ID:

dsi_26146

 Coordinate:

4:273883-274032 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.9 -27.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
PROTOP_BDNAP+
mature
  1. 2l:20653-20676 +
  2. 2r:70124-70147 +
  3. 2r:800149-800172 -
  4. 2r:818882-818905 +
  5. 2r:1453944-1453967 -
  6. 2r:1861591-1861614 +
  7. 2r:2175917-2175940 -
  8. 2r:3162509-3162532 +
  9. 3l:22871733-22871756 +
  10. 3l:22928570-22928593 +
  11. 3l:22988598-22988621 +
  12. 3r:6577074-6577097 +
  13. x:868465-868488 +
  14. node_92658:115-138 +
  15. node_20027:829-852 -
  16. node_95717:2109-2132 -
  17. node_55970:100-123 -
  18. node_50966:4983-5006 -
  19. node_20292:447-470 -
  20. node_110930:326-349 +
  21. 2l:23111489-23111512 -
  22. 2l:23176655-23176678 -
  23. 2r:881011-881034 -
  24. 3l:23173822-23173845 -
  25. dsi_26146  4:274005-274028 -
  26. x:19555321-19555344 -
star

Sense Strand Reads

TCTAGAGCCACGCCGAAAAAATCGTGTGCCAAAAAATTGTATGGCGTTACGCATCTTGTTATTCTAGTGTCTTTGGTCAAACGTCATTGTGGTCCTGTGGGTATACAACAGTGTTTGTAAAGGTAATTCGACCGTACCCAGTCTGAAGTTCGGGGCCGTGTCGAGGAAAGAAGTATTACAGAGTGTTTCTCTTTCCACAGAGCAACGTAACAATTTCCACAATTAAGAAGCATTCAATGGAAGAAGTTCT
******************************************************....((.........(((((((.((..........(((((((((((((((((((......))))...............)))))))..........)))))))))))))))))))********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 M053
female body
 M025
embryo
 M023
head
 O002
Head
......................................GTATGGCGTTACGCATCT.................................................................................................................................................................................................. 18 0 20 13.80 276 0 0 0 0 276 0 0 0 0 0 0 0 0
..........................................................................................................AACACTGATTGTAAAGGT.............................................................................................................................. 18 2 7 5.14 36 1 0 0 0 0 0 0 0 27 2 2 4 0
......................................................CTTGTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 24 0 20 5.05 101 34 0 27 1 0 0 0 36 0 3 0 0 0
...............................................................................................................................................TGAAGTTCGGGGCCGTGTCGAGGAAA................................................................................. 26 0 1 4.00 4 1 2 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TAAGAAGCATTCAATGGAAGAAGT... 24 0 1 4.00 4 2 1 0 0 0 1 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCAA.......................................................................................................................................................................... 26 0 6 3.83 23 2 1 4 0 5 0 0 11 0 0 0 0 0
..............................................................................AAACGTCATTGTGGTCCTGTGGGTA................................................................................................................................................... 25 0 1 3.00 3 0 0 0 1 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................TCGGGGCCGTGTCGAGGAAAGAAGTAT.......................................................................... 27 0 1 3.00 3 0 0 2 0 0 0 0 1 0 0 0 0 0
....................................................................................CATTGTGGTCCTGTGGGTATACAAC............................................................................................................................................. 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
............................................................................TCAAACGTCATTGTGGTCCTGTGGGTA................................................................................................................................................... 27 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................TGTGGTCCTGTGGGTATACAACAGTGT........................................................................................................................................ 27 0 1 3.00 3 0 0 2 0 0 0 1 0 0 0 0 0 0
.......................................................................................TGTGGTCCTGTGGGTATACAACAGTG......................................................................................................................................... 26 0 1 3.00 3 0 0 1 0 0 2 0 0 0 0 0 0 0
.............................................................................CAAACGTCATTGTGGTCCTGTGGGTA................................................................................................................................................... 26 0 1 3.00 3 0 1 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TGTGGTCCTGTGGGTATACAACAGTGTT....................................................................................................................................... 28 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCGGGGCCGTGTCGAGGAAAGAAGT............................................................................ 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................GTAAAGGTAATTCGACCGTA.................................................................................................................. 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCAGTCTGAAGTTCGGGGCCGTGTC........................................................................................ 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................TTGTGGTCCTGTGGGTATACAACAGTG......................................................................................................................................... 27 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACAGAGTGTTTCTCTTTCCACAGA................................................. 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................TTCGACCGTACCCAGTCTGAAGTTCGG................................................................................................. 27 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................TCTGAAGTTCGGGGCCGTGTCGAGGAA.................................................................................. 27 0 1 2.00 2 0 0 0 0 0 1 0 1 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCA........................................................................................................................................................................... 25 0 14 1.71 24 2 0 11 0 0 0 0 11 0 0 0 0 0
...................................................CATCTTGTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 27 0 20 1.50 30 2 1 1 3 0 3 0 0 1 1 18 0 0
..TAGAGCCACGCCGAAAAA...................................................................................................................................................................................................................................... 18 0 20 1.30 26 0 0 0 0 26 0 0 0 0 0 0 0 0
..............................................................................................................................................CTGAAGTTCGGGGCCGTGTCGAGGAAA................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................TCAAACGTCATTGTGGTCCTGTGG...................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTCCACAATTAAGAAGCATTCAATGGA......... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................TTGTGGTCCTGTGGGTATACAAC............................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TCCACAGAGCAACGTAACAATTTC................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TTACAGAGTGTTTCTCTTTCCAC.................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TATTACAGAGTGTTTCTCTTTCCACAGA................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGAAAGGGAATTCGACCGTA.................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TACCCAGTCTGAAGTTCGGGGCCGTGT......................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAACGTAACAATTTCCACAATTAAGA...................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................TTCCACAGAGCAACGTAACAATTT.................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TCTGAAGTTCGGGGCCGTGTCGAGGA................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TGGACCTGTGGGTATACAACAGTGTT....................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TGTTATTCTAGTGTCTTTGGTCAAACGTCA.................................................................................................................................................................... 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................CTAGTGTCTTTGGTCAAACGT...................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................GTTTCTCTTTCCACAGAGCAACG........................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................CAGTGTTTGTAAAGGTAATT.......................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................CAAACGTCATTGTGGTCCTGG........................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................TATTCTAGTGTCTTTGGTCAAACGTCATT.................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGTAAAGGTAATTCGACCGTACCCA.............................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................TCAAACGTCATTGTGGTC............................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTGTAAAGGTAATTCGACCGTACCCA.............................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................CAGTCTGAAGTTCGGG................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................TTGTGGTCCTGTGGGTATACAACAG........................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCGAGGAAAGAAGTATTACAGAGTG................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GTCATTGTGGTCCTGTGGG..................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TAATTCGACCGTACCCAGTCTGAAGT..................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCGAGGAAAGAAGTATTACAGAGTGTT............................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CCTGTGGGTATACAACAGTGTTTGT.................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CAAACGTCATTGTGGTCCTGTGGGTATA................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATTCTAGTGTCTTTGGTCAAACG....................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................ATTGTGGTCCTGTGGGTATACAAC............................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCCACAATTAAGAAGCATTCAATGG.......... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TTACAGAGTGTTTCTCTTTCCACAGA................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTAAGAAGCATTCAATGGAAGAAGT... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGTGGTCCTGTGGGTATACAACA............................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGAAGTTCGGGGCCGTGTCGAGGA................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GTTCGGGGCCGTGTCGAGGAA.................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTAAGAAGCATTCAATGGAAGAAGTT.. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGAAGTTCGGGGCCGTGTCGAGGAA.................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TTACAGAGTGTTTCTCTTTCCA..................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TCCTGTGGGTATACAACAGTGTTTGT.................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................CACAGAGCAACGTAACAATTTCCACA............................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TCTGAAGTTCGGGGCCGTGTCGAGG.................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCGGGGCCGTGTCGAGGAAAGAAGTA........................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TCGGGGCCGTGTCGAGGAAAGAAGTA........................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................TTCTAGTGTCTTTGGTCAAACGTCAT................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................TGGTCCTGTGGGTATACAACAGTGTT....................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAAGAAGTATTACAGAGTGTT............................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATTAAGAAGCATTCAATGGAAGAAGT... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................TCCACAGAGCAACGTAACAATTT.................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GGTAATTCGACCGTAC................................................................................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGTGGTCCTGTGGGTATACAACAA........................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCTTTCCACAGAGCAACGTAACCA..................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................TCAAACGTCATTGTGGTCCTGTGGG..................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TAAGAAGCATTCAATGGAAGAAGTT.. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................AGGAAAGAAGTATTACAGAGTGTTTC............................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTCCACAATTAAGAAGCATTCAATGGAA........ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TATACAACAGTGTTTGTA................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACAGAGTGTTTCTCTTTCCACAGAGCA.............................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TGTTTGTAAAGGTAATTCGACCGTA.................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGTCTGAAGTTCGGGGCCGTGTCGA...................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................ATTGTGGTCCTGTGGGTATACA............................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................TCCACAATTAAGAAGCATTCAATGGA......... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................GCCGTGTCGAGGAAAGAAGTATTACA...................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCTTTCCACAGAGCAACGTAACAAT.................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................TGTGCCAAAAAATTGTATGGCGTTACGCA..................................................................................................................................................................................................... 29 0 3 0.67 2 0 0 0 0 0 1 1 0 0 0 0 0 0
........................TGTGCCAAAAAATTGTATGGCGTT.......................................................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................TCGTGTGCCAAAAAATTGTATGGCG............................................................................................................................................................................................................ 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................TCGTGTGCCAAAAAATTGTATGGCGT........................................................................................................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GCATCTTGTTATTCTAGTGTCTTTGGT............................................................................................................................................................................. 27 0 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CAACAGTGTTTGTAAA................................................................................................................................. 16 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TGTTATTCTAGTGTCTTTGGTTAAACG....................................................................................................................................................................... 27 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................TTGTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 23 0 20 0.45 9 7 0 0 0 0 0 0 0 0 1 1 0 0
..............GAAAAAATCGTGTGCAAAAAAATTGTA................................................................................................................................................................................................................. 27 1 5 0.40 2 0 1 0 0 0 0 1 0 0 0 0 0 0
.................AAAATCGTGTGCCAAAAAATTGTG................................................................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTGCCAAAAAATTGTATGGCGTTACGA...................................................................................................................................................................................................... 28 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................TGTGCCAAAAAATTGTATGGCGTTAC........................................................................................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................GTCTGAAGATCGGGG............................................................................................... 15 1 6 0.33 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...................................................CATCTTGTTATTCTAGTGTCTTTGGTCA........................................................................................................................................................................... 28 0 11 0.27 3 0 2 0 1 0 0 0 0 0 0 0 0 0
.........................................................GTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 21 0 20 0.25 5 3 0 0 0 0 0 1 0 0 0 0 1 0
........................................................................................................ATAACACTGATTGTAAAGGT.............................................................................................................................. 20 3 14 0.21 3 0 0 0 0 0 1 0 0 2 0 0 0 0
