ID:

dsi_26584

 Coordinate:

3l:17799311-17799739 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-70.2 -70.2 -70.2

Flybase annnotation

five_prime_UTR [3l_17799212_17800293_-]; exon [3l_17799006_17800293_-]

Repeatable elements

NameClassFamilyStrand
Gypsy-22_DWil-I-intLTRGypsy-
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

#################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################
TTGTTTTCAGTTTTCAAGTGAAACCACCGGGATCCTGCGCTTGTTTTTTGGTTAATTCGTTAAGATATTCGGCAAGATTAAAATTATACTTCTTAAACATATATTTAACATATATACATATATATGTAAATAAAACCATAATATAACAATATATTATAATAATATATAAAATATAATATATAATATATAAATATATGATATATATATATATATATGTGTGATATGTAAATATGATATGTATATATATATATAATATATGTGTGATATGCGAGTGTCTGTTTTCGACTACAGATGTACGCAATATAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGAGCTCATTACTGAGCGGAATAATTGAGCTCCCAACAGAAAACAACTGCATTGCTTTGTGTCTAGCGATGTATGTATGTACATGCTTTTGTGAATATATATGATCGTCTTCGCTGATAGGGTTTGTCGTTATAACTTTTAGAACCCTGTGAGAAGTCTGGCTTAAACTGTTGACGAGTAATAACGATGCGA
**********************************************************((((((...((.(((..(((((...(((((.............((((((.(((((((....)))))))))))))................((((((((((.((.(((((...))))).))))))))))))..(((((((...(((((((((((((((((((.((((....)))).)))))))))))))))))))...)))))))....((((..(((((((........)))))))..)))).)))))..))))).))).)).))))))((((((.((((..(((((....)))))..........)))).)))).))..........*********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902008
ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M053
female body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAAAAATAACGATGCGA 21 2 1 31.00 31 31 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAATAACGATGCGA 19 2 3 11.00 33 33 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................CCCAACAGAAAACAACTG............................................................................................................................................... 18 0 1 8.00 8 0 0 8 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAAATAACGATGCGA 18 2 11 7.82 86 86 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGATCGTCTTCGCTGT........................................................................... 21 2 1 7.00 7 0 6 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAATGATCGTCTTCGCT............................................................................. 21 3 4 5.25 21 0 16 0 0 2 3 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAAAATAACGATGCGA 20 2 2 5.00 10 10 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAAAAATAACGATGCG. 20 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAATGATCGTCTTCGCTG............................................................................ 21 2 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0
..........................................................GTTAAGATATTCGGCAAGATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGAACCCTGTGAGAAGTCTGGCT............................. 27 2 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAACCCTGTGAGAAG.................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGAACCCTGTGAGAAGTCTGGC.............................. 26 2 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTTAGAACCCTGTGAGAAGTCT................................. 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................TTTGGTTAATTCGTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 16 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGAAAAATAACGATGCGA 22 3 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGATCGTCTTCGCTGTA.......................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGAAGTCTGGCTTAAACTG...................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TGTTTTCGACTACAGATGCAC........................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTCTGGCTTAAACTGG..................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TATATATATATATATGTGTGA.................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCTTAAACTGTTGACGAGT............. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCTTAAACTGTTGACGAGTAATAA........ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGTGAGAAGTCTGGCTTAAACT....................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................CTTTGGCAGCTGAGCTCATTACT................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATATATGATCGTCTT................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGACGAAAAATAACGATGCG. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAACCCTGTGAGAAGTCTGGCTT............................ 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................ATTACTGAGCGGAATAATTGAGCT................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGATCGTCTTCGCTGTC.......................................................................... 21 3 4 1.00 4 0 4 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAACTGTTGACGAGTAATAA........ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGATCGTCTTCGCTGT........................................................................... 20 2 2 1.00 2 0 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGATCGTCTTCGCTGTT.......................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCTTAAACTGTTGACGAGTAA........... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................ATATGTAAATATGATATGTAT................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCGTTATAACTTTTAGA................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
TTGTTTTCAGTTTTCAAGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGTGAGAAGTCTGGC.............................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................AACCACCGGGATCCTGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCTTAAACTGTTGACGAGG............. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTGTTGACGAGTAATAACGA..... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCGTTATAACTTTTAGAACCCT............................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCTGGCTTAAACTGTTGAC................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTAAACTGTTGACGAGTAATAACGA..... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................TCGACTACAGATGTACGCAAT................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................TATTCGGCAAGATTAAAATTATACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCCTGTGAGAAGTCTGGCT............................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGATCGTCTTCGCTG............................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATAAATGATCGTCTTCGC.............................................................................. 21 3 5 0.80 4 0 4 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAATGATCGTCTTCGCTG............................................................................ 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGAAAAATAACGATGCGA 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................CTGAGTTCATTCCTCAGCGGA............................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAATGATCGTCTTCGC.............................................................................. 20 3 10 0.30 3 0 1 0 0 0 2 0 0 0 0 0 0
.........................ACCGGGTTCTTGCGTTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 3 16 0.25 4 4 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TACTTTTTAAACATACTTTTAACA................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGAAAAATAACGATGCG. 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................CGGGATCTTGCGTTTGTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................CTTTGGAAGCTGGGCGCATT...................................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................................................................................................................................GTAACCTGAGCTCATTACT................................................................................................................................................................................... 19 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
................AGTGGAACCACCTGTATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................TGTCTGGTTAATTCGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTAGCGATCTCTGGA................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTAGTGTCTAGC............................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
................TGTGAAACCCCCGGGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................CAGGTCATCAGCTAAAA................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.................GTGAAACCCCCGGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AACAAAAGTCAAAAGTTCACTTTGGTGGCCCTAGGACGCGAACAAAAAACCAATTAAGCAATTCTATAAGCCGTTCTAATTTTAATATGAAGAATTTGTATATAAATTGTATATATGTATATATACATTTATTTTGGTATTATATTGTTATATAATATTATTATATATTTTATATTATATATTATATATTTATATACTATATATATATATATATACACACTATACATTTATACTATACATATATATATATATTATATACACACTATACGCTCACAGACAAAAGCTGATGTCTACATGCGTTATATTCCATTAGTCGATTTTAAATTGGAAACCGTCGACTCGAGTAATGACTCGCCTTATTAACTCGAGGGTTGTCTTTTGTTGACGTAACGAAACACAGATCGCTACATACATACATGTACGAAAACACTTATATATACTAGCAGAAGCGACTATCCCAAACAGCAATATTGAAAATCTTGGGACACTCTTCAGACCGAATTTGACAACTGCTCATTATTGCTACGCT
***********************************************************************************************************************************************((((((...((.(((..(((((...(((((.............((((((.(((((((....)))))))))))))................((((((((((.((.(((((...))))).))))))))))))..(((((((...(((((((((((((((((((.((((....)))).)))))))))))))))))))...)))))))....((((..(((((((........)))))))..)))).)))))..))))).))).)).))))))((((((.((((..(((((....)))))..........)))).)))).))..........********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 M053
female body
 GSM343915
embryo
 M025
embryo
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTAGCAGAAGCGACAG.......................................................................... 21 3 4 8.00 32 28 0 0 0 0 4 0 0 0 0 0
...........................................................................................................................................................................ATATTATATATTATATATT................................................................................................................................................................................................................................................................................................................................................... 19 0 20 7.15 143 0 143 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTACTAGCAGAAGCGACA........................................................................... 21 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................AGCTGATGTCTACATGCGTTA................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACTAGCAGAAGC............................................................................... 16 1 4 1.50 6 1 0 3 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACTAGCAGAAG................................................................................ 15 1 9 1.11 10 2 0 0 7 0 1 0 0 0 0 0
.......................................................AAGCAATTCTATAAGCCGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................TAGGACGCGAACAAAAAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................GGTTGTCTTTTGTTGA................................................................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
......................................................TAAGCAATTCTATAAGCCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGCAGAAGCGACTAT......................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TGGAAACCGTCGACTCGAGTA....................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................CGAGGGTTGTCTTTTGTTGAC............................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................TTTGGTGGCCCTAGGACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................................ACGAAACACAGATCGCTACAT....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................AGCAATTCTATAAGCCGTTCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................GTAATGACTCGCCTTATTAAC..................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTAGCAGAAGC............................................................................... 15 1 11 0.82 9 1 0 3 3 0 2 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ACAAAAGCTGATGTC.............................................................................................................................................................................................................................................. 15 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTAGCAGAAGCGACAT.......................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAGCAGAAGCGACA........................................................................... 17 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ACAGAAGCTGATGTCAACAT......................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTAGCAGAAGCTA............................................................................. 17 2 20 0.35 7 4 0 3 0 0 0 0 0 0 0 0
................................................................................................................ATAGGTATATCTACATTTATTT........................................................................................................................................................................................................................................................................................................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGTGAAGAAA...................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................ATATACTACATATATATATATAC........................................................................................................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................................................................................................CGAATCGCGTAATGAC.................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................ATGAAAAATTTGTATA........................................................................................................................................................................................................................................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
......................................................TAAGCAATTCAATAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................ATGAGGAATTTGTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CAAAAGCTGATGTCCT............................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:17799261-17799789 - dsi_26584 TTGT-TTTCA-------------------------------GTTTTCA------AGTGA---AAC----------CACCGGGATCC---TGCGCTTGTTTTTTGGTTAAT-----TCGTTAAGATATTCGGCAAGATTAAAATTATA-------------------------------CTTCTTA--A------ACATATATTTAACATATAT-------------------------------------------------------------------------------------------------------------ACATATATATGTAAA----TAAAACCATAATATAACAA---TATATTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATATAAAATATAATATATAATATAT--AAATATATGATATA-------------------TA-------TATATATAT------------------------------------------------------------------------------------------------------------ATGTGTG-ATATGTAAATATGATATGTATATA----TATATATA-----------------------------ATATATGTGTGATATGCGAGTGTC-TGTTTTCGACTACAGATGTACGC-AATA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGAGCTCATTA-CTGAGCGGAATA----ATTGAGCTCC-CAACAGAA---AACAACTGC-ATTGCTTTGTGTCTAGCGATGTATGT----ATGT-ACATG--CTTTTGTGAATATATAT----GATC-GTCTTCGCTGATAGGGT--T--TGTCGTTATAA----CTTTTAGAACCCTGTGAGAAGTCTG-GCTTAAACTGTTGA---CGAG-TAATAACGATG---------------------CGA
droSec2 scaffold_30:196820-197329 + TTGT-TTTCA-------------------------------GTTTTCA------AGTGA---AAC----------CACCGGGATCC---TGCGCTTGTTTTTTGGTTAAT-----TCGTTAAGATATTCGGCAAGATTAAAATTATA-------------------------------CTACTTA--A------ACATATATTTAACATATAT-------------------------------------------------------------------------------------------------------------ACATATATATGTAAA----TACAAGCATAATATAACAA---TATATTA------------TAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAATATAT--AAATATATGATATA-------------------T-----------ATATAT------------------------------------------------------------------------------------------------------------ATGTGTG-ATATGTAAATATGATATGTATATATA--TATATATA-----------------------------ATATATGTGTGATATGCGAGTGTC-TGTTTTCGACTACAGATGTACGC-AATA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGAGCTCATTA-CTGAGCGGAATA----ATTGAGCTCC-CAACAGAA---AACAACTGC-ATTGCTTTGTGTCTAGCGATGTATGT----ATGT-ACCTG--CTTTTGTGAATATATAT----GATC-GTCTTCGCTGATAGGGT--T--TGTCGTTATAA----CTTTTAGAACCCTGTGAGAAGTCTG-GCTTAAACTGTTGA---AGAG-TAATAACGATG---------------------CGA
