ID:

dsi_26259

 Coordinate:

x:19698928-19699077 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.6 -10.5 -10.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+

Sense Strand Reads

AGAAGTGTGGGCGTGGCAGTTTTGGCCGGTTTGTGGGCGTGGCAACATTTGGAAACAAATTTGCGCCTAATCTTAACATTCTAGCCTTTATAGTTTCTGAGATCGAGACCTTCATACGGACGGTCTGACAGACGGATGGACAGTATATTTGGCTTCCAGAATACGTTTTATTAATATCGCTTAATCTTCTATCTTTTTAGTCGGGCCATGTACAAGCACCAACGCGAGACTGGTCACCACAATTGGCCAT
**********************************************************************************************.((((...((.((((((((....))).)))))))))))..................**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902009
testis
 M023
head
.............................................................................................................................TGACAGACGGATGGACAGTATATTT.................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................TGAGATCGAGACCTTCATGCAGA.................................................................................................................................. 23 2 2 1.00 2 0 0 0 0 2 0 0 0 0 0
.....TGTGGGCGTGGCAGTTTTGGCCGG............................................................................................................................................................................................................................. 24 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0
..............................................................................................TTCTGAGATCGAGACCTTCATACGGA.................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TGACAGACGGATGGACAGTATATT..................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TGACAGACGGATGGACAGTATATTTGGC................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTTAGTCGGGCCATGTACAAGCACC.............................. 27 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0
..............................................................................................TTCTGAGATCGAGACCTTCATACGG................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................TCTGACAGACGGATGG............................................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................TGAGATCGAGACCTTCATACGGACGG............................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCTGACAGACGGATGGACAGTATATT..................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................TGAGATCGAGACCTTCATACGGACGGT.............................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TACGGACGGTCTGACAGACGGATGGAC............................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTTAGTCGGGCCATGTACAAGC................................. 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................TTCTATCTTTTTAGTCGGGCCAT......................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
AGAAGTGTGGGCGTGGCAGTTTTGG................................................................................................................................................................................................................................. 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................TGAGATCTAGACCTTCATACGGAC................................................................................................................................. 24 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.......TGGGCGTGGCAGTTTTGGCCGGTTT.......................................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.......TGGGCGTGGCAGTTTTGGCCGGT............................................................................................................................................................................................................................ 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......TGGGCGTGGCAGTTTTGGCC............................................................................................................................................................................................................................... 20 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0
.......TGGGCGTGGCAGTTTTGGCCGGG............................................................................................................................................................................................................................ 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......TGGGCGTGGCAGTTTTGGCCGG............................................................................................................................................................................................................................. 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
AGAAGTGTGGGCGTGGCAGTT..................................................................................................................................................................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......TGGGCGTGGCAGTTTTGGCCG.............................................................................................................................................................................................................................. 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....TGTGGGCGTGGCAGTTTTGGC................................................................................................................................................................................................................................ 21 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0
AGAAGTGTAGGCGTGGCAGTTT.................................................................................................................................................................................................................................... 22 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...............GCAGTTATGGCCGGTT........................................................................................................................................................................................................................... 16 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0
.GGAGTGTGGGTGTGGCAGTTT.................................................................................................................................................................................................................................... 21 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................CGCAAGACTGGGCACTAC.......... 18 3 20 0.10 2 0 0 0 0 0 0 0 2 0 0
.........................................................................................ACAGTTTCTGAGATCGAGACATT.......................................................................................................................................... 23 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................TTCTGAGATCGAGACGTTCATACGGAC................................................................................................................................. 27 1 15 0.07 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................TTCTGAGATCGAGACGTTCATACGG................................................................................................................................... 25 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................ATAGTTCCTGAGATCGAGACCTTCAT....................................................................................................................................... 26 1 17 0.06 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................TTCTGAGATCGAGACGTTCATAC..................................................................................................................................... 23 1 19 0.05 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................ATCGCTTCATCTTCGGTCT........................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.............................TTTGTGGGCGTGGCAACA........................................................................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCTTCACACCCGCACCGTCAAAACCGGCCAAACACCCGCACCGTTGTAAACCTTTGTTTAAACGCGGATTAGAATTGTAAGATCGGAAATATCAAAGACTCTAGCTCTGGAAGTATGCCTGCCAGACTGTCTGCCTACCTGTCATATAAACCGAAGGTCTTATGCAAAATAATTATAGCGAATTAGAAGATAGAAAAATCAGCCCGGTACATGTTCGTGGTTGCGCTCTGACCAGTGGTGTTAACCGGTA