......................................................CTTTTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 24 1 20 0.20 4 0 0 0 0 0 0 0 0 1 0 3 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCAATC........................................................................................................................................................................ 28 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCAAA......................................................................................................................................................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GCATCTTGTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 28 0 20 0.20 4 1 0 0 0 0 0 0 0 0 0 3 0 0
.........................................................GTTATTCTAGTGTCTTTGGT............................................................................................................................................................................. 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.........ACGCCGAAAAAATCGTGTGCCAAAAAA...................................................................................................................................................................................................................... 27 0 11 0.18 2 1 1 0 0 0 0 0 0 0 0 0 0 0
TCTAGAGCCACGCCGAAAAAATCGTG................................................................................................................................................................................................................................ 26 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ATCCTGTCTGAAGATCGGGG............................................................................................... 20 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCAAAA........................................................................................................................................................................ 28 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTGTTATTCTAGTGTCTTTGGTCAA.......................................................................................................................................................................... 25 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................AGAAGCATTGAATCGAAG....... 18 2 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCAACT........................................................................................................................................................................ 28 2 18 0.11 2 0 0 0 0 0 0 0 2 0 0 0 0 0
................AAAAATCGTGTGCAAAAAAATTGTA................................................................................................................................................................................................................. 25 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTTGTGTTTTTGGTC............................................................................................................................................................................ 24 2 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0 0
..........................................................TTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 20 0 20 0.10 2 0 0 0 0 0 0 0 0 1 0 1 0 0
......................................GTATGGCGTTACGCATCTTAT............................................................................................................................................................................................... 21 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...................................................CATCTTGTTATTCTAGTGTCTTTGCTCA........................................................................................................................................................................... 28 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................ATCTTGTTATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTGCCAAAAAATTGTATGGCGTTACGA...................................................................................................................................................................................................... 27 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCTA.......................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................TGCCAAAAAATTGTATGGCGTTACGCT..................................................................................................................................................................................................... 27 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..TAGAGCCACTTCGAAAAAATCGTCTGC............................................................................................................................................................................................................................. 27 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGG.............................................................................................................................................................................. 22 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0
...........................GCCAAAAAATTGTATGGCGTT.......................................................................................................................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTCAACA........................................................................................................................................................................ 28 2 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0
TCTAGAGCCACGCCGAAAAAATCGT................................................................................................................................................................................................................................. 25 0 14 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................TCTTATTATTCTAGTGTCTTTGGTCA........................................................................................................................................................................... 26 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..TAGAGCCACGCCGAAAAAATCGTG................................................................................................................................................................................................................................ 24 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GGTCCTGTGGGGATA................................................................................................................................................. 15 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..TAGAGCCACGCCGAAAAAATAGTGTG.............................................................................................................................................................................................................................. 26 1 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..TAGAGCCACGCCGAAAAAATCG.................................................................................................................................................................................................................................. 22 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTTTTTGCTCAA.......................................................................................................................................................................... 26 2 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..TAGAGCCACGCCGAAAAAATAGTG................................................................................................................................................................................................................................ 24 1 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................CATCTTCTTATTCTAGTGTCTTTGGT............................................................................................................................................................................. 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..TAGAGCCACGCCGAAAAAATAGTGA............................................................................................................................................................................................................................... 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTC................................................................................................................................................................................... 17 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTGGTTAAAC........................................................................................................................................................................ 28 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTGTTATTCTAGTGTCTTTGGTCA........................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
TCTAGAGCCACGCCGAAAAAA..................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..TAGAGCCACGCCGAAAAAA..................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................CATCTTGTTATTCTAGTGTCG.................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................TATTCTAGTGTCTTTGGTCA........................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................CTTGTAATTCTAGTGTCTTTGGT............................................................................................................................................................................. 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............GAAAAAATCGTGTGCCAAAAAATGGTA................................................................................................................................................................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............CGAAAAAATCGTGTGCCAAAAAA...................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................GTTACGCATCTTGTTATTCTA........................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................ATTCTAGTGTCTTTGGTC............................................................................................................................................................................ 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................TGTATGGCGTTACGCATCTTGGTA............................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..TAGAGCCACGCCTAGA........................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCG.................................................................................................................................................................................. 18 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................CATCTTGTTATTCTAGGGTCTTTGGTC............................................................................................................................................................................ 27 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................GTCTGAAGATCGGGGG.............................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................CTTGTTATTCTAGTGTCTTTG............................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AGATCTCGGTGCGGCTTTTTTAGCACACGGTTTTTTAACATACCGCAATGCGTAGAACAATAAGATCACAGAAACCAGTTTGCAGTAACACCAGGACACCCATATGTTGTCACAAACATTTCCATTAAGCTGGCATGGGTCAGACTTCAAGCCCCGGCACAGCTCCTTTCTTCATAATGTCTCACAAAGAGAAAGGTGTCTCGTTGCATTGTTAAAGGTGTTAATTCTTCGTAAGTTACCTTCTTCAAGA
*********************************************************************************....((.........(((((((.((..........(((((((((((((((((((......))))...............)))))))..........)))))))))))))))))))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 M053
female body
 M024
male body		 M025
embryo
 GSM343915
embryo
.......................................ATACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 25 0 20 26.50 530 471 12 0 0 0 0 13 0 34 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 26 0 10 21.00 210 184 0 24 0 0 0 1 0 0 0 1 0 0 0
...........................................CGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 21 0 20 9.65 193 3 0 0 190 0 0 0 0 0 0 0 0 0 0
...................................TAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 25 0 10 6.90 69 56 0 12 0 0 0 0 0 0 0 1 0 0 0
....................................AACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 24 0 20 6.30 126 0 0 125 0 0 0 0 0 0 0 1 0 0 0
....................................AACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 25 0 20 6.10 122 2 0 48 72 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CGTTGCATTGTTAAAGGTGTTAATTCTT..................... 28 0 1 5.00 5 0 3 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................TTGCAGTAACACCAGGACACCCATATGT............................................................................................................................................... 28 0 1 5.00 5 0 0 0 0 0 3 2 0 0 0 0 0 0 0
.........................................ACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 20 0 20 4.95 99 1 0 0 98 0 0 0 0 0 0 0 0 0 0
..........................................CCGCAATGCGTAGAACAATAAGA......................................................................................................................................................................................... 23 0 20 4.50 90 0 0 90 0 0 0 0 0 0 0 0 0 0 0
.......................................ATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 21 0 20 4.30 86 84 0 0 0 0 0 0 2 0 0 0 0 0 0
..........................................CCGCAATGCGTAGAACAATAAGATC....................................................................................................................................................................................... 25 0 20 4.10 82 0 0 82 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGCAGTAACACCAGGACACCCATATGT............................................................................................................................................... 27 0 1 4.00 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0
..........GCGGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 26 0 11 3.73 41 1 9 0 0 11 0 0 6 10 0 2 0 2 0
............................................................................................................................................................................................GAGAAAGGTGTCTCGTTGCATTGT...................................... 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 25 0 11 3.00 33 0 7 0 0 21 1 0 2 1 0 1 0 0 0
..............................................................................................................................................................................TAATGTCTCACAAAGAGAAAGGTGTCT................................................. 27 0 1 3.00 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AATGTCTCACAAAGAGAAAGGTGTCTCGT.............................................. 29 0 1 3.00 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0
...................................TAACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 26 0 9 2.33 21 15 3 0 0 1 0 0 0 2 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 27 0 9 2.00 18 11 2 0 0 2 0 0 1 2 0 0 0 0 0
..........................................................................................................................................................CGGCACAGCTCCTTTCTTCATAATGTCT.................................................................... 28 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................CAGTTTGCAGTAACACCAGGACACCCAT................................................................................................................................................... 28 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................CGTTGCATTGTTAAAGGTGTTAAT......................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGAGAAAGGTGTCTCGTTGCATTGT...................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTCCATTAAGCTGGCATGGGTCAGACT........................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCCGGCACAGCTCCTTTCTTCATAATGTCT.................................................................... 30 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AATGTCTCACAAAGAGAAAGGTGTCT................................................. 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........GCGGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 25 0 11 1.82 20 2 4 0 0 6 1 0 5 2 0 0 0 0 0
.....................................ACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 23 0 20 1.80 36 11 0 25 0 0 0 0 0 0 0 0 0 0 0
.....................................ACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 24 0 20 1.60 32 7 0 0 24 0 0 0 0 0 0 1 0 0 0
........................................TACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 24 0 20 1.20 24 0 0 0 0 0 0 17 0 0 0 0 0 0 7
..........GCGGCTTTTTTAGCACACGGTTTT........................................................................................................................................................................................................................ 24 0 15 1.07 16 2 3 0 0 0 1 0 3 6 0 0 0 0 1
