ID:

dsi_2614

 Coordinate:

3r:18723620-18723814 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.5 -22.4 -22.4

Flybase annnotation

five_prime_UTR [3r_18723815_18723894_-]; exon [3r_18723815_18723894_-]; exon [3r_18723468_18723619_-]; CDS [3r_18723468_18723619_-]; intron [3r_18723620_18723814_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACAATTGTCACTTTTCCGCACGAAAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAAGGTTTAAAATACATACATAATGATTGAGGGAGTTCAAATTAAATACAAGATACAGTTGCTAGCAAAGTCGGCTTGAAAACCGATTGGGAAACGTCGAAACAAACAATTGTATTACATAACCTTTTTAAGGTTACATATGAAGAAGGCCGATTTATGCTATTCTAACCAGGATCTATCAATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGC
***********************************************************.(((((......(((.....))).(((((....)))))...........((((((((((.........(((((.......((....)).....)))))......))))))))))...(((((((...)))))))..........)))))*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 M023
head
 M024
male body		 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553488
RT_0-2 hours eggs
..........................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGC....................... 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................TGGCATGCGTGTCCTGCGCACAGAGG. 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................ATTTGCAAAGGAAAATAAGATGCT................................................................................................................................................................................................................................................ 24 3 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGC....................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................AGGTTTAAAATACATACAT......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................CGAAAGTTAGCATTTGCAAAG.............................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCG...................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................AGTTAGCATTTGCAAAGGAAAAT........................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............TTTCCGCACGAAAGTTAGC........................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GGCATGCGTGTCCTGCGCACAGA... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................GAAAGTTAGCATTTGCAAAGG............................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TAGCATTTGCAAAGGAAAATAAGA.................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTG............................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................TAAGATGCTGTCGCAATCCCTGCTGAG........................... 27 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................TAGCATTTGCAAAGGAAAATAAGAT................................................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........CACTTTTCCGCACGAAAGTTAGCATT..................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................GCACGAAAGTTAGCATTTGCAAAGGA............................................................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................TGGCATGCGTGTCCTGCGCACAGAG.. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGCGCACAGAGG. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GTTAGCATTTGCAAAGGAA........................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........TTTTCCGCACGAAAGTTAGCATT..................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
......GTCACTTTTCCGCACGAAAGT............................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................TAAGTGGCATGCGTGTCCTGCGCACA..... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................TTTGCAAAGGAAAATAAGGTGAA................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................ATGCGTGTCCTGCGCACAGAGG. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................CGCACGAAAGTTAGCATTTGCAAAGGA............................................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TCCCTGCTGAGTGGCATGCGTGTCC............. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................ATGCGTGTCCTGCGCACAGAGGC 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............TTCCGCACGAAAGTTAGCATTTGCAAA............................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................CATGCGTGTCCTGCGCACAGAGGC 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....TGTCACTTTTCCGCACGAAAGTTAGCA....................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTTACATATGAAGAAGGCC....................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................TTGGGAAACGTCGAAACAAAT................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............TTCCGCACGAAAGTTAGCATTTG................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
..................CACGAAAGTTAGCATTTG................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................CACGAAAGTTAGCATTTGCAAAGGAAAA......................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................CATTTGCAAAGGAAAATAA...................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................GCACGAAAGTTAGCA....................................................................................................................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................AGCATTTGCCAAGGA............................................................................................................................................................................................................................................................ 15 1 20 0.95 19 0 0 0 0 0 0 0 0 0 19 0 0
...........................TAGCATTTGCAAAGG............................................................................................................................................................................................................................................................. 15 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................TGGGAAACGTCAAAACAAAAATT................................................................................................................................ 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
................................TTTGCAAAGGAAAATAAGATGCT................................................................................................................................................................................................................................................ 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................TGCTGTCGCAGTCCATGCT.............................. 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................CTGTCGCAGTCCATGCTG............................. 18 2 9 0.22 2 0 0 0 0 0 0 0 0 0 0 2 0
......................................................................................................................................................................................................................................................TGCTATCGCAGTCCATGCTG............................. 20 3 11 0.18 2 0 0 0 0 0 0 0 0 0 0 2 0
...............................................................................................................................................................................................TACATATGAAAAAGGC........................................................................................ 16 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................GCAAAGGAAAATAAGATGC................................................................................................................................................................................................................................................. 19 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTGAAAACCGATCGG.................................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................GCTTGTAACCCGGTTGGGA.................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................GTTAAATCTGAAGACGGCC....................................................................................... 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCTAGCGAAGTCGG.................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................GCAAAGGAAAATAAGATGCT................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAGGTTACATTAGAAG............................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGTTAACAGTGAAAAGGCGTGCTTTCAATCGTAAACGTTTCCTTTTATTCCACTTTTGTTCCAAATTTTATGTATGTATTACTAACTCCCTCAAGTTTAATTTATGTTCTATGTCAACGATCGTTTCAGCCGAACTTTTGGCTAACCCTTTGCAGCTTTGTTTGTTAACATAATGTATTGGAAAAATTCCAATGTATACTTCTTCCGGCTAAATACGATAAGATTGGTCCTAGATAGTTAAGGTCTACGACAGCGTTAGGGACGACTCACCGTACGCACAGGACGCGTGTCTCCG
***************************************************************************************.(((((......(((.....))).(((((....)))))...........((((((((((.........(((((.......((....)).....)))))......))))))))))...(((((((...)))))))..........)))))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
............................................................................................................................................................................................................CCGGCTAAATACGATAAGATT...................................................................... 21 0 1 1.00 1 1 0 0 0
..........................AGTCGTAAACGTTTACTGTTAT....................................................................................................................................................................................................................................................... 22 3 5 0.20 1 0 1 0 0
..............................................................................TTAGTCACTCTCTCAAGTTT..................................................................................................................................................................................................... 20 3 7 0.14 1 0 1 0 0
.............................................................................................................................................................TTGTTTGTGAAAATAATGTA...................................................................................................................... 20 2 9 0.11 1 0 1 0 0
..............................................................................................................GTGGCAACGATCGTTTCTG...................................................................................................................................................................... 19 3 12 0.08 1 1 0 0 0
...........................................................................................................................................................................................................................AAGATTGGTCCTAGTTTGA......................................................... 19 3 17 0.06 1 0 0 1 0
.....................................................................................................TTATATTATATGTCGACGAT.............................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:18723570-18723864 - dsi_2614 ACAATTG---TCACTTTTCCGCACGA-----AAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAA-GGTTTAAAATA-CAT---------AC----ATAATGATTG--AGG---------G--AG---------TTCAAATTAAATACAAGATACAGTTGCTA-------GCAAAGTCG-GCTTGAA----------------AACCGATTGGGAAACGTCGAAACAAACAATTG-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--GAAG-------GCCGATTT----------------------ATGCTATTCTAACCAGG--ATCTATC--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGC
droSec2 scaffold_0:19545754-19546048 - ACAATTG---TCACTTTTCCGTACGA-----AAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAA-GATTTAAAATA-CAT---------AC----AAAGGGATTG--AGG---------G--TG---------TACAATTTAAATACAAGATACAGTTGCTA-------GCAAAATCG-GCTTGAA----------------AACCGATTGGGAAACGTCGAAACAAACAATTG-TATTACATAACCTTTTTAAGGTTACATAT-GA----G--GAAG-------GCCGATTT----------------------ATGCTATTCTAACCAGG--ATCTATC--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGC
dm3 chr3R:19181458-19181752 - ACAATTG---TAACTTTTCCGCACGA-----AAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAA-GATTTAAAATA-CAT---------AA----AAATTGATTG--AGG---------G--AA---------TACAATTTGAATACAAGATAAAGTTGCTA-------GCAAAGTCG-GCTTGAA----------------AACCGATTGGGAAACGTCGAAACAAACAATTG-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--GAAG-------GCCGTTTA----------------------TTGCTATTCTAACAAGG--ATCTATC--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGC
droEre2 scaffold_4820:8870876-8871170 + ACAATTG---TCACTTTTCCGCACGA-----AAGTTAGCATTTGCCAAGGAAAAAAAGGTGAAAATAA-GGTTTAAATTA-AAT---------GC----AAAATATTTG--AGG---------G--AG---------TAGAGTTTGAATACCGGATAAAGTGCCTA-------GCAAAGGCA-GCTTGAC----------------ATCCGTTTGGAAAACGTCGAAACAACAAATAG-TATTACATAACCTTTTTAAGGTTACCTAC-GA----A--GGAG-------GCCGAATT----------------------GTGCTATTCTAACAAAG--ATCCATC--CATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGC
droYak3 3R:20059673-20059966 - ACAATTG---TCACTTTTCCGCACGA-----AAGTTAGCATTTGCCAAGATAAATAAGGTGAAAATGG-GATTTAAAAAC-CAT---------A-----AAATTGATTG--GGG---------G--AG---------TAGTGCCTGAATACTTGTAGGAGTATCTA-------GCAAAGGCA-GCTTGAA----------------AGCCGTTTGGAAAACGTCGCAACAACAAATCG-TATTACATAACCTTTTTAAGGTTACCTAT-GA----A--GGAG-------GCCGAATT----------------------ATGATATTCTAACGAAG--ATCTGTC--CATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACTGAGGC
droEug1 scf7180000409473:160135-160429 + ACAATTG---ACACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGGAAAATAAGGTGAAAATAA-CAGTTAAAATA-CAA---------TC----TAAATAATTT--GAA---------G--TG---------TTTTGTTCGAAGAAAAACTATAGTTACTA-------GCTATATCA-GCTTCAA----------------AACTCTCAAGAAAACCCCAAAACAACAACTCG-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--GGAA-------GCCGAAAT----------------------TTACAATTTTAACGAGA--ATCTTTA--AATTCCAGATGCTGTCGCAATCCCTCCTGAGTGGCATGCGTGTCCTGCGCACCGAGGC
droBia1 scf7180000302075:4696470-4696766 - ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGAAAAATAAGGTGAAAAAAA-CGCTTTAAATA-TAT---------TA----CAAATATCTC--AAG---------G--AG---------TGTGTGCTACCCAATAGCTTAGGCGACCA-------TCAATATCA-TTTGCCA----------------AAAACCCCAGGAAACCACTGAACAACAACTCG-CATTACATAACCTTTTTAAGGTTACATAG-GA----A--GGAA-------ACCGAAAT----------------------GAGCAATTTTTAACAAGTTATCCCCG--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTGCTGCGCACCGAAGC
droTak1 scf7180000414295:258300-258597 - ACAATTG---ACACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGGAAAATAAGGTGAAAATAG-CAATTAAAAAG-TAG---------AA----AAACTACTTT--TAA---------G--AG---------TGCATACTGATAAAAAGCAATAGTTCCCA-------GCAAAATCA-TATACAA----------------AATACCCCAGGAACCCGCGAAACAACAACTCG-TATTACATAACCTTTTTAAGGTTACATAT-AA----GG-GGAA-------GCCGAAAT----------------------ATGCAATTCTAACCAGAATATCCTTA--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACCGAGGC
droEle1 scf7180000491280:301881-302167 - ACAATTG---AGACTTTTCCGCACGA-----AAGCTTGCATTTGCCAAGGAAAATAAGGTAACAAAAG-TAGTTATATTA-TAA---------TC----AATATAATTC--ACG---------G--TA---------TGTGGATCGACGAATTGTATAACTCACTG-------GCAAATTCA-GCGCCGA----------------AAACCTTCAGAAACCCGCAAAAAAACAAATCG-CATTACATAACCTTTTTAAGGTTACATAT-GA----G--GGAA-------GCCGAACT------------------------------ATAACAAAG--TTCTTTA--TTTTTCAGATGCTGTCGCAATCCCTGCTGAGTGGTGTCCGTGTGCTGCGCACCGAGGC
