ID:

dsi_26581

 Coordinate:

3r:9452790-9452969 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_9452970_9453894_+]; CDS [3r_9452970_9453894_+]; exon [3r_9452664_9452789_+]; CDS [3r_9452664_9452789_+]; intron [3r_9452790_9452969_+]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGCGAAGCTGGGCAAGAATTCTGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGTTAGTGCCTGCTTTTGGTGAGGGGGATAGGGTGCCCCGTGTTGCGTGTGTACACGTAAATATTAACCCTCTAATGGCCAATTGTGGACCACTAGCTTATTTTTTGTATTTAGCTACATGATTTACGTTCATTATAAAATATATATCTAATAATCGTACCACCCACCCCAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTT
**************************************************.........(((((((.((((..((((((((((.(((((((...)))...(((((((....))))))).))))..))))).....)))))..))))..)))))))(((((...(((((........((((.......))))........)))))...)))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
.........TGGGCAAGAATTCTGCGGATCCGCCG..................................................................................................................................................................................................................................................... 26 0 1 3.00 3 0 3 0 0 0 0 0 0
.............CAAGAATTCTGCGGATCCGCC...................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0
...................................................................................................................................................................................................................................................TGGACTTCAAGAGCG...................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................TAAATTGTAGACCACTAGCTT........................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................AATTGTAGACCACTAGCTTT.......................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0
.........TGGGCAAGAATTCTGCGGATCCGCCGG.................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................TGCGCTGCTTTCTGGACTTCAAGAGC....................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................TCAAGAGCGGCGGTGGTCTGTGCATC..... 26 0 1 1.00 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................TGGACTTCAAGAGCGGCGGTGGTCTG........... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
.........TGGGCAAGAATTCTGCGGATCCGCCGGC................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................................................................................................AATTGTAGACCACTAGCTTAGA........................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................CAAATTGTAGACCACTAGCTTT.......................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................AAATTGTAGACCACTAGCTTC.......................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0
...............AGAATTCTGCGGATTC......................................................................................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 1 0
..........................................................................................................................................AATTGTAGACCACTAGCTTTA......................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
......AGATTGGCAAGAATACTGCG.............................................................................................................................................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0
....................................................................................................................................................CACTAGCTTCTTTCATGTA................................................................................................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 1
..GCGAAGATGGGCTAGA...................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTCGCTTCGACCCGTTCTTAAGACGCCTAGGCGGCCGTTGGTCTTAAGGCCAATCATAACAATCACGGACGAAAACCACTCCCCCTATCCCACGGGGCACAACGCACACATGTGCATTTATAATTGGGAGATTACCGGTTAACACCTGGTGATCGAATAAAAAACATAAATCGATGTACTAAATGCAAGTAATATTTTATATATAGATTATTAGCATGGTGGGTGGGGTCTACGCGACGAAAGACCTGAAGTTCTCGCCGCCACCAGACACGTAGTAGAA
**************************************************.........(((((((.((((..((((((((((.(((((((...)))...(((((((....))))))).))))..))))).....)))))..))))..)))))))(((((...(((((........((((.......))))........)))))...)))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................................................................GTACTAAATGCAAGTAATATT.................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
....CTTCGACCCGTTCTTAAGACG............................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