****************************************************************************************************.((((...((.((((((((....))).)))))))))))..................********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M023
head
.........................................................TTAAACGCGGATTAGAATTGTAAGATC...................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................CCTCTGGCTCTGGAAGTGTGC.................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................AAAAATCTGCCCGGTATAT...................................... 19 2 3 0.33 1 0 0 1 0 0 0 0
...............................................................................AGATCGGAATTATCAGAGACTCT.................................................................................................................................................... 23 2 4 0.25 1 0 0 0 1 0 0 0
..........................................GTTGTAGGCCTTTTTTTAAAC........................................................................................................................................................................................... 21 3 12 0.17 2 0 0 0 0 2 0 0
....................................................................TCAGAATTGTAAGATC...................................................................................................................................................................... 16 1 9 0.11 1 0 0 0 0 0 1 0
........................................CAGTTGTAAACCTTTGTT................................................................................................................................................................................................ 18 1 11 0.09 1 0 0 0 0 0 0 1
..............................................................................................AAGACTCTAGCTCTGCAAGTATGCCT.................................................................................................................................. 26 1 15 0.07 1 0 0 1 0 0 0 0
.......................................ACCGTTGTAAACATT.................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:19698878-19699127 - dsi_26259 AGAAGTGTGGGCGTG-------GCAGTTTTGGCCGGTTTGTG------------GGCGTGGCAACATTTGGAAA-CAAATTTGC----------------------------GCCTAATCTTAACATTCTAGCCTTTA---TAGTTTCTGAGATCGAGACCTTCATACGGACGGTCTGACAGACGGATGG--------ACA------------------------------------GTATATTTGGCTTCCAGAATACGTTTT----------------------ATTAATAT-------------C----------GCTTAATCTTCTATCTTTTTAGTCGGGCCATGTACA--AGC----ACCAACGCGAGACTGGTCACCACAATTGGCCAT
droSec2 scaffold_8:3253898-3254175 - AGAAGTGTGGGCGTG-------GCAGTTTTGGCCGGTTTGTG------------GGCGTGGCAACATTTGGAAA-CAAATTTGCGCTGCGACTATGTCTCTTTAAGCTGCATGCCTAATCTTAACATTCTAGCCTTTA---TAGTTTCTGAGATCGAGACCTTTATACGGAGGGTCTGACAGACGGATGG--------ACA------------------------------------GTATATTTGGGTTCCAGAATACGTTTT----------------------ATTAATAT-------------C----------GCTTAATCTTCTATCTTTTTAGTCGGGCCATGTACA--AGC----ATCAACGCGTGACTGGTCACCACAATTGGCCAC
dm3 chr3L:22275049-22275252 + AAAATTGTTTTATTTGCGCGTGGCAGTTTTGA-----TT-----------------ATTGGCAACATCTGGAAT-CA-----------------------------------GCCTAATCTCAACATTCGAGCTTTTA---TAGGTCCTGAGATCGAGTAGTTCATACGGACAGAAGAACAAAC------------GAACATGGCTATATGGCATC-----------------------------------CAAAATA-----------------------------------------ACACTTCACTCTACCTGTTACATACTTTTCAATGATTCTAGTGAACCCTTTTAC-------------------------------------------
droEre2 scaffold_4929:23664595-23664844 - AAATTTGTTGCCATG-------GCAGTTTAGGACGGATTGTG------------GGCTTGGCAAAATCAAAA--------------------------------AT-------CTTAGTTTAAACTTTCTAACTTTTA---TAGTTCCTAGGATCCAGACGTTCATACGGACAGTCGGACGA----------------ACATGGCCAAATCGATTCCGCTTTTGATCCTGATGAAGAATTT------------------ATATA--------------------------------GATACGCTTTTAT-----------TTACTTTTGAGTCTATTAAATGGACCTTTGTAG--TAACTAAGACCAACGCTAAATGGATTTTGGCAATT------
droYak3 2L:21533574-21533803 - AAAAGTGTAGTCGTG-------TCAGTTTTGTGCGGTTTGTG------------GGCGTGGCAACA-----------AACCTTCGCAGAGGCG-------------------------------GTCACTCGTTTTTA---TAGTTTCTGAGATATCAATGTTCATTCGGACGAACGGACAGGC------------GGACATGGCCATTGCC---------------------------------------------------ACTTTATATGGT-------------------CGGAAAAGCTTCCATTTACTTGTTACTTACTTTTTAACGAATCTAGTATAGCCTTTTACAGTAAC----AGTAACGAGTGACAGGT----------------
droEug1 scf7180000409915:253-445 - AGAG------------------------------------------------TGGGCGTGGCAGGATGCT------AAGCTTGCGTTGCGTAGGGACCTCAAGAATCTTCATGCTTAATCTCAACTTTGTATCTGGTA---TAGTTCCTGAGATCTCAGCGTTCATACGGACGGACGGACGGACAGACGG--------TCACAGTTCAATCGACTTCGCTATTGATACTGATCAATAATAT------------------ATATAGTTTATAGGGT-------------------C-----------------------------------------------------------------------------------------------------
droBia1 scf7180000301145:61409-61597 + T-----GTGGCCGCC-------ACAGTTTTGGGCGCTCTGTG------------CATG---------------------------------------CCCAGGAATTTGAATGCCAAGTCAGCCTGTTCTAGCTCTTA---TAGTTTCCGAAATCTCAGCGTTCATACTGACAGACGGACAGAC------------GGACATGGCTAGATCGACTCGGCTAGTGATGCTGAATC--------------------------------CTATCCT-------------AT------CGGAATCGCTTCCTTCTA-------------------CCTGTT-----------------------------------------------------------
droTak1 scf7180000414358:6992-7266 + AAAACTGTGGGCGCC-------ACGGCTTT-TTCGGTTTGTGGGCGTTAGAGGGGGAGTGGCACCATGATAAAA-TAAACTTGCGCTGCGTAGAAAGCCCAAGAATATGTGTAGGAAATCCCAACCTTCTAGCTTTTG---TGGTTTCCGAGATCTCAGCGTTCATACAGACAGACAGACGG----------------ACATGGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAATAT------------------ATGTACTTTATGGGGT-------------------CGGAAACGCTTCTTTTTAGCTGTTCCATACTTTTGCACGAATACAA--------------------------------------------------------
droEle1 scf7180000491024:163135-163340 - AGATTTGTGGGCGTA---------------------------------AGAGTGGGCGTGGCTCCAT---------AAACTTGCGCTACTTAGGAACTACAAGAATCTGCATGCCAAGTCCCA--TCTCTAGCTCTTA---TAGTTTCTGAGATCTCAACTTTCATACAGACGGACTGACGGTCAGACAAAC----GGAAATGGCTAGATCC-----------------GATCAAGAATAT------------------ATATACTTTATATGGT-------------------CGGATATGCATTCTT--------------------------CT-----------------------------------------------------------
droRho1 scf7180000777163:1077-1292 - AAAACTGTGGCCAC----------AGCTT---GTGGCTTGTGGGCGTCAGAGGGGGCGTGGCACCATTTTGAAA-CAAACTTGCGCTGCGTAGGAACTCCTAAAATCTACATGCAAAATGCCAATCTTCTAGCTTTTA---TAGTTTCCGAGATGTCAGCGTTCATACGGACAGACAGACAAGAACA-----------------------------------------------AGAATAT------------------ATATACTTTATAGGGTCGACACGGTTAATTAATTC-------------G----------GCT---------------------------------------------------------------------------
droFic1 scf7180000453955:772874-772969 + A----------------------------------------------------------------------------------------------------------------------------------GCTTTTA---TCGTTTCCGAAATTCCGACTTTCATACATACAAACAGACAGAA------------AGACATGGCTTTATAGATTCGTCTGACAATCCTTTTTAATAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302395:364351-364384 - CATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGGAGACAGGACACCACAGCTGGTCAC