droRho1 scf7180000780099:144425-144719 - ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCTAAGGAAAATAAGGTGAAAATAA-CAGTTTAAATA-AAA---------TC----AAAATAATTC--AGA---------G--AG---------TGTGGACAGAAGAATTGTGGGACCTGCAT-------GCAAAATCA-GCTTCGA----------------AACAATCCACAAACCCGCAAAACAACAACTCG-TATTACATAACCTTTTTAAGGTTACATAT-GA----G--GGAA-------GCCGAAAT----------------------ATGCAATTTTAACAAAG--TTCCATT--ATTTCCAGATGCTGTCGCAATCCCTGCTGAATGGCGTGCGCGTCCTGCGCACCGAGGC
droFic1 scf7180000453906:669845-670137 + ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGAAAAACAAGGTGAAAATAA-CAGTTAAAATA-CAA---------T-----AATTTATTTT--TAA---------G--AG---------TATTGGCTGAGACATAGTGGGGCTAACAT-------TTAAAATCA-ATACCAT----------------ATCTCTCCAGAAAACCGCGAAAAAACAACTTG-CATTACATAACCTTTTTAAGGTTACATAT-GA----A--G-AT-------GCCAAAAT----------------------ATGCTATTTTAACACAA--TTCTATA--ATTTCTAGATGTTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACCGAGGC
droKik1 scf7180000302307:378959-379254 + ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGGAAATTAAGGTAAAAATAG-GATTTGAAATG-GGA---------TT----TAAATACTTC--TTT---------G--AG---------AGTGAACTGACAACCTGCCGGGACTACTA-------GCAATATCA-GCTCCCG----------------GATACTCCAGGAATCACGGCAACAACAAATCG-TATTACATAACCTTTTTAAGGTTACATAT-GA----G--GGAA-------GCCGAAAT----------------------CCGCAATTCTAAATGTT---TTAATCCAAATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTGCTGCGCACCGAGGC
droAna3 scaffold_13340:8205172-8205458 + ACAATTG---ACTGTTTTCCGTGCGA-----AAGTTTGCAATTCCAAAGGAAATTAAGGTAAAAATAG-CATTATAAAGA-AGG---------TT----T-----------AAAAGGTCTTAATGGCAACCGAAAACT-GAAACAGAGACCCAG----------TA-------GGGACGACA-GCTTACG---------------AAAC-CGGCAGGAACCTCATAAATAACAAATCA-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--TAAC-------------------------------------CCGCGATTCTAATTGAT--TGTAATC--CTCTCCAGATGCTGTCGCAATCCCTGCTGACTGGCATGCGTGTGCTGCGCACCGAAGC
droBip1 scf7180000396708:628418-628705 - ACAATTG---ACTGTTTTCCGTGCGA-----AAGTTTGCATTTGCGAAGGAAATTAAGGTAAAAATAG-CTTTATAAATA-AAG---------TT----T-----------AAGGAGTTGGAAAGGAAAACAAAAACC-GAAACTAAGATCCTGTGGG-----------------GACGACA-GTTTTTA---------------AAACCGGCTGGACACCTCTTAAACAACAAATCA-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--TAAC-------------------------------------CCGCGATTCTAATTGAC--TCTAATC--CTCTCCAGATGCTGTCGCAATCCCTGCTGAATGGCGTGCGTGTCCTGCGCACCGAAGC
dp5 2:3645777-3646065 + TCAAT------CACTTTTCAACAAAA-----AAGTTTGCA-------ACGAATAAAAGGTAAAAACTA-TATAGAAACAA-TAT---------AG----AAAAGGATCTGGAAG---------G--AG-----------TGTGCTAAAGGACTTCGTGAACT----ATAACTAGCGAAA----GCTTTGG----------------ATAGCTTTTTGAATTAGCAAAACAACACCACA-TATTACATAACCTTTTTAAGGTTACATAG-GA----GAGGATA-------GCTGAAAT--------------------TCGCGCAATTCTAAGATAT---TCTATTT-ACCTGCAGATGCTGTCGCAATCAATTCTGACTGGTGTGCGTGTGCTCCGCACGGAGGC
droPer2 scaffold_7:703959-704247 - TCAAT------CACTTTTCAACAAAA-----AAGTTTGCA-------ACGAATAAAAGGTAAAAACTA-TATAGAAAAAA-TAT---------AG----AAAAGGATCT--GGA---------A--GG---------TCTGTTCTAAATGACTTCGTGAACT----ATAACTAGCGAAA----GCTTTGG----------------ATATCTTTGTGAATTAGCAAAACAACACCACA-TATTACATAACCTTTTTAAGGTTACATTG-GA----GAGGATA-------GCTGAAAT--------------------TCGCGCAATTCTAAGATAT---TCTATTT-ACCTGCAGATGCTGTCGCAATCAATTCTGACTGGTGTGCGTGTGCTCCGCACGGAGGC
droWil2 scf2_1100000004902:11701989-11702312 + ACAATTGTTAACAATTTTCCATCCAAACA--GGATTTGCGTTTGCTAAGGAAAATAAGGTAAAAGCTGAGTAATAAAATTAAATGCTCTAAGATC----TAAATCATTT--AA----------TGGTG---------T-TGGACAGAGATATTGTATC-----------------CCAGACA-GTCTTTT----------CTGATTAAGTCATAGGCAAAAACATAAACCACAGCTGACAATTACATAACCTTTTTAAGGTTACAAAATAATTGGC--AAATGCC----GCAGAAATATAAAGAATTA-----------T---TAATA-AAGCGGG--CTTAATC--CTTTGCAGATGCTGACACAGACAATTCTGAATGGAGTGCGTGTGCTCCGCACTGAGGC
droVir3 scaffold_13047:466479-466785 - -CGGTTG---ACAATTTTCCCCACATACAGTACAGAGGCATTTGAAAAGGAAAATATGGTAATAAAAA-AAGAGTA-----------------------AAAATGATTT--GAAAAGTAAAAAAGTAAATAAGTAAAT-AATAATAA--------TAAACCACTTG-------GCATATGCAAACTTGTTAATACATATT-TTG-AAACTA-----TAAGCTCTGCAAATGCAAAATG-TATTACATAACCTT-TTAAGGTTACCGAA-TT----G--CTACCACAGAGGAAGATTA----------------------ACGCTATTTTATCG--------------TATTACAGATGCTGTCGCAATCAATTTTAACCGGCGTCCGTGTTCTACGCACTGAGGC
droMoj3 scaffold_6540:4336299-4336576 - CA-----------ATTTTCCACATATATAGTACAATAGCATTTGAAAA-TAAAATAAGGTAAAGAAAA-AGCATTAAATA-AAC---------TG----T-----------GAA-------------G-----------CATATTAAACCAATACCAAGATT----TCACCTGGAGTAA----GATATTCATAACCTACG-------TCAGATCACCTAACGCTACATAAACAACATG-CATTACATAACCTT-TTAAGGTTACCAAA-TT----G--TTAG-------CACGA-------------------------------ATATACTTGAA--ATCTATTG-TTTTGTAGATGCTGTCGCAATCTATTTTAACCGGTATCCGTGTTCTGCGCACTGAGGC
droGri2 scaffold_14906:13951265-13951566 - ACAATTT---TCC-AAATTCGCACTT-----AAGG-AGCATTTCAAAAGGGAAATAAGGTAAAATTAT-GAACCAAAATT-AAC--TTTAAA-TTTGCCAAAATAATTG--AGG---------T--AC---------CAC--ACAAA---AAACCTAAAGTAACTA-------A-----ACC-GTTTTTA----------TTGA-CAACTA-----AAAGTGCTAGAAAAACAACATG-TATTACATAACCTT-TTAAGGTTACCAAA-AATT--G--TTACGCCGAA-GACAAAAC---AAGAATTGTGTTAAAATTACTAC-------------------AAT--TTTTACAGATGTTGACGCAATCAATTCTATCCGGCGTCCGTGTGCTGAGGACGGAGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAATTG---TCACTTTTCCGCACGA-----AAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAA-GGTTTAAAATA-CAT---------AC----ATAATGATTG--AGG---------G--AG---------TTCAAATTAAATACAAGATACAGTTGCTA-------GCAAAGTCG-GCTTGAA----------------AACCGATTGGGAAACGTCGAAACAAACAATTG-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--GAAG-------GCCGATTT----------------------ATGCTATTCTAACCAGG--ATCTATC--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGC.......................2212.00200010000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGCATGCGTGTCCTGCGCACAGAGG.2612.00200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGC.......................2012.00200000000000200000
...................................................................A-GGTTTAAAATA-CAT---------AC----AT................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.......................CGA-----AAGTTAGCATTTGCAAAG....................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCG......................2011.00100000000001000000
................................AGTTAGCATTTGCAAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...............TTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................GGCATGCGTGTCCTGCGCACAGA...2311.00100010000000000000
........................GA-----AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................TAGCATTTGCAAAGGAAAATAAGA..........................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTG.............................2111.00100000000000001000
...........CACTTTTCCGCACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
....................GCACGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGCATGCGTGTCCTGCGCACAGAG..2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGCGCACAGAGG.2711.00100010000000000000
.................................GTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
..............TTTTCCGCACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
......G---TCACTTTTCCGCACGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
........................................TTTGCAAAGGAAAATAAGGTGAA......................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGTCCTGCGCACAGAGG.2211.00100010000000000000
...................CGCACGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGAGTGGCATGCGTGTCC.............2511.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGTCCTGCGCACAGAGGC2311.00100000000000100000
................TTCCGCACGA-----AAGTTAGCATTTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................CATGCGTGTCCTGCGCACAGAGGC2411.00100000000000100000
.....TG---TCACTTTTCCGCACGA-----AAGTTAGCA.............................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...................................................................................................................................................................................................................................................................GTTACATAT-GA----A--GAAG-------GCC.................................................................................................................1911.00110000000000000000
....................................................................................................................................................................................................................TTGGGAAACGTCGAAACAAAT............................................................................................................................................................................2111.00100000000000001000
................TTCCGCACGA-----AAGTTAGCATTTG.........................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....................CACGA-----AAGTTAGCATTTG.........................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................CACGA-----AAGTTAGCATTTGCAAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
......................................CATTTGCAAAGGAAAATAA............................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
....................GCACGA-----AAGTTAGCA.............................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
...................................TAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................1520.50100000001000000000
droSec2
ACAATTG---TCACTTTTCCGTACGA-----AAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAA-GATTTAAAATA-CAT---------AC----AAAGGGATTG--AGG---------G--TG---------TACAATTTAAATACAAGATACAGTTGCTA-------GCAAAATCG-GCTTGAA----------------AACCGATTGGGAAACGTCGAAACAAACAATTG-TATTACATAACCTTTTTAAGGTTACATAT-GA----G--GAAG-------GCCGATTT----------------------ATGCTATTCTAACCAGG--ATCTATC--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGC.......................20117.001703140
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGC.......................2216.0060060
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGCATGC...................2415.0051040
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGT..........................1914.0041030
...............TTTCCGTACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................1914.0040040
.......................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCATGCGTGTCCT............1813.0030030
......................ACGA-----AAGTTAGCATTTGCAAAG....................................................................................................................................................................................................................................................................................................................................................................2213.0030030
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCCCTGCTGAGTGGC.......................2413.0030120
........................GA-----AAGTTAGCATTTGCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2413.0030030
.......................CGA-----AAGTTAGCATTTGCAAAG....................................................................................................................................................................................................................................................................................................................................................................2112.0020020
.................................GTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................1812.0020020
.CAATTG---TCACTTTTCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGT...............1812.0020020
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCATGCGTGTC..............2812.0020110
...............................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGAGTGGCATGCGTGTCC.............2512.0021010
.....................................................................................................................................................................................................................................................................................................................................................................GCTGTCGCAATCCCTGCTGAGTGGC.......................2512.0020020
.....TG---TCACTTTTCCGTACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2612.0021010
.................................GTTAGCATTTGCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2012.0020020
....................GTACGA-----AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2512.0020110
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCCCTGCTGAGT..........................2512.0020020
......................ACGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2412.0020020
.................................................................................................................................................................................................................................................................................................................................................................AGATGCTGTCGCAATCCCTGCTGAGT..........................2612.0020020
......................ACGA-----AAGTTAGCATTTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2112.0020020
................TTCCGTACGA-----AAGTTAGCATTTGC........................................................................................................................................................................................................................................................................................................................................................................2412.0020110
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGAGTGGC.......................2612.0020110
.......................................ATTTGCAAAGGAAAATAAG...........................................................................................................................................................................................................................................................................................................................................................1912.0020020
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGTC..............2012.0020110
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGTGGC.......................2312.0020020
.CAATTG---TCACTTTTCCGTAC.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTCCTGCGCACA.....2811.0010100
......................................................................................................................................................................................................................................................................................................................................................................................TGAGTGGCATGCGTGTCCTGC..........2111.0010100
...............................AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...............TTTCCGTACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................GTACGA-----AAGTTAGCATTTG.........................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......G---TCACTTTTCCGTACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2811.0010001
