ID:

dsi_26549

 Coordinate:

2l:23471832-23471981 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.6 -8.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTGCAAGTAAGTAACCATTTAATAATTATATTTATAATTTATATTAATTCTTCTTGTCCATTTATCCTTTTTCGGAGGTTTTCTTTTTAACAGCATTACTAAAATGAAAATAAACTTACATTTTTATGTGTGTTGATTTGAATTTAAAATGTTCTAGTGCTTGTTGTGTTTTAATAATATACTTTATCCGTATCTTGCAGAATTACAAGCGGAATTGGATATTTCATTTTGGATTACACCGAAGATGTCT
********************************************************************............(((...((((((.(((....((((((.((......)).))))))...)))))))))...)))......****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
...................................................................................................................................................................................................TGCAGAATTACAAGCGGAATTGGA............................... 24 0 1 2.00 2 1 0 1 0 0 0 0
..................................................................................................................................................................................................TTGCAGAATTACAAGCGGAATTGGA............................... 25 0 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................................................................................................................TTGCAGAATTACAAGCGGAATTGGATA............................. 27 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................TGTGTTGATTTGAATTTAAA...................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................TATGTGTGTTGATTTGAATTTAAAA..................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................ATCTTGCAGAATTACAAGCGGAATTGGA............................... 28 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................TACATTTTTATGTGTGTTGATTTGAATT.......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................AATTTAAAATGTTCTAGTGCTT........................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................TTTATCAGAATTACAAGCGGAATTGGA............................... 27 3 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................................TAAAATGTTCTAGTGCTTGTTGTG.................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................TCATTTTGGATTACACCGAAGATGTC. 26 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................TTATGTGTGTTGATTTGAATTTAAAA..................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................TTTTCGGAGGTTTTCTTTTTAACAGC............................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................................................TTTAAAATGTTCTAGTGCTTGTTGTGTT................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................TCTTGCAGAATTACAAGCGGAATTGGA............................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGGATATTTCATTTTGGATTACACCGAAGA..... 30 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTGTCCATTTATCCTTTTTCGGAGGTT.......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................AATTACAAGCGGAATT.................................. 16 0 4 0.25 1 0 1 0 0 0 0 0
.............................................................................................................................ATCTGTGTTGATTTGAAATT......................................................................................................... 20 2 5 0.20 1 0 0 0 0 1 0 0
.......................................................................................................................AGTTTTTTGTGTTTTGATTTGAA............................................................................................................ 23 3 8 0.13 1 0 0 0 0 0 1 0
.....................................................................................................................................................TGTTGTAGATCTTGTTGTGTTT............................................................................... 22 3 18 0.06 1 0 0 0 0 0 0 1

Anti-sense strand reads

AACGTTCATTCATTGGTAAATTATTAATATAAATATTAAATATAATTAAGAAGAACAGGTAAATAGGAAAAAGCCTCCAAAAGAAAAATTGTCGTAATGATTTTACTTTTATTTGAATGTAAAAATACACACAACTAAACTTAAATTTTACAAGATCACGAACAACACAAAATTATTATATGAAATAGGCATAGAACGTCTTAATGTTCGCCTTAACCTATAAAGTAAAACCTAATGTGGCTTCTACAGA
******************************************************************************************************............(((...((((((.(((....((((((.((......)).))))))...)))))))))...)))......******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
...................................................................AAAAAGCTTCCAAGAGA...................................................................................................................................................................... 17 2 20 1.30 26 26 0 0 0 0 0 0 0
................................................AGAAGAACAGGTAAATAG........................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................TAAGAAGGAGAGGTAATTAGGAA..................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0
.........................................ATAATTAAGAAGAACAGGTAAAT.......................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................................CAATTACGAAGAACAGGTA............................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0
................................................AGAAGATCAGGTAAATGG........................................................................................................................................................................................ 18 2 7 0.14 1 0 0 0 0 0 1 0 0
..........................................................................................GTCGTTATGATGTTACTAT............................................................................................................................................. 19 3 20 0.10 2 0 0 0 0 2 0 0 0
...............................................................TAGGAAAAAGGCTCC............................................................................................................................................................................ 15 1 16 0.06 1 0 0 0 0 0 0 0 1
................................................................................................................................ACCCAATTAACCTTAAATTTTA.................................................................................................... 22 3 18 0.06 1 0 0 0 0 0 0 1 0
..................................................................................GAAAAATTGTCGTGA......................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................................................ACCCAATTAACCTTAAATTTT..................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 1 0
................................................AGAAGATCAGGTAAATG......................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................ATGTTCGCCTTAAGGTA.............................. 17 2 20 0.05 1 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:23471782-23472031 + dsi_26549 TTGCAAGTAAGTA-------A-CCA-TTTAATAATTAT-----ATTT----ATAATTTATA-------TTAATTCTTCTTGTCCATTTAT---------------------------------------------------------------CCTTTTTCGGAG----------------------------GT--------------------------------------------T--------TT--C------------TTTTTAACAGCATTACTAAA-ATG------AAAATAAACT----TACATTTTTATGTGTGT--------------------------------TGATTTGAAT------------TT------------AAAATGTTCTAGTGCTTGTTGTGT---------------------------------------------------------------T---------------TTAATAATATACTTTATCCGTATCTTGCAGA---ATTACAAG-CG---------------------G-AATTGGATATTTCATTTTGGATTACACCGA-AG-----ATGTCT
droSec2 scaffold_131:17296-17545 - TTGCAAGTAAGTA-------A-CCA-TTTAATAATTAT-----ATTT----ATATTTTATT-------TTAATTCTTCTTGTCCATTTAT---------------------------------------------------------------CCTTTTTCGGAG----------------------------GT--------------------------------------------T--------TT--C------------TTTTTAACAGCATTACTAAA-ATG------AAAATATACT----TACATTTTTATGTGTGT--------------------------------TGATTTGAAT------------TT------------AAAATGTTCTAGTGCTTGTTGTGT---------------------------------------------------------------T---------------TTAATAATATACTTTATCCGTATCTTGCAGA---ATTACAAG-CG---------------------G-AATTGGATATTTCATTTTGGATTACACCGA-AG-----ATGTCT
dm3 chr2LHet:25094-25341 - TTGCAAGTAAGTA-------A-----TTTGTTAATTAT-----ATTT----ATATTTTTTA-------TTAATTCTTC-TGTCCATTTTT---------------------------------------------------------------CTTTTTTTAAA-------------------------------------------------------------------------------------------ATGTTTTTATTTTTTAACAGCATTAATAAA-ATG------AAAATATACA----CACATTTTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----CTAGTGCTGGTTATGT---------------------------------------------------------------T---------------TTAATAATATACTTTATCTGTATCTTGCAGA---ATTACAAG-TG---------------------G-AATTGGATATTTCATTTTGGATTACACCGA-ATATG-TTTGTCT
droEre2 scaffold_4845:529284-529581 + TTGCAAGTAAGTA-------C-CCA-TTTATTAATTAT-----ATTT----ACATTTTATG-------TTAATTTAGT-TATGCG-----------------------TTGTT----------CGTCTCGATTCCTTTCACTTAATTTTTGTTTTTCCTCATTT--------------------------------------TAT----------------------------------TTTCTTTTT--ACCCAATGTTTT---AATAAAACAGCATTAATGAA-ATG------AAAAGATACGTACATACATTAATATATATGT--------------------------------AAATTTGTAT------------TT------------TAAATT--TTAATGCTTGTTATAT---------------------------------------------------------------T---------------TGAATATTATATTTTATCTATATCTTGCAGA---ATTACAAA-CG---------------------ATGATTGGATATTTCATTTTTGATAACCCCGA-AC------ATGTT
droYak3 v2_chrUn_428:71445-71629 - AAATAAATAATCA---------CA-CTTATTTAAAAAT-----ATTA----ATAATTTTTT-------TAGGTTCTTT-TGTTTC-------------------------------------------------TATTTAT------------TTTTTTTTTGCT----------------------------TT--------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTTTTTTTTTTTAAATTAAATTAAATTATCCGACTTTTTTTAAAATATTAATTATTTTTGTAGAC---------------TTGTTTTTG---------------------------------------------------------G-T-TTTTAT-T------T-------TATTT-TTT--GCGTTTCTT