droAna3 scaffold_12647:4490-4576 + G-----------------------------------------------------GGCGTGGCAAAATTTTGTGA-T---------------------------------------AATTCTGATAGCTCTATATCTTA---TAGCCTCTGAGATCGACGTGTTCATAAATACAG-----CAAAC------------GAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395662:1930-2065 + AGAATTACGCAA-----------TATGTTTGGGCG-------------CGAAGGGGCGTGACAAAATTTTGAAA-CAAACT-------------------------CTCCATGCCGAATCTTATAGCTCTATCTCTTATAGTAGTCTCTGAGATCCACGCGTTCATACGGACAGACTCAAAGACGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3b:214673-214839 + AAAATTATGGATGCC-------ACAGACTTTCGTGGTTTGTGACTGCAGAAGGGGGCGGGGCAAAATTTTGATATCACAGT--------------------------CACAT--ACAGTCTGGTTGCTCTAGCT-TAA---TAGTCTTTGAGATCTAGGCGCTCATCGGGAGGGACACACGGACGGACGGACAGACATA--------------CTTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_56:241005-241171 + AAAATTATGGATGCC-------ACAGACTTTCGTGGTTTGTGACTGCAGAAGGGGGCGGGGCAAAATTTTGATATCACAGT--------------------------CACAT--ACAGTCTGGTTGCTCTAGCT-TAA---TAGTCTTTGAGATCTAGGCGCTCATCGGGAGGGACACACGGACGGACGGACAGACATA--------------CTTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004967:1988726-1988956 - CAAATTGCGGGGGCG---------------------------------GAAAGGGGCGTGGCAAAAATTTGAAA-TAAACTTGATCACTTTACATACTACACGAGTCTACATACCAAATTTGGTAGCTCTAGCTTTTA---CAGTCTCCGAGATCTCGGTGTTCATACGGACAGACGGACGGACAGAC--------GGACATGGCTAGATCGACTCGGTTGTAGATGCTGATCAAGAATAT------------------AAGTT----------------------AATAATTT-------------C----------G-TTGCTTTCCAATTTATTTAG--------------------------------------------------------
droVir3 scaffold_13047:2642383-2642498 + CGATTTTTATCGAT------------------------------------------------------------------------TGCTTGGAAACGGAAACAACCTAC--ATCTAATTTCAAGTTTTTAGCTGTTA---TAGGCTCTGAGATCCTTGCACTCATACATACGGACAGACAGACAGACGG--------ACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:5346389-5346518 + AAT-------------------------------------------------------------------------------------------------------------------CTTCAGCTCTCTAGCTCTTA---CATCTTCTGAGATCAACTTGCTCATACGGACAGACGGACAAAC------------GGACAGGGCTACATCGACTCGGCTTAT-----------------------------GTAGTATG---T----------------------ATTAATTT-------------C----------AATTAATATTATATGTTTT-----------------------------------------------------------
droGri2 scaffold_15110:22901724-22901798 - TA-------------------------------------------------------------------------------------------------------------CGCCAAATTTAAAGTCTCTAGCCCTTA---TAGTCTCTGAGATCTGCGTGTTCATACAGACGGACGGACAGACGG------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAAGTGTGGGCGTG-------GCAGTTTTGGCCGGTTTGTG------------GGCGTGGCAACATTTGGAAA-CAAATTTGC----------------------------GCCTAATCTTAACATTCTAGCCTTTA---TAGTTTCTGAGATCGAGACCTTCATACGGACGGTCTGACAGACGGATGG--------ACA------------------------------------GTATATTTGGCTTCCAGAATACGTTTT----------------------ATTAATAT-------------C----------GCTTAATCTTCTATCTTTTTAGTCGGGCCATGTACA--AGC----ACCAACGCGAGACTGGTCACCACAATTGGCCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................TGACAGACGGATGG--------ACA------------------------------------GTATATTT.......................................................................................................................................................2512.00200000000200000000
.....TGTGGGCGTG-------GCAGTTTTGGCCGG........................................................................................................................................................................................................................................................................................................................................................................2431.00300000000003000000
.................................................................................................................................................TTCTGAGATCGAGACCTTCATACGGA.................................................................................................................................................................................................................................2611.00100000010000000000
................................................................................................................................................................................TGACAGACGGATGG--------ACA------------------------------------GTATATT........................................................................................................................................................2411.00100000000000010000
................................................................................................................................................................................TGACAGACGGATGG--------ACA------------------------------------GTATATTTGGC....................................................................................................................................................2811.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................TTTTTAGTCGGGCCATGTACA--AGC----ACC..............................2721.00200000020000000000
.................................................................................................................................................TTCTGAGATCGAGACCTTCATACGG..................................................................................................................................................................................................................................2511.00100000001000000000
..............................................................................................................................................................................TCTGACAGACGGATGG--------......................................................................................................................................................................................................1611.00100000000001000000
....................................................................................................................................................TGAGATCGAGACCTTCATACGGACGG..............................................................................................................................................................................................................................2611.00100000000100000000
..............................................................................................................................................................................TCTGACAGACGGATGG--------ACA------------------------------------GTATATT........................................................................................................................................................2611.00100000010000000000
....................................................................................................................................................TGAGATCGAGACCTTCATACGGACGGT.............................................................................................................................................................................................................................2711.00100000000100000000