....................GTACGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2611.0010010
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGCATGCGT.................2811.0010010
.............CTTTTCCGTACGA-----AAGTTAGCATTTGCA.......................................................................................................................................................................................................................................................................................................................................................................2811.0010010
...............................AAGTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGCGT.................2211.0010010
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGCGTGTCC.............2611.0010010
................TTCCGTACGA-----AAGTTAGCATTTGCA.......................................................................................................................................................................................................................................................................................................................................................................2511.0010100
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGTCC.............2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGT..........................2011.0010010
...................................................................................................................................................................................................................................................................GTTACATAT-GA----G--GAAG-------GCCGATTT----------------------AT....................................................................................2611.0010001
...................CGTACGA-----AAGTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.........................A-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................A-----AAGTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...........CACTTTTCCGTACGA-----AAG...................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................AGATGCTGTCGCAATCCC..................................1811.0011000
...............TTTCCGTACGA-----AAGTTAGCATTTGC........................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..AATTG---TCACTTTTCCGTAC.............................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...............................................................................A-CAT---------AC----AAAGGGATTG--AG....................................................................................................................................................................................................................................................................................................1811.0011000
.......................CGA-----AAGTTAGCATTTGCAAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2711.0010100
...............................AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.........................................TTGCAAAGGAAAATAAGGTGAAA.....................................................................................................................................................................................................................................................................................................................................................2311.0010100
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTCC.............2011.0010100
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATGC...................2111.0010010
........................GA-----AAGTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........................GA-----AAGTTAGCATTTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTGAGTGGC.......................2711.0010010
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCCCTGCTGAGTG.........................2611.0010010
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGAGT..........................2311.0010010
.CAATTG---TCACTTTTCCGTACGA-----AAG...................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
........................................................................................................................................................................................................................................................................................................................................................................................AGTGGCATGCGTGTCCTGCGC........2111.0010100
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGTCCT............2211.0010100
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGG........................1911.0010010
.................TCCGTACGA-----AAGTTAGCAT............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......................CGA-----AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.......................................ATTTGCAAAGGAAAATAAGA..........................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............................................................................................AC----AAAGGGATTG--AGG---------G--TG---------TACAAT......................................................................................................................................................................................................................................................................2411.0010100
................................AGTTAGCATTTGCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATGCGTGTCC.............2711.0010100
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTC..............1911.0010010
........................GA-----AAGTTAGCATTTGCAAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2511.0010100
.....................................................................................................................................................................................................................................................................................................................................................................GCTGTCGCAATCCCTGCTGAGT..........................2211.0010010
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGG........................2111.0010010
.................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGAGTGGCATGCGTGTC..............2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTGAGT..........................2411.0010010
................TTCCGTACGA-----AAGTTAGCAT............................................................................................................................................................................................................................................................................................................................................................................2011.0011000
........................GA-----AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.................TCCGTACGA-----AAGTTAGCATTTGC........................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGCGCACAGA...2511.0010010
.................................GTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................1911.0010001
......................................CATTTGCAAAGGAAAATAAGA..........................................................................................................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................................................................................................................................................................................................................................GCTATTCTAACCAGG--ATCTA..............................................................2011.0011000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGCG..................2111.0011000
.....................TACGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...............................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGAGTGGCATGC...................1911.0010010
.......................................................................................................................................................................................................................................................................CATAT-GA----G--GAAG-------GCCGATT.............................................................................................................1911.0010001
...............................AAGTTAGCATTTGCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCATG....................2211.0010001
...................................TAGCATTTGCAAAGGAAAATAAGA..........................................................................................................................................................................................................................................................................................................................................................2411.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGAGTGGCATGCGTGTCC.............1911.0010010
.........................................TTGCAAAGGAAAATAAGG..........................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................AAGTTAGCATTTGCAAAG....................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCATGCGTGTCC.............2911.0010100
..................CCGTACGA-----AAGTTAGCATTTGCAAAG....................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...............................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGAGTGGCATGCG..................2011.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGC..........1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATGCG..................2211.0010100
....................GTACGA-----AAGTTAGCATTTGCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2811.0010100
....................GTACGA-----AAGTTAGCATTTGCAAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2911.0010100
................................................................................................................................................................................................................................................................................................................................................................................CCCTGCTGAGTGGCATGCGTGTCC.............2411.0011000
..............TTTTCCGTACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2311.0010100
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGCATGC...................2611.0010010
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGC...................2011.0010010
....................GTACGA-----AAGTTAGCATTTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................T---------AC----AAAGGGATTG--AGG---------G--TG---------TACAAT......................................................................................................................................................................................................................................................................2511.0010100
..................................................................................................................................................................................................................................................................................................................................................................................CTGCTGAGTGGCATGCGTGTCC.............2211.0010100
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGAGTGGCATGCGTGTCC.............2811.0010100
.......................CGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...........................................GCAAAGGAAAATAAGGTG........................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................ACGA-----AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.......................................................................................................................................................................................GCTTGAA----------------AACCGATTGGGAAACGT......................................................................................................................................................................................2411.0010100
..............TTTTCCGTACGA-----AAGTTAGCATTTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2911.0011000
...............TTTCCGTACGA-----AAGTTAGCATTTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2811.0010010
dm3
ACAATTG---TAACTTTTCCGCACGA-----AAGTTAGCATTTGCAAAGGAAAATAAGGTGAAAACAA-GATTTAAAATA-CAT---------AA----AAATTGATTG--AGG---------G--AA---------TACAATTTGAATACAAGATAAAGTTGCTA-------GCAAAGTCG-GCTTGAA----------------AACCGATTGGGAAACGTCGAAACAAACAATTG-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--GAAG-------GCCGTTTA----------------------TTGCTATTCTAACAAGG--ATCTATC--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGAGTGGCATGCGTGTCC.............25112.00120000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000100100000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000020000001000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGCGCACAGAG..26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100011000000000000000000000000100000000200100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCCCTGCTGAGT..........................2118.0080000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000001011000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
