ID:

dsi_26564

 Coordinate:

2r:9483739-9483888 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -3.3

Flybase annnotation

exon [2r_9483889_9486761_+]; five_prime_UTR [2r_9483889_9484185_+]; intron [2r_9481958_9483888_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTGTAAACAAAAACAATCGTACGAGATTAGCAAATAACGTCCATTTAAATAATCCCACACGCACACCACTACGATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACGTAATTGTCGATTCGCCTGATTTAAGACTAATTTTTACTAATTTGCCACGGTTCCGGCTTTTGTTTGTTTCCACCTCTCATTTCTCTCCAGGATTCCCTAAACGCAAGGCCGTACCCAGTGTGACGTAACGAAACGGAGAG
***********************************************************************************************************************....(((.((.........((((......)))).........)).))).....****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
 O001
Testis
 GSM343915
embryo
......................................................................................................................................................................................................................AAGGCCGTACCCAGTGTGA................. 19 0 1 2.00 2 0 1 0 0 0 0 0 0 1
.......................................................................................................................ATTCGCCTGATTTAAGAC................................................................................................................. 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGTGTGACGTAACGAAACG..... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGTGTGACGTAACGA......... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCCGTACCCAGGGTTCCGTA............. 20 3 1 1.00 1 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................ACCCAGTGTGACGTAACGAAACGGAGA. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGTGTGACGTAACGAA........ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TTGCCACGGTTCCGGCTTTTG.............................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................GACGTAACGAAACGGA... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AAAGGATTCCATAAACGCAAGGCC.............................. 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CTCTCATTTCTCTCCAGGAT............................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................ACCCAGTGTGACGTAACGAAACGG.... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...................................................................................................................GTCGATTCGCCTGATTTA..................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................TACCCAGTGTGACGTAACGAAACGGAG.. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCCATTGTGACGTAACGAAACGGA... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................AATTTGCCAGGTTTGCGGCTT................................................................................. 21 3 4 0.25 1 0 0 0 1 0 0 0 0 0
.............................................................................AGTTTTCTTCCGTATTTTTATCA...................................................................................................................................................... 23 3 5 0.20 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GTCGTACTCAGTGTGA................. 16 2 17 0.06 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................CCGGCTTTTGTATGT......................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TCACATTTGTTTTTGTTAGCATGCTCTAATCGTTTATTGCAGGTAAATTTATTAGGGTGTGCGTGTGGTGATGCTAGTCAAAAGAAAACATAAAAACAGTGTTAACATGCATTAACAGCTAAGCGGACTAAATTCTGATTAAAAATGATTAAACGGTGCCAAGGCCGAAAACAAACAAAGGTGGAGAGTAAAGAGAGGTCCTAAGGGATTTGCGTTCCGGCATGGGTCACACTGCATTGCTTTGCCTCTC
******************************************************************************....(((.((.........((((......)))).........)).))).....*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................................................................................................................TGGAGAGTACAGAGA...................................................... 15 1 3 2.33 7 0 3 3 1 0 0 0 0
..................................................................................................................................................................................ATGTGGAGAGTACAGAGA...................................................... 18 2 2 1.50 3 0 2 1 0 0 0 0 0
...................................................................................................TGTTAAGATGCATTAACGG.................................................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................TATGGGTCACACTGCATTGCTTTG...... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTCCGGCATGGGTCACACTGC............... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................AAACGATGCCGAGGCTGAAAA............................................................................... 21 3 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................CGGCATGGGTCACACTGCATT............ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGGGTCACACTGCATTGCTT........ 21 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................ACAAACAAAGGTGAATAGTA............................................................ 20 2 4 0.25 1 0 0 0 0 0 0 1 0
