ID:

dsi_26220

 Coordinate:

2r:14079816-14080017 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-50.4 -50.3 -50.2

Flybase annnotation

exon [2r_14080018_14080246_+]; CDS [2r_14080018_14080199_+]; CDS [2r_14079683_14079815_+]; exon [2r_14079523_14079815_+]; intron [2r_14079816_14080017_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTACTAATGGACTGTGCCCTTTCCTTCGAAGGGGCGAAGATTAGCGCCGCACCACCATTCGTATCTATGGAGTATCAACTTTGGCGCGATATATTGTCTTTACCCATCGATATCTTATCTATGCCGGTCACTCGGCGGTCTTAGTCATGGAACCTGCTAATGGATTGTTATGTCGCACCATGCTATTTTCACTTTTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCC
**************************************************(((.((.(((((...((.(((((((((....))))))))).))))))).)))))....((((........))))((((.......(((.((((((((..((((.....((((.((..((......((((((....)))))).....))..)).))...)).....))))...)))))))).)))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 M024
male body		 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
GCTGAACACACAGATCGCC........................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................AATGTCCTCCTCGGCAGCTTCGTCTCCCT...................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TAATGGATTGTTATGTCGCACCATGC................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0
....................TATGTGAGCCGTGGGAAAAGGT.................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.........ACAGATCGCCATATGTGAGCC................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................TCAGTGAGTACTAATGGACTGTGC....................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................GGTCTTTCCTTCGAAGGG....................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 1 0 0 0
....AACACCCAGATCGCCA.......................................................................................................................................................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................GTCATCCTCGGCACCTT............................... 17 2 14 0.14 2 0 0 0 0 0 2 0 0
....................................................................................................................................CTTTGGCGAGATATA........................................................................................................................................................... 15 1 14 0.07 1 0 0 0 0 0 1 0 0
...GAACACAAAGATCGC............................................................................................................................................................................................................................................................................................ 15 1 18 0.06 1 0 0 0 0 0 0 1 0
.........................................................................................GGAGACTAACGCCGCACC................................................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GTCATCCTCGGCAGC................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................TGCAACGTGCTAATGGACT.................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGACTTGTGTGTCTAGCGGTATACACTCGGCACCCTTTTCCAGAAGGAGTCACTCATGATTACCTGACACGGGAAAGGAAGCTTCCCCGCTTCTAATCGCGGCGTGGTGGTAAGCATAGATACCTCATAGTTGAAACCGCGCTATATAACAGAAATGGGTAGCTATAGAATAGATACGGCCAGTGAGCCGCCAGAATCAGTACCTTGGACGATTACCTAACAATACAGCGTGGTACGATAAAAGTGAAAATCTACAGGAGGAGCCGTCGAAGCAGAGGGACTAGGAGATGCGTAGGAAACGG
**************************************************(((.((.(((((...((.(((((((((....))))))))).))))))).)))))....((((........))))((((.......(((.((((((((..((((.....((((.((..((......((((((....)))))).....))..)).))...)).....))))...)))))))).)))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
..............................................................................................................................................................................................................................................................................AGCAGAGGGACTAGGAGATGC........... 21 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................TTGGACGATTACCTATC................................................................................. 17 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................TTGGACGAGTACCTA................................................................................... 15 1 9 0.67 6 3 0 2 0 1
.......................................................................GGAAAGCATGCTTCCCC...................................................................................................................................................................................................................... 17 2 7 0.14 1 0 0 1 0 0
.................................................................................................................................................................GCTATAGAGAGGATACGGC.......................................................................................................................... 19 3 9 0.11 1 0 0 0 1 0
...............................................................................................................................................................................................CAGATTCGGTACCTTGG.............................................................................................. 17 2 10 0.10 1 0 0 0 1 0