...........................................................ATAAGATCACAGAAACCAGT........................................................................................................................................................................... 20 0 20 1.05 21 0 0 21 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GGGTGTCTCGTTGCATTGTTA.................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................TTGTTAAAGGTGTTAATTCTT..................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGGTGTCTCGTTGCATTGT...................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................CTCGTTGCATTGGTAAGGGTGTTAATT........................ 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAGAGAAAGGTGTCTCGTTGCATT........................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TAATGTCTCACAAAGAGAAAGGTGTC.................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AACATAATGTCTCACAAAGAGAAAGGTGT................................................... 29 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGAGAAAGGTGTCTCGTTGCATTGTT..................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................AGAAACCAGTTTGCAGTA................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGAAAGGTGTCTCGTTGCATTGTTAAAG................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................CAGACTTCAAGCCCCGGCACAGCTCCT................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTTGCATTGTTAAAGGTGTTAATT........................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATAATGTCTCACAAAGAGAAAGGTGT................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................TCACAAACATTTCCATTAAGCT....................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TAAAGGTGTTAATTCTTCGTAAGT.............. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CCTTTCTTCATAATGTCTCACAA............................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................AAGAGAAAGGTGTCTCGTTGCATTGTT..................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TAATGTCTCACAAAGAGAAAGGTGT................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CGTTGCATTGTTAAAGGTGTTAATTCT...................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................AGAAACCAGTTTGCAGTAACACCAGGA.......................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ACCAGTTTGCAGTAACACCAGGACACCC..................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CATAATGTCTCACAAAGAGAAAGGTGT................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAGAGAAAGGTGTCTCGTTGCATTGT...................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAGAGAAAGGTGTCTCGTTGCATTGTT..................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAGAGAAAGGTGTCTCGTTGCATTGT...................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTTGCATTGTTAAAGGTGTTAATTCTT..................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCACAGAAACCAGTTTGCAGT.................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................ATAATGTCTCACAAAGAGAAAGGTGTCT................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CGTTGCATTGTTAAAGGTGTTA........................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAA................................................................................................................................................................................................. 23 0 10 1.00 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GAGAAAGGTGTCTCGTTGCAT......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTTAGCACACGGTTTTTTAA.................................................................................................................................................................................................................... 27 0 3 1.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................TTGCAGTAACACCAGGACACCCAT................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................CCGGCACAGCTCCTTTCTTC............................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TAAAGGTGTTAATTCTTCGTAAGTTA............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................AGGACACCCATATGTTGTCACAAACATT.................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGGCACAGCTTTTTTCTTCATAATGT...................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GAGAAAGGTGTCTCGTTGCATTGTT..................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................AGATCACAGAAACCAGTTTGCAGT.................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CTCGTTGCATTGTTAAAGGTGTTAAT......................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAGAGAAAGGTGTCTC................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATCACAGAAACCAGTTTGCAGTAACACCA............................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTGGTAAAGGTGTTAATTCTTCGT.................. 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................AGGACACCCATATGTTGTCACAAACAT................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAAGCTGGCATGGGTCAGACTTCAAG................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................CCCATATGTTGTCACAAAC..................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................TTCCATTAAGCTGGCATGGGTCAGACTT....................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACAGCTCCTTTCTTCATAATGTCTCAC................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAGAGAAAGGTGTCTCGTTGCATT........................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GTCTCACAAAGAGAAAGGTGT................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTAAAGGTGTTAATTCTTCGTAAGT.............. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................TAAGATCACAGAAACCAGTTT......................................................................................................................................................................... 21 0 9 1.00 9 1 0 0 7 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................GTCTCACAAAGAGAAAGGTGTCTCGT.............................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TCATAATGTCTCACAAAGAGAAAGGT..................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CACAAAGAGAAAGGTGTCTCGTTGCAT......................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTAAAGGTGTTAATTCTTCGTAAGT.............. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 24 0 11 0.91 10 0 2 0 0 4 0 0 4 0 0 0 0 0 0
......................................CATACCGCAATGAGTAGAATA............................................................................................................................................................................................... 21 2 20 0.90 18 0 0 18 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 26 1 20 0.90 18 0 0 0 0 8 1 0 2 7 0 0 0 0 0
.........TGCGGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 26 0 11 0.82 9 2 0 0 0 1 0 0 3 1 0 2 0 0 0
.......................................ATACCGCAATGCGTAGAACAATAAGA......................................................................................................................................................................................... 26 0 20 0.80 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TGCGGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 27 0 11 0.73 8 0 2 0 0 2 0 0 2 1 0 1 0 0 0
.....................................ACATACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 27 0 20 0.70 14 10 0 0 0 0 0 0 0 0 0 4 0 0 0
........................................................ACAATAAGATCACAGAAACCAGTTT......................................................................................................................................................................... 25 0 6 0.67 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0
.........................................ACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 23 0 20 0.65 13 0 1 0 0 0 7 0 5 0 0 0 0 0 0
...........CGGCTTTTTTAGCACACGGTTTT........................................................................................................................................................................................................................ 23 0 15 0.60 9 0 3 0 0 4 0 0 1 1 0 0 0 0 0
........................................TACCGCAATGCGTAGAACAATAAGA......................................................................................................................................................................................... 25 0 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GAACAATAAGATCACAGAAACCAGTTT......................................................................................................................................................................... 27 0 5 0.60 3 0 0 0 0 0 0 0 0 0 0 0 0 3 0
..................................................................................................................................TGGCATGTGTCAGACGTCA..................................................................................................... 19 2 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
.....................................................AGAACAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 26 0 14 0.50 7 0 1 0 0 0 4 2 0 0 0 0 0 0 0
...................TTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 17 0 20 0.50 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 27 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
......CGGTGCGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 26 0 17 0.47 8 4 0 0 0 0 0 0 0 0 0 3 0 0 1
.........TGCGGCTTTTTTAGCACACGGTTTT........................................................................................................................................................................................................................ 25 0 15 0.47 7 0 0 0 0 1 0 0 1 3 0 2 0 0 0
....CTCGGTGCGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 28 0 15 0.40 6 3 0 0 0 0 0 0 2 0 0 1 0 0 0
.....................................................AGAACAATAAGATCACAGAAACCAGTTT......................................................................................................................................................................... 28 0 5 0.40 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0
.....TCGGTGCGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 27 0 16 0.38 6 2 0 0 0 0 2 0 2 0 0 0 0 0 0
..............................................AATGCGTAGAACAATAAGATCACAGAAA................................................................................................................................................................................ 28 0 20 0.35 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0
................................................................................................................................................................TGCTCCTTTCTTCATT.......................................................................... 16 2 20 0.35 7 0 4 0 0 0 0 0 3 0 0 0 0 0 0
...............TTTTTTAGCACACGGTTTTTTAAC................................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................TTAGCACACGGTTTTTTAA.................................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TAACATACCGCAATGCGTAGAACGA.............................................................................................................................................................................................. 25 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGCGTAGAACAATAAGATCACAGAAA................................................................................................................................................................................ 26 0 20 0.30 6 4 0 0 0 0 0 2 0 0 0 0 0 0 0
.......GGTGCGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 25 0 17 0.29 5 2 0 0 0 0 0 0 1 1 0 1 0 0 0
................................................TGCGTAGAACAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 31 0 11 0.27 3 0 2 0 0 0 0 0 1 0 0 0 0 0 0
.......GGTGCGGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 28 0 11 0.27 3 0 0 0 0 1 0 0 0 0 0 2 0 0 0
.......................................ATGCCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 25 1 20 0.25 5 0 0 0 0 0 0 0 3 2 0 0 0 0 0
..................................TTAACATACCGCAATGCGTA.................................................................................................................................................................................................... 20 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................AACATACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 28 0 20 0.20 4 2 1 0 0 0 0 0 0 0 0 1 0 0 0
...........CGGCTTTTTTAGCACACGGTTTTTTA..................................................................................................................................................................................................................... 26 0 10 0.20 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.........TGCAGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 27 1 20 0.20 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0
.........TGCAGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 26 1 20 0.20 4 0 1 0 0 0 0 0 3 0 0 0 0 0 0
.......................................ATACCGCATTGCGTAGAACAATAAG.......................................................................................................................................................................................... 25 1 20 0.20 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0
...................................TAACATACCGCAATGCGTAGAA................................................................................................................................................................................................. 22 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......CGGTGCGGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 27 0 15 0.20 3 0 0 0 0 0 0 0 1 0 0 2 0 0 0
........................................TACCGCAATGCGTAGAACAATA............................................................................................................................................................................................ 22 0 20 0.20 4 3 0 0 0 0 0 1 0 0 0 0 0 0 0
.........TGCGGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 24 0 16 0.19 3 0 0 0 0 0 0 0 2 1 0 0 0 0 0
..................................................CGTAGAACAATAAGATCACAGAAAACAGT........................................................................................................................................................................... 29 1 11 0.18 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
..................................................CGTAGAACAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 29 0 11 0.18 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................AATAAGATCACAGAAACCAGTTT......................................................................................................................................................................... 23 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................AGAACAATAAGATCACAGAAACCAGTT.......................................................................................................................................................................... 27 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CAATAAGATCACAGAAACCAGTTT......................................................................................................................................................................... 24 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........GCAGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 26 1 20 0.15 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0
.......................................ATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 22 0 20 0.15 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0
................................................TGCGTAGAACAATAAGATCACAGAAAC............................................................................................................................................................................... 27 0 20 0.15 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0
..........GCGGCTTTTTTAGCACA............................................................................................................................................................................................................................... 17 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CATACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 26 0 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
.............................................CAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 19 0 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
...........................................CGCAATGCGTAGAACAAT............................................................................................................................................................................................. 18 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TCAACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 27 1 20 0.15 3 1 0 0 0 1 0 0 1 0 0 0 0 0 0
................................................TGCGTAGAACAATAAGATCACAGAA................................................................................................................................................................................. 25 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0