dm3 chr4:467016-467496 + TTGT-TTTCT-------------------------------GCTTTCA------AGTGA---AGC----------CACCGAGATCC---TGCGCTTGTT--TTGGTTAAT-----TCG-TAA-----------------------TA-------------------------------CTTCTTA--A------GCATGTATA----------------------------------------AAACTTATA-----------------------------------------------------------------------CATGTATATGTAAA----TAAACCCA----------ATTATATATTA--TATATGTATA-----------------------------------------------------------------------------------------------------------------------TGTATATA--TATG--------------------------------------------------------------------------CAT----------------------------------ATA--------TATAAATATTGTATATTA---TT--G---------------------------------------------TATATATATATATAT---------------------------------------------------ATA---------------------T----ATATATATACGTA-A-----------------------------ATAT-TGTGTGATATGCAAGTGTC-TGTTTTCGACTACAGATGTACGC-AATA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGGGCTCATTA-CTGAGCGGAATA----ATTGAGCTCCCAAACCGAA---AACAACTGC-ATTGCTTTGTGTCTAGCTATGTATGT----ATGTAACCTG--CTTTTGTGAATATATAT----GATC-GTCTTCGCTGATAGGGT--T--CGTCGTTATAA----CTTTTAGAACCCTGTGAGAAGTCTG-GCTTAAACTGTTGA---AGAG-TAATAACCATG---------------------CGA
droEre2 scaffold_4512:822570-823018 - TCCT-GTTCT-------------------------------GTT-TAA------AGTGA---AGCAACTTATGTACACATAGATCC---TGTGCTTGTT--TTGGTTGATGAAAGTCGTTAGGATATTCGGAAAGATTAAAGTCTTA-------------------------------CTGCCTA--A------ACATAT---------------------------------------------------A-----------------------------------------------------------------------CATATATATATACA-------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------CACATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA--------TA---------------------------------------------------------------------TATATATATATATAT---------------------------------------------------ATA---------------------T----ATATATATAAGTG---------------------------------------------TATAAGTGTA-TGCTTTCAACTACAGATGTACTC-ATTA------------------------------TAAGGTAATCAGCTGAAATTTAACCTTTGGCAGCAGAGCTCATTAGCTGAGCGGAATA----ATTGAGTTCC-CAACCGAA---AACAACTGC-ATTGCTTTGTGTCTAGCTACATATGTATGTATGT-ACCTG--TATTTAAGAAT--ATAT----GCTC-GGCTTCGCTGATAAGGT--T--TGTCGTTAATA----TTTTTAGAAACCTGTGAGAAGTCTG-GTTTAAGCTGTTGT---AGCG-TAATAACCATG---------------------CGA
droYak3 4:517264-517547 + TAT-ATATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATATA-----------------------------ATATATA-----CACACCAGAGTA-TGT-----ACTACAGATGTACTC-ATTA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCAGAACTCATTTGCTGAGCGCTATA----ATTGAGCTCC-AAACCGAA---AACAACTGC-ATAACTTTGTGTCTAGCTACATATGT----ATGT-ACCTGTGATTTTAGG----TATAT----GCTC-GGCTTCGCTGATAAGAA--T--TGTCGGTAAAA----TTATTAGAAACCTGTGGGAAGTCTG-ACTTAAGGTGTTGA---AGCG-CAATAACCATG---------------------CGA
droEug1 scf7180000408984:705336-705815 - GGT-GA--------------------------------------------------------------------------------------------------------------------------------TATTAAACTCAAA-------------------------------CA--------------------------------------------------------------------TTCGTAT-----------------------------------------GTATATACA------------TATGTACATGCGTATGTAA-----TA-AAGTAAAAGAAAATAA---GGTGTTC------------AACCATACAAGTGTAAACATAAACTAGACGAATACGTTAATAACGTATTTTTTATTTTAAATAAAAAATTTTTTGAAACAATATGCAGTTTAACACTAAATGCATT-TACTTAAAATAAT-CGTTGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAATGTT-T-TCTTTTATTATAAATGTGCATTATTGTAAAGTAGTTACATATCCTCGATTTTTTTGTAGGGTAAT---------AGTGACCTTTAACATCAGATCTCATTAGTTGAATTAAA--------------TC-TAAGCAAA---AACAACCTT-AATGTTTAGTGTCCAGCTACATATAT----ATGT---------------------ATAT----GTGT-GGCTTTGTTGATAAGAG--T--TGTTATTAAAATATTTTTTTAGAAATTTGTGAGAAGTCTG-GCTAGAACTGAACC---AACAATAATAACTATGCGCAATATTTGCGT----------
droBia1 scf7180000301495:283779-284041 + TAT-ATTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGGT----------------------------------------------------------TA---ATGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCGAGTGTGTTGTTTTCGAACACAAGTGTACGC-AATA------------------------------TAGGGTAATCAGCTAAAATGTAACCTTTGGCAGCAGAGCTTATTAGCTAAG-AGAATT----ATTAAGCCCC-GAAACGAA---AACAACTGC-ATTGCTTTGTGTCAAGCTG-------------------------------------TAT----GAGC-GGCTGTGCTGATAAGGT--TTGTGTCGTTCAAA-TATTTTTTAGAAACCTGTAAGAAGTCTG-GCTGGAACTGTTGA---AGCGACAATAACTATG---------------------CGA
droTak1 scf7180000415817:58498-58767 - ACAT-GTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAT-TGTATAATTACATATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-TCTGCGAGTGTGTTGTTTCCAACCACAACTGTACGC-ATTA------------------------------TAAGGTAATCAGCTAAAATGTAACCTTTGGCAGCAGAGCTTATTAGCTGAGA-GCATT----ATTAAGCCCC-GAAACGAA---AACAACTGC-ATTGCTTTGAGTCAAGCTG-------------------------------------TAT----GCGC-GACTTTGCTGATAAGGT--TT-CGTCGTTAAAA--TATTTCCAGAAACCTGTGAGAAGTCTG-GCTAGAGCTGTTGG---AGTGACAATAACTATG---------------------CGA
droEle1 scf7180000491238:839823-840215 - CTT-AAACAT---------------------------------------CTTTAAATA-TTA---AACTTAAATTCATA-------------------T--TAGGTTGAAATAAAACTTCAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------AATACTGAAACATGAAAATATATACATA------------TATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAT-------------------------------------------------------------------------------------------------------------GTATATTTATTGTG-------------------TA-------CTCATACAG------------------------------------------------------------------------------------------------------------ATG---------------------T----GTACATACAAGTAT--------------------------------------------TACAAGCGTGTTGTTTTCGACCAC--------------A------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCAGAGCTCATTAGCTGATCAGAATTGTTTA--AAGCCCC-GAAACAAA---AACAACTGC-ATTGCTTTGTGTCGAGTTACATTCAT-----------------------GCATATGAAT----ATGCGGCTTTTGCTGATAAGGT--TCATGTCATTAAAT---CTTTTTAGAAATCGGTGAGAAGTCCG-ACCAGAACTGTCAA---TGCGAGAATAACTATGCGCCATTCCTGCGC----------
droRho1 scf7180000778926:24536-24667 - TAT-ATATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAT--ATATATT-----------------------------------------------------TATAT--------ATATAAATATA-------------------------------TA-ATATTT-ATA--------------------------------------------------------------------------------------------------------------------TATAT-------------------------------------------------------------------------------------------------------------AAATATATATTATA-------------------AA-------TATATATAT------------------------------------------------------------------------------------------------------------ATATATA-TAATATAAATATTATATATTTATATA--TATATATATTATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT----------
droFic1 scf7180000454040:56185-56737 + GAGT-TTTTA-------------------------------GTATTCA------AGTAAGCGAAA----------TGTCGGGACA----------TCTTTCC----TAGC-----A-AAAAAAGATTTTATTTCGATCGAAATATAAGTGTTCGAAAACAGCATTGGTTCTGAACAAAG-TTTTT--AGTATAAATAAATAAATTATAT-----------------------A------------------------------------------------------------------------------------------T------ATGTAG---------------------------------------------G-------------------------------------------------------------------------------------TAGGTTTACTCGC-GCGCTTT-AACGTAAACAAAC-TGTGAACTCGAAACATCGTTTAAAAAATAATTTAAATTTTACTGAAATACTGAATAAATTTCCTATCCTTACCATGTAC-------------------------------------ATTTA--------------------------------------------------------------------------------------TTTTCATAA----ATGTCTGA-------------------------------------------ATGTATCAATACGTAAATAC-AAACATACATACATATATAT-----------------------------------------------TTAAGTGTTTTGTTTTCAACCACAGATGTAGAC-ATTA------------------------------TAAGGTAATCAGCTTAATTTTAACCTTTGACAGC-GAGCTCATTTGCTCGA-------------------------TAGAA---AATATTT---TTTATTTTGTGTCAGATTATA-------------------------------------TGAATGTGTTGTTTCTGCTGATAAGCT--TTATGTCATTCAAT-TTCATTTCAGAAATTTGC-TGAGGTCGA-AATATAACTGTCAC---AAGAACATTAACTATGCGCCAGATAAGCGC----------