..............................................................................................................................................................................TACGGACAGTGAGCCGCGTG............................................................................................................ 20 3 12 0.08 1 0 0 0 1 0
..............................................................................................................................................................................................................................................................................AGCAGGGGGACTAGGAGGTT............ 20 3 15 0.07 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14079766-14080067 + dsi_26220 GCTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTA--------CTAA---TGGACTGTGCCCTTT-----CCTTCGAA-GGGGCG--AAGA-------TTAGCGC----CGCACCACCATTCGT--------------------------------------------------------ATCTAT-GG-------AGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACCCATCGAT--------ATCTTATCTATGCCGGTCACTC-GG-C-----GGT----------CTTAGTCATGG-A-ACC-TG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCACCATGCTATT----------------------------------------------------------T----TCACTT--TTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCC
droSec2 scaffold_1:10931697-10932002 + ACTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTA--------CTAA---TGGACTGTGCCCTTTCCTTTCCTTCGAAAGG--CG--AAGA-------TTAGCGC----CGCACCACCATTCGT--------------------------------------------------------ATCTAC-GG-------AGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACTCATCGAT--------ATCTTATCTATGCCGGTCACTT-GG-C-----GGT----------CTTAGTCATGG-A-ACC-TG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATA-TCGCACCATGCTATT----------------------------------------------------------T----TCACTT--TTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCC
dm3 chr2R:13432076-13432376 + ACTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTA--------CTAA---TGGACGGTGCCCTTT-----CCATCGAAAGG--GA--AAGA-------TTAGCGC----CGCGCCACCATTCGT--------------------------------------------------------ATCTAC-GG-------AGTATCAACT-----------------------------TTAGCGCGATAT---ATTGTCTT------TACCCATCGAT--------ATCTTATCTATGCCGGTCACTC-GG-C-----GGT----------CTTAGTCATGG-A-ACC-AG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCAACATGCTATT----------------------------------------------------------T----TCACTT--TTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCC
droEre2 scaffold_4845:7659291-7659568 + ACTGAACACACAGATCGCCATCTGTGAGCCGTGGGAAAAGGTGTTCCTCCGTAAGTA--------CCTA---TGGACTGTGCCCTT----------GGA-AGG--GG------------------------------ACCATTCGA--------------------------------------------------------GTCTAC-AG-------GGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACGCATCGAT--------ATCTTATCTATGCCGGTCACTC-GG-C-----GGT----------CTTAGTCACGG-A-ACC-TG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCACCATGCTCTT----------------------------------------------------------T----TCACTT--TTAGATGTCCTTCTTGGCAGCTTTGTCTCCCTGATCCTCTACGCATCCTTTGCC
droYak3 2R:15754852-15755146 - GCTGAACACACAGATTGCCATCTGTGAGCCGTGGGAGAAGGTGTTTCTCAGTAAGTA--------CCAT---TGGACTGTGCCCTT----------GGAC-AGGGGG--AAGA-------TTAGGTC----CGC---ACCATTCGT--------------------------------------------------------ATCTAC-AG-------GGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACCCATCGAT--------ATCTTATCTATGCCGGTCACTTCGG-T-----GGT----------CTTAGTCTCGA-A-ACC-AG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCACCATGCTATT----------------------------------------------------------T----TCCATT--TTAGATGTCCTTCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCC
droEug1 scf7180000409672:1679283-1679596 - ACTGAACACGCAGATCGCCATCTGCGAACCCTGGGAAAAGGTGTTCCTAAGTAAGTA--------CTCCTTACGGCCCGTGCCCTC----------AGA-AAA--TG--AAGA-------TTAGCCC--ATCGC---ACCATACGT--------------------------------------------------------ATCTAC-AA-------AGTATCAGCT-----------------------------TTGGCACGATAT---ATTGTCTT------TACTCATCGAT--------ATCTTATCTATGCCGGTCAGTT----------GGT----------CTTAGTAATGG-A-ACA-GT-----------C-GGCGAACACCCGCCCT-------------------------------G---CTAATGGAT------TGCT-------------------ATG-TCTTACCAAGTTTTT--------------------------------------------------------TTT----TCTTTT--TTAGATGTCCTTCTAGGCAGTTGCGTTTCCCTTATCCTCTACGCATCCTATGCC
droBia1 scf7180000301754:5681432-5681750 + GCTGAACACGCAGATCGCCATCTGTGAGCCCTGGGAAAAGGTGTTCCTGAGTAAGTA--------GTCC--AGGGCTCGAGTCCCC----------GGGA-AG--GG--GAGA-------TTAGGGC-------------GTACAT--------------------------------------------------------ATCTAC-AAATAACAAAGT---AACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TGCTCATCGAT--------ATCTTATCTCGGCCGGTCGGTC-AGTC-----GGT----------CTTAGTCATTAGAAACC-AGT----------C-GACGAACAGCCGACCT-------------------------------G---CTAATGGAT------GGCTAC---------------ACATG-TCTCACCAGGCCTCT--------------------------------------------------------TCC----CCTCTT--CCAGACGTGCTCCTGGGCAGCTTTGTGTCCCTAATCCTCTACGCATCCGTCGCC