TTCGCTTCGACCCGTTCTTAA................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................................AAGTAATATTTCATATA............................................................................. 17 1 9 0.11 1 0 0 0 0 1 0
......................................................................................................................................................................................................................................................................ACCAGACTCGTAGGAGA. 17 2 10 0.10 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................................CCTGAAGTTGTCGGCGCTA................. 19 3 16 0.06 1 0 0 0 1 0 0
..........................................................................ACCAGTCCCGCTATCC.............................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1
....................................TTTGGTCTTAAGGCCTA................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:9452740-9453019 + dsi_26581 AAGCGAAGCTGGGCAAGAATTCTGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGTTAG--TGCCTGCT-TTT-GGT--------GAGGG-------------GGATAGGGTGCCCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCTAAT---------------------GGC-CAATT-GT-----------------------------------------GG--------------ACCACTAGC-----TTATTTTTTGTATTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------TC-ATT--A---TAA---------------------------------------------------------A------------------------------------------ATATATA---TCTAAT----AATC-------------------------------------GTAC------CA-------CCCACCCCAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTT
droSec2 scaffold_0:10160363-10160642 + AAGCGAAGCTGGGCAAGAATTCTGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGTTAG--TGGCTGCG-TTT-GGA--------GAGGG-------------GGATAGGGTGCTCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCTAAT---------------------GGC-CAATT-GT-----------------------------------------GG--------------ACCACTAGC-----TTATATTTTGTATTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------TC-ATT--A---TAA---------------------------------------------------------A------------------------------------------ATATATA---TCTAAT----AATC-------------------------------------GTAC------CA-------CCCACCCCAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTT
dm3 chr3R:11797971-11798250 - AAGCCAAGCTGGGCAAGAACTCAGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGATAG--TGCCTGTG-GTT-GGT--------GAGGG-------------GGACAGGGTGCCCCG---------TG--TTG------CGTGTGTACACGTAAATATTAATCCTCCAAT---------------------GGC-CAAAT-GTTT---------------------------------------GG--------------ACCACTAGC-----TTATATTTTGTATTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------AC-ATT--A-----A---------------------------------------------------------A------------------------------------------ACATATC---TCTAAT----AATC-------------------------------------GTAC------CA-------CCCACACCAGATGCGTTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATTTT
droEre2 scaffold_4770:11319490-11319794 - AAGCGAAGCTGGGCAAGAATTCAGCGGAGCCGCCGGCAACCAGAATTCCGGTTAGTATTGAATA--TGCCTGCG-GTG-GGT--------GAGGA-------------ATACAGGGTGCCCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCGAAT---------------------GGC-CTATT-GT-----------------------------------------AGTCGACA---CAACCACCACACGC-----AATTATTTCTTATTTAGCT-----------------------------------------------A------------------------------CG-TTGACCATGATTTAGGCTTAAG-T-------TT-ATT--A---T-----------------------------------------------------------A------------------------------------------ACATCTA---TCTAAT----AATT-------------------------------------TTAC------CA-CC---CACACCCACAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTT
droYak3 3R:14638702-14638984 + AAGCGAAGCTGGGGAAGAATTCAGCGGAGCCGCCGGCAACCAGAATTCCGGTTAGTATTGAATG--TGCCTGCG-GTG-GGT--------GAGGG-------------AGACAGGGTGCTCTG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCCAAT---------------------GGC-CAATT-GT-----------------------------------------AG----------------------CCTAACTTA-------------GAA-----------------------------------------------A------------------------------G--------ATATTCCC------CAC-CT-TTTTTTTATT--ATTATAAATATATTATTAT---------------------------------------------G------------------------------------------ATATATA---TCTAAT----AATG-------------------------------------TTAC------C----------ACCCACAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTT
droEug1 scf7180000409797:1738954-1739208 + AAGCGAAGTTGGGAAAGAATTCAGCAGAGCCACCGGCGACCAGAATTCCGGTTAGTATTGGT-G--TGTCTGTGTGTG-GGT--------GCGCA-------------GTACAGGGTGCCCCA---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTATGGT---------------------GGA-TAA-AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCATTA--------AT------GCTAGGAAGTAAATGGTTTTAGCTAATGCATCTTAA----TTT--T----TGCCTCCGCAGATGCGCTGCTTTCTAGACTTCAAGAGCGGCGGAGGCCTGTGCATCATCTT