droKik1 scf7180000302683:156736-156947 - CTAC-TTTCGTACAAAAGTTTGTGTGAAGTTTCCGTGTAACGTTCTTA------AATA----AAT----------CGCCAAATTCCGATTATTATTATTTTTTTTTCAGT-----T--------------------------------------------------------------TTACTTA--A------GAAGTTTTG----------------------------------------AAGTTT------TAATATCTAAACAATTTTTGAACCACTCAAAATAT------------------------------------------GTAAAAATA-------------------------------TATATATATA-----------------------------------------------------------------------------------------------------------------------TATATATA--TA---------------------------------------------------------------------------------------------------------------ATATA-------------------TA----------------------------------------------------------TATATATAT---------------------------------------------------------ATA---------------------TATATATA----TATATAT-------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13099:2611182-2611527 - ACGA-TTCTA-------------------------------GTTTGT-----------------------------------------------------------TAAT-----A-ACTAAAATTTTCAAAGTGATTTAAATTATA-------------------------------TTGTATG--A------AAG----TCTTATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGAATTTAAAAAATGATAAAAGTAATATTTAATTAAATACGTATAGTATTTGACAGATTTGAACATATTGGCGCACAA-CCT-----------------------ACAAGAGACTTATATATTTTGTTTTTTGTTTTTTTGTACAATAATCCATACGAGTCA-AATGTAATAATT--AAATACATG-TATA-------------------TA-------CACATGTACTCATTTGATTTTAAGGTGGAAGTATGGAATTTGTGATGTGCAT-----------------------------------------------------------------ATG-------------------TATGTATGTA----TGT------------------------------------------------------------------------------------ATA------------------------------CAACGTAATCAGCAAAAATATAGCCTTTGACATCTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396735:382667-382828 - TCAT-ATCTC-------------------------------GTT----------------------------------------------------------------------------AATACAC-------------------------------------------------------------------------ACT-----------------------TCAAAATTATATAACAAAAATTATTAATTAAATATAAA-----------------------------------------------------AATAT--------ATATAAATATA-------------------------------TA-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTATATAAATATATAAAATGTA-------TATAAATAT------------------------------------------------------------------------------------------------------------ATAAAAT-ATATATAAA-----------------------TATATAATATATATATAAATATA--------TAAAAT------------------------------------ATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------
dp5 Unknown_group_170:12169-12501 - TAT-ATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACATATA-------------------------------TATATGTATA-----------------------------------------------------------------------------------------------------------------------TATATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA--------TATAT------------------------------------------------------------------------------------------------------------------------------------ATATATGTATATGTATATAC-ATATATATGTACATATACATATC---------------------------------------------------------------------ATATA-GC-ACCA------------------------------CAACACAATCAGCTGA-ATATAACCTTTGGCT-CAGAGCCTACTG-TTCAG-GCGTTT----ATTGCGACCA-GAAACAAAAAAAACAACCGTTAGTGCT--------------------------------------TGTAGAAATATATTT----GTGCCGCTTTTGCTGATAAGATGCTTGTCTCATTGAAA-ATGTTTTTAGAAATGTAAGCAAAGTCTGTACGAAATCTGTTGATGGGGCGACGACAACTATGAGCCACACTTGCACACATTGACGA
droPer2 scaffold_42:426369-426737 - TAA-GT---------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGA---GCACCACTGTAT--GTATATG-----------------------------------------------------TATAT--------ATGTACATATA-------------------------------TATATGTATA-----------------------------------------------------------------------------------------------------------------------TATATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA-------------------TA-------TATATGTAT------------------------------------------------------------------------------------------------------------ATGTATGTATATGTATATAC-ATATATATGTACATATACATATC---------------------------------------------------------------------ATATA-GC-ACCA------------------------------CAACACAATCAGCTGA-ATATAACCTTTGGCT-CAGAGCCTACTG-TTCAG-GCGTTT----ATTGCGACCA-GAAACAAAAAAAACAACCGTTAGTGCT--------------------------------------TGTAGAAATATATTT----GTGCCGCTTTTGCTGATAAGATGCTTGTCTCATTGAAA-ATGTTTTTAGAAATGTAAGCAAAGTCTGTACGAAATCTGTTGATGGGGCGACGACAACTATGAGCCACACTTGCACACATTGACGA
droVir3 scaffold_12970:1944773-1945032 - ACCA-TTGGG-------------------------------ATTTGTTTCTTTAGTTA-ATC---AAATAAACAAC--------------------------------AT-----TCA-TAA-----------------------TT-------------------------------T-GCTTCAAA------ATACGCATG----------------------------------------ACATTGCTATGT--TTAT-----------------------------------------------------------------------ATACATATG-------------------------------TATATGTATA-----------------------------------------------------------------------------------------------------------------------TATATTTG--TGTA--------------------------------------------------------------------------TGT----------------------------------ATA--------TGCATATATTGCATCTTGTATTT--G---------------------------------------------TATTTGTATAT----ATATCTATTTATATATGTAATAGACACCGAAAACCACATGTACATACATTCATGTTCT-GTATATAGATATTGTATATATATATA--TATATATTCTATGTG-------------------------------TAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6498:1152514-1152702 - TAT-ATTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--T------ATATGTATATTATAT-----------------------A------------------------------------------------------------------------------------------T------ATGTAT---------------------------------------------A-------------------------------------------------------------------------------------TAAG----CTCCCGTAGCAATCAACATATATGTATGTATAAACCTGAAG-ATT----------------------------------------------------------------------------------------------------------ACA-------------------AA-------AATATATG----------------------------------------------------------------------------------------------------------CTTAA-TTAA-AAAAATATGTAAAATATATATATATA--TATGTATAATATAAATAAATAT----AACGACTCATAGAACATGCGTTGCATTCTAGTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_7766:2000-2167 - ATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGATATATATATATATATATTATATT-----------------------------------------------------------------------------------------------------------------------------TA---TATATTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATTATATATA-TATATTATATATATATATATATATTATA-------------------TA-------TACATATAT------------------------------------------------------------------------------------------------------------ATATATT-ATATTTAAATATTGTATATATATA----TATATATTATATATATATATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT----ATATTTTTTTT------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGT-TTTCA-------------------------------GTTTTCA------AGTGA---AAC----------CACCGGGATCC---TGCGCTTGTTTTTTGGTTAAT-----TCGTTAAGATATTCGGCAAGATTAAAATTATA-------------------------------CTTCTTA--A------ACATATATTTAACATATAT-------------------------------------------------------------------------------------------------------------ACATATATATGTAAA----TAAAACCATAATATAACAA---TATATTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATATAAAATATAATATATAATATAT--AAATATATGATATA-------------------TA-------TATATATAT------------------------------------------------------------------------------------------------------------ATGTGTG-ATATGTAAATATGATATGTATATA----TATATATA-----------------------------ATATATGTGTGATATGCGAGTGTC-TGTTTTCGACTACAGATGTACGC-AATA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGAGCTCATTA-CTGAGCGGAATA----ATTGAGCTCC-CAACAGAA---AACAACTGC-ATTGCTTTGTGTCTAGCGATGTATGT----ATGT-ACATG--CTTTTGTGAATATATAT----GATC-GTCTTCGCTGATAGGGT--T--TGTCGTTATAA----CTTTTAGAACCCTGTGAGAAGTCTG-GCTTAAACTGTTGA---CGAG-TAATAACGATG---------------------CGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-CAACAGAA---AACAACTG..............................................................................................................................................................................................1818.00880000000000000000
.....................................................................................................................GTTAAGATATTCGGCAAGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000003000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAACCCTGTGAGAAG..............................................................1912.00220000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----CTTTTAGAACCCTGTGAGAAGTCT...........................................................2512.00220000000000000000