droTak1 scf7180000415138:306991-307290 - GCTGAACACACAGATCGCCATTTGTGAGCCCTGGGAAAAGGTGTTCTTAAGTAAGTA--------TTTA--AGGGCTTGTGTCCTC----------GG--------GA-GAGA-------TTATCAC----CTAGCC-------------------------------------------------------------------------------------ATAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACTCATCGAT--------ATCTTATCTTTGCCGGTCAGTC-GGTC-----GGT----------CTTAGTCATTTCA-ACG-GT-----------C-GGTGAACAGGCGACCA-------------------------------G---CTAATGGAT------TGCTAC---------------ACATG-TCTCACCAGGCTATTTTG-----------------------------------------------------TCT----TTTGTT--TTAGATGTTCTCCTCGGCAGCTGCGTCTCCCTGATCGTCTACGCATCCATCGCC
droEle1 scf7180000491214:852161-852476 - GCTGAACACACAGATCGCCATCTGCGAGCCCTGGGAGAAGGTCTTCCTGAGTAAGTA--------CTAA---GGACCCATGCCCTC----------G--------GG--AATA-------TTAGCGC-------A---CCATGCCAT----------------------------------------ACCATTCCAAGACGTATCTAC-AA-------AGTAACAACT--------------------------------------------GCTGTCTT------TACTCATCGAT--------ATCTTATCAACGCCGGTCAGTC-AGTC-----GGTGTCTTAGTGTCTTAGTCATGG-A-GC-----------------GGCGAACACCCGACTT-------------------------------G---CTTATGGAT------TGCGAC---------------G-ATA-TCTCACCAAGTTGTT----------------------------------------------------------T----TCCCTT--TCAGATGTCCTTCTGGGCAGCTGCGTCTCCCTGATCCTGTATGCAACCTTTGCC
droRho1 scf7180000778035:112178-112501 - ACTGAACACGCAGATCGCCATCTGTGAGCCCTGGGAGAAGGTGTTCCTCAGTGAGTATATTGGGTATT---GGGGCCCATGCCCGC----------G--------GG--AAGA-------TTAGCGCTCCTCGCACCACT-----------------------------------------------------CGTATCCGTATCTAC-AA-------AGTAACAACT-----------------------------TTGGCGCGATAT--TATTGTCTT------TACTCATCGAT--------ATCTTATCTATGCCGGTCAGTC-GG-T------GT----------CTTAGTCATGG-A-GCG-GCG----------C-GGCGAACACCCGACCT-------------------------------G---CTAATGGAT------AGCG-------------------ATA-ACTGACCAAGTAAAT----------------------------------------------------------T----TCCCTT--TCAGATGTCCTTCTGGGCAGCTGCGTGTCCCTGATCCTGTACGCGACCTTTGCC
droFic1 scf7180000453948:2022231-2022546 - GCTCAACACACAGATCGCCATCTGTGAGCCCTGGGAAAAGGTGTTCCTCAGTAAGTG--------TTCAGCAGGGCCCGTGTCCTC----------G--------CC--AAGA-------TTAGGT-----CGCGCCACTATACGT--------------------------------------------------------ATCTAC-AA-------AGTAACAACT-----------------------------TTGGCGCGGTAT--TATTGTCTT------TGCTCATCGAT--------ATCTTATCTGTGCCGGTCAGTC-G---------GT----------CTTAGTCATGG-A-GC-----------------GGCGAACACCCGACGT-------------------------------G---CTAATGGAT------GGCC-------------------ATG-TCTCATCGAGTAATG-TGTGTCTCCGG---------------------------------------------TC----TCTCTT--TCAGATGTCCTTCTGGGCAGCTTTGTCTCCTTGATCCTCTACGCTTCATTTGCC
droKik1 scf7180000302476:3247878-3248152 + GCTGAACACACAGATCGCCATCTGTGAGCCCTGGGAGAAGGTTTTCCTCAGTGAGTA--------CTTG---TCCAC--------------------------------------------------------------CTACGCATCCCGCAC----ATACCC--------------------------------------ACATAC-AA-------G--------------------------------------TTGTCGCAATTTGTGATTGTCTT------TGCTCATCGAT--------ATCTTATCTGCGCCGGTCGTTC-GTTCGGTCA---GTTTGCGGGTCTTAGTCATAG-G-CGC-AG----------------------------------------------------------------CAAAAGAAT------AACA-------------------GT--------CCTCCCGCT----------------------------------------------------------T----TCTCTTCCACAGACGTCCTGCTCGGATCCTGTATGTCCCTCATCCTGTACGCCTCCTTCGCC
droAna3 scaffold_13266:14741576-14741906 - ACTGAACACCCAAATTGCCATATGCGAACCGTGGGAGAAGGTGTTTTGCAGTAAGTA--------CCCT--CATACT--------A----------A-AA-------AGGTGATAAGCCATTAG-----------------------------------------------------CTAT------TTTTTTACATGTCGTTACTAT-GG-------TGTCTTCACT-----------------------------T---------------TTGTCTTT-----GGCGCACCGATATTGGAATATCTTATCTATGCCGGTCAGTTAGG-C---TTGGC----------ATTAGTCATGG-A-AA-----------------CACGAACAGGCGACCC-------------------------------ACTGCTAAC---TTTAAATTATT-TAAAAATTAAATGAGCA-ACA-TCTCATCACTCCTG---------------------------------------------------------TTT----TCTTTT--TCAGATGTCCTGCTCGGCAGCTGTGTTTCTCTAATCCTATACGCCACCTTTGCC
droBip1 scf7180000396428:84881-85221 + ACTGAACACCCAAATCGCCATATGTGAACCGTGGGAGAAGGTGTTTTGCAGTAAGTA--------CCCC--CATTC--------TC----------G-AG-------AGCTGA-------------------------------------------------------------------TTACCAGTTTTTTACATGTCGTTACTAC-GG-------TGTCTTCACT-----------------------------T---------------TTGTCTTT-----CGCGCACCGATATTGGAGTATCTTATCTATGCCGGTCAGTTCGG-T---TAGGA----------ATTAGTCATGG-A-AA-----------------CACGAACAGGCGACCA-------------------------------ACTGCTAAC---TTTTAATTATT-TTAAAATTAGTTGAACT-AAA-TCCCA----GTACTT-TTTATCT---------------------------------AACTAGTCTCATA-TTCT----TTTTTT--TTAGACGTTCTTCTCGGCAGCTGCGTTTCTCTAATCCTGTACGCCACATTTGCC
dp5 3:5328740-5329110 + GCTTAATACACAGATCGCCATCTGTGAGCCCTGGGAGAAAGTGTTTTGTCGTAAGTACATATA---------------------------------------------------------------------------CCATCCCATCCCACCCCGCAACAGCCCCAGACACATTAGCGATTATCAGTTGTACACTGGGCGT----------T------------CTGTTTCCG-------TG---------TTTTGTAAAGACAATA----ATAGTCTT------TACTCATCGAT--------ATCTTATCTATACCGGTCACT------------------------CTTAGTCACAG-A-ACG-AAC----------C-G--AAACATACGACCT-------------------------------G---A----------------GTGC---------------GCCTGTTCTGCCCATGCT-------GTCTATGGTCTATGCCTATGGTTCTATTATTTCTTAAAACTTCCCTTATTTTTTTACATTTTGTT--TCAGACGTACTCCTTGGCAGCTGTCTGTCCCTCATCCTGTACGCCTCATACGCC
droPer2 scaffold_2:5533935-5534305 + GCTTAATACACAGATCGCCATCTGTGAGCCCTGGGAGAAAGTGTTTTGTCGTAAGTACATATA---------------------------------------------------------------------------CCATCCCATCCCACCCCGCAACAGCCCCAGACACATTAGCGATTATCAGTTGTACACTGGGCGT----------A------------CTGTTTCCA-------TG---------TTTTGTAAAGACAATA----ATAGTCTT------TACTCATCGAT--------ATCTTATCTATACCGGTCACT------------------------CTTAGTCACAG-A-ACG-AAC----------C-G--AAACATACGACCT-------------------------------G---A----------------GTGC---------------GCCTGTTCTGCCCATGCT-------GTCTATGGTCTATGCCTATAGTTCTATTATTTCTTAAAATTTCCACTTTTTTTTCACATTTTGTT--TCAGACGTACTCCTTGGCAGCTGTCTGTCCCTCATCCTGTACGCCTCATACGCC