...................................TAACATACCGCAATGCGT..................................................................................................................................................................................................... 18 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GGTGCGGCTTTTTTAGCACACGGTTTT........................................................................................................................................................................................................................ 27 0 14 0.14 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................AGAACAATAAGATCACAGAAAACAGTT.......................................................................................................................................................................... 27 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................AGAACAATAAGATCACAGAAAACAGT........................................................................................................................................................................... 26 1 15 0.13 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0
.......GGTGCGGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 26 0 15 0.13 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0
.....TCGGTGCGGCTTTTTTAGCACACGGT........................................................................................................................................................................................................................... 26 0 16 0.13 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0
...................................TAACATACCGCTATGCGTAGAAGAA.............................................................................................................................................................................................. 25 2 16 0.13 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................AAGGTGTCTCGTAGC........................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......GGGTGCGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 26 1 17 0.12 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.......GGTGCGGCTTTTTTAGCACACGGT........................................................................................................................................................................................................................... 24 0 17 0.12 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 22 0 18 0.11 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0
...................................TAACATGCCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 26 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AAGATCACAGAAACCAGTTT......................................................................................................................................................................... 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCGGTTTTTTTAGCAC................................................................................................................................................................................................................................ 26 1 18 0.11 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGGACAAT............................................................................................................................................................................................. 27 1 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................TAACATACCGCAATGCGTAGAACAATA............................................................................................................................................................................................ 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TCACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 26 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTAACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 28 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCGGCTTTTTTATCA................................................................................................................................................................................................................................. 25 1 19 0.11 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................ACCGCAATGCGTAGAATAATAAG.......................................................................................................................................................................................... 23 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAAC................................................................................................................................................................................................ 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CATACCGCAATGAGTAGAAT................................................................................................................................................................................................ 20 2 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
.......................................ATACCGCAATGCGTAGAATAA.............................................................................................................................................................................................. 21 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
......CGGTGCAGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 27 1 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
............................................................TAAGATCACAGAAACCAGT........................................................................................................................................................................... 19 0 20 0.10 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................ACCGCAATGCGTAGAATAATAAGA......................................................................................................................................................................................... 24 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
...............TTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CAATGCGTAGAACAATAAGAT........................................................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCGGCTTTTTTCGCACACGGTTTTTTA..................................................................................................................................................................................................................... 27 1 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................TTTTAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 28 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................CGTAGAACAATAAGATCACAGAAACC.............................................................................................................................................................................. 26 0 20 0.10 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................AATGCGTAGAACAATAAG.......................................................................................................................................................................................... 18 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.................TTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TAACATACCGCAATGCGTAGA.................................................................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCGTAGAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 30 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
......CGGTGCGGCTTTTTTAGCA................................................................................................................................................................................................................................. 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTCGGTGCGGCTTTTTTAGCA................................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................ATAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCGGCTTT........................................................................................................................................................................................................................................ 18 0 20 0.10 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................CTAACATACCGCAATGTGTAGAACAA.............................................................................................................................................................................................. 26 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................ATACCGCAATGCGTAGAATAATAAG.......................................................................................................................................................................................... 25 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
......................................CATACCGCAATGCGTAGAATAATAAG.......................................................................................................................................................................................... 26 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................ACGGTTTTTTAACATACCGCAATGCGT..................................................................................................................................................................................................... 27 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
........GTGCAGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 25 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................TACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 24 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CCTCACGCCCCGGCCCAGC....................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
............................................................AAAGATCACAGAAACCAGTT.......................................................................................................................................................................... 20 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........GCGGCTTTTTTAGCACACGGTTTTTTA..................................................................................................................................................................................................................... 27 0 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................CATACCGCAATGAGTAGAATAATAAGA......................................................................................................................................................................................... 27 2 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAACA............................................................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCGTAGAACAATAAGATCACAGAAA................................................................................................................................................................................ 25 0 20 0.10 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAACCA.............................................................................................................................................................................................. 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTAGAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 28 1 20 0.10 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
........GTGCGGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 27 0 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......CGGTGCGGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 29 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCGGCATTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 26 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........AGCGGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 27 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........GCGGCTTTTTTAGCACACGGTCTTTT...................................................................................................................................................................................................................... 26 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTAGAACAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 28 0 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGTAGAACAG.............................................................................................................................................................................................. 26 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCGGCTTTTTTAGCAC................................................................................................................................................................................................................................ 26 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............GGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 24 0 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................TTACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 25 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTAAGCACACGGTTTTTT...................................................................................................................................................................................................................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........GCGGCTTTTTTAGCACACAGTTTTTT...................................................................................................................................................................................................................... 26 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCGGCTTTTTTAGCACAC.............................................................................................................................................................................................................................. 28 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGCAGAA................................................................................................................................................................................................. 23 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGCTTTTTAAGCACACGGTTTTT....................................................................................................................................................................................................................... 24 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GTGTTAACTCTTCGT.................. 15 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........GCGGCTTTTTAAGCACACGGTTTTT....................................................................................................................................................................................................................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GAAACCTGATTGCAGTA................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................TAACATACCGCAATGCGTA.................................................................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TAACATACCGAAATGCGTAGAACAA.............................................................................................................................................................................................. 25 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GAACAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 25 0 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................TTACATAACGCAATGCGTAGAACAA.............................................................................................................................................................................................. 25 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGAATAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 26 1 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................TTAACATACCGCAATGCGT..................................................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGTAACATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 28 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......CGGTGCGGCTTTTTTAGCACACGGTTTT........................................................................................................................................................................................................................ 28 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................TAACATACCGCAATGCG...................................................................................................................................................................................................... 17 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.GATCTCGGTGCGGCTTTTTTAGCA................................................................................................................................................................................................................................. 24 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTCGGTGCGGCTTTTTTAGCACACGGT........................................................................................................................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........GTGCGGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 25 0 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