.....................................................................................................................................................................TACGGACGGTCTGACAGACGGATGG--------AC....................................................................................................................................................................................................2711.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................TTTTTAGTCGGGCCATGTACA--AGC----.................................2420.50100000010000000000
......................................................................................................................................................................................................................................................................................................................................TTCTATCTTTTTAGTCGGGCCAT...............................................2320.50100000000100000000
AGAAGTGTGGGCGTG-------GCAGTTTTGG............................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
.......TGGGCGTG-------GCAGTTTTGGCCGGTTT.....................................................................................................................................................................................................................................................................................................................................................................2530.33100000000000010000
.......TGGGCGTG-------GCAGTTTTGGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................2330.33100000000001000000
.......TGGGCGTG-------GCAGTTTTGGCC..........................................................................................................................................................................................................................................................................................................................................................................2060.33200000000002000000
.......TGGGCGTG-------GCAGTTTTGGCCGGG.......................................................................................................................................................................................................................................................................................................................................................................2340.25100000000001000000
.......TGGGCGTG-------GCAGTTTTGGCCGG........................................................................................................................................................................................................................................................................................................................................................................2240.25100000000001000000
AGAAGTGTGGGCGTG-------GCAGTT................................................................................................................................................................................................................................................................................................................................................................................2140.25100000000001000000
.......TGGGCGTG-------GCAGTTTTGGCCG.........................................................................................................................................................................................................................................................................................................................................................................2150.20100000000001000000
.....TGTGGGCGTG-------GCAGTTTTGGC...........................................................................................................................................................................................................................................................................................................................................................................2180.13100000000001000000
....................................TTTGTG------------GGCGTGGCAACA..........................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
droSec2
AGAAGTGTGGGCGTG-------GCAGTTTTGGCCGGTTTGTG------------GGCGTGGCAACATTTGGAAA-CAAATTTGCGCTGCGACTATGTCTCTTTAAGCTGCATGCCTAATCTTAACATTCTAGCCTTTA---TAGTTTCTGAGATCGAGACCTTTATACGGAGGGTCTGACAGACGGATGG--------ACA------------------------------------GTATATTTGGGTTCCAGAATACGTTTT----------------------ATTAATAT-------------C----------GCTTAATCTTCTATCTTTTTAGTCGGGCCATGTACA--AGC----ATCAACGCGTGACTGGTCACCACAATTGGCCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
AAAATTGTTTTATTTGCGCGTGGCAGTTTTGA-----TT-----------------ATTGGCAACATCTGGAAT-CA-----------------------------------GCCTAATCTCAACATTCGAGCTTTTA---TAGGTCCTGAGATCGAGTAGTTCATACGGACAGAAGAACAAAC------------GAACATGGCTATATGGCATC-----------------------------------CAAAATA-----------------------------------------ACACTTCACTCTACCTGTTACATACTTTTCAATGATTCTAGTGAACCCTTTTAC-------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGTAGT..........................................................................................................................................................................................................................................261128.00128000000000000000000000110000000000000001041003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010220002211001700000000000000000000000000000000000010070000800000370051000000000300022100000000000000000000000000000000000000000000000000000000000000000032010000004011000000000000000100000000
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGTAG...........................................................................................................................................................................................................................................25115.00150000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000004110000000000000000000000000000000000000000000001020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000000000000000
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGTAGTT.........................................................................................................................................................................................................................................27111.00110000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010100000000000000000000000000000000000000000000000010000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------GAA.....................................................................................................................................................................................................2518.0080000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................................................TACGGACAGAAGAACAAAC------------GAACATGGC...............................................................................................................................................................................................2818.0080000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGT.............................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000102001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................TTTTCAATGATTCTAGTGAACCCTTT..............................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010100120000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTACATACTTTTCAATGATTCTAGT.......................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................TTA---TAGGTCCTGAGATCGAGTAGT..........................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................TTCATACGGACAGAAGAACAAAC------------GAA.....................................................................................................................................................................................................2615.0050000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................TACTTTTCAATGATTCTAGTGAACCC.................................................2614.0040000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGTA............................................................................................................................................................................................................................................2414.0040000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATACGGACAGAAGAACAAAC------------G.......................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTTA---TAGGTCCTGAGATCGAGTAGT..........................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000200000