droWil2 scf2_1100000004513:4758124-4758443 - GTTGAATACACAGATTGCTATTTGTGAGCCATGGGAGAAAGTCTTTTGCCGTAAGTT--------ATAA---GTGACAGTGTTCCC--------------------C--AAGA-------TTAGATT----TAT------ATATGT--------------------------------------------------------ATGTACATA-------TATAAATATA-----------------------------TTTGTGTCTTAC---ATTGTCTA------TACTCATCGAT--------ATCTTATC-ATGCCGGCCATTC------------------------TTAGTCACAGTTAGTCAGA-----------C-GTTGCACC-TTGTCCTTATTCACAGTGAAAATACTGTAAATACACCAAATCATAA-AAAT------TGTAAC---------------G-G--------------AATT--------------------------------------------------------TAT----GTACTT--TCAGATACTCTTTTTGCCAGCTGCCTTTCCCTGCTTCTCTATGCCACATTTGCA
droVir3 scaffold_12875:10513953-10514283 - GCTGAACACACAGATTGCCATCTGCGAGCCATGGGAGAAAGTGTTTTGCCGTAAGTA--------GCCA--AGTGCC--------A----------A-AA-------AGGC----AGCCATTACCCC------------------ATC-----------------------AAGCAGCGATTACAAATCGCCTATCA--------TCC-AG-------T------ATGTGGCCG--------------------------------TCT------CTCTGTGGCACCACCCAACGGT--------ATCTTATCTATTTCGGTCAGTC-TT-C-----G-------------CGCGG-AGGG-A-GAC-AATGACTAACTGTAG--CCAAATGGTGGCCTA------------------------------ATACAAAAA---TAA----TGCTACCATATTAACGTT------------AATGTAATTGTT-------------------------------------------------------TTCA----ATATTT--ACAGACCTACTCATCGGCAGTTGTCTTTCCCTTATACTCTACGCTTCGTACGCG
droMoj3 scaffold_6496:16465681-16466027 + GCTAAACACTCAGATAGCTATTTGCGAGCCATGGGAGAAGGTGTTTTGCCGTAAGTAGTTTTA------------CC-------AT----------G--A-------GTGC----AGCTATT-------------------------------------------------AATCAGCGATTACCAATCATTAACTTGATG-----------------------------GCTGTCATCCATTCCACCAACT-----CTCACTCTCCCT---GTCGCTCTC-ACGGCAGCAAGTTGT--------ATCTTATCTATTTCGGTCAGTA-TT-T------------------GTCCGTCATAG-A-GAC-TATGACTAACTGTTGCGCGAAATGGTGCCAT-------------------------------ATAGGAAAT---TTAT---AGTT-TACTATTTACATT------------AAC---GTAATT-TG-------------------------------------------------TATTATT----ATAATT--GCAGACATACTCCTTGGCAGTTGCATATCTCTTATTCTGTATGCCTCGTATGCG
droGri2 scaffold_15245:3634144-3634199 - GCTCAACACACAGATCTCCATTTGCGAGCCATGGGAGAAAGTGTTTTGTAGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTA--------CTAA---TGGACTGTGCCCTTT-----CCTTCGAA-GGGGCG--AAGA-------TTAGCGC----CGCACCACCATTCGT--------------------------------------------------------ATCTAT-GG-------AGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACCCATCGAT--------ATCTTATCTATGCCGGTCACTC-GG-C-----GGT----------CTTAGTCATGG-A-ACC-TG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCACCATGCTATT----------------------------------------------------------T----TCACTT--TTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
GCTGAACACACAGATCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGAT------TGTT-------------------ATG-TCGCACCATGC.................................................................................................................................2611.00100000000000010000
....................TATGTGAGCCGTGGGAAAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.........ACAGATCGCCATATGTGAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............................................TCAGTGAGTA--------CTAA---TGGACTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
droSec2
ACTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTA--------CTAA---TGGACTGTGCCCTTTCCTTTCCTTCGAAAGG--CG--AAGA-------TTAGCGC----CGCACCACCATTCGT--------------------------------------------------------ATCTAC-GG-------AGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACTCATCGAT--------ATCTTATCTATGCCGGTCACTT-GG-C-----GGT----------CTTAGTCATGG-A-ACC-TG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATA-TCGCACCATGCTATT----------------------------------------------------------T----TCACTT--TTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTCCTCGGCAGCTTCGTCTCC........................2411.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTCCTCGGCAGCTTCGT............................2011.0010010
dm3
ACTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAGTGAGTA--------CTAA---TGGACGGTGCCCTTT-----CCATCGAAAGG--GA--AAGA-------TTAGCGC----CGCGCCACCATTCGT--------------------------------------------------------ATCTAC-GG-------AGTATCAACT-----------------------------TTAGCGCGATAT---ATTGTCTT------TACCCATCGAT--------ATCTTATCTATGCCGGTCACTC-GG-C-----GGT----------CTTAGTCATGG-A-ACC-AG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCAACATGCTATT----------------------------------------------------------T----TCACTT--TTAGATGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
ACTGAACACACAGATCGCCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCCATATGTGAGCCGTGGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................A-ACC-AG----------------------------------------------------------------CTAATGGAT------TGTT-------------------A...............................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTCGTCTCCCTGATCCT................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCATATGTGAGCCGTGGGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CACAGATCGCCATATGTGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000
......................TGTGAGCCGTGGGAAAAGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTCCCTGATCCTCTACGC..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AAAGG--GA--AAGA-------TTAGCGC----CGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TCAGTGAGTA--------CTAA---TGGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTCCTCGGCAGCTTCGTC...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGGCAGCTTCGTCTCCCT......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATGTCCTCCTCGGCAGC.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GATAT---ATTGTCTT------TACCCATC..................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATGTGAGCCGTGGGAAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010
..........................................................................................................................AGCGC----CGCGCCACCATTCGT--------------------------------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CGCCACCATTCGT--------------------------------------------------------ATCTAC-GG-------..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGCCATATGTGAGCCGTGGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCCATATGTGAGCCGTGGGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................TTAGCGC----CGCGCCACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCCATATGTGAGCCGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........CAGATCGCCATATGTGAGCCGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................AAAAGGTCTTCCTCAGTGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AGTATCAACT-----------------------------TTAGCGCGATA............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...GAACACACAGATCGCCATATGTGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTGAGCCGTGGGAAAAGGTCTTCCTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CATGG-A-ACC-AG----------------------------------------------------------------CTAATGGAT------.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................CCTCAGTGAGTA--------CTAA---TGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CATCGAT--------ATCTTATCTATGCC.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGCCGTGGGAAAAGGTCTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............CGCCATATGTGAGCCGTGGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAACACACAGATCGCCATATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATGG-A-ACC-AG----------------------------------------------------------------CTAATGGAT------TG.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-T...........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATCGCCATATGTGAGCCGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AT---ATTGTCTT------TACCCATCGAT--------.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................ACT-----------------------------TTAGCGCGATAT---ATTGTC..................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................AGCGCGATAT---ATTGTCTT------TACC......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GT----------CTTAGTCATGG-A-ACC-AG----------------------------------------------------------------CC....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCCTCCTCGGCAGCTTC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGATCCTCTACGCATCCTT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGAT------TGTT-------------------ATG-TCGCAA......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................GCCATATGTGAGCCGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................GCCATATGTGAGCCGTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................AGCCGTGGGAAAAGGTCTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTCGGCAGCTTCGTCTC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAACACACAGATCGCCATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCCGTGGGAAAAGGTCTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AAGG--GA--AAGA-------TTAGCGC----CGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACTGAACACACAGATCGCCATCTGTGAGCCGTGGGAAAAGGTGTTCCTCCGTAAGTA--------CCTA---TGGACTGTGCCCTT----------GGA-AGG--GG------------------------------ACCATTCGA--------------------------------------------------------GTCTAC-AG-------GGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACGCATCGAT--------ATCTTATCTATGCCGGTCACTC-GG-C-----GGT----------CTTAGTCACGG-A-ACC-TG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCACCATGCTCTT----------------------------------------------------------T----TCACTT--TTAGATGTCCTTCTTGGCAGCTTTGTCTCCCTGATCCTCTACGCATCCTTTGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............GATCGCCATCTGTGAGCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021001000
............GATCGCCATCTGTGAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.............................CGTGGGAAAAGGTGTTCCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
........................TGAGCCGTGGGAAAAGGTGTTCCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
............GATCGCCATCTGTGAGCCGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............GATCGCCATCTGTGAGCCGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.............ATCGCCATCTGTGAGCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
droYak3
