG-AAGACC--ATTTAATCTTAATTGATTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----TTTATATTC--------TGCAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCC
droYak3 2R:17095229-17095473 + A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACATGA--------------GAG-ACCCTCCTTTATTTGTCTTTGAAA-AATGCC--ATTAAATCTTAATTGATTTGTTT------------------------------------------------------------------------------------------------TTATAT-----------------------------------------------------------------------ATATTTTTATATACTGCAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCC
droEug1 scf7180000409672:794290-794520 - A--------AACGAA---------------------CTCA-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT------AAAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACA--A--------------GA----CCTCCTTTATTCGTCTTTGAAG-AATGCT--ATAAAA-----------------------------------------------------------------------------------------------------------------------------------ATCTATAT----------------------TCCTTC----AATCT-----TTTATAA-------T--------TGCAGC----------------TCC-ATCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCC
droBia1 scf7180000302292:2063666-2063895 - A--------AGAGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCGATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-A--CGA--------------GA----CCTCCTCTATTCGTCTTTGAAA-AATGCTATA--ATA--TGAAC-----------------------------------------------------------------------------------------TAA--------------------------------------------------------------ACCGTC----GATCT-----TGTTCCA-------T--------TACAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACGGAGGCCACCGGCAAGGACATCC
droTak1 scf7180000415795:676824-677060 + A--------AACGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAGC-ACACGA--------------GAC-GACCTCCTCTATTTGTCTTTGATA-TTTGCC--CTGAAA-----------------------------------------------------------------------------------------------------------------------------------TTCTAG--------------------TAATTCCCCT----GATAT-----TGTCTTG-------T--------TACAGC----------------TTC-AACATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCC
droEle1 scf7180000491107:889318-889557 - A--------AGCGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACATATTCGACAT--ATTCGCCGC--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGT------------------------------TCCTCCTCTATTCGTCTTTGAGA-CTGTCTTTACTAGATCTTTAC-----------------------------------------------------------------------------------------CAGACTG----------------------------------------------------------TCCTCT----GATCT-----TG----C-------T--------TGCAGC----------------TCC-ATCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCC
droRho1 scf7180000779911:212912-213143 + A--------AGCGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACATA-----------------TT--------------CTCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGCAC-C--CGA--------------CA---ACCTCCTCTATTCGTCTTTCAAG-CTGGGT--TTCAAATCTTAAC-----------------------------------------------------------------------------------------TAG--------------------------------------AC----------------------TTCTCC----GATCT----CTT----C-------T--------TACAGC----------------TCC-ATCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCC
droFic1 scf7180000453948:1135204-1135438 - A--------AACAAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGTG--CTCTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAGCC--CGA--------------GA---GCCTCCTCTATTCGTCTTTGAAC-AAGGCT--TA--------------------------------------------------CGAA-------------------------------------------AACTAT--------------------------------------AT----------------------ATCTTTA-TTGATCT----CTGT---A-------T--------TACAGC----------------TCC-AACATGTCGGCGAAAGCAATCACGGAGGCCTCTGGCAAGGACATCC
droKik1 scf7180000302385:1115244-1115498 - CCCGACGCCAGCGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------ATA---G-CGC------GCG--CTCCCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGA-------------CAA------AGTCAAGCCACG-GTACGCGCGCAA-ATA-------------------------GCCTCTAAACGCCTTTGAAT------------AGATC------GCTT-------------------------------TA------------------------------------------C--------TTGACT-----------ATATAAATACCTATAAA-------------------------------ACCTCTGGTTAATCT-----------C-------T--------TGCAGC----------------TCC-AGAATGTCGGCGAAAGCAATTACGGAGGCCTCCGGCAAGGACATCC
droAna3 scaffold_13266:11838453-11838730 + A--------AACCAA---------------------GCCC-AAG-----------------------CCC-----ACTACCTACTGCACCTGTATACGCTCGA--------------A---G-CGCGCACTCGCT-TGTCTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACGCGTACGCGCCT----------------------G---GT----C-TATATA------------------------------------------------CATATTTCTCTCCCCACCGATTACCGAT------------------------------------CACTATATG---TATACT---------------------ATCAA--TCC----ATTAT------GTCGTATTGATGTC------T-C-CT----CTCT----CTAC---C--------TAGAGT----------------TTC-ACCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGTAAGGACATCC
droBip1 scf7180000396547:633080-633362 - A--------AGCCAA---------------------GCCCAAA-----------------------------------ACCTATTGCACCTGTATACGA----------------ATAGAAACCGCGCACTCGCT-TCTCTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACGCGTACGCGCTT----------------------G---GT----C-TATATATTTCGTTGCG---------------------------------------------------------ATTACTGATCACTATATGTACCTATCCCTCCCTGATATTTCTACCCCG----------------------------------CTATAAAATCTTAC--------------------TGATTTC------T-AT-T----CTTT----ATAT---G--------TAGAGT----------------TTC-ACCATGTCGGCGAAAGCAATTACGGAGGCCTCCGGTAAGGACATCC
dp5 3:18943738-18944023 + A--------CACACA---------------------CACA-CA------------------------CCGTCAGAAATACCTATTGCACTTGCACACTCAC-ACACAAACACTCT--A---A-CGGGCG---GCTCCGTCTCTAATCAATTCTAAGTAAATACTTGTAAAATCAAAGTTTGAAAGTACAGA-------------CAA-----AAGTCAA---ACG-GTACGG--------CACGACACGGGGTGGGGTGG-GGT----C-CATATTTGCCATTGAAT-----------------------------------------------------------TCCGAT------------------------------------CCATGCCTA---TATCCTATGTTTCT--------------------------------------------------------------CT----CTTT----CTACCCTT--------GACAGC----------------ATCTGGGATGTCGGCGAAAGCAATCACTGAAGCCACGGGCAAGGATATCC
droPer2 scaffold_34:894476-894761 + A--------CACACA---------------------CACA-CA------------------------CCGTCAGAAATACCTATTGCACTTGCACACTCAC-ACACAAACACTCT--A---A-CGGGCG---GCTCCGTCTCTAATCAATTCTAAGTAAATACTTGTAAAATCAAAGTTTGAAAGTACAGA-------------CAA-----AAGTCAA---ACG-GTACGG--------CACGACACGGGGTGGGGTGG-GGT----C-CATATTTGCCATTGAAT-----------------------------------------------------------TCCGAT------------------------------------CCATGCCTA---TATCCTATGTTTCT--------------------------------------------------------------CT----CTTT----CTACCCTT--------GACAGC----------------ATCTGGGATGTCGGCGAAAGCAATCACTGAAGCCACGGGCAAGGATATCC