droEug1 scf7180000406353:153-319 - TTATATTTTATAT-------------TTTATATTTTAT-----ATTT----ATATTTTATA-------TTTATTTATTTTTTATATTTTA---------------------TA----------TTTT----------------------------------A-------------------------TATTTTATAT---TTTAT----------------------------------ATTTTAT----ATTTT----------------------------------------------------------------AT--------------------------------------ATTTTATAT------------TTTATATTTTATATTTTATATT-------------------------------------------------------------------------------------------------------------------------TTATA---TTTTATATTTT-A---------------------TATTTTACATT--------------------TT--ATATTTTAT
droBia1 scf7180000302508:1795-1902 + AAAACAAATTATA-------GCTTC-TGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT--------------------------------TGAC------------------AT------------ATTATGTTATACTATTTTATATAT---------------------------------------------------------------A---------------TTATTAATATAATTTTTTTGTATTTTTAAGA---ATTTTGAA-TG--------------------------------TT-----T---------------------TATATT
droTak1 scf7180000415160:8298-8476 - TTGTTTTTATTAT-------------TATAATAATTAT-----TATA----ACAATTATTA-------TTATTTTTATTATTATAA--------------------------CAATTATTATTA---------------------------------------------------------------------------------------------------------------------------------------------TTTTT---ATTATTATTAAATATA------AAAATATTT-----TA---------------TAATAATTA--------------------TTTGTATTTTTAT------------TT------------AAAATTTT-------TTATTTAAT---------------------------------------------------------------T---------------ATAGTTATAAATTTTATCTATATTT--------------------------------------------------------------------------AT--ACAACATTA
droEle1 scf7180000487618:28794-28974 - ATTATTATTATTA-------------TTATTTATTATT-----ATTA----TTATTATTAT-------TATGTTTTTT-CTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGTTAT---------ATAAAGACGA-----------CA---------------AAATGA--------------------------TGATTTGAAC------------TT------------TAAACTCTTTTTTGCTTTTCTCGT---------------------------------------------------------------T---------------TTAGTAATGTAATGTCTTAGTTTG----------------------GTTTAAAGAACTTGAAATTGG-AATTAAG--T-----TT---------------------TAGCTT
droRho1 scf7180000773653:909-1174 + TTTTAATACAATGAATAATATTTTC-TGGGGGTGTTCA-----ATAC----ATAATCTGTATTCTCTATTAATTTTT-----AAATTGTC-GTTGCAAGAGGC-----TA--------------------------T----------------TTTATTTT-----------------------------------------------------------------------------------------GGTCAGTTCT-----TTTGTAAA---------------AAAATG-ACAGTGACAA----AAAACTTAT-------------------------------------------TTTGAA-CACAC---------------------AATCTTTTCAACTATTTAAAACCT---------------------------------------------------------------ATTCTTGTTTGTTGGGCTAATAATAAAATGATTTATTACTTTAAAAAAACATTTTAAA-TGTG-----------------------TTTACCATTTCTTTT-------TAT-TG-A-----AATGTAA
droFic1 scf7180000453125:14851-14965 - TAGAAGCTATGTC---------------------------------------------------------AATTTTTCTATTGCGTTTCT---------------------------------------------------------------ATATTTTCGAAG----------------------------AT--------------------------------------------T--------AT--T------------AATATAACAGCTATG-------TG------ATATAGTCGT----CCGATTTTAATGAATGT--------------------------------TAATTCAAAA------------TT------------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGTT
droKik1 scf7180000302610:739075-739257 + ATTTAATTATTAT------------------------------TTTT----TTTATTTATT-------TTATTTTATTTCGTTTTATT--------------------TTATTTTTTATTATTT----------TTTTTT---------------------A--TGTTATTTATTTTTATTATATTTTATTTTATTT--------TGTTTTATTGTATTTATTTATTTTATTTTTTTTA-----------------------------------ATTTTAATATA-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------A-ATTTGAATTTCGTTTTTTGGTTT--------TT-----ATATTT
droAna3 scaffold_13082:2975136-2975247 - TTTTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTAGTTATTAAA-ATA------AAAATAAATA----AAAATTTGTATT-A---TAATAATCT------------------------GTTATATAT------------AT------------ATTAAGTTCTTATATTTATT---------------------------------------------------------------------------------------TTATAATCATTATCCG---------------------------------------------------------------------------------------TTTTT
droBip1 scf7180000396338:13164-13350 - TTGTAAGTACTTA-------T---------TCAAAACATTTACCAAA----A---TTATT----------------------------TT---------------------------------------------------------------CTTTTTTTAAG--ATATATAAATCTTATCTTTTAACTTATATGT--------AGTCTAAATGTACCATTTTTATGAA--------------------------------------------GCATTACCAAA-AGA------AAAATAAGCT----TCCAAATTTATAA-------------------------------CATTTTAATTTTAAT------------TT------------AAAATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTA------------------ATTCTGT-T------TACGTT
dp5 2:22633518-22633586 - TAGTTATGTTCTA---------------------------------------------ATG-------TCGATTCTTGCACTCCGTTTAT---------------------------------------------------------------CCTCTTTCGCTG----------------------------GT--------------------------------------------T--------GA--C------------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--AAAATGCGT
droPer2 scaffold_6:4132219-4132435 - TTTGTGTATATGT--T----A-TT-CTTATTTGTAAATTTTTTTAAA----A---GTATTT-------TAA---------GTGTTTTTT---------------------------------------------------------------TTCAATACAAAGT----------------------------GT--------------------------------------------T--------TT--C------------TTTTTACCGGCTTTTTTAAA-ATG------AAAATTTTTT----CATCTTAAAAAT-T-----------AATTTTTTTTTGTCTAAAATGCTTTTATTTCAAT------------AC------------AAAGTATTTTATTGCTAAATTTAT---------------------------------------------------------------T---------------T----CTTA------------------------------------------------------------ATTTTTGTT------------TATATGT-TAT--TCTTGTTTT
droWil2 scf2_1100000004585:294949-295090 + ACCATTTTG------------------------ATTAA-----ATTTATACATGTTTTACA------------TTTTCTTTTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGTGTT
droVir3 scaffold_12963:18593504-18593625 - ATATTTTTTCCTG----------------------------------------------------------ATTTTTT-CCTCA------------------------------------------------------------ATCTTTTCTTCGCTTTTAATT----------------------------AG--------------------------------------------T--------TT--C------------TTTTGATCATGTTTAATAGA-ATG------AGTATTAATT----TACATTTTAAGT-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------ATTAAAAAGATTTAAA-------------------------------------------ATTATAA
droMoj3 scaffold_6500:7853264-7853469 + TTATTTAAATGTA-------T-TTT-TGTAATAGATAT-----ATAC----ATATTTTATA-------TTATTTTTTT-TTTATATATATATTTATCTAACGTAATATTATTT----------ATTTTTAATTTTTTTAA---------------------A--C------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGT--------------------------------TATTTTAAAT------------TT------------TATTTCAACAAGCTCATATTATAT---------------------------------------------------------------A---------------TTT----------------------ATTATT---ATTTCAAT-CG---------------------T-AATTTTTGTTTATATATTTCATTAATATAT-AT-----ACATAT
droGri2 scaffold_15245:13074397-13074609 - TTATAAATATATT-------TATTA-TGTGCTGTTTTT-----ATTT----ATAATTTATA-------TTTATTTTATTTATACT-----------------------TTTTT----------TTTTATATTTCCATCCA---------------------A--CTTTGTCAATCTCCATATAATCTCAAATAATTTAATTTTAT----------------------------------TTTCTATTT--ATC------------TAG-------------------------------------------------------------------------------------------------CA-CAATCCATATTT--TAAATTCTATATAATTTAAT-------------------------------------------------------------------------------------------------------------------------CTAAA---ACTAAAAA-TA---------------------A-ATCTCTAAATTTTAATT---------------------TGAATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGCAAGTAAGTA-------A-CCA-TTTAATAATTAT-----ATTT----ATAATTTATA-------TTAATTCTTCTTGTCCATTTAT---------------------------------------------------------------CCTTTTTCGGAG----------------------------GT--------------------------------------------T--------TT--C------------TTTTTAACAGCATTACTAAA-ATG------AAAATAAACT----TACATTTTTATGTGTGT--------------------------------TGATTTGAAT------------TT------------AAAATGTTCTAGTGCTTGTTGTGT---------------------------------------------------------------T---------------TTAATAATATACTTTATCCGTATCTTGCAGA---ATTACAAG-CG---------------------G-AATTGGATATTTCATTTTGGATTACACCGA-AG-----ATGTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGA---ATTACAAG-CG---------------------G-AATTGGA.....................................2412.00200000011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGA---ATTACAAG-CG---------------------G-AATTGGA.....................................2512.00200000020000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGA---ATTACAAG-CG---------------------G-AATTGGATA...................................2711.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................TGTGT--------------------------------TGATTTGAAT------------TT------------AAA....................................................................................................................................................................................................................2011.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................TATGTGTGT--------------------------------TGATTTGAAT------------TT------------AAAA...................................................................................................................................................................................................................2511.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTGCAGA---ATTACAAG-CG---------------------G-AATTGGA.....................................2811.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................TACATTTTTATGTGTGT--------------------------------TGATTTGAAT------------T....................................................................................................................................................................................................................................2811.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAT------------TT------------AAAATGTTCTAGTGCTT......................................................................................................................................................................................................2211.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................T------------AAAATGTTCTAGTGCTTGTTGTG................................................................................................................................................................................................2411.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTTGGATTACACCGA-AG-----ATGTC.2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................TTATGTGTGT--------------------------------TGATTTGAAT------------TT------------AAAA...................................................................................................................................................................................................................2611.00100000010000000000