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..AATTG---TAACTTTTCCGCACGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................A-----AAGTTAGCATTTGCAAAGGAAAATA.............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................ATACAAGATAAAGTTGCTA-------GC......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTTAGCATTTGCAAAGGAAAATAAG...........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGAGT..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGATGCTGTCGCAATCCCTGCTGAGTGGCA......................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTCCTG...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CATTTGCAAAGGAAAATAAGG..........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............TTTCCGCACGA-----AAGTTAGCAT............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCTGTCGCAATCCCTGCTGAGT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGTGGCATGCG..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGCA......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTCCGCACGA-----AAGTTAGCAT............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACGA-----AAGTTAGCATTTGCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.................................GTTAGCATTTGCAAAGGAAAATAA............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................GTTAGCATTTGCAAAGGAAAATA.............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTGAGTGGCA......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGAGTGGCATGCGTGT...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGA-----AAGTTAGCATTTGCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TG---TAACTTTTCCGCACGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCATGCGTGTCCTGC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................TCCGCACGA-----AAGTTAGCATTTGCAAAG....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGCGTG................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGTGGCATGCGG.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTCCTGCGCACAG....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTTGCAAAGGAAAATAAGGTGAAAAC...................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCCCTGCTGAG...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................ATTTGCAAAGGAAAATAAGA..........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......G---TAACTTTTCCGCACGA-----AAGTTAGCATTT..........................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GA-----AAGTTAGCATTTGCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................AGTGGCATGCGTGTCCTGCGCACC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGATGCTGTCGCAATCCCTGCTG.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TAGCATTTGCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGCATGCGTGTCCTGCGCACAGA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACAATTG---TCACTTTTCCGCACGA-----AAGTTAGCATTTGCCAAGGAAAAAAAGGTGAAAATAA-GGTTTAAATTA-AAT---------GC----AAAATATTTG--AGG---------G--AG---------TAGAGTTTGAATACCGGATAAAGTGCCTA-------GCAAAGGCA-GCTTGAC----------------ATCCGTTTGGAAAACGTCGAAACAACAAATAG-TATTACATAACCTTTTTAAGGTTACCTAC-GA----A--GGAG-------GCCGAATT----------------------GTGCTATTCTAACAAAG--ATCCATC--CATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGTCCTGCGCACAGAGGC2314.0041101010
...............TTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................1913.0031100100
.......................................ATTTGCCAAGGAAAAAAAG...........................................................................................................................................................................................................................................................................................................................................................1913.0030001020
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGCA......................2312.0021000100
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTGAGT..........................2412.0021100000
..............TTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2012.0020200000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGC.......................2212.0020100010
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGC...................2012.0021000100
..................................................................................................................................................................................................................................................................................................................................................................................CTGCTGAGTGGCATGCGTGTCCT............2312.0022000000
.......................................ATTTGCCAAGGAAAAAAA............................................................................................................................................................................................................................................................................................................................................................1812.0020002000
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCCCTGCTGAGTGGC.......................2412.0022000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGCATGC...................2411.0011000000
.......................................................................................................................................................................................GCTTGAC----------------ATCCGTTTGGAA...........................................................................................................................................................................................1911.0011000000
................................AGTTAGCATTTGCCAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCCCTGCTGAGTGGC.......................2711.0010000010
...............TTTCCGCACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCCCTGCTGAGT..........................2111.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................GGCATGCGTGTCCTGCGCACAGAGGC2611.0010000010
......................ACGA-----AAGTTAGCATTTGCCAAGG...................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..................................................................................................................................................................................GGCA-GCTTGAC----------------ATCCGTTTGGAAAAC........................................................................................................................................................................................2611.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATG....................2011.0010000100
.........................A-----AAGTTAGCATTTGCCAAG....................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCCCTGCTGAGTGGCA......................2911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................CATGCGTGTCCTGCGCACAGAGGC2411.0011000000
.........................................TTGCCAAGGAAAAAAAGG..........................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGTCC.............2111.0010000010
....................GCACGA-----AAGTTAGCATTTGCCAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATGCGT.................2311.0011000000
...............................AAGTTAGCATTTGCCAAGG...................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
....................GCACGA-----AAGTTAGCATTTGCCAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...............................AAGTTAGCATTTGCCAAGGAAAAAAA............................................................................................................................................................................................................................................................................................................................................................2611.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGTCCTGCGCACA.....1811.0011000000
....TTG---TCACTTTTCCGCACGA-----AAGTTAGCA.............................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.......................CGA-----AAGTTAGCATTTGCCAAGGAAAAA..............................................................................................................................................................................................................................................................................................................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGAGTGGC.......................2611.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGTGGCA......................2411.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCATGCGTGTCCT............1811.0010000100
......................................CATTTGCCAAGGAAAAAAAA...........................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................CTGAGTGGCATGCGTGTCC.............1911.0010000100
................................AGTTAGCATTTGCCAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATG....................1911.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGCGCA.......2111.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGTCCTGCGCACA.....2911.0010000100
........................GA-----AAGTTAGCATTTGCCAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.................................GTTAGCATTTGCCAAGGA..................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
...ATTG---TCACTTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................TGAGTGGCATGCGTGTCCTGCGCAC......2511.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCATGCGT.................2511.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGC.......................2011.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTCCTGC..........2311.0010000100
.................................GTTAGCATTTGCCAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........................GA-----AAGTTAGCATTTGCCAAGGAAAAAAA............................................................................................................................................................................................................................................................................................................................................................2811.0010001000
...........................................GCCAAGGAAAAAAAGGTG........................................................................................................................................................................................................................................................................................................................................................1811.0010000010
................................AGTTAGCATTTGCCAAGGA..................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................................................................A-AAT---------GC----AAAATATTTG--AGG---------G--A......................................................................................................................................................................................................................................................................................2111.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................CTGCTGAGTGGCATGCGTGTCC.............2211.0011000000
...ATTG---TCACTTTTCCGCACGA-----AAGTTA................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
........................GA-----AAGTTAGCATTTGCCAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2511.0010000010
......................................................................................................................................................CCGGATAAAGTGCCTA-------GCAAA...................................................................................................................................................................................................................................2111.0011000000
......G---TCACTTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
..........TCACTTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
...........CACTTTTCCGCACGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTCCTGCGCACAGAGG.2111.0010000100
.........................A-----AAGTTAGCATTTGCCAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
....................GCACGA-----AAGTTAGCATTTG.........................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.........................A-----AAGTTAGCATTTGCCAAGGA..................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGCATGCGT.................2811.0010001000
.....................CACGA-----AAGTTAGCATTTGCCAA.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.............CTTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
........................GA-----AAGTTAGCATTTGCCAAGGA..................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGCGTGTCCTGCGCACAGAGGC2811.0010100000
................................................................................................................................................................................................................................................................................................................................................................................CCCTGCTGAGTGGCATGCGTGTCC.............2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATGC...................2111.0011000000
.CAATTG---TCACTTTTCCGCACGA-----......................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................CATGCGTGTCCTGCGCACAGAGGA2411.0010001000
...............TTTCCGCACGA-----AAGTTAGCA.............................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................AGCATTTGCCAAGGAC.................................................................................................................................................................................................................................................................................................................................................................16100.4040000004
droYak3
ACAATTG---TCACTTTTCCGCACGA-----AAGTTAGCATTTGCCAAGATAAATAAGGTGAAAATGG-GATTTAAAAAC-CAT---------A-----AAATTGATTG--GGG---------G--AG---------TAGTGCCTGAATACTTGTAGGAGTATCTA-------GCAAAGGCA-GCTTGAA----------------AGCCGTTTGGAAAACGTCGCAACAACAAATCG-TATTACATAACCTTTTTAAGGTTACCTAT-GA----A--GGAG-------GCCGAATT----------------------ATGATATTCTAACGAAG--ATCTGTC--CATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACTGAGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............TTTTCCGCACGA-----AAGTTAGCATTTGC........................................................................................................................................................................................................................................................................................................................................................................2616.00600000000006
..............TTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2014.00400400000000
...............TTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................1914.00403000010000
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTCC.............2013.00300000030000
.............CTTTTCCGCACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2413.00302000010000
......G---TCACTTTTCCGCACGA-----AAGTTAGC..............................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGCATGCGT.................2812.00200000020000
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGTCC.............2112.00200000020000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGC.......................2012.00200000110000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGCT......................2111.00100000100000
...............TTTCCGCACGA-----AAGTTAGCA.............................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCTGCGCACTGAGGC1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGTGGC.......................2311.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGAGTGGCATGCGT.................2311.00101000000000