.........................................................................................................................................................CGGTGCCGAGGCTGAAAA............................................................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0
....................................................................TGATGCTAGCCGAAAGA..................................................................................................................................................................... 17 2 9 0.22 2 0 0 1 0 0 0 0 1
...........................................................................................AAAAAAAGTGTTAACATTCA........................................................................................................................................... 20 2 6 0.17 1 0 0 0 1 0 0 0 0
.............................................................................................................................................AAAATGATTAGACGG.............................................................................................. 15 1 9 0.11 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................ATGTGGAGAGTAAAGGGA...................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 1
...................................................................................................................................................................................TGTGGAGAGTACAGAGA...................................................... 17 2 11 0.09 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................AAACAAAGGTCCAGAGTAC........................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0
..............................CGTTCATTGCAGGTGAT........................................................................................................................................................................................................... 17 3 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:9483689-9483938 + dsi_26564 AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTAGCAAATAACGTC---CATTT-AAATAA-T----------C-CC-----AC------A-------------------CG----CACACCACTAC---GATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA----TTGTC--GATT-CGCCTG----ATTTAAGACTAAT-----------------------------------------------------------------------------TTTTACTAATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------TTTC--CACCTC------------------TCATT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCGT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAG
droSec2 scaffold_1:6320922-6321171 + AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTAGCAAATAACGTC---CATTT-AAATAA-T----------C-CC-----AC------A-------------------CG----CACACCACTAC---GATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA----TTGTC--GATT-CGCCTG----ATTTAAGACTAAT-----------------------------------------------------------------------------TTTTATTAATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------TTTC--CACCTC------------------TCATT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCGT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAG
dm3 chr2R:8805305-8805549 + AGTGTAA----------ACAAAAAC---------------------------AATCGG----------ACGAG---ATTAGCAAATAACGTC---CATTT-AAATAA-T----------C-CC-----AC------A-------------------CG----CACACCACTAG---GATCACTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA----TTGTT--GATT-CGTCTG----ATTCT--------------------------------------------------------------------------------C--ATTTTTATTAATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------TTTC--CTCCTC------------------CCATT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAG
droEre2 scaffold_4845:17018717-17019009 - AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTTGCAAGTAACGTC---CATTA-AAATAA-C----------C-CC-----AC------A-------------------CT----CACACCACCAG---AATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA--AATAGTT--AATT-CGTCTG----ATCGTACATTCAT-TTTCGTGTACCC--TATATA--TTTTAGTCTT-TCCTATCACT----------------------------T-TTTTTTTATTAACTTGCCACGGTT---TCGGCTTTTC-C-----TG-----------------------------TTTC--CCCATC------------------CGGTT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAG
droYak3 2R:8164538-8164835 - AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTTGCAAGTAACGTC---CATTT-AAATAA-T----------CCCC-----AC------A-------------------CG----CACACCACTGG---CATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA--TATAGTT--GATT-CGTCTG----ATCGTAGATTCATTTTTCGTGTACCC--TGTATA--TTTTAGCCTT-TCATATTCTTA-TC---A--------------------C--TTTTTTATTAACTTGCCACGGTT---CCGGCCTTTC-C-----TG-----------------------------TTTC--CCCATC------------------CGATT------T---------------CTCCACAGGATTCCC----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAG
droEug1 scf7180000409672:3828185-3828490 - AGTGTAA----------ACAAAAAC---------------------------AATCGT----------TTGGG---ATTTGTAATTTACGACGATCATTTAAAATAA-T----------C-CC-----ACT-----T-------------------AG----CACATACATACATATATCAGTTTTCTTTTGTATTTTTGTCATACATGTACG--------------TAT--TATAGTT--GAAT-CGTCTA----GTCCTAGATTCATTTTTCGTGTACCC--TGTATAT-TTTTAGTCTT-TCCTATTCTTA-AC---T--------------------T-TTCTTTTATTAATT--CCACGGTT---TCGGCCTCTC-C-----TG-----------------------------TTTC--CCCCAC----------------A-CGATT------A---------------CTCCCCAGGATTCCC----TAAACGAAAAGCAAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAG
droBia1 scf7180000302292:1850257-1850549 + AGTGTAA----------ACAAAAAC---------------------------AATCGT----------TCGAG---ATTTGCAATTTACGGT---CGTAT-AAATAA-T----------C-CC-----ACTCAC--T-------------------GG----CACGTCGTCGC---CATCAGTTTTCCTTTGTAGTTTTGTCACAATTGTACG--------------CAG--TATAGTT--GATT-CGTCTG----GTCCTAGATTTATTTTTCGTGTAACC--TGTATA--TTTTAGTCTT-TCCTATTATCT---------------------------CTTTTTTTTACTAACTTGCCACGGTT---GCGGCTTCTC-C-----TG-----------------------------TTTC--CACCTC------------------CGGTT------T---------------CTCTGCAGGATTCCC----TAAGCGCAAGGCGAT-AC-CA-------GT-------GTGACGTAAC-------GAGAG
droTak1 scf7180000415762:330614-330890 - AGTGTAA----------ACAAAAAC---------------------------AATCGC----------TGGAG---ATTTGCAATTTA------------------A-A----------C-CC-----AC------T-------------------CG----CACATCATCAT---CATCAGTTTTCCTTTGTATTTTTGTCACAGTTGTACG--------------TAA--TATAGTT--GATT-CGTCTG----GTCGTAGATTTATTTTTCGTGTAACC--TGTATA--TTTTAGTCTT-TCCTATTATCT---------------------------C-CTTTTTTATTAACTTGCCACGGTTTC-CCGGCTTCTC-C-----TG-----------------------------TTTC--CCCCTC------------------CGATT------T---------------CTCCGCAGGATTCCC----CCAACGCAAGGCCAT-AACCA-------GT-------GTGACGTAAC-------GAGCG
droEle1 scf7180000491215:239317-239603 - AGTGTAA----------ACAAAAAC---------------------------AATCAT----------TTGTG---ATTTGTTATTTAAAGC--TTAT-T-AA---A-T----------C-CC-----TC------T-------------------GG----CAC------------ATCACCTTTATTTTGTATTGTTGTCACAATTGTACG--------------TAA--TATAGTT--GATT-CGTCTG----GTCCTAGATTT--TTTTCGTGTACTC--TGTATA--T-TTAGTCTTTTTCTATTCTTT-TC---T--------------------C--TTCTTTATTAACTTGCAACGGTGGC-CTGGTCTATC-C-----CG-----------------------------TTTT--TA---C------------------CGATT------T---------------CTCTGCAGGATTTCCCGCGAAAACGTAAGGCAAT-ACCCA-------GT-------GTGACGTAACCGAAACGGAGAG
droRho1 scf7180000779957:92168-92459 - AGTGTAA----------ACAAAAAC---------------------------AATCTT----------TCGGA---ATTTGTAATCTACTGC---CAATT-AA---A-T----------C-CC-----AC------T-------------------GGTAGGCA------------CATCAGTTTTCTTTTGTATTTTTGTCACAGTTGTACG--------------TAA--TATAGTT--AATT-CGTCTG----GTCCTAGATTT--TTTTCGTGTACCC--TGTATA--TTTTAGTCTT-TTCTATTCTTA-TC---T--------------------C--TTCTTTATTAACTGGTCACGGTTATACCGGCCTATC-C-----TG-----------------------------TTTC--TC---C------------------CGATT------T---------------CCCTTCAGGATTCCCCGCGAAAACGTAAGGCAAT-ACCCA-------GT-------GTGACGTAACCGAAACGGAGAG
droFic1 scf7180000454066:473931-474228 - AGTGTAA----------ACAATAAC---------------------------AATCGC---------CTCGAG---AT-CGTAATTTACGGC---CGTTG-AAATAA-T----------CTCC-----GCC-----T-------------------TG----CCCA----------CATCAGTTTTCTTTTGTGTTTTTGTCACAATTGAACG--------------TAATATATAGTT--GACT-CGTCTG----GTCCAAGATTTTTTTTTCGTCTACTCCCTGTATA--TTTTAGTCTT-TTCTATTCTCA-TC---C--------------------T-TTTTTGTATTAACTTGTAACGGTTT--TCGGATTCT--C-----TG-----------------------------TTTTCCC---AC------------------CGATT------T---------------CTCTGCAGGATTCCC---CGAAACGCAAGGCAATTACCCA-------GT-------GTGACGTAAC-GTAACGGAGAG
droKik1 scf7180000302670:231846-232188 + ATTGTAA----------ACAAAAGC--AGGCACTTACAAAACACACACATGT-AACAT------CCGATCGAG---AT-------------G--TT-TTT-AAA----TTGCGGTAGCTT-ACATGCAGTC-----AT---GC------TCAAACAAGGGGT---------CC---GATCAGTTTACGTGTATATTCTTGTCATTATTGTATG--------------TAA--TACAGTT--AGTTCCGTCTG----GTCCTATATTT-TCGCTCGTGTAATC--TGTATA--TTTTAGTCTTTTTCTATTTTCT-TG---A--------------------C--CGCTTTATTAATTCACCACTCTTC--CACGCCTCT--------TG-----------------------------TTTTCCCCCCTC------------------C----------G---------------CCATCCAGGATTCCC---ATATACGCAAGGCAAT-ACCGATACCCGAGTGTGTGAAGTGACGTAAC-TAAACGGAGAG
droAna3 scaffold_13266:6273184-6273566 + TATTCAG----------AGACAAAC---------------------------AAACAT----------CCGAGAAGATCAGTCATTCT---------TTC-AGATA-----C---------AGATACAGAT-ACAAATACAGA------TCACACTTGG--------AATTGT---AATCAAATTTCTTTTGTATTGCTGTCACAATTGTACG--------------TAA--GATAGTT--AATT-CGTCTG----GTCCTAGATCT---TTTCGTGTACTC--TGTATATATTTTAGTCTT-TCCTACTCTTT-GC----CTACCGCACAGTTGCCTCTT-TTTTTTTTATTTATTA------------------------AATAC---TTGCCCCCCCCGACTCCGTCTCCCATTGTTTC--AACTCCCTTACTTATCTATATCACTTGTCTCTCTCCCACACACACACACACACATACAGGATTCCCC-CACATACGCAAGGCAGC-CCCAA-------GT-------GTAACGTATC-GTGACGGAGAG
droBip1 scf7180000395839:430303-430658 + --TGTAA----------ACAAAAACCCAGGCACTGCCAG-----AGACAAGCAAACAT------CCG-ACAAG---ATCAGTTATTCTCAGA---TATTC-AGATAC-T----------C-AGATTCAGAT-ACAGATACACAACACAATCAGACTGG-----------------------CATTTCTTTTATATTCCTGTCACAATTGAACG--------------TAAGATATAGTTATAACT-CGTGTGATCGGTCCTAGATTC---TTTCGTGTACTC--TGTATA--TTTTAGTCTT-TCCTACTCTTT-GC----CTACCG---------------------------------CACAGTT------GCCTCT--------TTTTTTCCCCCCCGGATTCCGTCTCTCA---TTTA--CTATAC----------------ACATCTCTCTCGTC---------------CTGTACAGGATTCCC---ACATACGCAAGGCAAC-CCCAA-------GT-------GTGACGTATC-GTGACGGAGAG
dp5 3:14330784-14331042 + GGTGCAACAGTTATGTGGCGAAAAT---------------------------AACTGTAATTACTGTGTGGAG---AC-----------------TAT-----ATATCT----------C-CT-----AT------A-------------------AGTGAG---------GC---GATTAGTTTTCCTGTACATTTGTGTCACAAT---ACGAGCTAGTGCTAGCGTAA------------------------------------------------GCTC--TGAATA-----CAGTCTA-TTTGATCCCTTCTCCCAA--------------------G--TCGGTTATAAATTTGTTTTGATT---TTGGTTCCC--AAA-------------------TTC---------------T-------T------------------TCATT----GCT---------------TGACACAGGACTTCC---ATATACGCAAGGCAGC--CCAA-------GT-------GTAAC------GGAACTGAGAG