.................................................................................................................................................................................................................................................................................................................................TACTTTTCAATGATTCTAGTGAAC...................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------GAAC....................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------GAACA...................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGTAT...........................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTTCATACGGACAGAAGAACAAAC------------GAA.....................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................AC------------GAACATGGCTATATGGC.......................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTCATACGGACAGAAGAACAAAC------------GAACA...................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------........................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TACTTTTCAATGATTCTAGTGAA....................................................2312.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TTTCAATGATTCTAGTGAACCCTTT..............................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAAAATA-----------------------------------------ACACTTCACTCTACCTGT...............................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTACATACTTTTCAATGATTCTAG........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AAC------------GAACATGGCTATATGGCATC-----------------------------------CAAT.............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TA---TAGGTCCTGAGATCGAGTT............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATACGGACAGAAGAACA.......................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTCACTCTACCTGTTACATACT.......................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TACTTTTCAATGATTCTAGTGAACCCTT...............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TACGGACAGAAGAACAAAC------------GAACATGG................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTCACTCTACCTGTTACATA.........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GACAGAAGAACAAAC------------GAA.....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................TC-----------------------------------CAAAATA-----------------------------------------ACACTTCACTCTACC..................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTCAATGATTCTAGTGAACCCTTT..............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................A---TAGGTCCTGAGATCGAGTAGTTCA.......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TCTGGAAT-CA-----------------------------------GCCTAATCTCAACATTCG..........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................TTCATACGGACAGAAGAAC........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTTTCAATGATTCTAGTGAACCCT................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATACGGACAGAAGAACAAAC------------GAACATGGCTATA...........................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATACGGACAGAAGAACAAAC------------GAACATGGC...............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATACGGACAGAAGAACAAAC------------........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAAC........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATACGGACAGAAGAACAAAC------------GAA.....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTATTTGCGCGTGGCAGTTTTGA-----T......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ATC-----------------------------------CAAAATA-----------------------------------------ACACTTCACTCTACCTGT...............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TATGGCATC-----------------------------------CAAAATA-----------------------------------------ACACTTCACTC......................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AC------------GAACATGGCTATATGGCAT.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TATATGGCATC-----------------------------------CAAAATA-----------------------------------------ACACTTCAC........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATACGGACAGAAGAACAAAC------------GA......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TTTCAATGATTCTAGTGAACCCT................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TGAGATCGAGTAGTTCATACGGACAGA.............................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................TC-----------------------------------CAAAATA-----------------------------------------ACACTTCACTCTACCTGT...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TACATACTTTTCAATGATTCT..........................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TTTCAATGATTCTAGTGAACCCTTTTA............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------GAAA....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------GA......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTTTCAATGATTCTAGTGAACCCTTTTAC-------------------------------------------2911.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATACGGACAGAAGAACAAAC------------GAACAT..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCTACCTGTTACATACTTTTCAATGAT.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTTTA---TAGGTCCTGAGATCGAGTAGTTC........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGAACAAAC------------GAC.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCACTCTACCTGTTACATACTTTTCAAT................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TTTCAATGATTCTAGTGAAGA..................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................AGCTTTTA---TAGGTCCTGAGAT..................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................GCTTTTA---TAGGTCCTGAGA...................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCTACCTGTTACATACTTTTC...................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACGGACAGAAGATG........................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGTTTTATTTGCGCGTTC.....................................................................................................................................................................................................................................................................................................................................................................................18190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTACCTGTTACATACTTTTCA..................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGTTACATACTTTTCAATGC..............................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTACCTGTTACATACTTTTCAA.................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAATTTGTTGCCATG-------GCAGTTTAGGACGGATTGTG------------GGCTTGGCAAAATCAAAA--------------------------------AT-------CTTAGTTTAAACTTTCTAACTTTTA---TAGTTCCTAGGATCCAGACGTTCATACGGACAGTCGGACGA----------------ACATGGCCAAATCGATTCCGCTTTTGATCCTGATGAAGAATTT------------------ATATA--------------------------------GATACGCTTTTAT-----------TTACTTTTGAGTCTATTAAATGGACCTTTGTAG--TAACTAAGACCAACGCTAAATGGATTTTGGCAATT------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................TAACTAAGACCAACGCTAAATGGAT................2515.0050000005