.............CTTTTCCGCACGA-----AAGTTAGCATTT..........................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.CAATTG---TCACTTTTCCGCACGA-----A.....................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.CAATTG---TCACTTTTCCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............CTTTTCCGCACGA-----AAGTTAGCATTTGCC.......................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCCCTGCTGAGT..........................2111.00100000100000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGAGTGGCATG....................2311.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCCCTGCTGAGTGGCATG....................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGC...............................1811.00101000000000
................TTCCGCACGA-----AAGTTAGCATT...........................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................CGA-----AAGTTAGCATTTGCCAAG....................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCGCAATCCCTGCTGAGTGGC.......................2111.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................CATGCGTGTCCTGCGCACTGAG..2211.00100001000000
...................................TAGCATTTGCCAAGATAAATAAGA..........................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................GCTGTCGCAATCCCTGCTGAGTGG........................2411.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGAGTGGC.......................2211.00100010000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGAGTGGCATGCGT.................2211.00100100000000
...............................................................................................................................G---------TAGTGCCTGAATACTTGTAGGAGC....................................................................................................................................................................................................................................................2511.00100100000000
......G---TCACTTTTCCGCACGA-----AA....................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
........................GA-----AAGTTAGCATTTGCCAAG....................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTGGCATGCGTGT...............1911.00100010000000
...ATTG---TCACTTTTCCGCACGA-----A.....................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.....................................................................................................................................................................................................................................................................TACCTAT-GA----A--GGAG-------GCCGAATT----------------------ATGAT.................................................................................2711.00100000010000
.................TCCGCACGA-----AAGTTAGCATTTGCCAAGA...................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..........................................................................................................................................................................................................................................................................................................................................ACGAAG--ATCTGTC--CATTCCAGA.................................................2211.00100000100000
............................................................................................................................................................................................AA----------------AGCCGTTTGGAAAACGT......................................................................................................................................................................................1911.00100000010000
...............TTTCCGCACGA-----AAGTTAGCATTTGCCAA.....................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..............TTTTCCGCACGA-----AAGTTAGCA.............................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGAGTGGCATGCGTGTC..............2711.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGAGTGGCATGCGTGT...............2711.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGCATGCGTGTCCTGCGCA.......2011.00100010000000
....................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTGGCATGCGTGTCCTGCGCACTG....2911.00100000010000
......G---TCACTTTTCCGCACGA-----AAGTT.................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
droEug1
ACAATTG---ACACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGGAAAATAAGGTGAAAATAA-CAGTTAAAATA-CAA---------TC----TAAATAATTT--GAA---------G--TG---------TTTTGTTCGAAGAAAAACTATAGTTACTA-------GCTATATCA-GCTTCAA----------------AACTCTCAAGAAAACCCCAAAACAACAACTCG-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--GGAA-------GCCGAAAT----------------------TTACAATTTTAACGAGA--ATCTTTA--AATTCCAGATGCTGTCGCAATCCCTCCTGAGTGGCATGCGTGTCCTGCGCACCGAGGCSizeHit CountTotal NormTotal
No Reads
droBia1
ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGAAAAATAAGGTGAAAAAAA-CGCTTTAAATA-TAT---------TA----CAAATATCTC--AAG---------G--AG---------TGTGTGCTACCCAATAGCTTAGGCGACCA-------TCAATATCA-TTTGCCA----------------AAAACCCCAGGAAACCACTGAACAACAACTCG-CATTACATAACCTTTTTAAGGTTACATAG-GA----A--GGAA-------ACCGAAAT----------------------GAGCAATTTTTAACAAGTTATCCCCG--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTGCTGCGCACCGAAGCSizeHit CountTotal NormTotal
No Reads
droTak1
ACAATTG---ACACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGGAAAATAAGGTGAAAATAG-CAATTAAAAAG-TAG---------AA----AAACTACTTT--TAA---------G--AG---------TGCATACTGATAAAAAGCAATAGTTCCCA-------GCAAAATCA-TATACAA----------------AATACCCCAGGAACCCGCGAAACAACAACTCG-TATTACATAACCTTTTTAAGGTTACATAT-AA----GG-GGAA-------GCCGAAAT----------------------ATGCAATTCTAACCAGAATATCCTTA--AATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACCGAGGCSizeHit CountTotal NormTotal
No Reads
droEle1
ACAATTG---AGACTTTTCCGCACGA-----AAGCTTGCATTTGCCAAGGAAAATAAGGTAACAAAAG-TAGTTATATTA-TAA---------TC----AATATAATTC--ACG---------G--TA---------TGTGGATCGACGAATTGTATAACTCACTG-------GCAAATTCA-GCGCCGA----------------AAACCTTCAGAAACCCGCAAAAAAACAAATCG-CATTACATAACCTTTTTAAGGTTACATAT-GA----G--GGAA-------GCCGAACT------------------------------ATAACAAAG--TTCTTTA--TTTTTCAGATGCTGTCGCAATCCCTGCTGAGTGGTGTCCGTGTGCTGCGCACCGAGGCSizeHit CountTotal NormTotal
No Reads
droRho1
ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCTAAGGAAAATAAGGTGAAAATAA-CAGTTTAAATA-AAA---------TC----AAAATAATTC--AGA---------G--AG---------TGTGGACAGAAGAATTGTGGGACCTGCAT-------GCAAAATCA-GCTTCGA----------------AACAATCCACAAACCCGCAAAACAACAACTCG-TATTACATAACCTTTTTAAGGTTACATAT-GA----G--GGAA-------GCCGAAAT----------------------ATGCAATTTTAACAAAG--TTCCATT--ATTTCCAGATGCTGTCGCAATCCCTGCTGAATGGCGTGCGCGTCCTGCGCACCGAGGCSizeHit CountTotal NormTotal
No Reads
droFic1
ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGAAAAACAAGGTGAAAATAA-CAGTTAAAATA-CAA---------T-----AATTTATTTT--TAA---------G--AG---------TATTGGCTGAGACATAGTGGGGCTAACAT-------TTAAAATCA-ATACCAT----------------ATCTCTCCAGAAAACCGCGAAAAAACAACTTG-CATTACATAACCTTTTTAAGGTTACATAT-GA----A--G-AT-------GCCAAAAT----------------------ATGCTATTTTAACACAA--TTCTATA--ATTTCTAGATGTTGTCGCAATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACCGAGGCSizeHit CountTotal NormTotal
No Reads
droKik1
ACAATTG---AGACTTTTCCGCACGA-----AAGTTTGCATTTGCCAAGGAAATTAAGGTAAAAATAG-GATTTGAAATG-GGA---------TT----TAAATACTTC--TTT---------G--AG---------AGTGAACTGACAACCTGCCGGGACTACTA-------GCAATATCA-GCTCCCG----------------GATACTCCAGGAATCACGGCAACAACAAATCG-TATTACATAACCTTTTTAAGGTTACATAT-GA----G--GGAA-------GCCGAAAT----------------------CCGCAATTCTAAATGTT---TTAATCCAAATTCCAGATGCTGTCGCAATCCCTGCTGAGTGGCATGCGTGTGCTGCGCACCGAGGCSizeHit CountTotal NormTotal
No Reads
droAna3
ACAATTG---ACTGTTTTCCGTGCGA-----AAGTTTGCAATTCCAAAGGAAATTAAGGTAAAAATAG-CATTATAAAGA-AGG---------TT----T-----------AAAAGGTCTTAATGGCAACCGAAAACT-GAAACAGAGACCCAG----------TA-------GGGACGACA-GCTTACG---------------AAAC-CGGCAGGAACCTCATAAATAACAAATCA-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--TAAC-------------------------------------CCGCGATTCTAATTGAT--TGTAATC--CTCTCCAGATGCTGTCGCAATCCCTGCTGACTGGCATGCGTGTGCTGCGCACCGAAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGACTGGC.......................2015.005050000
.............GTTTTCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................2215.005100013
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGTGCTGCGCACC.....2914.004310000
.................................GTTTGCAATTCCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................1814.004022000
....................................................................................................................................................................................................................................................................................................................................................................................GCTGACTGGCATGCGTGTGCT............2114.004400000
...............TTTCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................2014.004003001
....................................................................................................................................................................................................................................................................................................................................................................................GCTGACTGGCATGCGTGTGCTGCGCACC.....2813.003300000
................TTCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................1913.003000003
......G---ACTGTTTTCCGTGCGA-----AAGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................2513.003100002
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGTGC.............2113.003100002
.............GTTTTCCGTGCGA-----AAGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................2112.002002000
.........................A-----AAGTTTGCAATTCCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2212.002001001
................TTCCGTGCGA-----AAGTTTGCAATTCCAAAG....................................................................................................................................................................................................................................................................................................................................................................2812.002101000
....................................................................................................................................................................................................................................................................................................................................................................................GCTGACTGGCATGCGTGTGCTGCG.........2412.002100001
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGACTGGCAT.....................2012.002200000
...ATTG---ACTGTTTTCCGTGCGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2412.002000020
.................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGACTGGCATGCGTGTGCTGCG.........2712.002100001
...................................................................................................................................................................................................................................................................................................................................................GTAATC--CTCTCCAGATGCTGTCGCAAT.....................................2712.002000002
...ATTG---ACTGTTTTCCGTGC.............................................................................................................................................................................................................................................................................................................................................................................................1812.002020000
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGTGCT............2212.002200000
........................GA-----AAGTTTGCAATTCCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2312.002011000
...............................AAGTTTGCAATTCCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................GTTTGCAATTCCAAAGGAAATTAAG...........................................................................................................................................................................................................................................................................................................................................................2511.001000001
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGACTGGCATGCGTG................2311.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGCATGCGTGTGCTGCGCAC......2411.001010000
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGTGCTGCGCAC......2811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCTGCGCACCGA...1911.001100000
.........................A-----AAGTTTGCAATTCCAAAGG...................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....TG---ACTGTTTTCCGTGCGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGACT..........................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGACTGGCATGCGTG................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGCATGCGTGTGCTGCGCACCG....2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................CTGCTGACTGGCATGCGTGTGCT............2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................................GCATGCGTGTGCTGCGCACCG....2111.001100000
.............GTTTTCCGTGCGA-----AAGTTTGCAATT..........................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGACTGGCATGCGTGTGC.............2611.001000001
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGACTGGCATG....................2211.001100000
......G---ACTGTTTTCCGTGCGA-----AAGTTTGCAAT...........................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....TTG---ACTGTTTTCCGTGCGA-----......................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGACTGGC.......................1811.001010000
....TTG---ACTGTTTTCCGTGCGA-----AAGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...............TTTCCGTGCGA-----AAGTTTGCAATT..........................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCTGACTGGC.......................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGACTGGCATG....................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................ACTGGCATGCGTGTGCTGCG.........2011.001100000
...............TTTCCGTGCGA-----AAGTTTGCAA............................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................AGTTTGCAATTCCAAAGGAAATTAAG...........................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................AGTTTGCAATTCCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGACTGGCATGCGTGT...............2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGT...............1911.001000001
.................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGACTGGCATGCGTGTGCTGCGC........2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGACTGGCATGCGTGTGCC............2711.001010000