droBia1 scf7180000302136:1406128-1406386 - AGGCGAAGCTGGGCAAGAATTCGCCGGAGCCGCCGGCCACCAGAATTCCGGTTAGTATTTGT-G--A-----------------------GCGCG-------------GTACAGGGTGCCCCT---------TG--TGG------CGTGTGTACACGTAAATATTAACCCCTCGGT---------------------GAC-CAA-GGGGTT----------------------------------------------------------AAGAGCC----------------------------------------------------------------------------------------------------------------------------------------------------------------A-----AGATTACTTGATTTT------------AGAAACCGTTTCTA-------------------------------------------ATTAATA---TTTATA----AA-------------------------------------TCTGTTTTAATTG--T----CTGCCCCACAGATGCGCTGCTTCCTCGACTTCAAGAGCGGCGGTGGCCTGTGCATCATCTT
droTak1 scf7180000415242:326893-327107 + AGGCGAAGCTGGGCAAGAATTCAGCGGAGCCGCCGGCGACCAGAATCCCGGTTAGTATTGGT-G--C-----------------------GCGCT-------------GCACAGGGTGCCCCG---------TGTGTTG------CGTGTGTACACGTAAATATTAACCCTGCAGT---------------------GGC-CAA-GGGG-----------------------------------------GT----------------------CTTATG-TT-------------ATGAGTTGCTAGAATTGTAGG---T-----------------------------------------------------------------------------------------------------------------TTGATGTAAGATTATTGGCTTTTTTTTCTCAATTT--------------A------------------------------------------ATATATA---TTTAAG----AA----------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491080:1584237-1584575 - AGGCCAAGCTGGGCAAGAATTCGGCGGAGCCGCCGGCAACCAGAATTCCGGTTAGTATTGGT-G--AGCCTGTGT-----GT--------GAAAG-------------CTACAGGGTGCCCAG---------TG--TTG------CGTGTGTACACGTAAATATTAACCTTCTCTT---------------------AGC-CAA-AGAG-----------------------------------------------------------------CTTAGT-TT-------------GTGATTAATTAGAAGTCTAGT---TCTAAAAG-----ACTTAT----------------------------------------------------------------------------------------------------------TTATTTGTTTAAATTTCTAAATTT--------------ATAAATAGTTTTGATTAAGTAAATTATTTTTAAAGACCCCATAAACTATA---GTT----TAAAA-------------------------------------TTTCGC------CTT-TGCTTTTCTATTTAGATGCGCTGCTTCCTCGACTTCAAGAGCGGCGGTGGCCTGTGTATCATCTT
droRho1 scf7180000779241:175154-175413 + AGGCCAAGCTCGGCAAGAATTCAGCGGAGCCGCCGGCGACCAGAATTCCGGTTAGTATTGCT-G--AGCCTGTG-------T--------GCGCG-------------GTACAGGGTGCTCTA---------TGT-TTA------CATGTGTACACGTAAATATTAACCCTCTCGT---------------------GGC-CAA-AGGG-----------------------------------------------------------------CTTAAT-TT-------------GTGACTTACTATAAAAATAGT---T---------------------------------------------------------------------------------------------------------CTTAAAAGTAA-------------------------------------------------------------------------------------------------AGT----A----AATT-------------------------------------GTAC------CCT-TGATCTCCGCTCCAGATGCGATGCTTCCTCGACTTCAAGAGCGGTGGCGGCCTGTGTATCATCTT
droFic1 scf7180000452523:1178010-1178339 - AGGCGAAGTTGGGAAAGAATTCAGCGGAGCCGCCGGCGACTAGGATTCCGGTTAGTATTTGT-G--TGCCTGAGT-----GT--------GCGTG-------------GTACAGGGTGACCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCTGGG---------------------GAA-AAA-AG-A-----------------------------------------GG----------------------CTTATC-TA-------------GACGGTTACTAATATTATAGTACCTTTAA---ACTCTAATAGTTTTAAATATTTCAGATTAGAGTCTATCCTCTTTAATTC------------------------------------T-AT-AAAAAGTAAC-------TTTT--------------------------------------------A------------------------------------------AAACAAA---TTA-------AC-------------------------------------TTACGC------TAT-TGT-TTTCTTCCCAGATGCGCTGTTTTCTCGACTTTAAAAGCGGCGGTGGCCTGTGCATCATCTT
droKik1 scf7180000302639:877592-877713 + AGGCGAAGCTCGGCAAGAATTCGGCGGAGCCGCCGGCGACAAGAATTCCGGTTGGTATTAGT-G--TGAATGTG-------T--------GCGTG-------------ATACAGGGTGCCCTG---------TG--TCG------CGTGTGTACACGTAAATATTAACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:16403353-16403614 - AGGCTAAGCTCGGGAAGAATTCGGCGGAGCCGCCGGCGACGAGAATTCCGGTTAGTGTTTCA-GTGTGTGTGTG-------TTAGTGTCTGCTGT-------------GTACAGGGTGGCCCA---------TG--TGT------CGTATGTACACGTAAATATTAACCCTCTACT---------------------TGGCCAG-TGGGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GAA-ATCAAATATG-TA-TGA-------CTGCTG---TT--------------------------------------------G------------------------------------------AAGTGCA---ATA--------ATTAATA---------------------------------TTC-------CT------TTCTCCCCCAGATGCGTTGCTTTCTGGACTTCAAGAGCGGTGGCGGACTGTGCATAATTTT
droBip1 scf7180000396708:3643465-3643711 + AGGCTAAGCTTGGCAAGAATTCAGCGGAGCCGCCGGCGACAAGAATTCCGGTTAGTGTTAGT-G--TGTGTGTG--T--GT-------CTGATGT-------------GTACAGGGTGCCCCA---------TG--TGT------CGTATGTACACGTAAATATTAACCCTCTACT---------------------TGC-TCAGCGGGACGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------------ATATAATTTG-TTTGA----------------------------------------------------------------------------------------------------------AAGAATA---CTG--------ATTAATA---------------------------------C-AC------CT------TCCTCCCTCAGATGCGTTGCTTCCTGGACTTCAAGAGCGGTGGCGGACTCTGCATAATCTT