droWil2 scf2_1100000004382:968161-968410 - T--------AACAAA---------------------CACA-CA------------------------CTT------GTACGCATTGCACTCGCAGTTG-----------------GC--------------AGCA---ACTAAAATCATTTCTAAGCGTCT----ATAGAATCAAAGTTTGAAAGTACAGA-------------CAA-GGGAAAGTCAA---ACG-GTACGATAAA-----------TGGGCTGGG---G-GGAACAT---ATTTTCTTCCTTGACA-ATAG---TACTAAATC--------------------------------------------------------------------------------------ATTTTAA---TGCTTTATTT---------------------------------------------------------------TATTC----CTT----TTTGTTTTT--------TATAGC----------------------CATGTCTGCCAAAGCCATCACAGAAGCCACTGGCAAGGACATTC
droVir3 scaffold_12875:17325113-17325346 - A--------GGCAGG-------------------TGCTCA-AAAGCTT---------------------------------GGCTGCACTCGCGC------------------------------------------GTCCCTAATCAATTCTAAGCAAAT------AGAATCAAAGTTTGAAAGTACGGG-------------CGAACCCAATGTCAA---GCG-AAACTTTTGAAT-ACAAGT--------------G---------------------------------------------------------------------------------------------------------------------------------TATAATAA---TAA-------------------------------TTT----GTCTTGGCAATATGCAAT--------TTG-TT-----------TACTCT-------T--------TACAGCAGAAGCCCCTCAAAAATAC-AGCATGTCTGCGAAAGCGATCACGGAAGCCACCGGCAAAGACATCC
droMoj3 scaffold_6496:10687104-10687150 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGCATGTCTGCGAAAGCGATCACGGAAGCCACCGGCAAGGACATCC
droGri2 scaffold_15245:16841077-16841327 - A--------AACAGACAACAATACACTAGGCAGGTGCTTG-AAGACTTTGTTGCATTTTCTTACACAC------AAATA-----TTCACACACACACA-----------------CA--------------TGTA----CACTAA-----------------------AATTCAAGGTTTAGAAGCACAGCGTTTTTTTTTATATAA-----GAATCAT---AC---------------------------------------------------------------------A--TTTAAAA-----------------------------------------------------------------------------------------------------------------------------------TTTGCGT--ATTAACAATGTGAATT--------TGA-TT-----------TTCCAT-------T--------TGCAGCACACCCCAAT-TTTAATAC-AGCATGTCTGCGAAAGCGATCACGGAAGCCACTGGCAAAGACCTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAGC-ACACGA--------------GA---CCCTCCTTTATTTGTCTTTGAAAGAAGGCTATATTAAATCTTAATTGATTTG------------------------------------------------------------------------------------TTTCTTATGTTTTTTTTATAA-----------------------------------------------------------------------ATATTT--------TGTAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCTGGCAAGGACATCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............GTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.00600600000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-ATCATGTCGGCGAAAGCAATCAC.......................2412.00200200000000000000
...........CGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00211000000000000000
..................................................................................ATTGCACCTGCACACA-----------------GT--------------CGCG----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...............................................................................................ACA-----------------GT--------------CGCG----CTCTAATCAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........................................................................................GCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCCTCTGGCAAGGAC....1911.00101000000000000000
............GTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..............................................................................................CACA-----------------GT--------------CGCG----CTCTAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..............................................................................................................................................................AAT-------AAATCAAAGTTTGAAAGTACAGG-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-ATCATGTCGGCGAAAGC.............................1911.00101000000000000000
..........ACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCTCTGGCAAGGAC....1811.00100010000000000000
...............................................................................................ACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..............A---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........CGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.............................................................................................................................................................................AAAGTTTGAAAGTACAGG-------------C.....................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................................TATTGCACCTGCACACA-----------------GT--------------CGCG----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
droSec2
A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACACGA--------------GA---CCCTCCTTTATTTGTTCTTGAAAGAAGGCTGTATTAAATCTTAATTGATTTG------------------------------------------------------------------------------------TTTCTTATGTTTTT-TTATAT-----------------------------------------------------------------------ATATTT--------TGTAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................ACCTATTGCACCTGCACACA-----------------GT--------------CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
............GTA---------------------CTCG-AA-----------------------------------ACCTATTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
....................................................................................................................................................................................................................................ACGCGCGAAC-ACACGA--------------GA---CCC.......................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................GTTTGAAAGTACAGG-------------CAA------AGTCAA---A...................................................................................................................................................................................................................................................................................................................................................................2511.0010010