AGATCTCGGTACGGCTTTTTTAGCAC................................................................................................................................................................................................................................ 26 1 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...TCTCGGTGCGGCTTTTTTAGC.................................................................................................................................................................................................................................. 21 0 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........GCGGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 23 0 18 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......CGGTGCGGCTTTTTTAGCACACG............................................................................................................................................................................................................................. 23 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTCGGTGCGGCTTTTTTAGCAC................................................................................................................................................................................................................................ 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TGCGGCTTTTTTAGCACA............................................................................................................................................................................................................................... 18 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATTTTCATTAAGCTG...................................................................................................................... 15 1 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......GTTTCGGCTTTTTTAGCACACGGTT.......................................................................................................................................................................................................................... 25 2 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........TGCGGCTTTTTTAGCACACG............................................................................................................................................................................................................................. 20 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................ATACCGCAATGCGTAGAACAATAGG.......................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...TATCGGTGCGGCTTTTTTAG................................................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................AAAATACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................ACCGCAATGCGTAGAACAATAAGA......................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCAGCTTTTTTAGCAC................................................................................................................................................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................AACATACGGCAATGCGTAGAACAAT............................................................................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........GAAGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................ACATACCGCAACGCGTAGAACAATAAG.......................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GGTGTGGCTTTTTTTGCACACGGTTT......................................................................................................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................GAACAATAAGATCACAGAAGC............................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................AACAATAAGATCACAGAAACCAGT........................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....CTCGGTGCGGCTTTTTTAGC.................................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CCGCAATGCGTAGAACAATA............................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGATCTCGGTGCGGCTTTT....................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AATGAGTAGAATAATAAGATCACA.................................................................................................................................................................................... 24 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.GATCTCGGTGCGGCTTTTTTATCA................................................................................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................CGTAGAACAATAAGATCACAGAAA................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................TACCGCAATGCGTAGAACAATAA........................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTCGGTGCGGCTTTTTTA.................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CCGCAATGCGTAGTACAA.............................................................................................................................................................................................. 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............GGCTTTTTTAGCACACGGTTTTTTT..................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........TGCAGCTTTTTTAGCACACGGTTTT........................................................................................................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
AGATCTCGGTGCGGCTTTTTT..................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........GCAGCTTTTTTAGCACACCGTTTTTT...................................................................................................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................TACCGCAATGCGTAGAACAATAAGCA........................................................................................................................................................................................ 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CGTAGAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 29 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................AGAAACGGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 27 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................AACATACCGCAATGCGTA.................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGCGTAGAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 31 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................GCGTAGAACAATAAGATCACAGAAACC.............................................................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......CGGTGCAGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 29 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......CGGTGCGGCTTTTTTAGC.................................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................ACCGCAATGCGTCGAACAA.............................................................................................................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................ACATACCGCAATGCGTAGAACAG.............................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TACCGTAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......CGGTGCGGCTTTTTT..................................................................................................................................................................................................................................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGCGTAGAACAATAAGATCACAGAAACC.............................................................................................................................................................................. 28 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................TAACATACCACAATGCGTAGAACAA.............................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................AAATACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................TATCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................AAAATACCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CAGCTTTTTTAGCACACGGTTTTTT...................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....CCGGTGCGGCTTTTTTAGCACA............................................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...TCTCGGTGCGGCTTTTTTATCACAC.............................................................................................................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................CCGCAATGAGTAGAATAATAAGA......................................................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................AGAACAATAAGATCACAGAA................................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................TTACCGCAATGCGTAGAACAATAAG.......................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TAGAACAATAAGATCACAGAAACGAGT........................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
GGATCTCGGTGCGGCTTTTTTAC................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................TGCGTAGAACAATAAGATCACAGAAACCA............................................................................................................................................................................. 29 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................TTCAACATACCGCAATGCGTAGAACAA.............................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GGTGCAGCTTTTTTAGCACACGGTTT......................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................TACCGCATTGCGTAGAACAATAAGA......................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................TCAAGCGCCGTCACAG........................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....TCGGTGCGGCTTTTTTAGCAC................................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CCATCCGCAATGCGTAGAACAAT............................................................................................................................................................................................. 23 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCGGTGCGGCTTTTT...................................................................................................................................................................................................................................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTAACATACCACAATGCGTAGAACAA.............................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCAGCTTTTTTAGCACACGGTTTTT....................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................TACCGCAATGCGTAGAACAATAGG.......................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCGGCTTTTTTAGCAGA............................................................................................................................................................................................................................... 17 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:273833-274082 - dsi_26146 TCTAGAGCCAC-----------GCCGAAAAAATCGTGTGCCAAAAAATTGTATGGCGTTACGCATCTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--C----GTCATTGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------TTGTAAAGGTAATTCGACCG------TACCCAGTCTGAAGTTCGGGGCCGTGTCGAGG-AAAGAAGTATTACAGAGTGTTTCTCTTTCCACAGAGCAACGTAACAATT-------T-CCACAATTAA--------------GAAGCATTCAATGGAAGAAGTTCT
droSec2 scaffold_30:77417-77666 - TCTAAAGCCAC-----------GGCAAAAAAATCGTGTGCCAAAAAATTGTATGGCGTTACGCATCTTGT-TA-----TTC-TAGT-GTCTTTGGAA-------------AAA--C----GTCATTGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------TTGTAAAGGTAATTCGACCG------TACCCAGTCTGAAGTTCGGGGCCGTGTCGAGG-AAAGAAGTATTACAGAGTGTTTCTCTTTCCACAGAGCAACGTAACAATT-------T-CCACAATTAA--------------GAAGCATTCAATGGAAGAAGTTCT
dm3 chr2L:22601295-22601498 + ATTTAAATGTTGCTTAAGTCATGGGCA------------------------------------------------------------------------------------------------GATGTGG----TTGAATATAC----------------------------------------------------AAG----TGAAGAATCTGGTAAGTTTAATTCAATCGATGGTAACCCCAGTCGGAAGTTCGTGAAAGTGTCGAGGAAAAGAGGTGTTACGCAGCGCTTCTTTTTTCAGAGCATAAAGAAGCAATTTCTTTTTTTCCACAATAAATGAAATGCTTTTTA-----------------GAGTTCT
droEre2 scaffold_4784:2212255-2212388 - TTTAGAGCCAG-----------CCCGAAAAAATCGTGTGCAAAAAAATCGTATGGCGTTACGCATCTTAT-TA-----TTC-TATT-GTCTTTGGTA-------------CAA--C----CACATTAT-----TAAATATATAT----------------------------------------------------TTTTGTGT--------TCCTAGATTTCATTAAACCG------AAACC--------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:9339388-9339550 + TGCTTAAGTGT-----------GCGTG------------------------------------------------------------------------------------------------TGTGTGC----GTGAGCATAT----------------------------------------------------A----TGT--------ATGTATGGGTA---------------TACCCAGTCGGAACTTCAGG-----------A-AAAGAAGTGTTACAGAGGGCTTCTTTTTCCACAGAACAGCGAATAAACTACTCTTTT-TCACAATTA----GAAGCTGGCTAGAAGCATTGAATGGAAG-------
droBia1 scf7180000297322:930-1067 - TCTAGAGCCAG-----------CAGCAAAAAATCGTGTGCAAAAAAATCGTATGGCGTTATTTATCTTAA-TT-----TTC-TAAT-GTCTTTGGTAATACCGACTTCCCAAT--C----GTCGTTAATGTCTTCAGGGATATT----------------------------------------------------AACAATGT--------TTGTAAATGCA----------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412728:1467-1580 + TCTAGAGCCAG-----------CACCAAAAAACTGTGTGCAAAAAAATCGTATGGCGTTATCCATCTTCA-TA-----TTC-TAAT-GTCTTTGGTT-------------CGTG-TCTGTAA------------CAGTGAATTA----------------------------------------------------GACAGGGT--------TTGTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777176:9462-9645 + TGAAAAGCCAG-----------CACAAAAAATTCGTGTGCAAAAAAATCGTATGGCGTTACGCATCTTGG-TG-----TTTATATTGGTCTTTGGTA-------------AAAGGG----TATATTGTATTCGTGC--------AAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATAT----------------------------------------------------------------------------------------------------------------------------TCTTGT-TCAGGATCA----CCAGCCGAGTCGA----------------------
droKik1 scf7180000302629:20208-20325 - TCAAAAGCCAG-----------CACAAAAAAATCCTGTGCAAAAAAATCGTATGACGTTACTTATCTTATACA-----CTC-TACT-GTCCTTGGTT------------------------TCACCGTAGTC-----GGATTACAAAAATATG-----------------------------------------------------------TTATAAAAATAA---------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3a:1956187-1956275 + TCTGAAGCCAG-----------GCAGAAAAAATCAAGTACAAAAAATTTGTATGGCGCTACTCATCTTAC-TATGTATTTG-TATT-GTCTTTGACC-------------AAA--T----GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_368:15825-15927 + TCTTGAGCCGG-----------T-CAGAAAATTCAAGTACAAAAAATTTGTATGGCGTTACTCATCTTACTTA-----CTCATATT-ATCTTCGCTT-------------A----T----TTCATTATTTTTCATTGGGGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTAGAGCCAC-----------GCCGAAAAAATCGTGTGCCAAAAAATTGTATGGCGTTACGCATCTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--C----GTCATTGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------TTGTAAAGGTAATTCGACCG------TACCCAGTCTGAAGTTCGGGGCCGTGTCGAGG-AAAGAAGTATTACAGAGTGTTTCTCTTTCCACAGAGCAACGTAACAATT-------T-CCACAATTAA--------------GAAGCATTCAATGGAAGAAGTTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................GTATGGCGTTACGCATCT......................................................................................................................................................................................................................................................................................................................182013.802760000276000000000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................24205.0510100030010003402736000
.......................................................................................................................................................................................................................................................TGAAGTTCGGGGCCGTGTCGAGG-AAA.......................................................................................................2614.00400000012001000000
................................................................................................................................................................................................................................................................................................................................................TAA--------------GAAGCATTCAATGGAAGAAGT...2414.00400000001102000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AA.........................................................................................................................................................................................................................................................................2663.8323000050010020411000
..............................................................................................................AAA--C----GTCATTGTGGTCCTGTGGGTA............................................................................................................................................................................................................................................2513.00300000010200000000