dp5 2:20496624-20496881 - AGGCGAAGCTGGGCAAAAATTCGGCCGAGCCGCCGGCGACCAGAATTCCGGTTAGTAGTCGT-G--TG---------T-GGGGAGGGTGCTCTTT-------------GTACAGGGTGTTCTG---------TG--TA-CGTGTTCGTGTGTACATGCGAATATTATAATTTCGGG---------------------G-----------ATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG------GAT-ATTATATTTG-TG-GAA----------------------------------------------------------------------------------------------------------CGAGCAGCGTTA--------ATCGAAATG-----------------------------TCTTCC------CT-T----CCTCCCGTCAGATGCGTTGCTTTCTGGACTTTAAGAACGGCGGAGGTCTGTGCATCATCTT
droPer2 scaffold_3:3245160-3245417 - AGGCGAAGCTGGGCAAGAATTCGGCCGAGCCGCCGGCGACCAGAATTCCGGTTAGTAGTCGT-G--TG---------T-GGGGAGGGTGCTCTTT-------------GTACAGGGTGTTCTG---------TG--TA-CGTGTTTGTGTGTACATGCGAATATTATAATTTCGGG---------------------G-----------ATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG------GAT-ATTATATTTG-TG-GAA----------------------------------------------------------------------------------------------------------CGAGCAGCGTTA--------ATCGAAATG-----------------------------TCTTCC------CT-T----CCTCCCGTCAGATGCGTTGCTTTCTGGACTTTAAGAACGGCGGAGGTCTGTGCATCATCTT
droWil2 scf2_1100000004902:10693989-10694226 - dwi_2606 AGGCCAAGTTGGGTAAAAACTCGGTTGAGCCGCCGGCGACACGAATTCCGGTTAGTATGTGT-G--AGAGTGTGTGTGGGTA--------GATGGGGGTGAAAAGGCATGACAGGGTGTCTTG---------T---TTG------GGTGTTTACATAGAAAATTGAGACTATCATT---------------------GG--A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTTTTA--------AT------G-----------------------------TTTGCTTCGAATT--T----CTTTTCTCTAGATGCGGTGTTTTCTGGATTTTAAGAACGGCGGTGGACTTTGCATTATTTT
droVir3 scaffold_13047:2474085-2474244 - AGT----------------------------------GATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTCTAAC-----TTA-ATGTTGTATTTAAAT-----------------------------------------------A------------------------------T--------GTAATCTG------CAT-AT-ACATTTT-TT-AAATAGTAGCCAAAAGTTAAT--------------------------------------------G------------------------------------------AAAAATA---CTA--------ATA-------------------------------------A-------ATT--C----CCTTGTTGCAGATGCGCTGTTTTCTGGATTTCAAAAACGGTGGAGGTCTCTGCATAATTTT
droMoj3 scaffold_6540:15176658-15177026 + AAGCAAAATTGGGGAAAAACTCGGCAGAACCGCCGGCGACGAGAATCCCGGTAAGTGTA----------------------T--------TGGGG-------------GAACAGGGTGTTTTGGGTGTGCAAAATGTTT------TGTATGTACACGC----------GCGATAGAGATGCGCACTTGTAATATTTTTGA-GAG-AGGGACGAATGTTGATTTATTTATGCACGACCCTAAATAAATTGTATTTGAAAGCCAAATTATAATATAT-----AATTA------------------A-------------------------------TAAT----------TTAC----TTGTTTTTCTTTTTTATTTTTATTTGATCAATATTTTAA-TTATT-T-------AT-ATT--ATTATAAA----------------------------------------------------------------------------------------------------TATAT-------AATTC--TA-------------------------------------TTTTCC------CT-TT---AATTTTTTCAGATGCGTTGTTTTTTGGATTTCAAAAACGGTGGAGGGCTATGTATAATTTT
droGri2 scaffold_15074:6048506-6048627 - TAGTTT---TCTGCACGATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------GGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-A-------TC----------------GGTTG---AT--------------------------------------------A------------------------------------------ATGATCA---TTTATT----AATT-------------------------------------ATCG------TT-C----TCATCTTGTAGATGCGCTGTTTTCTGGATTTTAAAAACGGTGGTGGTCTCTGCATCATTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGCGAAGCTGGGCAAGAATTCTGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGTTAG--TGCCTGCT-TTT-GGT--------GAGGG-------------GGATAGGGTGCCCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCTAAT---------------------GGC-CAATT-GT-----------------------------------------GG--------------ACCACTAGC-----TTATTTTTTGTATTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------TC-ATT--A---TAA---------------------------------------------------------A------------------------------------------ATATATA---TCTAAT----AATC-------------------------------------GTAC------CA-------CCCACCCCAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........TGGGCAAGAATTCTGCGGATCCGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000030000000000
.............CAAGAATTCTGCGGATCCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTCAAGAGCG......................1511.00100000010000000000
.........TGGGCAAGAATTCTGCGGATCCGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCTGCTTTCTGGACTTCAAGAGC.......................2611.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCGGCGGTGGTCTGTGCATC.....2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTCAAGAGCGGCGGTGGTCTG...........2611.00100000000000010000