................................................................................................................................................................T-------AAATCAAAGTTTGAAAGTACA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTTTT-TTATAT-----------------------------------------------------------------------ATATTT--------TGTAGC----------------..................................................2311.0010001
............GTA---------------------CTCG-AA-----------------------------------ACCTATTGCACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
dm3
A--------AACTTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGTG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGA-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACACGA--------------GA---CCCTCCTTTATTTGTATTTGAAAGAAGGCTATATTAAATCTTAATTGATTTGTTTTTATATATTT-----------------------------------------------------------------TT-----------------------------------------------------------GTATTTTTGTT------T-TTTTGTTTTTTT----GTATATTC--------TGTAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGTCGGCGAAAGCAATCACC......................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAGCAATCACCGAGGCCT...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TATTGCACCTGCACACA-----------------GT--------------CGTG----C......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGCGAAAGCAATCACCGAGGCA................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAATCACCGAGGCCTCC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................AA------AGTCAA---ACG-GTACGCGCGA......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................CCTATTGCACCTGCACACA-----------------GT--------------CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTCGGCGAAAGCAATCACCGAGGCC................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACCGAGGCCTCCGGCAAGGACATC.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGTCGGCGAAAGCAA...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................AA-----------------------------------ACCTATTGCACCTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGCCTCCGGCAAGGACA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ACAGA-------------CAA------AGTCAA---ACG-GTACGCG.........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GAAAGTACAGA-------------CAA------AGTC.........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGCCTCCGGCAAGGACATC.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............A---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CTGCACACA-----------------GT--------------CGTG----CTCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGCGAAAGCAATCACC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CAAAGTTTGAAAGTACAG....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................ACA-----------------GT--------------CGTG----CTCTAATCAATTCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................CTATTGCACCTGCACACA-----------------GT--------------CGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................GTCAA---ACG-GTACGCGCGAA.....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................A-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--------TGTAGC----------------TTC-ATCATGTCGG....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................AGTACAGA-------------CAA------AGTCAA---A...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAATCACCGAGGCCT...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........CTTA---------------------CTCG-AA-----------------------------------ACCTATTGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................A-------------CAA------AGTCAA---ACG-GTACGCGC........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGCGAAAGCAATCACCGAGGC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCACCTGCACACA-----------------GT--------------CGTG----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGTACAGA-------------CAA------AGTCAA---ACG-................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTT----GTATATTC--------TGTAGC----------------TTC-ATC...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCGAGGCCTCCGGA..........1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTT------T-TTTTGTTTTTTT----........................................................................................21160.4470000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTT------T-TTTTGTTTTTT.............................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTT------T-TTTTGTTTTTTC----........................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TT-----------------------------------------------------------------TT-----------------------------------------------------------GTATTTTTGTT------T-TTG.....................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTT------T-TTTTGTTTTTTT----........................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTT------T-TTTTGTTTT...............................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAT-ACACGA--------------GAG-ACCCTCCTTTATTTGTCTTTGAAG-AAGACC--ATTTAATCTTAATTGATTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----TTTATATTC--------TGCAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........CGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................ATCAAAGTTTGAAAGTACAGG-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------TTC-ATCATGTCGGCGAAAGCAATC.........................2511.0011000000
..............A---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-ATCATGTCGGCGAAAGC.............................1911.0010001000
........................................................................................................................................................................................GTACAGG-------------CAA------AGTCAA---ACG-GTACGCGC........................................................................................................................................................................................................................................................................................................................................................2711.0010001000
...............................................................................................................................................................AT-------AAATCAAAGTTTGAAAGTACAGG-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