....................................................................................................TTTGGTTAAT-----TCGTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000020000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGAAGTCTG-GCTTAAACTG...............................................2311.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTCTG-GCTTAAACTGG..............................................2111.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-------------------TA-------TATATATAT------------------------------------------------------------------------------------------------------------ATGTGTG-A.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GCTTAAACTGTTGA---CGAG-T..................................2311.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-GCTTAAACTGTTGA---CGAG-TAATAA.............................2711.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGTGAGAAGTCTG-GCTTAAACT................................................2611.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCAGCTGAGCTCATTA-CT..........................................................................................................................................................................................................................................2311.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATATAT----GATC-GTCTT...................................................................................................................2111.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTA-CTGAGCGGAATA----ATTGAGCT....................................................................................................................................................................................................................2411.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAACTGTTGA---CGAG-TAATAA.............................2411.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GCTTAAACTGTTGA---CGAG-TAA................................2511.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTAAATATGATATGTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--T--TGTCGTTATAA----CTTTTAGA...........................................................................2111.00100000010000000000
TTGT-TTTCA-------------------------------GTTTTCA------AGTGA---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGTGAGAAGTCTG-GC.......................................................1811.00100100000000000000
..............................................................AAC----------CACCGGGATCC---TGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GCTTAAACTGTTGA---CGAG-G..................................2311.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTGTTGA---CGAG-TAATAACGA..........................2511.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGTCGTTATAA----CTTTTAGAACCCT......................................................................2511.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCTG-GCTTAAACTGTTGA---C.......................................2311.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GCTTAAACTGTTGA---CGAG-TAATAACGA..........................2911.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTACAGATGTACGC-AAT.........................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
............................................................................................................................TATTCGGCAAGATTAAAATTATA-------------------------------CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCCTGTGAGAAGTCTG-GCT......................................................2311.00110000000000000000
droSec2
TTGT-TTTCA-------------------------------GTTTTCA------AGTGA---AAC----------CACCGGGATCC---TGCGCTTGTTTTTTGGTTAAT-----TCGTTAAGATATTCGGCAAGATTAAAATTATA-------------------------------CTACTTA--A------ACATATATTTAACATATAT-------------------------------------------------------------------------------------------------------------ACATATATATGTAAA----TACAAGCATAATATAACAA---TATATTA------------TAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAATATAT--AAATATATGATATA-------------------T-----------ATATAT------------------------------------------------------------------------------------------------------------ATGTGTG-ATATGTAAATATGATATGTATATATA--TATATATA-----------------------------ATATATGTGTGATATGCGAGTGTC-TGTTTTCGACTACAGATGTACGC-AATA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGAGCTCATTA-CTGAGCGGAATA----ATTGAGCTCC-CAACAGAA---AACAACTGC-ATTGCTTTGTGTCTAGCGATGTATGT----ATGT-ACCTG--CTTTTGTGAATATATAT----GATC-GTCTTCGCTGATAGGGT--T--TGTCGTTATAA----CTTTTAGAACCCTGTGAGAAGTCTG-GCTTAAACTGTTGA---AGAG-TAATAACGATG---------------------CGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCTGTGAGAAGTCTG-GC.......................................................2112.0020110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-CTGAGCGGAATA----ATTGAG......................................................................................................................................................................................................................2111.0010001
...............................................A------AGTGA---AAC----------CACCGGGATCC---TGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGTC-TGTTTTCGACTACAG.....................................................................................................................................................................................................................................................................................................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGCGATGTATGT----ATG...........................................................................................................................................................1811.0010001
..........................................................................................................TAAT-----TCGTTAAGATATTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGA---AGAG-TAATAACGATG---------------------CGA2211.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGATATGCGAGTGTC-TG..................................................................................................................................................................................................................................................................................................................................................2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATATGCGAGTGTC-TGTTTTCGACT.........................................................................................................................................................................................................................................................................................................................................2711.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGATGTACGC-AATA------------------------------TAAG......................................................................................................................................................................................................................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTTGA---AGAG-TAATAACGATG---------------------...2311.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCTTTGGCAGCTGAGCTC.................................................................................................................................................................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-CTGAGCGGAATA----ATTGAGCT....................................................................................................................................................................................................................2311.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGC-ATTGCTTTGTGTCTAGCGAT........................................................................................................................................................................2611.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACCTTTGGCAGCTGA.....................................................................................................................................................................................................................................................1911.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGA---AGAG-TAATAACGATG---------------------C..2111.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGA---AGAG-TAATAACGATG---------------------...2011.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA----ATTGAGCTCC-CAACA............................................................................................................................................................................................................1811.0011000