.........TGGGCAAGAATTCTGCGGATCCGCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
droSec2
AAGCGAAGCTGGGCAAGAATTCTGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGTTAG--TGGCTGCG-TTT-GGA--------GAGGG-------------GGATAGGGTGCTCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCTAAT---------------------GGC-CAATT-GT-----------------------------------------GG--------------ACCACTAGC-----TTATATTTTGTATTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------TC-ATT--A---TAA---------------------------------------------------------A------------------------------------------ATATATA---TCTAAT----AATC-------------------------------------GTAC------CA-------CCCACCCCAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................ATTCTGCGGATCCGCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.........................................................................G-TTT-GGA--------GAGGG-------------GGATAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTCAAGAGCGGCG...................1811.0010010
dm3
AAGCCAAGCTGGGCAAGAACTCAGCGGATCCGCCGGCAACCAGAATTCCGGTTAGTATTGATAG--TGCCTGTG-GTT-GGT--------GAGGG-------------GGACAGGGTGCCCCG---------TG--TTG------CGTGTGTACACGTAAATATTAATCCTCCAAT---------------------GGC-CAAAT-GTTT---------------------------------------GG--------------ACCACTAGC-----TTATATTTTGTATTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------AC-ATT--A-----A---------------------------------------------------------A------------------------------------------ACATATC---TCTAAT----AATC-------------------------------------GTAC------CA-------CCCACACCAGATGCGTTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................GTG-GTT-GGT--------GAGGG-------------GGACAGGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100010010000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCTGGACTTCAAGAG........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAGCGGATCCGCCGGCAACCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGCGGATCCGCCGGCAACCAGAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CCAAT---------------------GGC-CAAAT-GTTT---------------------------------------GG--------------A...............................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGTTGCTTTCTGGACTTC.............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTAGTATTGATAG--TGCCTGTG-GT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AAT-GTTT---------------------------------------GG--------------ACCACTAGC-----T.................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................ATCCGCCGGCAACCAGAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGAACTCAGCGGATCCGCCGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTTAGCT-----------------------------------------------A------------------------------C--------ATGATTTA------CG-T-------A..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAAGCTGGGCAAGAACTCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGTTGCTTTCTGGA.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................CCGCCGGCAACCAGAATTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTGGGCAAGAACTCAGCGGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGCCAAGCTGGGCAAGAACTCAGCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCAAGAACTCAGCGGATCCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGAACTCAGCGGATCCGCCGGCAACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTTTCTGGACTTCAAGAGCGG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGTTGCTTTCTGGAC................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCCAAGCTGGGCAAGAACTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATC-------------------------------------GTAC------CA-------CCCACACCAG..................................................2011.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCAAGAGCGGCGGTG................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...CCAAGCTGGGCAAGAACTCAGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCGGCGGTGGTCT............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
AAGCCAAGCTGGGCAAGAACTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAT----AATC-------------------------------------GTAC------CA-------CCCACACCA...................................................2311.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTCAGCGGATCCGCCGGCAACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAAGAACTCAGCGGATCCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTCTGGACTTCAAGAGCGGC....................2411.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAACTCAGCGGATCCGCCGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTTGCTTTCTGGACTTC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AG--TGCCTGTG-GTT-GGT--------GAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................GTG-GTT-GGT--------GAGGG-------------GGACAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................ACTCAGCGGATCCGCCGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCGGCGGTGGTCTGTGCC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............AAGAACTCAGCGGATCCGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GCCTGTG-GTT-GGT--------GAGGG-------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........TGGGCAAGAACTCAGCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAAGAACTCAGCGGATCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCGGCGGTGGTCT............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................TGCCTGTG-GTT-GGT--------GAGGG-------------GGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCTGGACTTCAAGAGCGGC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................CTCAGCGGATCCGCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................GGT--------GAGGG-------------GGACAGGGTGCCCCG---------TG--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGACTTCAAGAGCGGC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............CAAGAACTCAGCGGATCCGCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................ACTCAGCGGATCCGCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTCTGGACTTCAAGAGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCAAGAACTCAGCGGATCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................CCGGCAACCAGAATTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGGGCAAGAACTCAGCGGATCCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAGAGCGGCGGTGGTCTGT..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCGGCGGTGGTCTG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTCTGTGCATC.....1530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGCGAAGCTGGGCAAGAATTCAGCGGAGCCGCCGGCAACCAGAATTCCGGTTAGTATTGAATA--TGCCTGCG-GTG-GGT--------GAGGA-------------ATACAGGGTGCCCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCGAAT---------------------GGC-CTATT-GT-----------------------------------------AGTCGACA---CAACCACCACACGC-----AATTATTTCTTATTTAGCT-----------------------------------------------A------------------------------CG-TTGACCATGATTTAGGCTTAAG-T-------TT-ATT--A---T-----------------------------------------------------------A------------------------------------------ACATCTA---TCTAAT----AATT-------------------------------------TTAC------CA-CC---CACACCCACAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................TGCG-GTG-GGT--------GAGGA-------------ATACAGGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGACTTCAAGAGCGGC....................2111.0010100000
droYak3
AAGCGAAGCTGGGGAAGAATTCAGCGGAGCCGCCGGCAACCAGAATTCCGGTTAGTATTGAATG--TGCCTGCG-GTG-GGT--------GAGGG-------------AGACAGGGTGCTCTG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCCAAT---------------------GGC-CAATT-GT-----------------------------------------AG----------------------CCTAACTTA-------------GAA-----------------------------------------------A------------------------------G--------ATATTCCC------CAC-CT-TTTTTTTATT--ATTATAAATATATTATTAT---------------------------------------------G------------------------------------------ATATATA---TCTAAT----AATG-------------------------------------TTAC------C----------ACCCACAGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGTCTGTGCATCATCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACTTCAAGAGCGGCGG..................2111.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTTCTGGACTTCAAGAGC.......................2311.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGACTTCAAGAGC.......................1811.00110000000000
droEug1
AAGCGAAGTTGGGAAAGAATTCAGCAGAGCCACCGGCGACCAGAATTCCGGTTAGTATTGGT-G--TGTCTGTGTGTG-GGT--------GCGCA-------------GTACAGGGTGCCCCA---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTATGGT---------------------GGA-TAA-AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCATTA--------AT------GCTAGGAAGTAAATGGTTTTAGCTAATGCATCTTAA----TTT--T----TGCCTCCGCAGATGCGCTGCTTTCTAGACTTCAAGAGCGGCGGAGGCCTGTGCATCATCTTSizeHit CountTotal NormTotal
No Reads
droBia1
AGGCGAAGCTGGGCAAGAATTCGCCGGAGCCGCCGGCCACCAGAATTCCGGTTAGTATTTGT-G--A-----------------------GCGCG-------------GTACAGGGTGCCCCT---------TG--TGG------CGTGTGTACACGTAAATATTAACCCCTCGGT---------------------GAC-CAA-GGGGTT----------------------------------------------------------AAGAGCC----------------------------------------------------------------------------------------------------------------------------------------------------------------A-----AGATTACTTGATTTT------------AGAAACCGTTTCTA-------------------------------------------ATTAATA---TTTATA----AA-------------------------------------TCTGTTTTAATTG--T----CTGCCCCACAGATGCGCTGCTTCCTCGACTTCAAGAGCGGCGGTGGCCTGTGCATCATCTTSizeHit CountTotal NormTotal