...................................................................................................................................................................................................................................................................................................................................................................TAACTAAGACCAACGCTAAATGGATT...............2613.0033000000
......................................................................................................................................................................................................................TCCGCTTTTGATCCTGATGAAGAATT............................................................................................................................................................2620.5011000000
droYak3
AAAAGTGTAGTCGTG-------TCAGTTTTGTGCGGTTTGTG------------GGCGTGGCAACA-----------AACCTTCGCAGAGGCG-------------------------------GTCACTCGTTTTTA---TAGTTTCTGAGATATCAATGTTCATTCGGACGAACGGACAGGC------------GGACATGGCCATTGCC---------------------------------------------------ACTTTATATGGT-------------------CGGAAAAGCTTCCATTTACTTGTTACTTACTTTTTAACGAATCTAGTATAGCCTTTTACAGTAAC----AGTAACGAGTGACAGGT----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................GACGAACGGACAGGC------------GGACATGGC...............................................................................................................................................................................................2430.33100100000000
.........................GTTTTGTGCGGTTTGTG------------GG....................................................................................................................................................................................................................................................................................................................................................19200.05100000010000
droEug1
AGAG------------------------------------------------TGGGCGTGGCAGGATGCT------AAGCTTGCGTTGCGTAGGGACCTCAAGAATCTTCATGCTTAATCTCAACTTTGTATCTGGTA---TAGTTCCTGAGATCTCAGCGTTCATACGGACGGACGGACGGACAGACGG--------TCACAGTTCAATCGACTTCGCTATTGATACTGATCAATAATAT------------------ATATAGTTTATAGGGT-------------------C-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
T-----GTGGCCGCC-------ACAGTTTTGGGCGCTCTGTG------------CATG---------------------------------------CCCAGGAATTTGAATGCCAAGTCAGCCTGTTCTAGCTCTTA---TAGTTTCCGAAATCTCAGCGTTCATACTGACAGACGGACAGAC------------GGACATGGCTAGATCGACTCGGCTAGTGATGCTGAATC--------------------------------CTATCCT-------------AT------CGGAATCGCTTCCTTCTA-------------------CCTGTT-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAACTGTGGGCGCC-------ACGGCTTT-TTCGGTTTGTGGGCGTTAGAGGGGGAGTGGCACCATGATAAAA-TAAACTTGCGCTGCGTAGAAAGCCCAAGAATATGTGTAGGAAATCCCAACCTTCTAGCTTTTG---TGGTTTCCGAGATCTCAGCGTTCATACAGACAGACAGACGG----------------ACATGGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAATAT------------------ATGTACTTTATGGGGT-------------------CGGAAACGCTTCTTTTTAGCTGTTCCATACTTTTGCACGAATACAA--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGATTTGTGGGCGTA---------------------------------AGAGTGGGCGTGGCTCCAT---------AAACTTGCGCTACTTAGGAACTACAAGAATCTGCATGCCAAGTCCCA--TCTCTAGCTCTTA---TAGTTTCTGAGATCTCAACTTTCATACAGACGGACTGACGGTCAGACAAAC----GGAAATGGCTAGATCC-----------------GATCAAGAATAT------------------ATATACTTTATATGGT-------------------CGGATATGCATTCTT--------------------------CT-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAAACTGTGGCCAC----------AGCTT---GTGGCTTGTGGGCGTCAGAGGGGGCGTGGCACCATTTTGAAA-CAAACTTGCGCTGCGTAGGAACTCCTAAAATCTACATGCAAAATGCCAATCTTCTAGCTTTTA---TAGTTTCCGAGATGTCAGCGTTCATACGGACAGACAGACAAGAACA-----------------------------------------------AGAATAT------------------ATATACTTTATAGGGTCGACACGGTTAATTAATTC-------------G----------GCT---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A----------------------------------------------------------------------------------------------------------------------------------GCTTTTA---TCGTTTCCGAAATTCCGACTTTCATACATACAAACAGACAGAA------------AGACATGGCTTTATAGATTCGTCTGACAATCCTTTTTAATAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGGAGACAGGACACCACAGCTGGTCACSizeHit CountTotal NormTotal
No Reads
droAna3
G-----------------------------------------------------GGCGTGGCAAAATTTTGTGA-T---------------------------------------AATTCTGATAGCTCTATATCTTA---TAGCCTCTGAGATCGACGTGTTCATAAATACAG-----CAAAC------------GAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................A---TAGCCTCTGAGATCGACGTGT..........................................................................................................................................................................................................................................2211.001000010
droBip1
AGAATTACGCAA-----------TATGTTTGGGCG-------------CGAAGGGGCGTGACAAAATTTTGAAA-CAAACT-------------------------CTCCATGCCGAATCTTATAGCTCTATCTCTTATAGTAGTCTCTGAGATCCACGCGTTCATACGGACAGACTCAAAGACGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAAATTATGGATGCC-------ACAGACTTTCGTGGTTTGTGACTGCAGAAGGGGGCGGGGCAAAATTTTGATATCACAGT--------------------------CACAT--ACAGTCTGGTTGCTCTAGCT-TAA---TAGTCTTTGAGATCTAGGCGCTCATCGGGAGGGACACACGGACGGACGGACAGACATA--------------CTTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................GTTTGTGACTGCAGAAGG.......................................................................................................................................................................................................................................................................................................................................................1811.0010000000001
...............................CGTGGTTTGTGACTGCAGAAGGGG.....................................................................................................................................................................................................................................................................................................................................................2411.0010000000010
droPer2
AAAATTATGGATGCC-------ACAGACTTTCGTGGTTTGTGACTGCAGAAGGGGGCGGGGCAAAATTTTGATATCACAGT--------------------------CACAT--ACAGTCTGGTTGCTCTAGCT-TAA---TAGTCTTTGAGATCTAGGCGCTCATCGGGAGGGACACACGGACGGACGGACAGACATA--------------CTTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CAAATTGCGGGGGCG---------------------------------GAAAGGGGCGTGGCAAAAATTTGAAA-TAAACTTGATCACTTTACATACTACACGAGTCTACATACCAAATTTGGTAGCTCTAGCTTTTA---CAGTCTCCGAGATCTCGGTGTTCATACGGACAGACGGACGGACAGAC--------GGACATGGCTAGATCGACTCGGTTGTAGATGCTGATCAAGAATAT------------------AAGTT----------------------AATAATTT-------------C----------G-TTGCTTTCCAATTTATTTAG--------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................T----------------------AATAATTT-------------C----------G-TTGCTTTCCAATT...............................................................24200.501006040