GCTGAACACACAGATTGCCATCTGTGAGCCGTGGGAGAAGGTGTTTCTCAGTAAGTA--------CCAT---TGGACTGTGCCCTT----------GGAC-AGGGGG--AAGA-------TTAGGTC----CGC---ACCATTCGT--------------------------------------------------------ATCTAC-AG-------GGTATCAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACCCATCGAT--------ATCTTATCTATGCCGGTCACTTCGG-T-----GGT----------CTTAGTCTCGA-A-ACC-AG----------------------------------------------------------------CTAATGGAT------TGTT-------------------ATG-TCGCACCATGCTATT----------------------------------------------------------T----TCCATT--TTAGATGTCCTTCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............GATTGCCATCTGTGAGCCGTGGGAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000030000
............GATTGCCATCTGTGAGCCGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000030000
...............TGCCATCTGTGAGCCGTGGGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000
............................................TTCTCAGTAAGTA--------CCAT---TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...................ATCTGTGAGCCGTGGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGCAGCTTCGTCTCCCTGAT...................2411.00101000000000
.............ATTGCCATCTGTGAGCCGTGGGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...................................................................AT---TGGACTGTGCCCTT----------GGAC-AGGGGG--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.............ATTGCCATCTGTGAGCCGTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............ATTGCCATCTGTGAGCCGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............GATTGCCATCTGTGAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.......................GTGAGCCGTGGGAGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................GTGAGCCGTGGGAGAAGGTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
ACTGAACACGCAGATCGCCATCTGCGAACCCTGGGAAAAGGTGTTCCTAAGTAAGTA--------CTCCTTACGGCCCGTGCCCTC----------AGA-AAA--TG--AAGA-------TTAGCCC--ATCGC---ACCATACGT--------------------------------------------------------ATCTAC-AA-------AGTATCAGCT-----------------------------TTGGCACGATAT---ATTGTCTT------TACTCATCGAT--------ATCTTATCTATGCCGGTCAGTT----------GGT----------CTTAGTAATGG-A-ACA-GT-----------C-GGCGAACACCCGCCCT-------------------------------G---CTAATGGAT------TGCT-------------------ATG-TCTTACCAAGTTTTT--------------------------------------------------------TTT----TCTTTT--TTAGATGTCCTTCTAGGCAGTTGCGTTTCCCTTATCCTCTACGCATCCTATGCCSizeHit CountTotal NormTotal
No Reads
droBia1
GCTGAACACGCAGATCGCCATCTGTGAGCCCTGGGAAAAGGTGTTCCTGAGTAAGTA--------GTCC--AGGGCTCGAGTCCCC----------GGGA-AG--GG--GAGA-------TTAGGGC-------------GTACAT--------------------------------------------------------ATCTAC-AAATAACAAAGT---AACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TGCTCATCGAT--------ATCTTATCTCGGCCGGTCGGTC-AGTC-----GGT----------CTTAGTCATTAGAAACC-AGT----------C-GACGAACAGCCGACCT-------------------------------G---CTAATGGAT------GGCTAC---------------ACATG-TCTCACCAGGCCTCT--------------------------------------------------------TCC----CCTCTT--CCAGACGTGCTCCTGGGCAGCTTTGTGTCCCTAATCCTCTACGCATCCGTCGCCSizeHit CountTotal NormTotal
No Reads
droTak1
GCTGAACACACAGATCGCCATTTGTGAGCCCTGGGAAAAGGTGTTCTTAAGTAAGTA--------TTTA--AGGGCTTGTGTCCTC----------GG--------GA-GAGA-------TTATCAC----CTAGCC-------------------------------------------------------------------------------------ATAACT-----------------------------TTGGCGCGATAT---ATTGTCTT------TACTCATCGAT--------ATCTTATCTTTGCCGGTCAGTC-GGTC-----GGT----------CTTAGTCATTTCA-ACG-GT-----------C-GGTGAACAGGCGACCA-------------------------------G---CTAATGGAT------TGCTAC---------------ACATG-TCTCACCAGGCTATTTTG-----------------------------------------------------TCT----TTTGTT--TTAGATGTTCTCCTCGGCAGCTGCGTCTCCCTGATCGTCTACGCATCCATCGCCSizeHit CountTotal NormTotal
No Reads
droEle1
GCTGAACACACAGATCGCCATCTGCGAGCCCTGGGAGAAGGTCTTCCTGAGTAAGTA--------CTAA---GGACCCATGCCCTC----------G--------GG--AATA-------TTAGCGC-------A---CCATGCCAT----------------------------------------ACCATTCCAAGACGTATCTAC-AA-------AGTAACAACT--------------------------------------------GCTGTCTT------TACTCATCGAT--------ATCTTATCAACGCCGGTCAGTC-AGTC-----GGTGTCTTAGTGTCTTAGTCATGG-A-GC-----------------GGCGAACACCCGACTT-------------------------------G---CTTATGGAT------TGCGAC---------------G-ATA-TCTCACCAAGTTGTT----------------------------------------------------------T----TCCCTT--TCAGATGTCCTTCTGGGCAGCTGCGTCTCCCTGATCCTGTATGCAACCTTTGCCSizeHit CountTotal NormTotal
No Reads
droRho1
ACTGAACACGCAGATCGCCATCTGTGAGCCCTGGGAGAAGGTGTTCCTCAGTGAGTATATTGGGTATT---GGGGCCCATGCCCGC----------G--------GG--AAGA-------TTAGCGCTCCTCGCACCACT-----------------------------------------------------CGTATCCGTATCTAC-AA-------AGTAACAACT-----------------------------TTGGCGCGATAT--TATTGTCTT------TACTCATCGAT--------ATCTTATCTATGCCGGTCAGTC-GG-T------GT----------CTTAGTCATGG-A-GCG-GCG----------C-GGCGAACACCCGACCT-------------------------------G---CTAATGGAT------AGCG-------------------ATA-ACTGACCAAGTAAAT----------------------------------------------------------T----TCCCTT--TCAGATGTCCTTCTGGGCAGCTGCGTGTCCCTGATCCTGTACGCGACCTTTGCCSizeHit CountTotal NormTotal
No Reads
droFic1