No Reads
droTak1
AGGCGAAGCTGGGCAAGAATTCAGCGGAGCCGCCGGCGACCAGAATCCCGGTTAGTATTGGT-G--C-----------------------GCGCT-------------GCACAGGGTGCCCCG---------TGTGTTG------CGTGTGTACACGTAAATATTAACCCTGCAGT---------------------GGC-CAA-GGGG-----------------------------------------GT----------------------CTTATG-TT-------------ATGAGTTGCTAGAATTGTAGG---T-----------------------------------------------------------------------------------------------------------------TTGATGTAAGATTATTGGCTTTTTTTTCTCAATTT--------------A------------------------------------------ATATATA---TTTAAG----AA----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGGCCAAGCTGGGCAAGAATTCGGCGGAGCCGCCGGCAACCAGAATTCCGGTTAGTATTGGT-G--AGCCTGTGT-----GT--------GAAAG-------------CTACAGGGTGCCCAG---------TG--TTG------CGTGTGTACACGTAAATATTAACCTTCTCTT---------------------AGC-CAA-AGAG-----------------------------------------------------------------CTTAGT-TT-------------GTGATTAATTAGAAGTCTAGT---TCTAAAAG-----ACTTAT----------------------------------------------------------------------------------------------------------TTATTTGTTTAAATTTCTAAATTT--------------ATAAATAGTTTTGATTAAGTAAATTATTTTTAAAGACCCCATAAACTATA---GTT----TAAAA-------------------------------------TTTCGC------CTT-TGCTTTTCTATTTAGATGCGCTGCTTCCTCGACTTCAAGAGCGGCGGTGGCCTGTGTATCATCTTSizeHit CountTotal NormTotal
No Reads
droRho1
AGGCCAAGCTCGGCAAGAATTCAGCGGAGCCGCCGGCGACCAGAATTCCGGTTAGTATTGCT-G--AGCCTGTG-------T--------GCGCG-------------GTACAGGGTGCTCTA---------TGT-TTA------CATGTGTACACGTAAATATTAACCCTCTCGT---------------------GGC-CAA-AGGG-----------------------------------------------------------------CTTAAT-TT-------------GTGACTTACTATAAAAATAGT---T---------------------------------------------------------------------------------------------------------CTTAAAAGTAA-------------------------------------------------------------------------------------------------AGT----A----AATT-------------------------------------GTAC------CCT-TGATCTCCGCTCCAGATGCGATGCTTCCTCGACTTCAAGAGCGGTGGCGGCCTGTGTATCATCTTSizeHit CountTotal NormTotal
No Reads
droFic1
AGGCGAAGTTGGGAAAGAATTCAGCGGAGCCGCCGGCGACTAGGATTCCGGTTAGTATTTGT-G--TGCCTGAGT-----GT--------GCGTG-------------GTACAGGGTGACCCG---------TG--TTG------CGTGTGTACACGTAAATATTAACCCTCTGGG---------------------GAA-AAA-AG-A-----------------------------------------GG----------------------CTTATC-TA-------------GACGGTTACTAATATTATAGTACCTTTAA---ACTCTAATAGTTTTAAATATTTCAGATTAGAGTCTATCCTCTTTAATTC------------------------------------T-AT-AAAAAGTAAC-------TTTT--------------------------------------------A------------------------------------------AAACAAA---TTA-------AC-------------------------------------TTACGC------TAT-TGT-TTTCTTCCCAGATGCGCTGTTTTCTCGACTTTAAAAGCGGCGGTGGCCTGTGCATCATCTTSizeHit CountTotal NormTotal
No Reads
droKik1
AGGCGAAGCTCGGCAAGAATTCGGCGGAGCCGCCGGCGACAAGAATTCCGGTTGGTATTAGT-G--TGAATGTG-------T--------GCGTG-------------ATACAGGGTGCCCTG---------TG--TCG------CGTGTGTACACGTAAATATTAACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGGCTAAGCTCGGGAAGAATTCGGCGGAGCCGCCGGCGACGAGAATTCCGGTTAGTGTTTCA-GTGTGTGTGTG-------TTAGTGTCTGCTGT-------------GTACAGGGTGGCCCA---------TG--TGT------CGTATGTACACGTAAATATTAACCCTCTACT---------------------TGGCCAG-TGGGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GAA-ATCAAATATG-TA-TGA-------CTGCTG---TT--------------------------------------------G------------------------------------------AAGTGCA---ATA--------ATTAATA---------------------------------TTC-------CT------TTCTCCCCCAGATGCGTTGCTTTCTGGACTTCAAGAGCGGTGGCGGACTGTGCATAATTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCTGGACTTCAAGAGCGGTGGCGG...............2811.001000010
...............................GCCGGCGACGAGAATTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.....................................................................................................................................................................AACCCTCTACT---------------------TGGCCAG-TGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAGAGCGGTGGCGGACTGTGCATA.....2811.001010000
droBip1
AGGCTAAGCTTGGCAAGAATTCAGCGGAGCCGCCGGCGACAAGAATTCCGGTTAGTGTTAGT-G--TGTGTGTG--T--GT-------CTGATGT-------------GTACAGGGTGCCCCA---------TG--TGT------CGTATGTACACGTAAATATTAACCCTCTACT---------------------TGC-TCAGCGGGACGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------------ATATAATTTG-TTTGA----------------------------------------------------------------------------------------------------------AAGAATA---CTG--------ATTAATA---------------------------------C-AC------CT------TCCTCCCTCAGATGCGTTGCTTCCTGGACTTCAAGAGCGGTGGCGGACTCTGCATAATCTTSizeHit CountTotal NormTotal