............................................................................................................................................................TTTTCGGAG----------------------------GT--------------------------------------------T--------TT--C------------TTTTTAACAGC.............................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T------------TT------------AAAATGTTCTAGTGCTTGTTGTGT---------------------------------------------------------------T---------------................................................................................................................2811.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGCAGA---ATTACAAG-CG---------------------G-AATTGGA.....................................2711.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATATTTCATTTTGGATTACACCGA-AG-----A.....3011.00100000010000000000
..............................................................................TTGTCCATTTAT---------------------------------------------------------------CCTTTTTCGGAG----------------------------GT--------------------------------------------T--------.........................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTACAAG-CG---------------------G-AATT........................................1640.25100000000001000000
droSec2
TTGCAAGTAAGTA-------A-CCA-TTTAATAATTAT-----ATTT----ATATTTTATT-------TTAATTCTTCTTGTCCATTTAT---------------------------------------------------------------CCTTTTTCGGAG----------------------------GT--------------------------------------------T--------TT--C------------TTTTTAACAGCATTACTAAA-ATG------AAAATATACT----TACATTTTTATGTGTGT--------------------------------TGATTTGAAT------------TT------------AAAATGTTCTAGTGCTTGTTGTGT---------------------------------------------------------------T---------------TTAATAATATACTTTATCCGTATCTTGCAGA---ATTACAAG-CG---------------------G-AATTGGATATTTCATTTTGGATTACACCGA-AG-----ATGTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTTTGGATTACACCGA-AG-----A.....2511.0011000
dm3
TTGCAAGTAAGTA-------A-----TTTGTTAATTAT-----ATTT----ATATTTTTTA-------TTAATTCTTC-TGTCCATTTTT---------------------------------------------------------------CTTTTTTTAAA-------------------------------------------------------------------------------------------ATGTTTTTATTTTTTAACAGCATTAATAAA-ATG------AAAATATACA----CACATTTTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----CTAGTGCTGGTTATGT---------------------------------------------------------------T---------------TTAATAATATACTTTATCTGTATCTTGCAGA---ATTACAAG-TG---------------------G-AATTGGATATTTCATTTTGGATTACACCGA-ATATG-TTTGTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................TATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----C..............................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGCAGA---ATTACAAG-TG---------------------G-AATTGGA.....................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010201010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----C..............................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000020101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................TTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----C..............................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................TTAAA-------------------------------------------------------------------------------------------ATGTTTTTATTTTTTAACAGC.............................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGA---ATTACAAG-TG---------------------G-AATTGGATA...................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAG-TG---------------------G-AATTGGATATTT................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCTGGTTATGT---------------------------------------------------------------T---------------TTAATAATA.......................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CATTTTTATGGGTGT--------------------------------TGGTTTGAAT------------.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................A-----CTAGTGCTGGTTATGT---------------------------------------------------------------T---------------TTAATAATA.......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------G-AATTGGATATTTCATTTTGGAT......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAACAGCATTAATAAA-ATG------AAAATATA..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTATCTTGCAGA---ATTACAAG-TG---------------------G-AA..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................G------AAAATATACA----CACATTTTTATGGG..............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAACAGCATTAATAAA-ATG------AAAATA....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................T--------------------------------TGGTTTGAAT------------TC------------AAA-----CTAGTGCTGG.....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACAAG-TG---------------------G-AATTGGATATTTCA..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTTTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AA.....................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................................................................................................................................................................................................................................................................TACA----CACATTTTTATGGGTGT--------------------------------TGGT.......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-TG---------------------G-AATTGGATATTTCATTTTGGAT......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATAATATACTTTATCTG............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TTTTATTTTTTAACAGCATTAATAAA-A..................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTTATGGGTGT--------------------------------TGGTTTGAAT------------T....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................T---------------------------------------------------------------CTTTTTTTAAA-------------------------------------------------------------------------------------------ATGTTTTTATTTT.....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTTTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----C..............................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TTAATAAA-ATG------AAAATATACA----CACA........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTGAAT------------TC------------AAA-----CTAGTGCTGGTTATG................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AA.....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................TTTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----CT.............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGA---ATTACAAG-TG---------------------G-AATTGGA.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATTACACCGA-ATATG-TTTGTC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA---ATTACAAG-TG---------------------G-AATTGGATATT.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGATATTTCATTTTGGAT......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TCTTC-TGTCCATTTTT---------------------------------------------------------------CTTTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TATTTTTTA-------TTAATTCTTC-TGTCCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCATTTTGGATTACACCGA-A............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAG-TG---------------------G-AATTGGATATTTCATT............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTATGGGTGT--------------------------------TGGTTTGAC..................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................TTAATTCTTC-TGTCCATTTTT---------------------------------------------------------------CTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TTAACAGCATTAATAAA-ATG------AAAATA....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TATGGGTGT--------------------------------TGGTTTGAAT------------TC------------AAA-----CT.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAG-TG---------------------G-AATTGGATA...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTGAAT------------TC------------AAA-----CTAGTGCTGGTTA..................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ACATTTTTATGGGTGT--------------------------------TGGT.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTATCTTGCAGA---ATTACAAG-TG---------------------G-A...........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TATGGGTGT--------------------------------TGGTTTGTC..................................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTGCAAGTAAGTA-------C-CCA-TTTATTAATTAT-----ATTT----ACATTTTATG-------TTAATTTAGT-TATGCG-----------------------TTGTT----------CGTCTCGATTCCTTTCACTTAATTTTTGTTTTTCCTCATTT--------------------------------------TAT----------------------------------TTTCTTTTT--ACCCAATGTTTT---AATAAAACAGCATTAATGAA-ATG------AAAAGATACGTACATACATTAATATATATGT--------------------------------AAATTTGTAT------------TT------------TAAATT--TTAATGCTTGTTATAT---------------------------------------------------------------T---------------TGAATATTATATTTTATCTATATCTTGCAGA---ATTACAAA-CG---------------------ATGATTGGATATTTCATTTTTGATAACCCCGA-AC------ATGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTGATAACCCCGA-AC------.....1911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................AT------------TT------------TAAATT--TTAATGCTTGTT...................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---ATTACAAA-CG---------------------ATGATTGGATATTT................................2611.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACAAA-CG---------------------ATGATTGGAT....................................2011.0010000010
