ID:dsi_26217 |
Coordinate:3l:11484501-11484650 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_11484651_11485106_-]; five_prime_UTR [3l_11484651_11485106_-]; intron [3l_11483357_11484650_-]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AAACTAGTAACGGGTATAAAAAGCAGCGGAGGTGACACCTCAAAAAGCAAGTAAGTTGGCAATATGCGAATGAGAATCACAAAGCAGAAGTCAAGTCTGCATATTAATGACTATCTCCATTATCATTTGCTTTCTCCCTTCCACCGATATTCGTTGTTTTTAAATTTCATTCTTACGTTCTCCGGAATAAATTGGCATTCAATTGGTTTCATTTATTGTTTATGAATAACACTGTTATTATTATATATTT **************************************************(((((..((......((((((((..........(((((.......)))))....(((((........)))))))))))))......))...((.(((...))).))...............)))))((((....))))............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
M025 embryo |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................CGTTCTCCGGAATTATTGGGC...................................................... | 21 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ....TAGTAACGGGTATAAAAAGCAGCGGA............................................................................................................................................................................................................................ | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...............ATACTAAGCAGCGGAGG.......................................................................................................................................................................................................................... | 17 | 2 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 |
| ........................................................................................................................................................................................................AATTGGTTACAGTTATTGT............................... | 19 | 2 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 |
| ......GTAACGGGTATAAAAA.................................................................................................................................................................................................................................... | 16 | 0 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
TTTGATCATTGCCCATATTTTTCGTCGCCTCCACTGTGGAGTTTTTCGTTCATTCAACCGTTATACGCTTACTCTTAGTGTTTCGTCTTCAGTTCAGACGTATAATTACTGATAGAGGTAATAGTAAACGAAAGAGGGAAGGTGGCTATAAGCAACAAAAATTTAAAGTAAGAATGCAAGAGGCCTTATTTAACCGTAAGTTAACCAAAGTAAATAACAAATACTTATTGTGACAATAATAATATATAAA
**************************************************(((((..((......((((((((..........(((((.......)))))....(((((........)))))))))))))......))...((.(((...))).))...............)))))((((....))))............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
GSM343915 embryo |
M024 male body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TAGTAATCGAAAGAGAGAAGGT........................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................TTCCGTCCATTCAAACGTTAT.......................................................................................................................................................................................... | 21 | 3 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 |
| ..................................................................................................................................................................TTACAGTAAGACTGCAAGT..................................................................... | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| .............................................................................................................................AAACGAATGAAGGAACGTGG......................................................................................................... | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:21 AM