droPer2 scaffold_4:986927-987185 - GGTGCAACAGTTATGTGGCGAAAAT---------------------------AACTGTAATTACTGTGTGGAG---AC-----------------TAT-----ATATCT----------C-CT-----AT------A-------------------AGTGAG---------GC---GATTAGTTTTCCTGTACATTTGTGTCACAAT---ACGAGCTAGTGCTAGCGTAA------------------------------------------------GCTC--TGAATA-----CAGTCTA-TTTGATCCCTTCTCCCAA--------------------G--TCGGTTATAAATTTGTTTTGATT---TTGGTTCCC--AAA-------------------TTC---------------T-------T------------------TCATT----GCT---------------TGACACAGGACTTCC---ATATACGCAAGGCAGC--CCAA-------GT-------GTAAC------GGAACTGAGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTAGCAAATAACGTC---CATTT-AAATAA-T----------C-CC-----AC------A-------------------CG----CACACCACTAC---GATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA----TTGTC--GATT-CGCCTG----ATTTAAGACTAAT-----------------------------------------------------------------------------TTTTACTAATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------TTTC--CACCTC------------------TCATT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCGT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCGT-ACCCA-------GT-------GTGA..................1912.00200000001000100000
..................................................................................................................................................................................................................................................ATT-CGCCTG----ATTTAAGAC................................................................................................................................................................................................................................................................................................1812.00220000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAACG.....1911.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GA.........1511.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCA-------GT-------GTGACGTAAC-GAAACGGAGA.2711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAA........1611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................TTGCCACGGTT---CCGGCTTTTG.............................................................................................................................................................................2111.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTAAC-GAAACGGA...1611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTC------------------TCATT------T---------------CTCTCCAGGAT...................................................................2011.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCA-------GT-------GTGACGTAAC-GAAACGG....2411.00100000000100000000
............................................................................................................................................................................................................................................GTC--GATT-CGCCTG----ATTTA....................................................................................................................................................................................................................................................................................................1811.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-GAAACGGAG..2711.00100000001000000000
droSec2
AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTAGCAAATAACGTC---CATTT-AAATAA-T----------C-CC-----AC------A-------------------CG----CACACCACTAC---GATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA----TTGTC--GATT-CGCCTG----ATTTAAGACTAAT-----------------------------------------------------------------------------TTTTATTAATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------TTTC--CACCTC------------------TCATT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCGT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAACGGA...2411.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCA-------GT-------GTGACGTAAC-GAA........2011.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAACGGAGA.2311.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGT-ACCCA-------GT-------GTGACGT...............2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGCCGT-ACCCA-------GT-------GT....................1911.0010010
dm3