........................................................................................................................................................................................................................................................................................ATGAA-ATG------AAAAGATACGTAC.............................................................................................................................................................................................................................................................................................................2111.0010000100
droYak3
AAATAAATAATCA---------CA-CTTATTTAAAAAT-----ATTA----ATAATTTTTT-------TAGGTTCTTT-TGTTTC-------------------------------------------------TATTTAT------------TTTTTTTTTGCT----------------------------TT--------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTTTTTTTTTTTAAATTAAATTAAATTATCCGACTTTTTTTAAAATATTAATTATTTTTGTAGAC---------------TTGTTTTTG---------------------------------------------------------G-T-TTTTAT-T------T-------TATTT-TTT--GCGTTTCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TTATATTTTATAT-------------TTTATATTTTAT-----ATTT----ATATTTTATA-------TTTATTTATTTTTTATATTTTA---------------------TA----------TTTT----------------------------------A-------------------------TATTTTATAT---TTTAT----------------------------------ATTTTAT----ATTTT----------------------------------------------------------------AT--------------------------------------ATTTTATAT------------TTTATATTTTATATTTTATATT-------------------------------------------------------------------------------------------------------------------------TTATA---TTTTATATTTT-A---------------------TATTTTACATT--------------------TT--ATATTTTATSizeHit CountTotal NormTotal
No Reads
droBia1
AAAACAAATTATA-------GCTTC-TGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT--------------------------------TGAC------------------AT------------ATTATGTTATACTATTTTATATAT---------------------------------------------------------------A---------------TTATTAATATAATTTTTTTGTATTTTTAAGA---ATTTTGAA-TG--------------------------------TT-----T---------------------TATATTSizeHit CountTotal NormTotal
No Reads
droTak1
TTGTTTTTATTAT-------------TATAATAATTAT-----TATA----ACAATTATTA-------TTATTTTTATTATTATAA--------------------------CAATTATTATTA---------------------------------------------------------------------------------------------------------------------------------------------TTTTT---ATTATTATTAAATATA------AAAATATTT-----TA---------------TAATAATTA--------------------TTTGTATTTTTAT------------TT------------AAAATTTT-------TTATTTAAT---------------------------------------------------------------T---------------ATAGTTATAAATTTTATCTATATTT--------------------------------------------------------------------------AT--ACAACATTASizeHit CountTotal NormTotal
No Reads
droEle1
ATTATTATTATTA-------------TTATTTATTATT-----ATTA----TTATTATTAT-------TATGTTTTTT-CTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGTTAT---------ATAAAGACGA-----------CA---------------AAATGA--------------------------TGATTTGAAC------------TT------------TAAACTCTTTTTTGCTTTTCTCGT---------------------------------------------------------------T---------------TTAGTAATGTAATGTCTTAGTTTG----------------------GTTTAAAGAACTTGAAATTGG-AATTAAG--T-----TT---------------------TAGCTTSizeHit CountTotal NormTotal
No Reads
droRho1
TTTTAATACAATGAATAATATTTTC-TGGGGGTGTTCA-----ATAC----ATAATCTGTATTCTCTATTAATTTTT-----AAATTGTC-GTTGCAAGAGGC-----TA--------------------------T----------------TTTATTTT-----------------------------------------------------------------------------------------GGTCAGTTCT-----TTTGTAAA---------------AAAATG-ACAGTGACAA----AAAACTTAT-------------------------------------------TTTGAA-CACAC---------------------AATCTTTTCAACTATTTAAAACCT---------------------------------------------------------------ATTCTTGTTTGTTGGGCTAATAATAAAATGATTTATTACTTTAAAAAAACATTTTAAA-TGTG-----------------------TTTACCATTTCTTTT-------TAT-TG-A-----AATGTAASizeHit CountTotal NormTotal
No Reads
droFic1
TAGAAGCTATGTC---------------------------------------------------------AATTTTTCTATTGCGTTTCT---------------------------------------------------------------ATATTTTCGAAG----------------------------AT--------------------------------------------T--------AT--T------------AATATAACAGCTATG-------TG------ATATAGTCGT----CCGATTTTAATGAATGT--------------------------------TAATTCAAAA------------TT------------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGTTSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTAATTATTAT------------------------------TTTT----TTTATTTATT-------TTATTTTATTTCGTTTTATT--------------------TTATTTTTTATTATTT----------TTTTTT---------------------A--TGTTATTTATTTTTATTATATTTTATTTTATTT--------TGTTTTATTGTATTTATTTATTTTATTTTTTTTA-----------------------------------ATTTTAATATA-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------A-ATTTGAATTTCGTTTTTTGGTTT--------TT-----ATATTTSizeHit CountTotal NormTotal
No Reads
droAna3
TTTTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTAGTTATTAAA-ATA------AAAATAAATA----AAAATTTGTATT-A---TAATAATCT------------------------GTTATATAT------------AT------------ATTAAGTTCTTATATTTATT---------------------------------------------------------------------------------------TTATAATCATTATCCG---------------------------------------------------------------------------------------TTTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTGTAAGTACTTA-------T---------TCAAAACATTTACCAAA----A---TTATT----------------------------TT---------------------------------------------------------------CTTTTTTTAAG--ATATATAAATCTTATCTTTTAACTTATATGT--------AGTCTAAATGTACCATTTTTATGAA--------------------------------------------GCATTACCAAA-AGA------AAAATAAGCT----TCCAAATTTATAA-------------------------------CATTTTAATTTTAAT------------TT------------AAAATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTA------------------ATTCTGT-T------TACGTTSizeHit CountTotal NormTotal
No Reads
dp5
TAGTTATGTTCTA---------------------------------------------ATG-------TCGATTCTTGCACTCCGTTTAT---------------------------------------------------------------CCTCTTTCGCTG----------------------------GT--------------------------------------------T--------GA--C------------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--AAAATGCGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTTGTGTATATGT--T----A-TT-CTTATTTGTAAATTTTTTTAAA----A---GTATTT-------TAA---------GTGTTTTTT---------------------------------------------------------------TTCAATACAAAGT----------------------------GT--------------------------------------------T--------TT--C------------TTTTTACCGGCTTTTTTAAA-ATG------AAAATTTTTT----CATCTTAAAAAT-T-----------AATTTTTTTTTGTCTAAAATGCTTTTATTTCAAT------------AC------------AAAGTATTTTATTGCTAAATTTAT---------------------------------------------------------------T---------------T----CTTA------------------------------------------------------------ATTTTTGTT------------TATATGT-TAT--TCTTGTTTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACCATTTTG------------------------ATTAA-----ATTTATACATGTTTTACA------------TTTTCTTTTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGTGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................TGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------....................................................................27169.00690430260
.................................................................................................................................................................................................................................................................................................................................TATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GG..........................................27127.0027030240
..............................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGTG..25116.0016000160
.............................................................................................................................................................................................................................................................................................................................TGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAA...................................................................................................................................................................................................................25114.001406080
.....................................................................................................................................................................................................................................................................................................................TATATTTTTGTTTATGC--------------------------------GGATTTACAT------------T....................................................................................................................................................................................................................................28113.0013010120