...............................................................................CCTATTGCACCTGCACACA-----------------GT--------------CGCG----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGAGGCCTCCGGCAAG.......2011.0010100000
droYak3
A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACATGA--------------GAG-ACCCTCCTTTATTTGTCTTTGAAA-AATGCC--ATTAAATCTTAATTGATTTGTTT------------------------------------------------------------------------------------------------TTATAT-----------------------------------------------------------------------ATATTTTTATATACTGCAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............GTA---------------------CTCG-AA-----------------------------------ACCTATTGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
...................................................................................TTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..........................................................................................................................................................................ATCAAAGTTTGAAAGTACAGG-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................CAAAGTTTGAAAGTACAGG-------------CAA------.............................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............................................................................ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000100000
...................................................................................TTGCACCTGCACACA-----------------GT--------------CGCG----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.................................................................................................A-----------------GT--------------CGCG----CTCTAATCAATTCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACCGAGGCCTCCGGC..........1911.00101000000000
....................................................................................................................................................................................GAAAGTACAGG-------------CAA------AGTCAA---A...................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................AGTTTGAAAGTACAGG-------------CAA------AGTCAA---A...................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................................................................................................TTGAAAGTACAGG-------------CAA------AGTCAA---A...................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGGCGAAAGCAATCACCGA....................2411.00101000000000
..............A---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.......................................................................................................................................................CTAAGTAAAT-------AAATCAAAGT................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............GTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
A--------AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000
................................................................................................CA-----------------GT--------------CGCG----CTCTAATCAATTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................................CACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAATCACCGAGGCCTCCGGC..........2511.00100100000000
....................................................................................TGCACCTGCACACA-----------------GT--------------CGCG----CTCTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-ATCATGTCGGCGAAAGCAAT..........................2111.00100000010000
.........AACGTA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
................................................................................CTATTGCACCTGCACACA-----------------GT--------------CGCG----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-ATCATGTCGGCGAAAGCAATCACCG.....................2611.00101000000000
.................................................................................TATTGCACCTGCACACA-----------------GT--------------CGCG----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
A--------AACGAA---------------------CTCA-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT------AAAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-ACA--A--------------GA----CCTCCTTTATTCGTCTTTGAAG-AATGCT--ATAAAA-----------------------------------------------------------------------------------------------------------------------------------ATCTATAT----------------------TCCTTC----AATCT-----TTTATAA-------T--------TGCAGC----------------TCC-ATCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droBia1
A--------AGAGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCGATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAC-A--CGA--------------GA----CCTCCTCTATTCGTCTTTGAAA-AATGCTATA--ATA--TGAAC-----------------------------------------------------------------------------------------TAA--------------------------------------------------------------ACCGTC----GATCT-----TGTTCCA-------T--------TACAGC----------------TTC-ATCATGTCGGCGAAAGCAATCACGGAGGCCACCGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droTak1
A--------AACGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAGC-ACACGA--------------GAC-GACCTCCTCTATTTGTCTTTGATA-TTTGCC--CTGAAA-----------------------------------------------------------------------------------------------------------------------------------TTCTAG--------------------TAATTCCCCT----GATAT-----TGTCTTG-------T--------TACAGC----------------TTC-AACATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droEle1
A--------AGCGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACATATTCGACAT--ATTCGCCGC--------------CGCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGT------------------------------TCCTCCTCTATTCGTCTTTGAGA-CTGTCTTTACTAGATCTTTAC-----------------------------------------------------------------------------------------CAGACTG----------------------------------------------------------TCCTCT----GATCT-----TG----C-------T--------TGCAGC----------------TCC-ATCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droRho1
A--------AGCGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACATA-----------------TT--------------CTCG----CTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGCAC-C--CGA--------------CA---ACCTCCTCTATTCGTCTTTCAAG-CTGGGT--TTCAAATCTTAAC-----------------------------------------------------------------------------------------TAG--------------------------------------AC----------------------TTCTCC----GATCT----CTT----C-------T--------TACAGC----------------TCC-ATCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droFic1