AGTGTAA----------ACAAAAAC---------------------------AATCGG----------ACGAG---ATTAGCAAATAACGTC---CATTT-AAATAA-T----------C-CC-----AC------A-------------------CG----CACACCACTAG---GATCACTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA----TTGTT--GATT-CGTCTG----ATTCT--------------------------------------------------------------------------------C--ATTTTTATTAATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------TTTC--CTCCTC------------------CCATT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCAT-ACCCA-------GT-------GTGACGT...............22131.00310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089806000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTGACGTAAC-GAAACGGAGA.2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAT-ACCCA-------GT-------GTGACGTAAC-...........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................C--CTCCTC------------------CCATT------T---------------CTCTCCAGT.....................................................................2214.0040000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGTAAC-GAAACGGAGA.2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAA.......2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAT-ACCCA-------GT-------GTGACGTAAC-GA.........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAACGGAGA.2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAACGGAG..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------GT-------GTGACGTAAC-GAAACGGAG..2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAACGGAGA.2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-GAAACGGA...2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------GT-------GTGACGTAAC-GAAA.......1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------GT-------GTGACGTAAC-GAAACG.....2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-G..........2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGCCAT-ACCCA-------GT-------GT....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCC----TAAACGCAAGGCC..............................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGA.2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------GT-------GTGACGTAAC-GAAACGG....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................GTC---CATTT-AAATAA-T----------C-CC-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAT-ACCCA-------GT-------GTGACGTAAC-GA.........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-ACCCA-------GT-------GTGACGTAAC-...........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCC----TAAACGCAAGGCCAT-AC.........................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGTAAC-GAAACGGA...1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000
.....AA----------ACAAAAAC---------------------------AATCGG----------ACGAG---ATTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCC----TAAACGCAAGGC...............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGTAAC-GAAACGGAG..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................T-----TG-----------------------------TTTC--CTCCTC------------------CCATT------T---------------CTCTCCAG......................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GAAAC......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAACGGA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................TTATTAATTTGCCACGGTT---CC.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAACGGAGAG2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAAGGCCAT-ACCCA-------GT-------GTGACG................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------GT-------GTGACGTAAC-GAAACGGAGA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGGCCAT-ACCCA-------GT-------GTGACGT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCC----TAAACGCAAGGCCAT-A..........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGTAAC-GAAACGGAGC.1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTGACGTAAC-GAAACGGAGAG2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCC----TAAACGCAAG.................................................1911.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAAAAAC---------------------------AATCGG----------ACGAG---ATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC--CTCCTC------------------CCATT------T---------------CTCTCCA.......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCC----TAAACGCAAGGCCAT-...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................C-CC-----AC------A-------------------CG----CACACCACTAG---G........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAT-ACCCA-------GT-------GTGACGTAAC-...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCA-------GT-------GTGACGTAAC-GAAACGGAG..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATTTGCCACGGTT---CCGGCTTTTGTT-----TG-----------------------------.......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-G..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCC----TAAACGCAAGGCCAT-...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................C--CTCCTC------------------CCATT------T---------------CTCTCCAG......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTC------------------CCATT------T---------------CTCTCCAG......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTGACGTAAC-GAAACGGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCC----TAAACGCAAGGCCAT-ACCCA-------G..............................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-G..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................G--------------TAA----TTGTT--GATT-CGTCTG----AT.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAAGGCCAT-ACCCA-------GT-------GTGACGT...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CCTC------------------CCATT------T---------------CTCTCCAG......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTCCC----TAAACGCAAGGCC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAACG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACG................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAAC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATTTTTGTCACAATTGTACG--------------T.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------GT-------GTGACGTAAC-GAAAC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GAA........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------GT-------GTGACGTAAC-GAAACGGA...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCA-------GT-------GTGACGTAAC-GAAACGGA...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A----------ACAAAAAC---------------------------AATCGG----------ACGAG---ATTAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAT-ACCCA-------GT-------GTGACGTA..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-GAAAC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAAGGCCAT-ACCCA-------G..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCC----TAAACGCAAGGCCA.............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAT-ACCCA-------GT-------GTGACGTAAC-GA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-GAAACG.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA-------GT-------GTGACGTAAC-GAAACGGAGAG2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTGACGTAAC-GAAACGG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAAC-GAAACGGAGAG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAT-ACCCA-------GT-------GTGAC.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-GAAACGGAA..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------GTGACGTAAC-GAAACGGA...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAAC......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAT-ACCCA-------GT-------GTGACGT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A----------ACAAAAAC---------------------------AATCGG----------ACGAG---AT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAAGGCCAT-ACCCA-------GT-------GTGACGT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------GT-------GTGACGTAAC-GAAACGGAGAG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TAAACGCAAGGCCAT-ACCCA-------GT-------GT....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTTGCAAGTAACGTC---CATTA-AAATAA-C----------C-CC-----AC------A-------------------CT----CACACCACCAG---AATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA--AATAGTT--AATT-CGTCTG----ATCGTACATTCAT-TTTCGTGTACCC--TATATA--TTTTAGTCTT-TCCTATCACT----------------------------T-TTTTTTTATTAACTTGCCACGGTT---TCGGCTTTTC-C-----TG-----------------------------TTTC--CCCATC------------------CGGTT------T---------------CTCTCCAGGATTCCC----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-...........1912.0020000110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-G..........2011.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGCCAT-ACCCA-------GT-------GTGACGT...............2411.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGCCAT-ACCCA-------GT-------GT....................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GA.........2111.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-ACCCA-------GT-------GTGACGTAAC-...........2011.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAAGGCCAT-ACCCA-------GT-------GT....................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-ACCCA-------GT-------GTGACGTAAC-G..........2111.0010000100
droYak3
AGTGTAA----------ACAAAAAC---------------------------AATCGT----------ACGAG---ATTTGCAAGTAACGTC---CATTT-AAATAA-T----------CCCC-----AC------A-------------------CG----CACACCACTGG---CATCAGTTTTCTTTTGTATTTTTGTCACAATTGTACG--------------TAA--TATAGTT--GATT-CGTCTG----ATCGTAGATTCATTTTTCGTGTACCC--TGTATA--TTTTAGCCTT-TCATATTCTTA-TC---A--------------------C--TTTTTTATTAACTTGCCACGGTT---CCGGCCTTTC-C-----TG-----------------------------TTTC--CCCATC------------------CGATT------T---------------CTCCACAGGATTCCC----TAAACGCAAGGCCAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTGACGTAAC-GAAACGGAGAG24112.0012000000000012
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GA.........2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GAAACG.....2511.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAAGGCCAT-ACCCA-------GT-------GT....................2211.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GAAA.......2311.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACCCA-------GT-------GTGACGTAAC-GAAAC......2411.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTCCC----TAAACGCAAGGC...............................................2011.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACCCA-------GT-------GTGACGTAAC-...........1811.00101000000000
............................................................................................................................................................................................................AATTGTACG--------------TAA--TATAGTT--GATT-...................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEug1
AGTGTAA----------ACAAAAAC---------------------------AATCGT----------TTGGG---ATTTGTAATTTACGACGATCATTTAAAATAA-T----------C-CC-----ACT-----T-------------------AG----CACATACATACATATATCAGTTTTCTTTTGTATTTTTGTCATACATGTACG--------------TAT--TATAGTT--GAAT-CGTCTA----GTCCTAGATTCATTTTTCGTGTACCC--TGTATAT-TTTTAGTCTT-TCCTATTCTTA-AC---T--------------------T-TTCTTTTATTAATT--CCACGGTT---TCGGCCTCTC-C-----TG-----------------------------TTTC--CCCCAC----------------A-CGATT------A---------------CTCCCCAGGATTCCC----TAAACGAAAAGCAAT-ACCCA-------GT-------GTGACGTAAC-GAAACGGAGAGSizeHit CountTotal NormTotal