......................................................................................TATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CT.......................................................................................................................................................................................................................................................................................................................................................26112.0012011010
.................................................................................TACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AG.....................................................................................................................................................................................................................................................................................................................................................................26110.001004060
..........................................................................................................................................................................................................................................................................................................................................................................TTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCA...................................25110.001005050
.......................................................................................................................................................................................................................................................................................................................TATTTTTGTTTATGC--------------------------------GGATTTACAT------------T....................................................................................................................................................................................................................................2619.00904050
.................................................................................................................................................................................................................................................................................................................................TATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------G...........................................2619.00902070
................................................................................................TACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----............................................................................................................................................................................................................................................................................................................2819.00906030
...........................................................................................................................................................................................................................................................................................................................................................................TACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGC....................................2317.00704030
.....................................................................................................................................................................................................................................................................................................................TATATTTTTGTTTATGC--------------------------------GGATTTACAT------------.....................................................................................................................................................................................................................................2717.00701060
...........................................................................................................................................................................................................................................................................................................................................................................TACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCA...................................2417.00706010
...................................................................................................................................................................................................................................................................................................................................TGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GG..........................................2516.00600060
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-G---------------------GGTGTAGCATTTTATTG---------------------TGTGTT2516.00603030
...................................................................................................................................................................................................................................................................................................................................TGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTG........................................2716.00604020
...................................................................................................................................................................................................................................................................................................................................TGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGT.........................................2616.00600060
..........................................................................................................................................................................................................................................................................................................................................................................TTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGC....................................2416.00602040
................................................................................................................................................................................................................................................................................................................................TTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GG..........................................2815.00505000
.......TG------------------------ATTAA-----ATTTATACATGTTTTACA------------TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.00504010
..............................................TATACATGTTTTACA------------TTTTCTTTTACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.00505000
..............................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGTGT.2614.00401030
.......TG------------------------ATTAA-----ATTTATACATGTTTTACA------------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00404000
...............................................................................TTTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AG.....................................................................................................................................................................................................................................................................................................................................................................2814.00404000
................................................................................TTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AG.....................................................................................................................................................................................................................................................................................................................................................................2714.00402020
...................................TAA-----ATTTATACATGTTTTACA------------TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00303000
......................................................................................TATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTT......................................................................................................................................................................................................................................................................................................................................................2713.00303000
.............................................................................................................................................................................................................................................................................TTCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGAT.......................................................................................................................................................................................................................................................2913.00303000