A--------AACAAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------GT--------------CGTG--CTCTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACG-GTACGCGCGAAGCC--CGA--------------GA---GCCTCCTCTATTCGTCTTTGAAC-AAGGCT--TA--------------------------------------------------CGAA-------------------------------------------AACTAT--------------------------------------AT----------------------ATCTTTA-TTGATCT----CTGT---A-------T--------TACAGC----------------TCC-AACATGTCGGCGAAAGCAATCACGGAGGCCTCTGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droKik1
CCCGACGCCAGCGAA---------------------CTCG-AA-----------------------------------ACCTATTGCACCTGCACACA-----------------ATA---G-CGC------GCG--CTCCCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGA-------------CAA------AGTCAAGCCACG-GTACGCGCGCAA-ATA-------------------------GCCTCTAAACGCCTTTGAAT------------AGATC------GCTT-------------------------------TA------------------------------------------C--------TTGACT-----------ATATAAATACCTATAAA-------------------------------ACCTCTGGTTAATCT-----------C-------T--------TGCAGC----------------TCC-AGAATGTCGGCGAAAGCAATTACGGAGGCCTCCGGCAAGGACATCCSizeHit CountTotal NormTotal
No Reads
droAna3
A--------AACCAA---------------------GCCC-AAG-----------------------CCC-----ACTACCTACTGCACCTGTATACGCTCGA--------------A---G-CGCGCACTCGCT-TGTCTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACGCGTACGCGCCT----------------------G---GT----C-TATATA------------------------------------------------CATATTTCTCTCCCCACCGATTACCGAT------------------------------------CACTATATG---TATACT---------------------ATCAA--TCC----ATTAT------GTCGTATTGATGTC------T-C-CT----CTCT----CTAC---C--------TAGAGT----------------TTC-ACCATGTCGGCGAAAGCAATCACGGAGGCCTCCGGTAAGGACATCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAATCACGGAGGCCTCC.............2213.003120000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----------------TTC-ACCATGTCGGCGAAAGC.............................2211.001000001
.............................................................................................ATACGCTCGA--------------A---G-CGCGCACTCGCT-T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
....................................................................................TGCACCTGTATACGCTCGA--------------A---G-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................ATACGCTCGA--------------A---G-CGCGCACTCGCT-TGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-ACCATGTCGGCGAAAGC.............................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATCACGGAGGCCTCC.............1811.001100000
...........................................................................ACTACCTACTGCACCTGTATACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................TACTGCACCTGTATACGCTCGA--------------A---G-C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................CCTACTGCACCTGTATACGCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
......................................................................................................A--------------A---G-CGCGCACTCGCT-TGTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATCACGGAGGCCTCC.............1911.001000010
...........................................................................................GTATACGCTCGA--------------A---G-CGCGCACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................................AAG-----------------------CCC-----ACTACCTACTGCACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGCGAAAGCAATCACGGA....................2311.001000010
.........................................................................................................................G-CGCGCACTCGCT-TGTCTCTAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...........................................................................................GTATACGCTCGA--------------A---G-CGCGCACTCGCT-T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
A--------AGCCAA---------------------GCCCAAA-----------------------------------ACCTATTGCACCTGTATACGA----------------ATAGAAACCGCGCACTCGCT-TCTCTCTAATCAATTCTAAGTAAAT-------AAATCAAAGTTTGAAAGTACAGG-------------CAA------AGTCAA---ACGCGTACGCGCTT----------------------G---GT----C-TATATATTTCGTTGCG---------------------------------------------------------ATTACTGATCACTATATGTACCTATCCCTCCCTGATATTTCTACCCCG----------------------------------CTATAAAATCTTAC--------------------TGATTTC------T-AT-T----CTTT----ATAT---G--------TAGAGT----------------TTC-ACCATGTCGGCGAAAGCAATTACGGAGGCCTCCGGTAAGGACATCCSizeHit CountTotal NormTotal
No Reads
dp5
A--------CACACA---------------------CACA-CA------------------------CCGTCAGAAATACCTATTGCACTTGCACACTCAC-ACACAAACACTCT--A---A-CGGGCG---GCTCCGTCTCTAATCAATTCTAAGTAAATACTTGTAAAATCAAAGTTTGAAAGTACAGA-------------CAA-----AAGTCAA---ACG-GTACGG--------CACGACACGGGGTGGGGTGG-GGT----C-CATATTTGCCATTGAAT-----------------------------------------------------------TCCGAT------------------------------------CCATGCCTA---TATCCTATGTTTCT--------------------------------------------------------------CT----CTTT----CTACCCTT--------GACAGC----------------ATCTGGGATGTCGGCGAAAGCAATCACTGAAGCCACGGGCAAGGATATCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCACTGAAGCCACGGGCAA........2212.0020110000000
..................................................................................................................................................................................................................................GTACGG--------CACGACACGGGGTG....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAATCACTGAAGCCAC..............1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCACTGAAGCCACGGG...........1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------ATCTGGGATGTCGGCGAA................................1911.0010100000000
..........................................................................................................................................................................................................................A---ACG-GTACGG--------CACGACACGGG.......................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGATGTCGGCGAAAGC.............................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCGAAAGCAATCACTGAAG..................2311.0010100000000
..........ACACA---------------------CACA-CA------------------------CCGTCAGAAATACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000