No Reads
droBia1
AGTGTAA----------ACAAAAAC---------------------------AATCGT----------TCGAG---ATTTGCAATTTACGGT---CGTAT-AAATAA-T----------C-CC-----ACTCAC--T-------------------GG----CACGTCGTCGC---CATCAGTTTTCCTTTGTAGTTTTGTCACAATTGTACG--------------CAG--TATAGTT--GATT-CGTCTG----GTCCTAGATTTATTTTTCGTGTAACC--TGTATA--TTTTAGTCTT-TCCTATTATCT---------------------------CTTTTTTTTACTAACTTGCCACGGTT---GCGGCTTCTC-C-----TG-----------------------------TTTC--CACCTC------------------CGGTT------T---------------CTCTGCAGGATTCCC----TAAGCGCAAGGCGAT-AC-CA-------GT-------GTGACGTAAC-------GAGAGSizeHit CountTotal NormTotal
No Reads
droTak1
AGTGTAA----------ACAAAAAC---------------------------AATCGC----------TGGAG---ATTTGCAATTTA------------------A-A----------C-CC-----AC------T-------------------CG----CACATCATCAT---CATCAGTTTTCCTTTGTATTTTTGTCACAGTTGTACG--------------TAA--TATAGTT--GATT-CGTCTG----GTCGTAGATTTATTTTTCGTGTAACC--TGTATA--TTTTAGTCTT-TCCTATTATCT---------------------------C-CTTTTTTATTAACTTGCCACGGTTTC-CCGGCTTCTC-C-----TG-----------------------------TTTC--CCCCTC------------------CGATT------T---------------CTCCGCAGGATTCCC----CCAACGCAAGGCCAT-AACCA-------GT-------GTGACGTAAC-------GAGCGSizeHit CountTotal NormTotal
No Reads
droEle1
AGTGTAA----------ACAAAAAC---------------------------AATCAT----------TTGTG---ATTTGTTATTTAAAGC--TTAT-T-AA---A-T----------C-CC-----TC------T-------------------GG----CAC------------ATCACCTTTATTTTGTATTGTTGTCACAATTGTACG--------------TAA--TATAGTT--GATT-CGTCTG----GTCCTAGATTT--TTTTCGTGTACTC--TGTATA--T-TTAGTCTTTTTCTATTCTTT-TC---T--------------------C--TTCTTTATTAACTTGCAACGGTGGC-CTGGTCTATC-C-----CG-----------------------------TTTT--TA---C------------------CGATT------T---------------CTCTGCAGGATTTCCCGCGAAAACGTAAGGCAAT-ACCCA-------GT-------GTGACGTAACCGAAACGGAGAGSizeHit CountTotal NormTotal
No Reads
droRho1
AGTGTAA----------ACAAAAAC---------------------------AATCTT----------TCGGA---ATTTGTAATCTACTGC---CAATT-AA---A-T----------C-CC-----AC------T-------------------GGTAGGCA------------CATCAGTTTTCTTTTGTATTTTTGTCACAGTTGTACG--------------TAA--TATAGTT--AATT-CGTCTG----GTCCTAGATTT--TTTTCGTGTACCC--TGTATA--TTTTAGTCTT-TTCTATTCTTA-TC---T--------------------C--TTCTTTATTAACTGGTCACGGTTATACCGGCCTATC-C-----TG-----------------------------TTTC--TC---C------------------CGATT------T---------------CCCTTCAGGATTCCCCGCGAAAACGTAAGGCAAT-ACCCA-------GT-------GTGACGTAACCGAAACGGAGAGSizeHit CountTotal NormTotal
No Reads
droFic1
AGTGTAA----------ACAATAAC---------------------------AATCGC---------CTCGAG---AT-CGTAATTTACGGC---CGTTG-AAATAA-T----------CTCC-----GCC-----T-------------------TG----CCCA----------CATCAGTTTTCTTTTGTGTTTTTGTCACAATTGAACG--------------TAATATATAGTT--GACT-CGTCTG----GTCCAAGATTTTTTTTTCGTCTACTCCCTGTATA--TTTTAGTCTT-TTCTATTCTCA-TC---C--------------------T-TTTTTGTATTAACTTGTAACGGTTT--TCGGATTCT--C-----TG-----------------------------TTTTCCC---AC------------------CGATT------T---------------CTCTGCAGGATTCCC---CGAAACGCAAGGCAATTACCCA-------GT-------GTGACGTAAC-GTAACGGAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTGTAA----------ACAAAAGC--AGGCACTTACAAAACACACACATGT-AACAT------CCGATCGAG---AT-------------G--TT-TTT-AAA----TTGCGGTAGCTT-ACATGCAGTC-----AT---GC------TCAAACAAGGGGT---------CC---GATCAGTTTACGTGTATATTCTTGTCATTATTGTATG--------------TAA--TACAGTT--AGTTCCGTCTG----GTCCTATATTT-TCGCTCGTGTAATC--TGTATA--TTTTAGTCTTTTTCTATTTTCT-TG---A--------------------C--CGCTTTATTAATTCACCACTCTTC--CACGCCTCT--------TG-----------------------------TTTTCCCCCCTC------------------C----------G---------------CCATCCAGGATTCCC---ATATACGCAAGGCAAT-ACCGATACCCGAGTGTGTGAAGTGACGTAAC-TAAACGGAGAGSizeHit CountTotal NormTotal
No Reads
droAna3
TATTCAG----------AGACAAAC---------------------------AAACAT----------CCGAGAAGATCAGTCATTCT---------TTC-AGATA-----C---------AGATACAGAT-ACAAATACAGA------TCACACTTGG--------AATTGT---AATCAAATTTCTTTTGTATTGCTGTCACAATTGTACG--------------TAA--GATAGTT--AATT-CGTCTG----GTCCTAGATCT---TTTCGTGTACTC--TGTATATATTTTAGTCTT-TCCTACTCTTT-GC----CTACCGCACAGTTGCCTCTT-TTTTTTTTATTTATTA------------------------AATAC---TTGCCCCCCCCGACTCCGTCTCCCATTGTTTC--AACTCCCTTACTTATCTATATCACTTGTCTCTCTCCCACACACACACACACACATACAGGATTCCCC-CACATACGCAAGGCAGC-CCCAA-------GT-------GTAACGTATC-GTGACGGAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTAACGTATC-GTGACGGAGA.22113.0013121081
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTAACGTATC-GTGACGGAG..2119.009100071
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTAACGTATC-GTGACGGA...2013.003100020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-CACATACGCAAGGCAGC-CCCAA-------GT-------GT....................2712.002000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGTATC-GTGACGGAGA.2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATACGCAAGGCAGC-CCCAA-------GT-------......................2311.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTAACGTATC-GTGACGGA...2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------GT-------GTAACGTATC-GTGACGGAGA.2411.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTAACGTATC-GTGACGGAGA.2311.001000010