............................................................................................................................................................CGGTGTTCATACGGACAGACGGACG.......................................................................................................................................................................................................................2520.50101000
................................................................................................................................................................................................................................................................................................TAATTT-------------C----------G-TTGCTTTCCAATTTATT...........................................................25200.40803050
........................................................................................................................................TA---CAGTCTCCGAGATCTCGGT............................................................................................................................................................................................................................................2130.33101000
......................................................................................................................................................................................................................................................................TT----------------------AATAATTT-------------C----------G-TTGCTTTCCAATT...............................................................25200.30602040
.......................................................................................................................................................................................................................................................................T----------------------AATAATTT-------------C----------G-TTGCTTTCCAATTTA.............................................................26200.10201010
......................................................................................................................................................................................................................................................................TT----------------------AATAATTT-------------C----------G-TTGCTTTCCAATTTAT............................................................28200.10201010
......................................................................................................................................................................................................................................................................TT----------------------AATAATTT-------------C----------G-TTGCTTTCCAATTTA.............................................................27200.10201010
................................................................................................................................CTAGCTTTTA---CAGTCTCCGAG....................................................................................................................................................................................................................................................21200.10200002
......................................................................................................................................................................ACGGACAGACGGACGGACAGAC--------GGA.....................................................................................................................................................................................................25200.05100001
................................................................................................................................................................................................................................................................................................TAATTT-------------C----------G-TTGCTTTCCAATT...............................................................21200.05110000
.......................................................................................................................................................................................................................................................................T----------------------AATAATTT-------------C----------G-TTGCTTTCC...................................................................20200.05100010
................................................................................................................................................................................................................................................................................................TAATTT-------------C----------G-TTGCTTTCCAATTTAT............................................................24200.05100010
......................................................................................................................................................................................................................................................................TT----------------------AATAATTT-------------C----------G-TTGCTT......................................................................18200.05100010
................................................................................................................................................................................................................................................................................................TAATTT-------------C----------G-TTGCTTTCCAATTTA.............................................................23200.05100010
..............................................................................................................................................................................................................................................................................................AATAATTT-------------C----------G-TTGCTTTCCAATTTATT...........................................................27200.05101000
.......................................................................................................................................................................CGGACAGACGGACGGACAGAC--------GG......................................................................................................................................................................................................23200.05100001
.................................................................................................................................................................................................................................................................................................AATTT-------------C----------G-TTGCTTTCCAATTTAT............................................................23200.05101000
.......................................................................................................................................................................................................................................................................T----------------------AATAATTT-------------C----------G-TTGCTTTCCAATTTAT............................................................27200.05101000
droVir3