No Reads
dp5
AGGCGAAGCTGGGCAAAAATTCGGCCGAGCCGCCGGCGACCAGAATTCCGGTTAGTAGTCGT-G--TG---------T-GGGGAGGGTGCTCTTT-------------GTACAGGGTGTTCTG---------TG--TA-CGTGTTCGTGTGTACATGCGAATATTATAATTTCGGG---------------------G-----------ATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG------GAT-ATTATATTTG-TG-GAA----------------------------------------------------------------------------------------------------------CGAGCAGCGTTA--------ATCGAAATG-----------------------------TCTTCC------CT-T----CCTCCCGTCAGATGCGTTGCTTTCTGGACTTTAAGAACGGCGGAGGTCTGTGCATCATCTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................ATTCGGCCGAGCCGCCGGCGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGGAGGTCTGTGCATCATC..2411.0010001000000
..............AAAAATTCGGCCGAGCCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
AGGCGAAGCTGGGCAAGAATTCGGCCGAGCCGCCGGCGACCAGAATTCCGGTTAGTAGTCGT-G--TG---------T-GGGGAGGGTGCTCTTT-------------GTACAGGGTGTTCTG---------TG--TA-CGTGTTTGTGTGTACATGCGAATATTATAATTTCGGG---------------------G-----------ATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG------GAT-ATTATATTTG-TG-GAA----------------------------------------------------------------------------------------------------------CGAGCAGCGTTA--------ATCGAAATG-----------------------------TCTTCC------CT-T----CCTCCCGTCAGATGCGTTGCTTTCTGGACTTTAAGAACGGCGGAGGTCTGTGCATCATCTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........CTGGGCAAGAATTCGGCCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droWil2
AGGCCAAGTTGGGTAAAAACTCGGTTGAGCCGCCGGCGACACGAATTCCGGTTAGTATGTGT-G--AGAGTGTGTGTGGGTA--------GATGGGGGTGAAAAGGCATGACAGGGTGTCTTG---------T---TTG------GGTGTTTACATAGAAAATTGAGACTATCATT---------------------GG--A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTTTTA--------AT------G-----------------------------TTTGCTTCGAATT--T----CTTTTCTCTAGATGCGGTGTTTTCTGGATTTTAAGAACGGCGGTGGACTTTGCATTATTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAAGAACGGCGGTGGA..............1911.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGGTGGACTTTGCAT......2111.00101000
..............AAAAACTCGGTTGAGCCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................GTATGTGT-G--AGAGTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.20100010
droVir3
AGT----------------------------------GATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTCTAAC-----TTA-ATGTTGTATTTAAAT-----------------------------------------------A------------------------------T--------GTAATCTG------CAT-AT-ACATTTT-TT-AAATAGTAGCCAAAAGTTAAT--------------------------------------------G------------------------------------------AAAAATA---CTA--------ATA-------------------------------------A-------ATT--C----CCTTGTTGCAGATGCGCTGTTTTCTGGATTTCAAAAACGGTGGAGGTCTCTGCATAATTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTTCAAAAACGGTGGAG................2011.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGATTTCAAAAACGGTGGAGGTC.............2711.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGCTGTTTTCTGGATT...............................2011.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGCTGTTTTCTGGAT................................1911.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACGGTGGAGGTCTCTGCA.......2211.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGATTTCAAAAACGGTGG..................2211.001000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATTTCAAAAACGGTG...................1911.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
AAGCAAAATTGGGGAAAAACTCGGCAGAACCGCCGGCGACGAGAATCCCGGTAAGTGTA----------------------T--------TGGGG-------------GAACAGGGTGTTTTGGGTGTGCAAAATGTTT------TGTATGTACACGC----------GCGATAGAGATGCGCACTTGTAATATTTTTGA-GAG-AGGGACGAATGTTGATTTATTTATGCACGACCCTAAATAAATTGTATTTGAAAGCCAAATTATAATATAT-----AATTA------------------A-------------------------------TAAT----------TTAC----TTGTTTTTCTTTTTTATTTTTATTTGATCAATATTTTAA-TTATT-T-------AT-ATT--ATTATAAA----------------------------------------------------------------------------------------------------TATAT-------AATTC--TA-------------------------------------TTTTCC------CT-TT---AATTTTTTCAGATGCGTTGTTTTTTGGATTTCAAAAACGGTGGAGGGCTATGTATAATTTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TAGTTT---TCTGCACGATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------GGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-A-------TC----------------GGTTG---AT--------------------------------------------A------------------------------------------ATGATCA---TTTATT----AATT-------------------------------------ATCG------TT-C----TCATCTTGTAGATGCGCTGTTTTCTGGATTTTAAAAACGGTGGTGGTCTCTGCATCATTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:04 AM