GCTCAACACACAGATCGCCATCTGTGAGCCCTGGGAAAAGGTGTTCCTCAGTAAGTG--------TTCAGCAGGGCCCGTGTCCTC----------G--------CC--AAGA-------TTAGGT-----CGCGCCACTATACGT--------------------------------------------------------ATCTAC-AA-------AGTAACAACT-----------------------------TTGGCGCGGTAT--TATTGTCTT------TGCTCATCGAT--------ATCTTATCTGTGCCGGTCAGTC-G---------GT----------CTTAGTCATGG-A-GC-----------------GGCGAACACCCGACGT-------------------------------G---CTAATGGAT------GGCC-------------------ATG-TCTCATCGAGTAATG-TGTGTCTCCGG---------------------------------------------TC----TCTCTT--TCAGATGTCCTTCTGGGCAGCTTTGTCTCCTTGATCCTCTACGCTTCATTTGCCSizeHit CountTotal NormTotal
No Reads
droKik1
GCTGAACACACAGATCGCCATCTGTGAGCCCTGGGAGAAGGTTTTCCTCAGTGAGTA--------CTTG---TCCAC--------------------------------------------------------------CTACGCATCCCGCAC----ATACCC--------------------------------------ACATAC-AA-------G--------------------------------------TTGTCGCAATTTGTGATTGTCTT------TGCTCATCGAT--------ATCTTATCTGCGCCGGTCGTTC-GTTCGGTCA---GTTTGCGGGTCTTAGTCATAG-G-CGC-AG----------------------------------------------------------------CAAAAGAAT------AACA-------------------GT--------CCTCCCGCT----------------------------------------------------------T----TCTCTTCCACAGACGTCCTGCTCGGATCCTGTATGTCCCTCATCCTGTACGCCTCCTTCGCCSizeHit CountTotal NormTotal
No Reads
droAna3
ACTGAACACCCAAATTGCCATATGCGAACCGTGGGAGAAGGTGTTTTGCAGTAAGTA--------CCCT--CATACT--------A----------A-AA-------AGGTGATAAGCCATTAG-----------------------------------------------------CTAT------TTTTTTACATGTCGTTACTAT-GG-------TGTCTTCACT-----------------------------T---------------TTGTCTTT-----GGCGCACCGATATTGGAATATCTTATCTATGCCGGTCAGTTAGG-C---TTGGC----------ATTAGTCATGG-A-AA-----------------CACGAACAGGCGACCC-------------------------------ACTGCTAAC---TTTAAATTATT-TAAAAATTAAATGAGCA-ACA-TCTCATCACTCCTG---------------------------------------------------------TTT----TCTTTT--TCAGATGTCCTGCTCGGCAGCTGTGTTTCTCTAATCCTATACGCCACCTTTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...GAACACCCAAATTGCCATATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................GCACCGATATTGGAATATC....................................................................................................................................................................................................................................................................................................................1911.001000010
...................ATATGCGAACCGTGGGAGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........AAATTGCCATATGCGAACCGTGGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
ACTGAACACCCAAATCGCCATATGTGAACCGTGGGAGAAGGTGTTTTGCAGTAAGTA--------CCCC--CATTC--------TC----------G-AG-------AGCTGA-------------------------------------------------------------------TTACCAGTTTTTTACATGTCGTTACTAC-GG-------TGTCTTCACT-----------------------------T---------------TTGTCTTT-----CGCGCACCGATATTGGAGTATCTTATCTATGCCGGTCAGTTCGG-T---TAGGA----------ATTAGTCATGG-A-AA-----------------CACGAACAGGCGACCA-------------------------------ACTGCTAAC---TTTTAATTATT-TTAAAATTAGTTGAACT-AAA-TCCCA----GTACTT-TTTATCT---------------------------------AACTAGTCTCATA-TTCT----TTTTTT--TTAGACGTTCTTCTCGGCAGCTGCGTTTCTCTAATCCTGTACGCCACATTTGCCSizeHit CountTotal NormTotal
No Reads
dp5
GCTTAATACACAGATCGCCATCTGTGAGCCCTGGGAGAAAGTGTTTTGTCGTAAGTACATATA---------------------------------------------------------------------------CCATCCCATCCCACCCCGCAACAGCCCCAGACACATTAGCGATTATCAGTTGTACACTGGGCGT----------T------------CTGTTTCCG-------TG---------TTTTGTAAAGACAATA----ATAGTCTT------TACTCATCGAT--------ATCTTATCTATACCGGTCACT------------------------CTTAGTCACAG-A-ACG-AAC----------C-G--AAACATACGACCT-------------------------------G---A----------------GTGC---------------GCCTGTTCTGCCCATGCT-------GTCTATGGTCTATGCCTATGGTTCTATTATTTCTTAAAACTTCCCTTATTTTTTTACATTTTGTT--TCAGACGTACTCCTTGGCAGCTGTCTGTCCCTCATCCTGTACGCCTCATACGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............GATCGCCATCTGTGAGCCCTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
..................CATCTGTGAGCCCTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................CATCTGTGAGCCCTGGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................TCTTATCTATACCGGTCACT------------------------..........................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................GACAATA----ATAGTCTT------TACTCATCGAT--------.......................................................................................................................................................................................................................................................................................................................2611.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCCTCATCCTGTACGCCT........2211.0010100000000
............GATCGCCATCTGTGAGCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCCTTGGCAGCTGTCTGTCCCT......................2611.0010100000000
............GATCGCCATCTGTGAGCCCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............ATCGCCATCTGTGAGCCCTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCCTCATCCTGTACGCC.........2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGTACGCCTCATACGC.2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCCCTCATCCTGTACGCCTC.......2511.0010100000000