.............................................................................................................................................................................................................................................................TCGGGGCCGTGTCGAGG-AAAGAAGTAT................................................................................................2713.00300000000000021000
..........................................................................................................................CATTGTGGTCCTGTGGGTATAC----------------------------------------------------AAC..................................................................................................................................................................................2513.00300000000000030000
...............................................................................................TC-------------AAA--C----GTCATTGTGGTCCTGTGGGTA............................................................................................................................................................................................................................................2713.00300000012000000000
.............................................................................................................................TGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------.....................................................................................................................................................................2713.00300000000010020000
.............................................................................................................................TGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTG..............................................................................................................................................................................2613.00300000000200010000
................................................................................................C-------------AAA--C----GTCATTGTGGTCCTGTGGGTA............................................................................................................................................................................................................................................2613.00300000011000010000
.............................................................................................................................TGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------T....................................................................................................................................................................2812.00200000000001010000
............................................................................................................................................................................................................................................................TTCGGGGCCGTGTCGAGG-AAAGAAGT..................................................................................................2612.00200010001000000000
......................................................................................................................................................................................................................GTAAAGGTAATTCGACCG------TA.........................................................................................................................................2012.00200000020000000000
.................................................................................................................................................................................................................................................CCAGTCTGAAGTTCGGGGCCGTGTC...............................................................................................................2512.00200000020000000000
............................................................................................................................TTGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTG..............................................................................................................................................................................2712.00200000010000010000
.........................................................................................................................................................................................................................................................................................TACAGAGTGTTTCTCTTTCCACAGA.......................................................................2512.00200000000200000000
................................................................................................................................................................................................................................TTCGACCG------TACCCAGTCTGAAGTTCGG........................................................................................................................2712.00200000010100000000
.....................................................................................................................................................................................................................................................TCTGAAGTTCGGGGCCGTGTCGAGG-AA........................................................................................................2712.00200000000100001000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------A..........................................................................................................................................................................................................................................................................25141.71240000000000201111000
..............................................................CATCTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................27201.5030011810031302010000
..TAGAGCCAC-----------GCCGAAAAA..........................................................................................................................................................................................................................................................................................................................................................18201.3026000026000000000000
......................................................................................................................................................................................................................................................CTGAAGTTCGGGGCCGTGTCGAGG-AAA.......................................................................................................2711.00100000001000000000
...............................................................................................TC-------------AAA--C----GTCATTGTGGTCCTGTGG...............................................................................................................................................................................................................................................2411.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................T-------T-CCACAATTAA--------------GAAGCATTCAATGGA.........2711.00100000000100000000
............................................................................................................................TTGTGGTCCTGTGGGTATAC----------------------------------------------------AAC..................................................................................................................................................................................2311.00100000000000010000
..........................................................................................................................................................................................................................................................................................................TCCACAGAGCAACGTAACAATT-------T-C...............................................2411.00100000000001000000
........................................................................................................................................................................................................................................................................................TTACAGAGTGTTTCTCTTTCCAC..........................................................................2311.00100000000001000000
......................................................................................................................................................................................................................................................................................TATTACAGAGTGTTTCTCTTTCCACAGA.......................................................................2811.00100000001000000000
..............................................................................................................................................................................................................................................TACCCAGTCTGAAGTTCGGGGCCGTGT................................................................................................................2711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................CAACGTAACAATT-------T-CCACAATTAA--------------GA......................2611.00100000000010000000
.........................................................................................................................................................................................................................................................................................................TTCCACAGAGCAACGTAACAATT-------T-................................................2411.00100000010000000000
.....................................................................................................................................................................................................................................................TCTGAAGTTCGGGGCCGTGTCGAGG-A.........................................................................................................2611.00100000001000000000
...................................................................TGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--C----GTCA.............................................................................................................................................................................................................................................................3011.00100000010000000000
................................................................................C-TAGT-GTCTTTGGTC-------------AAA--C----GT...............................................................................................................................................................................................................................................................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................GTTTCTCTTTCCACAGAGCAACG.................................................................2311.00100001000000000000
......................................................................................................................................................................................................CAGTGT--------TTGTAAAGGTAATT.......................................................................................................................................................2011.00100000010000000000
................................................................................................C-------------AAA--C----GTCATTGTGGTCCTGG.................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................................................TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--C----GTCATT...........................................................................................................................................................................................................................................................2911.00100000010000000000
.....................................................................................................................................................................................................................TGTAAAGGTAATTCGACCG------TACCCA.....................................................................................................................................2511.00100010000000000000
...............................................................................................TC-------------AAA--C----GTCATTGTGGTC.....................................................................................................................................................................................................................................................1811.00100000000001000000
....................................................................................................................................................................................................................TTGTAAAGGTAATTCGACCG------TACCCA.....................................................................................................................................2611.00100010000000000000
..................................................................................................................................................................................................................................................CAGTCTGAAGTTCGGG.......................................................................................................................1611.00100000000010000000
............................................................................................................................TTGTGGTCCTGTGGGTATAC----------------------------------------------------AACAG................................................................................................................................................................................2511.00100000000001000000
........................................................................................................................................................................................................................................................................TCGAGG-AAAGAAGTATTACAGAGTG.......................................................................................2511.00100000001000000000
........................................................................................................................GTCATTGTGGTCCTGTGGG..............................................................................................................................................................................................................................................1911.00100000000001000000
.............................................................................................................................................................................................................................TAATTCGACCG------TACCCAGTCTGAAGT............................................................................................................................2611.00100000000001000000
........................................................................................................................................................................................................................................................................TCGAGG-AAAGAAGTATTACAGAGTGTT.....................................................................................2711.00100000001000000000
...................................................................................................................................CCTGTGGGTATAC----------------------------------------------------AACAGTGT--------TTGT.................................................................................................................................................................2511.00100000000001000000
................................................................................................C-------------AAA--C----GTCATTGTGGTCCTGTGGGTATA..........................................................................................................................................................................................................................................2811.00100000000001000000
.......................................................................TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--C----G................................................................................................................................................................................................................................................................2411.00100100000000000000
...........................................................................................................................ATTGTGGTCCTGTGGGTATAC----------------------------------------------------AAC..................................................................................................................................................................................2411.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................T-CCACAATTAA--------------GAAGCATTCAATGG..........2511.00100000000010000000