.............................................................................................................CACTCT--A---A-CGGGCG---GCTCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCGAAAGCAATCACTG.....................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAAGCCACGGGCAAG.......1911.0010100000000
..........................................................................................TGCACACTCAC-ACACAAACACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................A-------------CAA-----AAGTCAA---ACG-GTACGG--------..................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC----------------ATCTGGGATGTCGGCGAAA...............................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGGATGTCGGCGAAAGC.............................2111.0010000100000
..................................................................................................................................................................................................................................................................................TTTGCCATTGAAT-----------------------------------------------------------TCCGAT------------------------------------C.............................................................................................................................................................................................2011.0010000001000
.............CA---------------------CACA-CA------------------------CCGTCAGAAATACCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
.....................................ACA-CA------------------------CCGTCAGAAATACCTATTGCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
droPer2
A--------CACACA---------------------CACA-CA------------------------CCGTCAGAAATACCTATTGCACTTGCACACTCAC-ACACAAACACTCT--A---A-CGGGCG---GCTCCGTCTCTAATCAATTCTAAGTAAATACTTGTAAAATCAAAGTTTGAAAGTACAGA-------------CAA-----AAGTCAA---ACG-GTACGG--------CACGACACGGGGTGGGGTGG-GGT----C-CATATTTGCCATTGAAT-----------------------------------------------------------TCCGAT------------------------------------CCATGCCTA---TATCCTATGTTTCT--------------------------------------------------------------CT----CTTT----CTACCCTT--------GACAGC----------------ATCTGGGATGTCGGCGAAAGCAATCACTGAAGCCACGGGCAAGGATATCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCGGCGAAAGCAAT..........................1812.002200000
.................................................................................................................................................................ACTTGTAAAATCAAAGTTTGAAAGT........................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................AATCAAAGTTTGAAAGTACAGA-------------......................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................ATCAAAGTTTGAAAGTACAGA-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAATCACTGAAGCCACGGGCAAGG......2811.001001000
.......................................................................................................CACAAACACTCT--A---A-CGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................TTGAAAGTACAGA-------------CAA-----AAGT..........................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.......................................................................CAGAAATACCTATTGCACTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................GTAAAATCAAAGTTTGAAAGTACAGA-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droWil2
T--------AACAAA---------------------CACA-CA------------------------CTT------GTACGCATTGCACTCGCAGTTG-----------------GC--------------AGCA---ACTAAAATCATTTCTAAGCGTCT----ATAGAATCAAAGTTTGAAAGTACAGA-------------CAA-GGGAAAGTCAA---ACG-GTACGATAAA-----------TGGGCTGGG---G-GGAACAT---ATTTTCTTCCTTGACA-ATAG---TACTAAATC--------------------------------------------------------------------------------------ATTTTAA---TGCTTTATTT---------------------------------------------------------------TATTC----CTT----TTTGTTTTT--------TATAGC----------------------CATGTCTGCCAAAGCCATCACAGAAGCCACTGGCAAGGACATTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................GAAAGTACAGA-------------CAA-GGGAAAGT..........................................................................................................................................................................................................................................................................................................................................................................2215.00500320
....................................................................................................................................................................................GAAAGTACAGA-------------CAA-GGGAAAGTC.........................................................................................................................................................................................................................................................................................................................................................................2314.00400310
........................................................................................................................................................................................GTACAGA-------------CAA-GGGAAAGT..........................................................................................................................................................................................................................................................................................................................................................................1813.00301110
....................................................................................................................................................................................GAAAGTACAGA-------------CAA-GGGAAA............................................................................................................................................................................................................................................................................................................................................................................2012.00201010