................................................................................................................................................CATCCCACCCCGCAACAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GCTTAATACACAGATCGCCATCTGTGAGCCCTGGGAGAAAGTGTTTTGTCGTAAGTACATATA---------------------------------------------------------------------------CCATCCCATCCCACCCCGCAACAGCCCCAGACACATTAGCGATTATCAGTTGTACACTGGGCGT----------A------------CTGTTTCCA-------TG---------TTTTGTAAAGACAATA----ATAGTCTT------TACTCATCGAT--------ATCTTATCTATACCGGTCACT------------------------CTTAGTCACAG-A-ACG-AAC----------C-G--AAACATACGACCT-------------------------------G---A----------------GTGC---------------GCCTGTTCTGCCCATGCT-------GTCTATGGTCTATGCCTATAGTTCTATTATTTCTTAAAATTTCCACTTTTTTTTCACATTTTGTT--TCAGACGTACTCCTTGGCAGCTGTCTGTCCCTCATCCTGTACGCCTCATACGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................ATCTGTGAGCCCTGGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
..............TCGCCATCTGTGAGCCCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
..............................................................................................................................................................................................................................................................................................................................................................CTTAGTCACAG-A-ACG-AAC----------C-G--A.....................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCTGTCCCTCATCCTGTACGCCT........2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCTTGGCAGCTGTCTGT..........................2011.001000001
.......................GTGAGCCCTGGGAGAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droWil2
GTTGAATACACAGATTGCTATTTGTGAGCCATGGGAGAAAGTCTTTTGCCGTAAGTT--------ATAA---GTGACAGTGTTCCC--------------------C--AAGA-------TTAGATT----TAT------ATATGT--------------------------------------------------------ATGTACATA-------TATAAATATA-----------------------------TTTGTGTCTTAC---ATTGTCTA------TACTCATCGAT--------ATCTTATC-ATGCCGGCCATTC------------------------TTAGTCACAGTTAGTCAGA-----------C-GTTGCACC-TTGTCCTTATTCACAGTGAAAATACTGTAAATACACCAAATCATAA-AAAT------TGTAAC---------------G-G--------------AATT--------------------------------------------------------TAT----GTACTT--TCAGATACTCTTTTTGCCAGCTGCCTTTCCCTGCTTCTCTATGCCACATTTGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............GATTGCTATTTGTGAGCCATGGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
............GATTGCTATTTGTGAGCCATGGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...................ATTTGTGAGCCATGGGAGAAAGTCTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
............GATTGCTATTTGTGAGCCATGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.......................GTGAGCCATGGGAGAAAGTCTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............TTGCTATTTGTGAGCCATGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................AGCCATGGGAGAAAGTCTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
................GCTATTTGTGAGCCATGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................GCCATGGGAGAAAGTCTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATACTGTAAATACACCA..........................................................................................................................................................................................2111.00101000
droVir3
GCTGAACACACAGATTGCCATCTGCGAGCCATGGGAGAAAGTGTTTTGCCGTAAGTA--------GCCA--AGTGCC--------A----------A-AA-------AGGC----AGCCATTACCCC------------------ATC-----------------------AAGCAGCGATTACAAATCGCCTATCA--------TCC-AG-------T------ATGTGGCCG--------------------------------TCT------CTCTGTGGCACCACCCAACGGT--------ATCTTATCTATTTCGGTCAGTC-TT-C-----G-------------CGCGG-AGGG-A-GAC-AATGACTAACTGTAG--CCAAATGGTGGCCTA------------------------------ATACAAAAA---TAA----TGCTACCATATTAACGTT------------AATGTAATTGTT-------------------------------------------------------TTCA----ATATTT--ACAGACCTACTCATCGGCAGTTGTCTTTCCCTTATACTCTACGCTTCGTACGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............TGCCATCTGCGAGCCATGGGAGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTTATACTCTACGCTTCGTACGC.2711.001000000000000000000000000000000010000000000000000000000000000000
.............ATTGCCATCTGCGAGCCATGGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCTTTCCCTTATACTCTACGC..........2511.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
GCTAAACACTCAGATAGCTATTTGCGAGCCATGGGAGAAGGTGTTTTGCCGTAAGTAGTTTTA------------CC-------AT----------G--A-------GTGC----AGCTATT-------------------------------------------------AATCAGCGATTACCAATCATTAACTTGATG-----------------------------GCTGTCATCCATTCCACCAACT-----CTCACTCTCCCT---GTCGCTCTC-ACGGCAGCAAGTTGT--------ATCTTATCTATTTCGGTCAGTA-TT-T------------------GTCCGTCATAG-A-GAC-TATGACTAACTGTTGCGCGAAATGGTGCCAT-------------------------------ATAGGAAAT---TTAT---AGTT-TACTATTTACATT------------AAC---GTAATT-TG-------------------------------------------------TATTATT----ATAATT--GCAGACATACTCCTTGGCAGTTGCATATCTCTTATTCTGTATGCCTCGTATGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCCTTGGCAGTTGCAT............................2011.001000001
.......................GCGAGCCATGGGAGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
GCTCAACACACAGATCTCCATTTGCGAGCCATGGGAGAAAGTGTTTTGTAGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....AACACACAGATCTCCATTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/18/2015 at 02:54 PM