..................................................................................................TTTTTGGTTAAT-----TCGTTAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTTGA---AGAG-TAATAACGA..........................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-ATATGTAAATATGATATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTCTG-GCTTAAACT................................................1811.0010010
dm3
TTGT-TTTCT-------------------------------GCTTTCA------AGTGA---AGC----------CACCGAGATCC---TGCGCTTGTT--TTGGTTAAT-----TCG-TAA-----------------------TA-------------------------------CTTCTTA--A------GCATGTATA----------------------------------------AAACTTATA-----------------------------------------------------------------------CATGTATATGTAAA----TAAACCCA----------ATTATATATTA--TATATGTATA-----------------------------------------------------------------------------------------------------------------------TGTATATA--TATG--------------------------------------------------------------------------CAT----------------------------------ATA--------TATAAATATTGTATATTA---TT--G---------------------------------------------TATATATATATATAT---------------------------------------------------ATA---------------------T----ATATATATACGTA-A-----------------------------ATAT-TGTGTGATATGCAAGTGTC-TGTTTTCGACTACAGATGTACGC-AATA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCTGGGCTCATTA-CTGAGCGGAATA----ATTGAGCTCCCAAACCGAA---AACAACTGC-ATTGCTTTGTGTCTAGCTATGTATGT----ATGTAACCTG--CTTTTGTGAATATATAT----GATC-GTCTTCGCTGATAGGGT--T--CGTCGTTATAA----CTTTTAGAACCCTGTGAGAAGTCTG-GCTTAAACTGTTGA---AGAG-TAATAACCATG---------------------CGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
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Head		SRR031699
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S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
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Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
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Ovary		SRR065151
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Ovary		SRR065153
Ovary		SRR065154
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Ovary		SRR065800
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Ovary		SRR065805
Ovary		SRR065806
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Ovary		SRR097865
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Ovary		SRR317117
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S2		SRR341116
S2		SRR341117
S2		SRR341118
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CME-L1		V001
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ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
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DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
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CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
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ML-DmD20-C5		V037
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ML-DmBG1-C1		V076
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fGS/OSS		V092
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G2		V128
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ML-DmD16-C3		V132
ML-DmD32		V133
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ML-DmD8		V135
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Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGAAGTCTG-GCTTAAACTGTT.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGT--T--CGTCGTTATAA----CTTTTAGAAC.........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGC-ATTGCTTTGTGTCTAGCT..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CA------AGTGA---AGC----------CACCGAGATCC---T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGTAATCAGCTAAAATTTAACC.................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGCTCATTA-CTGAGCGGA...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCAAGTGTC-TGTTTTCGACTAC.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-GCTTAAACTGTTGA---AGAG-...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGAATATATAT----GATC-GTC.....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................CCGAGATCC---TGCGCTTGTT--TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT----GATC-GTCTTCGCTGAC............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCTGATAGGGT--T--CGTCGTTATAA----C..................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAACCGAA---AACAACTGC-ATTGCT......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGAACCCTGTGAGAAG..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGT--T--CGTCGTTATAA----CTTTTAG............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTG-GCTTAAACTGTTGA---AGA.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CACCGAGATCC---TGCGCTTGTT--TTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-TGTGTGATATGCAAGTGTC-....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTG-GCTTAAACTGTTGA---AG......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTCCCAAACCGAA---AACAACTGC-AT..........................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATA------------------------------TAAGGTAATCAGCTA...........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACCGAA---AACAACTGC-ATTGCTT.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGAAGTCTG-GCTTAAACTGTTGA---AGA.....................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTCTG-GCTTAAACTGT..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA----ATTGAGCTCCCAAACCGAA---AACAAC................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA------------------------------TAAGGTAATCAGCTAAA.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TT--TTGGTTAAT-----TCG-TAA-----------------------TA-------------------------------CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCAAGTGTC-TGTTTTCGA...........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATA--TATG--------------------------------------------------------------------------CAT----------------------------------ATA--------TATAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGAAGTCTG-GCTTAAACT................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT----GATC-GTCTTCGCTG..............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA----ATTGAGCTCCCAAACCGAA---AACA..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GCTTAAACTGTTGA---AGAG-TAAT...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................TCA------AGTGA---AGC----------CACCGAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TGTGTGATATGCAAGTGTC-T...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCCTGTGAGAAGTCTG-GCT......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTATGT----ATGTAAC.......................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGGGCTCATTA-CTGAGCGGAAA.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................CACCGAGATCC---TGCGCTTGTT--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCCT-GTTCT-------------------------------GTT-TAA------AGTGA---AGCAACTTATGTACACATAGATCC---TGTGCTTGTT--TTGGTTGATGAAAGTCGTTAGGATATTCGGAAAGATTAAAGTCTTA-------------------------------CTGCCTA--A------ACATAT---------------------------------------------------A-----------------------------------------------------------------------CATATATATATACA-------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------CACATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA--------TA---------------------------------------------------------------------TATATATATATATAT---------------------------------------------------ATA---------------------T----ATATATATAAGTG---------------------------------------------TATAAGTGTA-TGCTTTCAACTACAGATGTACTC-ATTA------------------------------TAAGGTAATCAGCTGAAATTTAACCTTTGGCAGCAGAGCTCATTAGCTGAGCGGAATA----ATTGAGTTCC-CAACCGAA---AACAACTGC-ATTGCTTTGTGTCTAGCTACATATGTATGTATGT-ACCTG--TATTTAAGAAT--ATAT----GCTC-GGCTTCGCTGATAAGGT--T--TGTCGTTAATA----TTTTTAGAAACCTGTGAGAAGTCTG-GTTTAAGCTGTTGT---AGCG-TAATAACCATG---------------------CGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---AGCG-TAATAACCATG---------------------CG.1811.0010000010