.....................................................................................................................................................................................AAAGTACAGA-------------CAA-GGGAAAGT..........................................................................................................................................................................................................................................................................................................................................................................2112.00200110
......................................................................................................................................................................................AAGTACAGA-------------CAA-GGGAAAGT..........................................................................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................................................................................................................TCTAAGCGTCT----ATAGAATCA....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................................................................................................................C--------------AGCA---ACTAAAATCATTTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................................................................................................CGTCT----ATAGAATCAAAGT................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
.................................................................................................................................................................................TTTGAAAGTACAGA-------------CAA-GGGAAAGT..........................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......................................................................................................................................................................................AAGTACAGA-------------CAA-GGGAAAGTCAA---....................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.........................................................................................................................................................AAGCGTCT----ATAGAATCAAAGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................CT----ATAGAATCAAAGTTTGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................................................................................AATCATTTCTAAGCGTCT----ATAGA........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGAAGCCACTGGCAAGGACAT..2511.00100100
....................................CACA-CA------------------------CTT------GTACGCATTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCATCACAGAAGCCACT.............2111.00100010
.....................................................................................................................................................................................AAAGTACAGA-------------CAA-GGGAAAGTCA........................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..............................................................................................................................................................................AAGTTTGAAAGTACAGA-------------CAA-GGGAA.............................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........................................................................................................................................................AAGCGTCT----ATAGAATCAAAGT................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................AAGTCAA---ACG-GTACGATAAA-----------TGGGC......................................................................................................................................................................................................................................................................................................................................2511.00100001
........................................................................................................................................................................................GTACAGA-------------CAA-GGGAAAGTC.........................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...................................................................................................................................................ATTTCTAAGCGTCT----ATAGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..........................................A------------------------CTT------GTACGCATTGCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.....................................................................................................................................................................................AAAGTACAGA-------------CAA-GGGAAA............................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..........................................A------------------------CTT------GTACGCATTGCACTCGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
......................................CA-CA------------------------CTT------GTACGCATTGCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.........................................................................................................................................................AAGCGTCT----ATAGAATCAAAGTTTGA............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
................................................................................................................................................................T----ATAGAATCAAAGTTTGAAAGT........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................TTGAAAGTACAGA-------------CAA-GGGAAAGT..........................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.............................................................................................................................................................................AAAGTTTGAAAGTACAGA-------------CAA-GGGA..............................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCAAAGCCATCACAGAAGC.................2211.00100010