.....................................................................................................................................................................................AATTTCTTTTGTATTGCTGTC...............................................................................................................................................................................................................................................................................................................................................................2111.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCCC-CACATACGCAAG.................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTAACGTATC-GTGACGGAGAG2311.001000010
droBip1
--TGTAA----------ACAAAAACCCAGGCACTGCCAG-----AGACAAGCAAACAT------CCG-ACAAG---ATCAGTTATTCTCAGA---TATTC-AGATAC-T----------C-AGATTCAGAT-ACAGATACACAACACAATCAGACTGG-----------------------CATTTCTTTTATATTCCTGTCACAATTGAACG--------------TAAGATATAGTTATAACT-CGTGTGATCGGTCCTAGATTC---TTTCGTGTACTC--TGTATA--TTTTAGTCTT-TCCTACTCTTT-GC----CTACCG---------------------------------CACAGTT------GCCTCT--------TTTTTTCCCCCCCGGATTCCGTCTCTCA---TTTA--CTATAC----------------ACATCTCTCTCGTC---------------CTGTACAGGATTCCC---ACATACGCAAGGCAAC-CCCAA-------GT-------GTGACGTATC-GTGACGGAGAGSizeHit CountTotal NormTotal
No Reads
dp5
GGTGCAACAGTTATGTGGCGAAAAT---------------------------AACTGTAATTACTGTGTGGAG---AC-----------------TAT-----ATATCT----------C-CT-----AT------A-------------------AGTGAG---------GC---GATTAGTTTTCCTGTACATTTGTGTCACAAT---ACGAGCTAGTGCTAGCGTAA------------------------------------------------GCTC--TGAATA-----CAGTCTA-TTTGATCCCTTCTCCCAA--------------------G--TCGGTTATAAATTTGTTTTGATT---TTGGTTCCC--AAA-------------------TTC---------------T-------T------------------TCATT----GCT---------------TGACACAGGACTTCC---ATATACGCAAGGCAGC--CCAA-------GT-------GTAAC------GGAACTGAGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACTGAGA.2417.0070600001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACT.....2013.0030300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAA-------GT-------GTAAC------GGAACTGAGA.2113.0030300000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-------GT-------GTAAC------GGAACTGAGA.2012.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC--CCAA-------GT-------GTAAC------GGAACTGAGA.2512.0020200000000
.........................................................................................................................................................................................................................................................................................C--TGAATA-----CAGTCTA-TTTGATCCC.................................................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCAAGGCAGC--CCAA-------GT-------......................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGC--CCAA-------GT-------GTAAC------G..........1811.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAAC......1911.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGC--CCAA-------GT-------GTAAC------GGAACTGAGAG2811.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACTG....2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCC---ATATACGCAAGGCAGC--CCAA-------...............................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GT-------GTAAC------GGAACTGAGT.1811.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACTGAG..2311.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGC--CCAA-------GT-------GTAAC------GGAACTGAGA.2811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--CCAA-------GT-------GTAAC------GGAACTGAGA.2211.0010100000000
..................................................................................................................................................................................TTAGTTTTCCTGTACATT.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000100
droPer2
GGTGCAACAGTTATGTGGCGAAAAT---------------------------AACTGTAATTACTGTGTGGAG---AC-----------------TAT-----ATATCT----------C-CT-----AT------A-------------------AGTGAG---------GC---GATTAGTTTTCCTGTACATTTGTGTCACAAT---ACGAGCTAGTGCTAGCGTAA------------------------------------------------GCTC--TGAATA-----CAGTCTA-TTTGATCCCTTCTCCCAA--------------------G--TCGGTTATAAATTTGTTTTGATT---TTGGTTCCC--AAA-------------------TTC---------------T-------T------------------TCATT----GCT---------------TGACACAGGACTTCC---ATATACGCAAGGCAGC--CCAA-------GT-------GTAAC------GGAACTGAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACTGA...2212.002000002
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC--CCAA-------GT-------GTAAC------GGAACTG....2312.002000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACT.....2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACTGAG..2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGCAGC--CCAA-------GT-------GTAAC------GGAACT.....2611.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--CCAA-------GT-------GTAAC------GGAACTGAGA.2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-------GT-------GTAAC------GGAACTGAGA.2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--CCAA-------GT-------GTAAC------GGAACTGAGA.2311.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAAGGCAGC--CCAA-------GT-------......................1820.501010000

Generated: 05/18/2015 at 07:31 PM