..........................................................................................................TGATGAAAGTCGTTAGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTCTG-GTTTAAGCTGT..............................................2111.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-ATTGCTTTGTGTCTAGCTACATAT....................................................................................................................................................................2611.0010000100
........................................................................................................GTTGATGAAAGTCGTTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------CACATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA--------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22130.2330000030
.............................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------------------------------------------------CACATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA--------TA---------------------------------------------------------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.0710000010
...............................................................................................................................................................................................................................................................................................................................................CA-------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------CACATATA--TATA--------------------------------------------------------------------------TAT----------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.0610000010
................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------CACATATA--TATA--------------------------------------------------------------------------TAT----------------------------------AT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.0610000010
droYak3
TAT-ATATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATATA-----------------------------ATATATA-----CACACCAGAGTA-TGT-----ACTACAGATGTACTC-ATTA------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCAGAACTCATTTGCTGAGCGCTATA----ATTGAGCTCC-AAACCGAA---AACAACTGC-ATAACTTTGTGTCTAGCTACATATGT----ATGT-ACCTGTGATTTTAGG----TATAT----GCTC-GGCTTCGCTGATAAGAA--T--TGTCGGTAAAA----TTATTAGAAACCTGTGGGAAGTCTG-ACTTAAGGTGTTGA---AGCG-CAATAACCATG---------------------CGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGG----TATAT----GCTC-GGCTTCGC................................................................................................................2314.00430000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGG----TATAT----GCTC-GGCT....................................................................................................................2011.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAGAAACCTGTGGGAAGTC............................................................2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT----ATGT-ACCTGTGATTTTAGG----TA....................................................................................................................................2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT----GCTC-GGCTTCGCTGAT............................................................................................................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGTCGGTAAAA----TTATTAGA...........................................................................2011.00110000000000
droEug1
GGT-GA--------------------------------------------------------------------------------------------------------------------------------TATTAAACTCAAA-------------------------------CA--------------------------------------------------------------------TTCGTAT-----------------------------------------GTATATACA------------TATGTACATGCGTATGTAA-----TA-AAGTAAAAGAAAATAA---GGTGTTC------------AACCATACAAGTGTAAACATAAACTAGACGAATACGTTAATAACGTATTTTTTATTTTAAATAAAAAATTTTTTGAAACAATATGCAGTTTAACACTAAATGCATT-TACTTAAAATAAT-CGTTGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAATGTT-T-TCTTTTATTATAAATGTGCATTATTGTAAAGTAGTTACATATCCTCGATTTTTTTGTAGGGTAAT---------AGTGACCTTTAACATCAGATCTCATTAGTTGAATTAAA--------------TC-TAAGCAAA---AACAACCTT-AATGTTTAGTGTCCAGCTACATATAT----ATGT---------------------ATAT----GTGT-GGCTTTGTTGATAAGAG--T--TGTTATTAAAATATTTTTTTAGAAATTTGTGAGAAGTCTG-GCTAGAACTGAACC---AACAATAATAACTATGCGCAATATTTGCGT----------SizeHit CountTotal NormTotal
No Reads
droBia1
TAT-ATTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGGT----------------------------------------------------------TA---ATGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCGAGTGTGTTGTTTTCGAACACAAGTGTACGC-AATA------------------------------TAGGGTAATCAGCTAAAATGTAACCTTTGGCAGCAGAGCTTATTAGCTAAG-AGAATT----ATTAAGCCCC-GAAACGAA---AACAACTGC-ATTGCTTTGTGTCAAGCTG-------------------------------------TAT----GAGC-GGCTGTGCTGATAAGGT--TTGTGTCGTTCAAA-TATTTTTTAGAAACCTGTAAGAAGTCTG-GCTGGAACTGTTGA---AGCGACAATAACTATG---------------------CGASizeHit CountTotal NormTotal
No Reads
droTak1
ACAT-GTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAT-TGTATAATTACATATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-TCTGCGAGTGTGTTGTTTCCAACCACAACTGTACGC-ATTA------------------------------TAAGGTAATCAGCTAAAATGTAACCTTTGGCAGCAGAGCTTATTAGCTGAGA-GCATT----ATTAAGCCCC-GAAACGAA---AACAACTGC-ATTGCTTTGAGTCAAGCTG-------------------------------------TAT----GCGC-GACTTTGCTGATAAGGT--TT-CGTCGTTAAAA--TATTTCCAGAAACCTGTGAGAAGTCTG-GCTAGAGCTGTTGG---AGTGACAATAACTATG---------------------CGASizeHit CountTotal NormTotal
No Reads
droEle1
CTT-AAACAT---------------------------------------CTTTAAATA-TTA---AACTTAAATTCATA-------------------T--TAGGTTGAAATAAAACTTCAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------AATACTGAAACATGAAAATATATACATA------------TATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAT-------------------------------------------------------------------------------------------------------------GTATATTTATTGTG-------------------TA-------CTCATACAG------------------------------------------------------------------------------------------------------------ATG---------------------T----GTACATACAAGTAT--------------------------------------------TACAAGCGTGTTGTTTTCGACCAC--------------A------------------------------TAAGGTAATCAGCTAAAATTTAACCTTTGGCAGCAGAGCTCATTAGCTGATCAGAATTGTTTA--AAGCCCC-GAAACAAA---AACAACTGC-ATTGCTTTGTGTCGAGTTACATTCAT-----------------------GCATATGAAT----ATGCGGCTTTTGCTGATAAGGT--TCATGTCATTAAAT---CTTTTTAGAAATCGGTGAGAAGTCCG-ACCAGAACTGTCAA---TGCGAGAATAACTATGCGCCATTCCTGCGC----------SizeHit CountTotal NormTotal
No Reads
droRho1
TAT-ATATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAT--ATATATT-----------------------------------------------------TATAT--------ATATAAATATA-------------------------------TA-ATATTT-ATA--------------------------------------------------------------------------------------------------------------------TATAT-------------------------------------------------------------------------------------------------------------AAATATATATTATA-------------------AA-------TATATATAT------------------------------------------------------------------------------------------------------------ATATATA-TAATATAAATATTATATATTTATATA--TATATATATTATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT----------SizeHit CountTotal NormTotal
No Reads
droFic1
GAGT-TTTTA-------------------------------GTATTCA------AGTAAGCGAAA----------TGTCGGGACA----------TCTTTCC----TAGC-----A-AAAAAAGATTTTATTTCGATCGAAATATAAGTGTTCGAAAACAGCATTGGTTCTGAACAAAG-TTTTT--AGTATAAATAAATAAATTATAT-----------------------A------------------------------------------------------------------------------------------T------ATGTAG---------------------------------------------G-------------------------------------------------------------------------------------TAGGTTTACTCGC-GCGCTTT-AACGTAAACAAAC-TGTGAACTCGAAACATCGTTTAAAAAATAATTTAAATTTTACTGAAATACTGAATAAATTTCCTATCCTTACCATGTAC-------------------------------------ATTTA--------------------------------------------------------------------------------------TTTTCATAA----ATGTCTGA-------------------------------------------ATGTATCAATACGTAAATAC-AAACATACATACATATATAT-----------------------------------------------TTAAGTGTTTTGTTTTCAACCACAGATGTAGAC-ATTA------------------------------TAAGGTAATCAGCTTAATTTTAACCTTTGACAGC-GAGCTCATTTGCTCGA-------------------------TAGAA---AATATTT---TTTATTTTGTGTCAGATTATA-------------------------------------TGAATGTGTTGTTTCTGCTGATAAGCT--TTATGTCATTCAAT-TTCATTTCAGAAATTTGC-TGAGGTCGA-AATATAACTGTCAC---AAGAACATTAACTATGCGCCAGATAAGCGC----------SizeHit CountTotal NormTotal