.................................................................................................................................................................................TTTGAAAGTACAGA-------------CAA-GGGAAA............................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................AAAGTTTGAAAGTACAGA-------------CAA-GGGAA.............................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.................................................................................................................................................................................TTTGAAAGTACAGA-------------CAA-GGGAAAGTCA........................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.................................................................................................................................................................................TTTGAAAGTACAGA-------------CAA-GGG...............................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................GTACGCATTGCACTCGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................................................................................................................................................AAGCGTCT----ATAGAATCAAAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................................................................................CATTGCACTCGCAGTTG-----------------GC--------------AGCA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..................................................................................................................................................................................TTGAAAGTACAGA-------------CAA-GGGAAA............................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........................................................................................................................................................AGCGTCT----ATAGAATCAAAGT................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCACTGGCAAGGAC....1811.00110000
..........................................................................................................................................................................ATCAAAGTTTGAAAGTACAGA-------------C.....................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
....................................................................................................................................................................................GAAAGTACAGA-------------CAA-GGGA..............................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..................................................................................................................................................................................TTGAAAGTACAGA-------------CAA-GGGAAAGTC.........................................................................................................................................................................................................................................................................................................................................................................2511.00100100
....................................................................................................................................................................................GAAAGTACAGA-------------CAA-GGGAA.............................................................................................................................................................................................................................................................................................................................................................................1911.00100100
............................................................................GTACGCATTGCACTCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......................................................................................................................................................................................AAGTACAGA-------------CAA-GGGAAAGTC.........................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
A--------GGCAGG-------------------TGCTCA-AAAGCTT---------------------------------GGCTGCACTCGCGC------------------------------------------GTCCCTAATCAATTCTAAGCAAAT------AGAATCAAAGTTTGAAAGTACGGG-------------CGAACCCAATGTCAA---GCG-AAACTTTTGAAT-ACAAGT--------------G---------------------------------------------------------------------------------------------------------------------------------TATAATAA---TAA-------------------------------TTT----GTCTTGGCAATATGCAAT--------TTG-TT-----------TACTCT-------T--------TACAGCAGAAGCCCCTCAAAAATAC-AGCATGTCTGCGAAAGCGATCACGGAAGCCACCGGCAAAGACATCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................TGCTCA-AAAGCTT---------------------------------GGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACGGAAGCCACCGGCAAAGA.....2411.001000000000000000000000000000000000000100000000000000000000000000
...................................GCTCA-AAAGCTT---------------------------------GGCTGCACTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATAC-AGCATGTCTGC...................................1911.001000000000000000100000000000000000000000000000000000000000000000
......................................CA-AAAGCTT---------------------------------GGCTGCACTCGCGC------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGAAAGCGATCACGGAAGCCACC.............2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTGAAAGTACGGG-------------CGAACC................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGCATGTCTGCGAAAGCGATCACGGAAGCCACCGGCAAGGACATCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AGCATGTCTGCGAAAGCG............................1911.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAAGCCACCGGCAAGGAC....2211.001100000
droGri2
A--------AACAGACAACAATACACTAGGCAGGTGCTTG-AAGACTTTGTTGCATTTTCTTACACAC------AAATA-----TTCACACACACACA-----------------CA--------------TGTA----CACTAA-----------------------AATTCAAGGTTTAGAAGCACAGCGTTTTTTTTTATATAA-----GAATCAT---AC---------------------------------------------------------------------A--TTTAAAA-----------------------------------------------------------------------------------------------------------------------------------TTTGCGT--ATTAACAATGTGAATT--------TGA-TT-----------TTCCAT-------T--------TGCAGCACACCCCAAT-TTTAATAC-AGCATGTCTGCGAAAGCGATCACGGAAGCCACTGGCAAAGACCTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AGCATGTCTGCGAAAG..............................1811.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGATCACGGAAGCCA...............1911.00110

Generated: 05/18/2015 at 04:19 PM