CGATTTTTATCGAT------------------------------------------------------------------------TGCTTGGAAACGGAAACAACCTAC--ATCTAATTTCAAGTTTTTAGCTGTTA---TAGGCTCTGAGATCCTTGCACTCATACATACGGACAGACAGACAGACGG--------ACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................TTA---TAGGCTCTGAGATCCTTGC............................................................................................................................................................................................................................................22200.255001000000000000000000000000040000000000000000000000000000000000
.................................................................................................................................................................CTCATACATACGGACAGACAG......................................................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CTCATACATACGGACAGACAGACAGAC................................................................................................................................................................................................................2760.171100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TACATACGGACAGACAGACAG..................................................................................................................................................................................................................21200.153000000000000000000000000100010000000100000000000000000000000000
............AT------------------------------------------------------------------------TGCTTGGAAACGGAAA......................................................................................................................................................................................................................................................................................................18180.112000000000000000000000000000010000010000000000000000000000000000
..................................................................................................................................................................TCATACATACGGACAGACAGACA...................................................................................................................................................................................................................23200.102000000000000100000000000000000010000000000000000000000000000000
.......................................................................................................................................TTA---TAGGCTCTGAGATCCTTG.............................................................................................................................................................................................................................................21200.102000000000000000000000000000000100000000100000000000000000000000
......TTATCGAT------------------------------------------------------------------------TGCTTGGAAACGG.........................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000020000000000000000000000000000000000
........ATCGAT------------------------------------------------------------------------TGCTTGGAAACG..........................................................................................................................................................................................................................................................................................................18200.102000000020000000000000000000000000000000000000000000000000000000
........ATCGAT------------------------------------------------------------------------TGCTTGGAAACGGAAA......................................................................................................................................................................................................................................................................................................22170.061000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCATACATACGGACAGACAGACAGAC................................................................................................................................................................................................................26200.051100000000000000000000000000000000000000000000000000000000000000
.....TTTATCGAT------------------------------------------------------------------------TGCTTGGAAACG..........................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.GATTTTTATCGAT------------------------------------------------------------------------TGCTTGGA..............................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
.......TATCGAT------------------------------------------------------------------------TGCTTGGAAACG..........................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
........ATCGAT------------------------------------------------------------------------TGCTTGGAAACGG.........................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................ATACATACGGACAGACAGAC....................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................TACATACGGACAGACAGACAGACGG--------......................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
CGATTTTTATCGAT------------------------------------------------------------------------TGCTTG................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAT-------------------------------------------------------------------------------------------------------------------CTTCAGCTCTCTAGCTCTTA---CATCTTCTGAGATCAACTTGCTCATACGGACAGACGGACAAAC------------GGACAGGGCTACATCGACTCGGCTTAT-----------------------------GTAGTATG---T----------------------ATTAATTT-------------C----------AATTAATATTATATGTTTT-----------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................TCATACGGACAGACGGACAAAC------------GGAC....................................................................................................................................................................................................2640.251000010
.................................................................................................................................TAGCTCTTA---CATCTTCTGAGA...................................................................................................................................................................................................................................................21100.101100000
.................................................................................................................................................................CTCATACGGACAGACGGACA.......................................................................................................................................................................................................................20100.101000010
................................................................................................................................CTAGCTCTTA---CATCTTCTGAGT...................................................................................................................................................................................................................................................22150.071100000
droGri2
TA-------------------------------------------------------------------------------------------------------------CGCCAAATTTAAAGTCTCTAGCCCTTA---TAGTCTCTGAGATCTGCGTGTTCATACAGACGGACGGACAGACGG------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:24 PM