........................................................................................................................................................................................................................................................................................TTACAGAGTGTTTCTCTTTCCACAGA.......................................................................2611.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................TTAA--------------GAAGCATTCAATGGAAGAAGT...2511.00100000001000000000
.............................................................................................................................TGTGGTCCTGTGGGTATAC----------------------------------------------------AACA.................................................................................................................................................................................2311.00100000000000010000
.......................................................................................................................................................................................................................................................TGAAGTTCGGGGCCGTGTCGAGG-A.........................................................................................................2411.00100000001000000000
...........................................................................................................................................................................................................................................................GTTCGGGGCCGTGTCGAGG-AA........................................................................................................2111.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................TTAA--------------GAAGCATTCAATGGAAGAAGTT..2611.00100000001000000000
.......................................................................................................................................................................................................................................................TGAAGTTCGGGGCCGTGTCGAGG-AA........................................................................................................2511.00100000001000000000
........................................................................................................................................................................................................................................................................................TTACAGAGTGTTTCTCTTTCCA...........................................................................2211.00100000000001000000
..................................................................................................................................TCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------TTGT.................................................................................................................................................................2611.00100000000010000000
............................................................................................................................................................................................................................................................................................................CACAGAGCAACGTAACAATT-------T-CCACA...........................................2611.00100000001000000000
.....................................................................................................................................................................................................................................................TCTGAAGTTCGGGGCCGTGTCGAGG-..........................................................................................................2511.00100000010000000000
............................................................................................................................................................................................................................................................TTCGGGGCCGTGTCGAGG-AAAGAAGTA.................................................................................................2711.00100000001000000000
.............................................................................................................................................................................................................................................................TCGGGGCCGTGTCGAGG-AAAGAAGTA.................................................................................................2611.00100000000100000000
..............................................................................TTC-TAGT-GTCTTTGGTC-------------AAA--C----GTCAT............................................................................................................................................................................................................................................................2611.00100000100000000000
...............................................................................................................................TGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------T....................................................................................................................................................................2611.00100000000000010000
...............................................................................................................................................................................................................................................................................AAAGAAGTATTACAGAGTGTT.....................................................................................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................ATTAA--------------GAAGCATTCAATGGAAGAAGT...2611.00100000000010000000
..........................................................................................................................................................................................................................................................................................................TCCACAGAGCAACGTAACAATT-------T-................................................2311.00100000000001000000
...........................................................................................................................................................................................................................GGTAATTCGACCG------TAC........................................................................................................................................1611.00100000000001000000
.............................................................................................................................TGTGGTCCTGTGGGTATAC----------------------------------------------------AACAA................................................................................................................................................................................2411.00100000000000010000
...............................................................................................TC-------------AAA--C----GTCATTGTGGTCCTGTGGG..............................................................................................................................................................................................................................................2511.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................TAA--------------GAAGCATTCAATGGAAGAAGTT..2511.00100000000010000000
...........................................................................................................................................................................................................................................................................AGG-AAAGAAGTATTACAGAGTGTTTC...................................................................................2611.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................T-------T-CCACAATTAA--------------GAAGCATTCAATGGAA........2811.00100000010000000000
...........................................................................................................................................TATAC----------------------------------------------------AACAGTGT--------TTGTA................................................................................................................................................................1811.00100000000001000000
.........................................................................................................................................................................................................................................................................................TACAGAGTGTTTCTCTTTCCACAGAGCA....................................................................2811.00100000000001000000
.........................................................................................................................................................................................................TGT--------TTGTAAAGGTAATTCGACCG------TA.........................................................................................................................................2511.00100000001000000000
..................................................................................................................................................................................................................................................CAGTCTGAAGTTCGGGGCCGTGTCGA.............................................................................................................2611.00100000000001000000
...........................................................................................................................ATTGTGGTCCTGTGGGTATAC----------------------------------------------------A....................................................................................................................................................................................2211.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................T-CCACAATTAA--------------GAAGCATTCAATGGA.........2611.00100000000010000000
..................................................................................................................................................................................................................................................................GCCGTGTCGAGG-AAAGAAGTATTACA............................................................................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................TCTTTCCACAGAGCAACGTAACAAT..........................................................2511.00100000000100000000
...................................TGTGCCAAAAAATTGTATGGCGTTACGCA.........................................................................................................................................................................................................................................................................................................................2930.67200000000110000000
...................................TGTGCCAAAAAATTGTATGGCGTT..............................................................................................................................................................................................................................................................................................................................2430.67200000000002000000
................................TCGTGTGCCAAAAAATTGTATGGCG................................................................................................................................................................................................................................................................................................................................2530.67200000000002000000
................................TCGTGTGCCAAAAAATTGTATGGCGT...............................................................................................................................................................................................................................................................................................................................2630.67200000000002000000
.............................................................GCATCTTGT-TA-----TTC-TAGT-GTCTTTGGT.........................................................................................................................................................................................................................................................................................27200.5511000000000011000000
...............................................................................................................................................C----------------------------------------------------AACAGTGT--------TTGTAAA..............................................................................................................................................................1620.50100000000001000000
..................................................................TTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................23200.45900110000007000000
............................AAAATCGTGTGCCAAAAAATTGTG.....................................................................................................................................................................................................................................................................................................................................2430.33100000000001000000
...................................TGTGCCAAAAAATTGTATGGCGTTACGA..........................................................................................................................................................................................................................................................................................................................2830.33100000000010000000
...................................TGTGCCAAAAAATTGTATGGCGTTAC............................................................................................................................................................................................................................................................................................................................2630.33100000000001000000
..............................................................CATCTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------A..........................................................................................................................................................................................................................................................................28110.27300000012000000000
....................................................................GT-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................21200.25510000000013000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--......................................................................................................................................................................................................................................................................2750.20100000000000010000
.............................................................GCATCTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................28200.20400300000001000000
....................................................................GT-TA-----TTC-TAGT-GTCTTTGGT.........................................................................................................................................................................................................................................................................................20200.20400000000004000000
.........AC-----------GCCGAAAAAATCGTGTGCCAAAAAA..........................................................................................................................................................................................................................................................................................................................................27110.18200000001001000000
TCTAGAGCCAC-----------GCCGAAAAAATCGTG....................................................................................................................................................................................................................................................................................................................................................26120.17200000000002000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAA--A----.................................................................................................................................................................................................................................................................2870.14100000001000000000