.......TG------------------------ATTAA-----ATTTATACATGTTTTACA------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00303000
.........................................................................................................................................................................................................................................................................................................................................................................TTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGC....................................2513.00303000
...........................................................................................................................................................................................................................................................................................................................................................................TACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTT................................2713.00302010
...........................................................................................................................................................................................................................................................................................................................................................................TACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCAT..................................2513.00302010
..............................................................................................................................................................................................................................................................................TCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGATT......................................................................................................................................................................................................................................................2913.00303000
.............................................TTATACATGTTTTACA------------TTTTCTTTTACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00303000
............................................................................................................................................................................................................................................................................................................................TTGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAAT..................................................................................................................................................................................................................2712.00200020
.............................................................................................................................................................................................................................................................................TTCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GG.........................................................................................................................................................................................................................................................2712.00201010
..............................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TG....2312.00201010
.................................................................................................................................................................................................................................................................................................................................TATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGT.........................................2812.00202000
................................................................................................................................................................................................................................................................................................................................TTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------G...........................................2712.00201010
..............................................................................................................................................................................................................................................................................TCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGAT.......................................................................................................................................................................................................................................................2812.00202000
.............................................................................................................................................................................................................................................................................TTCAAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGA........................................................................................................................................................................................................................................................2812.00201010
............................................................................................................................................................................................................................................................................................................................................................................ACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCA...................................2312.00202000
...........................................................................................................................................................................................................................................................................................................................................................................TACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATT.................................2612.00202000
............................................................................TCTTTTACATTATT-ATTCTTACAAGC-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201010
...............................................................................................................................................................................................................................................................................................................................TTTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------G...........................................2812.00201010
............................................................................TCTTTTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000
............................................................................................................................................................................................................................................................................................................................TTGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAA...................................................................................................................................................................................................................2612.00201010
...................................................................................................................................................................................................................................................................................................................................TGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------G...........................................2411.00101000
..........................................................................................................................................................................................................................................................................................................................TTTTGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAA...................................................................................................................................................................................................................2811.00100010
.........................................................................................T-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTT....................................................................................................................................................................................................................................................................................................................................................2611.00101000
......TTG------------------------ATTAA-----ATTTATACATGTTTTACA------------TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
...........................................................................................................................................................................................................................................................................................................................................................................TACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTC................................2711.00101000