No Reads
droKik1
CTAC-TTTCGTACAAAAGTTTGTGTGAAGTTTCCGTGTAACGTTCTTA------AATA----AAT----------CGCCAAATTCCGATTATTATTATTTTTTTTTCAGT-----T--------------------------------------------------------------TTACTTA--A------GAAGTTTTG----------------------------------------AAGTTT------TAATATCTAAACAATTTTTGAACCACTCAAAATAT------------------------------------------GTAAAAATA-------------------------------TATATATATA-----------------------------------------------------------------------------------------------------------------------TATATATA--TA---------------------------------------------------------------------------------------------------------------ATATA-------------------TA----------------------------------------------------------TATATATAT---------------------------------------------------------ATA---------------------TATATATA----TATATAT-------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ACGA-TTCTA-------------------------------GTTTGT-----------------------------------------------------------TAAT-----A-ACTAAAATTTTCAAAGTGATTTAAATTATA-------------------------------TTGTATG--A------AAG----TCTTATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGAATTTAAAAAATGATAAAAGTAATATTTAATTAAATACGTATAGTATTTGACAGATTTGAACATATTGGCGCACAA-CCT-----------------------ACAAGAGACTTATATATTTTGTTTTTTGTTTTTTTGTACAATAATCCATACGAGTCA-AATGTAATAATT--AAATACATG-TATA-------------------TA-------CACATGTACTCATTTGATTTTAAGGTGGAAGTATGGAATTTGTGATGTGCAT-----------------------------------------------------------------ATG-------------------TATGTATGTA----TGT------------------------------------------------------------------------------------ATA------------------------------CAACGTAATCAGCAAAAATATAGCCTTTGACATCTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAGATTTGAACATATTGGCGCACAA-C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
droBip1
TCAT-ATCTC-------------------------------GTT----------------------------------------------------------------------------AATACAC-------------------------------------------------------------------------ACT-----------------------TCAAAATTATATAACAAAAATTATTAATTAAATATAAA-----------------------------------------------------AATAT--------ATATAAATATA-------------------------------TA-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTATATAAATATATAAAATGTA-------TATAAATAT------------------------------------------------------------------------------------------------------------ATAAAAT-ATATATAAA-----------------------TATATAATATATATATAAATATA--------TAAAAT------------------------------------ATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------SizeHit CountTotal NormTotal
No Reads
dp5
TAT-ATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACATATA-------------------------------TATATGTATA-----------------------------------------------------------------------------------------------------------------------TATATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA--------TATAT------------------------------------------------------------------------------------------------------------------------------------ATATATGTATATGTATATAC-ATATATATGTACATATACATATC---------------------------------------------------------------------ATATA-GC-ACCA------------------------------CAACACAATCAGCTGA-ATATAACCTTTGGCT-CAGAGCCTACTG-TTCAG-GCGTTT----ATTGCGACCA-GAAACAAAAAAAACAACCGTTAGTGCT--------------------------------------TGTAGAAATATATTT----GTGCCGCTTTTGCTGATAAGATGCTTGTCTCATTGAAA-ATGTTTTTAGAAATGTAAGCAAAGTCTGTACGAAATCTGTTGATGGGGCGACGACAACTATGAGCCACACTTGCACACATTGACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATCTGTTGATGGGGCGACGACA..............................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-ATATAACCTTTGGCT-C........................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACGACAACTATGAGCC....................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACTATGAGCCACACTT..............2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGGGCGACGACAACTATGAG......................2311.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATCTGTTGATGGGGC.....................................1911.0010100000000
droPer2
TAA-GT---------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGA---GCACCACTGTAT--GTATATG-----------------------------------------------------TATAT--------ATGTACATATA-------------------------------TATATGTATA-----------------------------------------------------------------------------------------------------------------------TATATATA--TATA--------------------------------------------------------------------------TAT----------------------------------ATA-------------------TA-------TATATGTAT------------------------------------------------------------------------------------------------------------ATGTATGTATATGTATATAC-ATATATATGTACATATACATATC---------------------------------------------------------------------ATATA-GC-ACCA------------------------------CAACACAATCAGCTGA-ATATAACCTTTGGCT-CAGAGCCTACTG-TTCAG-GCGTTT----ATTGCGACCA-GAAACAAAAAAAACAACCGTTAGTGCT--------------------------------------TGTAGAAATATATTT----GTGCCGCTTTTGCTGATAAGATGCTTGTCTCATTGAAA-ATGTTTTTAGAAATGTAAGCAAAGTCTGTACGAAATCTGTTGATGGGGCGACGACAACTATGAGCCACACTTGCACACATTGACGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTACGAAATCTGTTGATGGGGCGA...................................2611.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATCTGTTGATGGGGC.....................................1911.001100000
droVir3
ACCA-TTGGG-------------------------------ATTTGTTTCTTTAGTTA-ATC---AAATAAACAAC--------------------------------AT-----TCA-TAA-----------------------TT-------------------------------T-GCTTCAAA------ATACGCATG----------------------------------------ACATTGCTATGT--TTAT-----------------------------------------------------------------------ATACATATG-------------------------------TATATGTATA-----------------------------------------------------------------------------------------------------------------------TATATTTG--TGTA--------------------------------------------------------------------------TGT----------------------------------ATA--------TGCATATATTGCATCTTGTATTT--G---------------------------------------------TATTTGTATAT----ATATCTATTTATATATGTAATAGACACCGAAAACCACATGTACATACATTCATGTTCT-GTATATAGATATTGTATATATATATA--TATATATTCTATGTG-------------------------------TAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT----------------------------------ATA--------TGCATATATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.251000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATATATATATA--TATA..............................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TAT-ATTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--T------ATATGTATATTATAT-----------------------A------------------------------------------------------------------------------------------T------ATGTAT---------------------------------------------A-------------------------------------------------------------------------------------TAAG----CTCCCGTAGCAATCAACATATATGTATGTATAAACCTGAAG-ATT----------------------------------------------------------------------------------------------------------ACA-------------------AA-------AATATATG----------------------------------------------------------------------------------------------------------CTTAA-TTAA-AAAAATATGTAAAATATATATATATA--TATGTATAATATAAATAAATAT----AACGACTCATAGAACATGCGTTGCATTCTAGTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGATATATATATATATATATTATATT-----------------------------------------------------------------------------------------------------------------------------TA---TATATTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATTATATATA-TATATTATATATATATATATATATTATA-------------------TA-------TACATATAT------------------------------------------------------------------------------------------------------------ATATATT-ATATTTAAATATTGTATATATATA----TATATATTATATATATATATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT----ATATTTTTTTT------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:08 PM