..................................................................TTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AA.........................................................................................................................................................................................................................................................................2570.14100000000000001000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAC--T----.................................................................................................................................................................................................................................................................28180.11200000000000002000
.....................................................................T-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................20200.10201100000000000000
...............................................................ATCTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................26200.10200000000002000000
....................................GTGCCAAAAAATTGTATGGCGTTACGA..........................................................................................................................................................................................................................................................................................................................27100.10100000000100000000
.....................................TGCCAAAAAATTGTATGGCGTTACGCT.........................................................................................................................................................................................................................................................................................................................27100.10100000000001000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGG..........................................................................................................................................................................................................................................................................................22200.10200200000000000000
......................................GCCAAAAAATTGTATGGCGTT..............................................................................................................................................................................................................................................................................................................................21120.08100000000001000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------AAC--A----.................................................................................................................................................................................................................................................................28120.08100000000000001000
TCTAGAGCCAC-----------GCCGAAAAAATCGT.....................................................................................................................................................................................................................................................................................................................................................25140.07101000000000000000
..TAGAGCCAC-----------GCCGAAAAAATCGTG....................................................................................................................................................................................................................................................................................................................................................24140.07100000000001000000
..TAGAGCCAC-----------GCCGAAAAAATCG......................................................................................................................................................................................................................................................................................................................................................22170.06100000000001000000
.................................................................CTTGT-TA-----TTC-TAGT-GTC...............................................................................................................................................................................................................................................................................................17200.05100000010000000000
..................................................................TTGT-TA-----TTC-TAGT-GTCTTTGGTC-------------A..........................................................................................................................................................................................................................................................................24200.05100000010000000000
TCTAGAGCCAC-----------GCCGAAAAAA.........................................................................................................................................................................................................................................................................................................................................................21200.05100000000000001000
..TAGAGCCAC-----------GCCGAAAAAA.........................................................................................................................................................................................................................................................................................................................................................19200.05100000001000000000
..............................................................CATCTTGT-TA-----TTC-TAGT-GTCG..............................................................................................................................................................................................................................................................................................21200.05100000100000000000
.......................................................................TA-----TTC-TAGT-GTCTTTGGTC-------------A..........................................................................................................................................................................................................................................................................20200.05101000000000000000
........................CGAAAAAATCGTGTGCCAAAAAA..........................................................................................................................................................................................................................................................................................................................................23200.05100000001000000000
........................................................GTTACGCATCTTGT-TA-----TTC-TA.....................................................................................................................................................................................................................................................................................................21200.05100000000000001000
........................................................................A-----TTC-TAGT-GTCTTTGGTC-------------...........................................................................................................................................................................................................................................................................18200.05100100000000000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCG..............................................................................................................................................................................................................................................................................................18200.05100001000000000000
.................................................................CTTGT-TA-----TTC-TAGT-GTCTTTG...........................................................................................................................................................................................................................................................................................21200.05100000000100000000
droSec2
TCTAAAGCCAC-----------GGCAAAAAAATCGTGTGCCAAAAAATTGTATGGCGTTACGCATCTTGT-TA-----TTC-TAGT-GTCTTTGGAA-------------AAA--C----GTCATTGTGGTCCTGTGGGTATAC----------------------------------------------------AACAGTGT--------TTGTAAAGGTAATTCGACCG------TACCCAGTCTGAAGTTCGGGGCCGTGTCGAGG-AAAGAAGTATTACAGAGTGTTTCTCTTTCCACAGAGCAACGTAACAATT-------T-CCACAATTAA--------------GAAGCATTCAATGGAAGAAGTTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................TGGAA-------------AAA--C----GTCATTGTGGTCCTG..................................................................................................................................................................................................................................................2411.0011000
................................................................................................................................................................................................................................................................................................................................................TAA--------------GAAGCATTCAATGGAAG.......2011.0010001
...................................................................................................................................................................................................................................................AGTCTGAAGTTCGGGGCCGTG.................................................................................................................2111.0010100
.............................................................GCATCTTGT-TA-----TTC-TAGT-GTCTTTGGA.........................................................................................................................................................................................................................................................................................27150.0711000
...................................................................TGT-TA-----TTC-TAGT-GTCTTTGG..........................................................................................................................................................................................................................................................................................20200.0510010
.............................................AATTGTATGGCGTTACGCATC.......................................................................................................................................................................................................................................................................................................................21200.0511000
...............................................TTGTATGGCGTTACGCATCTT.....................................................................................................................................................................................................................................................................................................................21200.0511000
.............................................................GCATCTTGT-TA-----TTC-TAGT-GTCTTTGG..........................................................................................................................................................................................................................................................................................26200.0510010
............................................AAATTGTATGGCGTTACGCAT........................................................................................................................................................................................................................................................................................................................21200.0510001
.................................................GTATGGCGTTACGCATCTTG....................................................................................................................................................................................................................................................................................................................20200.0510001
dm3
ATTTAAATGTTGCTTAAGTCATGGGCA------------------------------------------------------------------------------------------------GATGTGG----TTGAATATAC----------------------------------------------------AAG----TGAAGAATCTGGTAAGTTTAATTCAATCGATGGTAACCCCAGTCGGAAGTTCGTGAAAGTGTCGAGGAAAAGAGGTGTTACGCAGCGCTTCTTTTTTCAGAGCATAAAGAAGCAATTTCTTTTTTTCCACAATAAATGAAATGCTTTTTA-----------------GAGTTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................TGGTAAGTTTAATTCAATCGA................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000
...TAAATGTTGCTTAAGTCATGGGCA------------------------------------------------------------------------------------------------GA............................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGTTGCTTAAGTCATGGGCA------------------------------------------------------------------------------------------------GATG..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CAGAGCATAAAGAAGCAATTTC.......................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGGGCA------------------------------------------------------------------------------------------------GATGTGG----TTGA...............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GAAGTTCGTGAAAGTGTCGAGGAA.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................AAG----TGAAGAATCTGGTAAGTT............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................TCGAGGAAAAGAGGTGTTACGCAGC........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................TCTGGTAAGTTTAATTCAATCGATGGTA...........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAAGTCATGGGCA------------------------------------------------------------------------------------------------GATGTGG----TTGAA..............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AG----TGAAGAATCTGGTAAGTTTAATT.......................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................CCCAGTCGGAAGTTCGTGAAAGTGTC...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GATGGTAACCCCAGTCGGAAGTTCGT........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................C----------------------------------------------------AAG----TGAAGAATCTGGTAAGTTT...........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TCTGGTAAGTTTAATTCAATCGATGG.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTAGAGCCAG-----------CCCGAAAAAATCGTGTGCAAAAAAATCGTATGGCGTTACGCATCTTAT-TA-----TTC-TATT-GTCTTTGGTA-------------CAA--C----CACATTAT-----TAAATATATAT----------------------------------------------------TTTTGTGT--------TCCTAGATTTCATTAAACCG------AAACC--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TGCTTAAGTGT-----------GCGTG------------------------------------------------------------------------------------------------TGTGTGC----GTGAGCATAT----------------------------------------------------A----TGT--------ATGTATGGGTA---------------TACCCAGTCGGAACTTCAGG-----------A-AAAGAAGTGTTACAGAGGGCTTCTTTTTCCACAGAACAGCGAATAAACTACTCTTTT-TCACAATTA----GAAGCTGGCTAGAAGCATTGAATGGAAG-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droBia1
TCTAGAGCCAG-----------CAGCAAAAAATCGTGTGCAAAAAAATCGTATGGCGTTATTTATCTTAA-TT-----TTC-TAAT-GTCTTTGGTAATACCGACTTCCCAAT--C----GTCGTTAATGTCTTCAGGGATATT----------------------------------------------------AACAATGT--------TTGTAAATGCA----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTAGAGCCAG-----------CACCAAAAAACTGTGTGCAAAAAAATCGTATGGCGTTATCCATCTTCA-TA-----TTC-TAAT-GTCTTTGGTT-------------CGTG-TCTGTAA------------CAGTGAATTA----------------------------------------------------GACAGGGT--------TTGTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGAAAAGCCAG-----------CACAAAAAATTCGTGTGCAAAAAAATCGTATGGCGTTACGCATCTTGG-TG-----TTTATATTGGTCTTTGGTA-------------AAAGGG----TATATTGTATTCGTGC--------AAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATAT----------------------------------------------------------------------------------------------------------------------------TCTTGT-TCAGGATCA----CCAGCCGAGTCGA----------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCAAAAGCCAG-----------CACAAAAAAATCCTGTGCAAAAAAATCGTATGACGTTACTTATCTTATACA-----CTC-TACT-GTCCTTGGTT------------------------TCACCGTAGTC-----GGATTACAAAAATATG-----------------------------------------------------------TTATAAAAATAA---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TCTGAAGCCAG-----------GCAGAAAAAATCAAGTACAAAAAATTTGTATGGCGCTACTCATCTTAC-TATGTATTTG-TATT-GTCTTTGACC-------------AAA--T----GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................TAC-TATGTATTTG-TATT-GTCTTTGACC-------------A..........................................................................................................................................................................................................................................................................2811.0010000000100
droPer2
TCTTGAGCCGG-----------T-CAGAAAATTCAAGTACAAAAAATTTGTATGGCGTTACTCATCTTACTTA-----CTCATATT-ATCTTCGCTT-------------A----T----TTCATTATTTTTCATTGGGGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/18/2015 at 03:11 PM