.................................GTTTGCAATTCCAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................AAGTTTGCAATTCCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGACTGGCA......................2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGCATGCGTGTGCTGC..........2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................CTGGCATGCGTGTGCTGCG.........1911.001100000
...............................AAGTTTGCAATTCCAAAGG...................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................TTCCGTGCGA-----AAGTTTGCAATTCC........................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................CTGGCATGCGTGTGCTGCGCACCGAA..2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGTGCTGC..........2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGACTGGCATGCG..................2711.001001000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCCCTGCTGACTG.........................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCCCTGCT..............................2111.001100000
.................TCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................1811.001000001
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTGGCATGCGTGTGCTGCG.........2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCTGACTGGCATGC...................2011.001010000
...............................AAGTTTGCAATTCCAAAGGAAAT...............................................................................................................................................................................................................................................................................................................................................................2311.001000001
....TTG---ACTGTTTTCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.........................A-----AAGTTTGCAATTCCAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...ATTG---ACTGTTTTCCGTGCGA-----AAGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................2811.001000010
..........................................................................................................................................................................................................................................................................................................................................ATTGAT--TGTAATC--CTCTCCAGA.................................................2211.001001000
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGACTGGCATGC...................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGCATGCGTGTGCT............2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCTGACTGGCATGCGTGTGCT............2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCCCTGCTGACTGGC.......................2211.001010000
......G---ACTGTTTTCCGTGCGA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCCCTGCTGACTGGCATGCGT.................2611.001100000
................TTCCGTGCGA-----AAGTTTGCAA............................................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCTGACTGGCA......................1911.001100000
........................GA-----AAGTTTGCAATTCCAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................TTCCGTGCGA-----AAGTTTGCAATT..........................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...........CTGTTTTCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......G---ACTGTTTTCCGTGCGA-----AAGTTTGCA.............................................................................................................................................................................................................................................................................................................................................................................2611.001000001
......................................................................................................................................AACT-GAAACAGAGACCCGC----------C................................................................................................................................................................................................................................................20130.081010000
droBip1
ACAATTG---ACTGTTTTCCGTGCGA-----AAGTTTGCATTTGCGAAGGAAATTAAGGTAAAAATAG-CTTTATAAATA-AAG---------TT----T-----------AAGGAGTTGGAAAGGAAAACAAAAACC-GAAACTAAGATCCTGTGGG-----------------GACGACA-GTTTTTA---------------AAACCGGCTGGACACCTCTTAAACAACAAATCA-TATTACATAACCTTTTTAAGGTTACATAT-GA----A--TAAC-------------------------------------CCGCGATTCTAATTGAC--TCTAATC--CTCTCCAGATGCTGTCGCAATCCCTGCTGAATGGCGTGCGTGTCCTGCGCACCGAAGCSizeHit CountTotal NormTotal
No Reads
dp5
TCAAT------CACTTTTCAACAAAA-----AAGTTTGCA-------ACGAATAAAAGGTAAAAACTA-TATAGAAACAA-TAT---------AG----AAAAGGATCTGGAAG---------G--AG-----------TGTGCTAAAGGACTTCGTGAACT----ATAACTAGCGAAA----GCTTTGG----------------ATAGCTTTTTGAATTAGCAAAACAACACCACA-TATTACATAACCTTTTTAAGGTTACATAG-GA----GAGGATA-------GCTGAAAT--------------------TCGCGCAATTCTAAGATAT---TCTATTT-ACCTGCAGATGCTGTCGCAATCAATTCTGACTGGTGTGCGTGTGCTCCGCACGGAGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGTGTGC.............25112.00120900001200
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGT.................2114.0040200001010
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGTGTG..............2413.0030300000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGTGTGCTC...........2713.0030300000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGTGT...............2313.0030300000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTGACTGGTGTGCGTGTGCTCC..........2312.0020101000000
............................................................................................................................................................................................................................................................................................................................................................................CAATCAATTCTGACTGGTGTGCG..................2312.0020100001000
............................................................................................................................................................................................................................................................................................................................................................................CAATCAATTCTGACTGGTGTGCGTG................2512.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGC...................1912.0020110000000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCCG.........2112.0020100001000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCAATTCTGACTGGTG......................2712.0020000000200
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTGTGCTCC..........2512.0020001000010
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCAATTCTGACTGGT.......................1912.0020110000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCAATTCTGACTGGTG......................2412.0020100000010
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTGTGCTC...........2412.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGACTGGTGTGCGTGTGCTCCGCAC......2812.0020010000001
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTG................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCAATTCTGACTGG........................2211.0010100000000
.......................................A-------ACGAATAAAAGGTAAAAACT..................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
...............................AAGTTTGCA-------ACGAATAAA.............................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTGCT............2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGACTGGTGTGCGTGTGCTCCGC........2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTGGTGTGCGTGTGCTCCGCA.......2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCAATTCTGACTGGTGTGCGT.................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGTGTGCGTGTGCTCCGCA.......2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTGCTCCGCAC......2611.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................ATCAATTCTGACTGGTGTG....................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGTGCGTGTGCTCCG.........2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCAATTCTGACTGG........................2711.0010100000000
................TTCAACAAAA-----AAGTTTGCA-------ACGAATA...............................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGTGTGCGTGTGCTC...........2011.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCTCCGCACGGAGGC2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTGCTCC..........2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGTGTGCGTGTGCTCCGCACGGAG..2511.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTGACTGGTGTGCGTGTGCTCCGCA.......2611.0010100000000
...............TTTCAACAAAA-----AAGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGT.................1811.0010001000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTCTGACTGGTGTGCGA.................2311.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGA.................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCTCCGCACGGAGGC2011.0010001000000
...............TTTCAACAAAA-----AAGTTTGCA-------AC....................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCCGCACG.....2511.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGTGTGCT............2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCTCCGCACGGAGG.1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCTCCGCACGGAGG.2111.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................TGTGCGTGTGCTCCGCACGGAGGC2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCAATTCTGACTG.........................2011.0011000000000
...........................................................................................................CTGGAAG---------G--AG-----------TGTGCTAAAG................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCAATTCTGACTGG........................2511.0010100000000
.......................AAA-----AAGTTTGCA-------ACGAATAAAAGA..........................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
................TTCAACAAAA-----AAGTTTGCA-------ACGA..................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTGTG..............2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCAATTCTGACTGGT.......................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................CAATTCTGACTGGTGTGCGTGTGCTC...........2611.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGACTGGTGTGCGTGTGCTCCGCA.......2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCG..................2011.0010100000000
.............CTTTTCAACAAAA-----AAGTTTGCA-------......................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGTGCGTGTGCTCC..........1911.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................TGCAGATGCTGTCGCAATCA...................................2011.0010100000000
..................CAACAAAA-----AAGTTTGCA-------ACGAATAAAAG...........................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCAATTCTGACTGGTGTGCGTGTGCT............2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGTGTGCGTGTGCTCCGCACA.....2611.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCAATTCTGACT..........................2311.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGACTGGTGTGCGTGTGCTC...........2511.0010100000000
..AAT------CACTTTTCAACAAAA-----AAGT..................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGACTGGTGTGCGTGTGCT............2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCAATTCTGACTGGT.......................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCCGCA.......2311.0010001000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCAATTCTGACTGGTGTGC...................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCCGCACGGA...2711.0010100000000
droPer2
TCAAT------CACTTTTCAACAAAA-----AAGTTTGCA-------ACGAATAAAAGGTAAAAACTA-TATAGAAAAAA-TAT---------AG----AAAAGGATCT--GGA---------A--GG---------TCTGTTCTAAATGACTTCGTGAACT----ATAACTAGCGAAA----GCTTTGG----------------ATATCTTTGTGAATTAGCAAAACAACACCACA-TATTACATAACCTTTTTAAGGTTACATTG-GA----GAGGATA-------GCTGAAAT--------------------TCGCGCAATTCTAAGATAT---TCTATTT-ACCTGCAGATGCTGTCGCAATCAATTCTGACTGGTGTGCGTGTGCTCCGCACGGAGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCAATTCTGACTGGT.......................20116.00161600000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCAATTCTGACTG.........................1818.008800000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCAATTCTGACTGGT.......................1917.007700000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCAATTCTGACTGGT.......................2216.006600000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGCAATCAATTCTGACT..........................2314.004310000
........................................................................................................................................................................................................................................................................................................................................................................GTCGCAATCAATTCTGACTG.........................2013.003120000
..............................................................................................................................................................................................................................................................................................................................................................................ATCAATTCTGACTGGTGT.....................1813.003300000
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCAATTCTGACTGGT.......................2413.003300000
..................CAACAAAA-----AAGTTTGCA-------ACGA..................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCCGC........2212.002000002
............................................................................................................................................................................................................................................................................................................................................................................CAATCAATTCTGACTGGT.......................1812.002200000
.........................................................................................................................................................TCGTGAACT----ATAACTAGC......................................................................................................................................................................................................................................1812.002200000
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGTGTGCGTGTGCTCC..........2112.002000002
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTCTGACTGGTGTGCGTGTG..............2412.002020000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTCTGACTGGTGTGCGTGT...............2512.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCC..........2012.002000002