.......................................................TTTACA------------TTTTCTTTTACATTATT-AT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................ATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGTG..2611.00100010
................................................................................................................................................................................................................................................................................AAG----------------------------AA----TATATTTTTGTTTATGC--------------------------------GGATT......................................................................................................................................................................................................................................................2711.00101000
.......TG------------------------ATTAA-----ATTTATACATGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................................................................................................................................................................................................TAA---------CTTTTTTCAAG----------------------------AA----TATATTTTTGTT................................................................................................................................................................................................................................................................................................2811.00101000
..........................................................................................................................................................................................................................................................................TTTTTCAAG----------------------------AA----TATATTTTTGTTTA..............................................................................................................................................................................................................................................................................................2511.00101000
.....................................................................................................................................................................................................................................................................................................................TATATTTTTGTTTATGC--------------------------------GGATT......................................................................................................................................................................................................................................................2211.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................AAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TG....2611.00100010
....................................................................................................................................................................................................................................................................................................................................GC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTG........................................2611.00101000
...................................TAA-----ATTTATACATGTTTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...................................TAA-----ATTTATACATGTTTTACA------------TTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
............................................................................................................TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----TA..........................................................................................................................................................................................................................................................................................................2311.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TG....2411.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................AATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------T.....2411.00100010
.....................................................................................................................................................................................................................................................................................................................TATATTTTTGTTTATGC--------------------------------GGATTT.....................................................................................................................................................................................................................................................2311.00100010
............................................................................................................................................................................................................................................................TAA---------CTTTTTTCAAG----------------------------AA----TATA........................................................................................................................................................................................................................................................................................................2011.00100010
ACCATTTTG------------------------ATTAA-----ATTTATACATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
................................................................................TTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..................................................................................................................................................................................................................................................................................................................................ATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GG..........................................2611.00100010
.................................................................................TACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
................................................TACATGTTTTACA------------TTTTCTTTTACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
................................................................................TTACATTATT-ATTCTTACAAGC-----T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................................................................................................................................................................TGTTTATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-..................................................................2811.00101000
..............................................................................TTTTACATTATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
............................................................................................TTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTT......................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........................................................TACA------------TTTTCTTTTACATTATT-ATTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
....................................AA-----ATTTATACATGTTTTACA------------TTTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................AATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TG....2511.00100010
......TTG------------------------ATTAA-----ATTTATACATGTTTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............................................................................................................................................................................................................................................................................................................................GTTTATGC--------------------------------GGATTTACAT------------TT------------AAAA...................................................................................................................................................................................................................2411.00100010
...................................TAA-----ATTTATACATGTTTTACA------------TTTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.............................................................................................................................................................................................................................................................................................................................................................................CAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGC....................................2111.00100010
........................................................................................TT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTA...................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................T------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATT............................2511.00101000
.............................................TTATACATGTTTTACA------------TTTTCTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
............................................................................................................TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----TATAT.......................................................................................................................................................................................................................................................................................................2611.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGT...2411.00100010
.................................................................................................ACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----TA..........................................................................................................................................................................................................................................................................................................2911.00101000
..................................TTAA-----ATTTATACATGTTTTACA------------TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
........................................................................................................................................................................................................................................................................................................................ATTTTTGTTTATGC--------------------------------GGATTTACAT------------T....................................................................................................................................................................................................................................2511.00100010
.....................................................................................................................................................................................................................................................................................................................TATATTTTTGTTTATGC--------------------------------GGATTTACA..................................................................................................................................................................................................................................................2611.00101000
............................................................................................TTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CTTTTTTCA................................................................................................................................................................................................................................................................................................................................................2811.00101000
...............................................................................................................................................................................................................................................................................................................................TTTATGC--------------------------------GGATTTACAT------------TT------------AAAAT..................................................................................................................................................................................................................2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................T------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTA..............................2511.00101000
.................................................................................................................................................................................................................................................................................................................................TATGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------....................................................................2311.00101000
..........................................................................TTTCTTTTACATTATT-ATTCTTACAAGC-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------GGTGTAGCATTTTATTG---------------------TGT...2111.00101000
..........................................................................................................................................................................................................................................................................................................................................................................TTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTT................................2811.00101000
.............................................TTATACATGTTTTACA------------TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.......................................................................................................................................................................................................................................................................................................................TATTTTTGTTTATGC--------------------------------GGATTTACAT------------.....................................................................................................................................................................................................................................2511.00100010
...................................................................................................................................................................................................................................................................................................................................TGC--------------------------------GGATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GTG.........................................2611.00100010
........G------------------------ATTAA-----ATTTATACATGTTTTACA------------TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....................................AA-----ATTTATACATGTTTTACA------------TTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................................................................................................................................................................................................TGTTTATGC--------------------------------GGATTTACAT------------TT------------AAA....................................................................................................................................................................................................................2411.00101000
..........................................................................................................................................................................................................T-----------------------------------------------AGTAA---------CTTTTTTCAAG----------------------------AA----TATATTTT....................................................................................................................................................................................................................................................................................................2711.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAGCATTTTATTG---------------------TGTGTT2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................GATTTACAT------------TT------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------T-G---------------------GGTGTAG.....................................2611.00101000
...........................................................................TTCTTTTACATTATT-ATTCTTACAAGC-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.......................................................................................ATT-ATTCTTACAAGC-----TA--------------------------------------------------------------------------------------------T-----------------------------------------------AGTAA---------CT.......................................................................................................................................................................................................................................................................................................................................................2511.00101000
droVir3
ATATTTTTTCCTG----------------------------------------------------------ATTTTTT-CCTCA------------------------------------------------------------ATCTTTTCTTCGCTTTTAATT----------------------------AG--------------------------------------------T--------TT--C------------TTTTGATCATGTTTAATAGA-ATG------AGTATTAATT----TACATTTTAAGT-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------ATTAAAAAGATTTAAA-------------------------------------------ATTATAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TTATTTAAATGTA-------T-TTT-TGTAATAGATAT-----ATAC----ATATTTTATA-------TTATTTTTTT-TTTATATATATATTTATCTAACGTAATATTATTT----------ATTTTTAATTTTTTTAA---------------------A--C------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGT--------------------------------TATTTTAAAT------------TT------------TATTTCAACAAGCTCATATTATAT---------------------------------------------------------------A---------------TTT----------------------ATTATT---ATTTCAAT-CG---------------------T-AATTTTTGTTTATATATTTCATTAATATAT-AT-----ACATATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTATAAATATATT-------TATTA-TGTGCTGTTTTT-----ATTT----ATAATTTATA-------TTTATTTTATTTATACT-----------------------TTTTT----------TTTTATATTTCCATCCA---------------------A--CTTTGTCAATCTCCATATAATCTCAAATAATTTAATTTTAT----------------------------------TTTCTATTT--ATC------------TAG-------------------------------------------------------------------------------------------------CA-CAATCCATATTT--TAAATTCTATATAATTTAAT-------------------------------------------------------------------------------------------------------------------------CTAAA---ACTAAAAA-TA---------------------A-ATCTCTAAATTTTAATT---------------------TGAATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:38 AM