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCAATTCTGACT..........................2112.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTGCT............2012.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTGCGTGTGCTCCG.........2112.002000002
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCAATTCTGACTGGC.......................2412.002200000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTCTGACTGGTGT.....................1912.002200000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTCTGACTGGTGG.....................1912.002200000
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTG................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTGCTC...........2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCAATTCTGACTGGTGTGC...................2411.001100000
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCAATTCTGACTGGT.......................2711.001100000
..................................................................................AT---------AG----AAAAGGATCT--GGA---------A--G......................................................................................................................................................................................................................................................................................1911.001001000
...................................................................................................................................................................................................................................................................GTTACATTG-GA----GAGGATA-------GCTGAA..............................................................................................................2411.001100000
.........................A-----AAGTTTGCA-------ACGAATAAAAG...........................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGTGTGCGTGTGCTCCGCACGGAA..2511.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGTGCTCCGCACGGAGGC2311.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTG..............1811.001000001
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTGTGCTCCGC........2711.001010000
.....................................................................................................................................................................................................................................................................TACATTG-GA----GAGGATA-------GCTGAA..............................................................................................................2211.001100000
......................................................................................................................................................................................................................................................................................................................................................................CTGTCGCAATCAATTCTGAC...........................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCAATTCTGACTGGT.......................2811.001001000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTCTGACTGGTGTGCGTGG...............2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGTGCTCCGCACGGAG..2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGACTGGTGTGCGTGTG..............2211.001000001
....................................................................................................................................................................................................................................................................................................................................................................................TCTGACTGGTGTGCGTGTGCT............2111.001000001
.....................................................................................................................................................................................................................................................................TACATTG-GA----GAGGATA-------GCTGAAAT--------------------TCG.....................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................................................................................................................TCGCAATCAATTCTGACTGGT.......................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................AGATGCTGTCGCAATCAATT................................2011.001000100
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGACTGGTGTGCGTGTGCTCC..........2511.001000001
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGACTGGTGTGCGTGTGCT............2411.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGTGTGCGTGTGCTCC..........2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGTGTGCGTGTGCTC...........2011.001000001
.......................................................................................................................................................................................................................................................................................................................................................................TGTCGCAATCAATTCTGACTGGTGTGCG..................2811.001010000
...............................................................................................................................................................................GAAA----GCTTTGG----------------ATATCTTTGTG............................................................................................................................................................................................2211.001001000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTCTGACTGGTGTGCG..................2211.001001000
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGCAATCAATTCTGACTGGG.......................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGTGTGCTCCGCA.......1811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................TGACTGGTGTGCGTGTGCT............1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................CGCAATCAATTCTGACTGGG.......................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................CAATTCTGACTGGTGTGCGTGTGCT............2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................TCTGACTGGTGTGCGTGTGCTCCGCAC......2711.001010000
................................................................................................................................................................................................................................................................................................................................................................................CAATTCTGACTGGTGTGCGTGTGT.............2411.001001000
droWil2
ACAATTGTTAACAATTTTCCATCCAAACA--GGATTTGCGTTTGCTAAGGAAAATAAGGTAAAAGCTGAGTAATAAAATTAAATGCTCTAAGATC----TAAATCATTT--AA----------TGGTG---------T-TGGACAGAGATATTGTATC-----------------CCAGACA-GTCTTTT----------CTGATTAAGTCATAGGCAAAAACATAAACCACAGCTGACAATTACATAACCTTTTTAAGGTTACAAAATAATTGGC--AAATGCC----GCAGAAATATAAAGAATTA-----------T---TAATA-AAGCGGG--CTTAATC--CTTTGCAGATGCTGACACAGACAATTCTGAATGGAGTGCGTGTGCTCCGCACTGAGGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................AACA--GGATTTGCGTTTGCTAAGGAA.................................................................................................................................................................................................................................................................................................................................................................25124.00240110130
.........................AACA--GGATTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................26122.0022006160
........................AAACA--GGATTTGCGTTTGCTAAGGAA.................................................................................................................................................................................................................................................................................................................................................................26111.001100560
........TAACAATTTTCCATCCAAACA--GGATT.................................................................................................................................................................................................................................................................................................................................................................................26111.0011011000
....................ATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2019.00901260
.........................AACA--GGATTTGCGTTTGCTAAGGA..................................................................................................................................................................................................................................................................................................................................................................2418.00800350
..............................................................................................................................................................................................................................................................................................................................................................................GACAATTCTGAATGGAGTGCGTGT...............2418.00800260
........................AAACA--GGATTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2718.00801250
............................................................................................................................................................................................................................................................................................................................................................................CAGACAATTCTGAATGGAGTGCGTGT...............2618.00810520
..................CCATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2216.00601221
........................AAACA--GGATTTGCGTTTGCTAAGGA..................................................................................................................................................................................................................................................................................................................................................................2516.00600510
.....................................................................................................................................................................................................................................................................................................................................................................................CTGAATGGAGTGCGTGTG..............1816.00600141
................TTCCATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2415.00500140
.............................................................................................................................................................................................................................................................................................................................................................................AGACAATTCTGAATGGAGTGCGTGT...............2514.00400130
............................A--GGATTTGCGTTTGCTAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2514.00404000
.........................AACA--GGATTTGCGTTTGCTAAGG...................................................................................................................................................................................................................................................................................................................................................................2314.00400130
........................AAACA--GGATTTGCGTTTGCTAAGG...................................................................................................................................................................................................................................................................................................................................................................2414.00400220
........................AAACA--GGATTTGCGTTTGC........................................................................................................................................................................................................................................................................................................................................................................1914.00400220
..............................................................................................................................................................................................................................................................................................................................................................................GACAATTCTGAATGGAGTGCGTGTG..............2514.00401120
.........................AACA--GGATTTGCGTTTGCT.......................................................................................................................................................................................................................................................................................................................................................................1914.00401030
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAATGGAGTGCGTGT...............2014.00400220
...........................CA--GGATTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2414.00400040
.........................AACA--GGATTTGCGTTTGCTA......................................................................................................................................................................................................................................................................................................................................................................2013.00300120
..........................ACA--GGATTTGCGTTTGCTAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2413.00302010
...........................................................................................................................................................................................................................................................................................................................................................................ACAGACAATTCTGAATGGAGTGCGTGT...............2713.00300030
..................................TTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................1913.00300030
.........................AACA--GGATTTGCGTTTGCTAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2712.00200020
................................GATTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2112.00200200
................................GATTTGCGTTTGCTAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2312.00201100
...........................CA--GGATTTGCGTTTGCTAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2312.00200110
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAATGGAGTGCGTGT...............2112.00200110
..........................ACA--GGATTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2512.00200200
............................................................................................................................................................................................................................................................................................................................................................................CAGACAATTCTGAATGGAGTGCGT.................2412.00200110
................................................................................................................................................................................................................................................................................................................................................................................CAATTCTGAATGGAGTGCGTGTG..............2312.00200110
.................TCCATCCAAACA--GGATTTGCGTTTGC........................................................................................................................................................................................................................................................................................................................................................................2612.00202000
...........................CA--GGATTTGCGTTTGCTAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2612.00210010
....................................................................................................................................................................................................................................................................................................................................................................TGCTGACACAGACAATTCTGAAT..........................2312.00202000
.........................AACA--GGATTTGCGTTTGCTAAG....................................................................................................................................................................................................................................................................................................................................................................2212.00210010
..........................ACA--GGATTTGCGTTTGCTAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2712.00200200
.....TGTTAACAATTTTCCATCCA............................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
...............TTTCCATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2512.00200110
..............................................................................................................................................................................................................................................................................................................................................................................GACAATTCTGAATGGAGTGCGT.................2212.00200200
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGAATGGAGTGCGTGTGCTCCGCA.......2712.00202000
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAATGGAGTGCGTGTGCTC...........2512.00200200
.........................AACA--GGATTTGCGTTTGCTAA.....................................................................................................................................................................................................................................................................................................................................................................2112.00200020
..............................................................................................................................................................................................................................................................................................................................................................................GACAATTCTGAATGGAGTGCGTGTGCTC...........2812.00200200
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGAATGGAGTGCGTGTG..............2012.00200110
...................................TTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................CACAGACAATTCTGAATGGAGTGCGTG................2711.00110000
................................GATTTGCGTTTGCTAAGGAAAATAAG...........................................................................................................................................................................................................................................................................................................................................................2611.00100100
.....................................................................................................................................................................................................................................................................................................................................ATA-AAGCGGG--CTTAATC--CTTTG.....................................................2211.00100001
.........................................................................................................................................................................................................................................................................................................................................................................ACACAGACAATTCTGAATGGAGTGCGT.................2711.00100010
........................AAACA--GGATTTGCGTTTGCTAA.....................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................CATCCAAACA--GGATTTGCGTTTGCTAAGGA..................................................................................................................................................................................................................................................................................................................................................................3011.00100100
..................CCATCCAAACA--GGATTTGCGTTTGC........................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.....................TCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............AATTTTCCATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAATGGAGTGCGTGTG..............2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................TGCTGACACAGACAATTCTGAATGGAG......................2711.00100010
.........................AACA--GGATTTGCGTTTGC........................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................ACACAGACAATTCTGAATGGAGTGC...................2511.00100010
...........................CA--GGATTTGCGTTTGCTAAGG...................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............TTTTCCATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2611.00101000
....................................................................................................................................................................................................................................................................................................................................................................TGCTGACACAGACAATTCTGAATGGA.......................2611.00110000
..................................TTTGCGTTTGCTAAGGAA.................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........................AAACA--GGATTTGCGTTTGCTAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2811.00100100
........................AAACA--GGATTTGCGTTTG.........................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................ACA--GGATTTGCGTTTGCTAAGGA..................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................CTGAATGGAGTGCGTGTGC.............1911.00100010
.......................CAAACA--GGATTTGCGTTT..........................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................ACAGACAATTCTGAATGGAGTGCGT.................2511.00100100
..........................................................................................................................................................................................................................................................................................................................................................................CACAGACAATTCTGAATGGAGTGCGT.................2611.00100100
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAATGGAGTGCGTGTGCTCCG.........2611.00100100
...ATTGTTAACAATTTTCCATCC.............................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGACACAGACAATTCTGA............................2311.00110000
...........................................................................................................TT--AA----------TGGTG---------T-TGGACAGAGATAT.............................................................................................................................................................................................................................................................2311.00101000
......................................CGTTTGCTAAGGAAAATA.............................................................................................................................................................................................................................................................................................................................................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................ATGCTGACACAGACAATTCTGAAT..........................2411.00110000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGAATGGAGTGCGTGTGCT............2211.00100100
........................................................................................................................................................................................................................................................................................................................................................................................AATGGAGTGCGTGTGCTC...........1811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAATGGAGTGCGTGTGCTCCGCA.......2811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................GACAATTCTGAATGGAGTGC...................2011.00100010
............................................................................................................T--AA----------TGGTG---------T-TGGACAGAGATATTGTA.........................................................................................................................................................................................................................................................2611.00100001
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAATGGAGTGCGTG................1911.00100010
.......................CAAACA--GGATTTGCGTTTGCTAA.....................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGAATGGAGTGCGTGTGCTC...........2311.00101000
........................................................................................................................................................................................................................................................................................................................................................................GACACAGACAATTCTGAATGGAGTGCGT.................2811.00100100
....................................................................................................................................................................................................................................................................................................................................................................TGCTGACACAGACAATTCTGAATGGG.......................2611.00110000
................TTCCATCCAAACA--GGATTTGC..............................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................A--GGATTTGCGTTTGCTAAGGA..................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....TTGTTAACAATTTTCCATCCA............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...................CATCCAAACA--GGATTTGCGC............................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAATGGAGTGCGTGTGCTC...........2411.00100010
......GTTAACAATTTTCCATCCAA...........................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................ATCCAAACA--GGATTTGCGT............................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.................................ATTTGCGTTTGCTAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................2211.00100010
...................CATCCAAACA--GGATTTGCGTT...........................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...............TTTCCATCCAAACA--GGATTTGCGT............................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................ACAGACAATTCTGAATGGAGTGC...................2311.00100010
..........................ACA--GGATTTGCGTTTGCTAA.....................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................TTCCATCCAAACA--GGATTTGCGT............................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..................CCATCCAAACA--GGATTTGCGT............................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................................ATTTGCGTTTGCTAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....TGTTAACAATTTTCCATCCAAACA--GGATT.................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
......................................................................................................................................................................................................................................................................................................................................................................CTGACACAGACAATTCTGAATGGAGTG....................2711.00100010
............................................................................................................................................................................................................................................................................................................................................................................CAGACAATTCTGAATGGAGT.....................2011.00100010
........................AAACA--GGATTTGCGTTTGCTAAG....................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................................................................................................................................................................................................................................................................................................................TGAATGGAGTGCGTGTGCT............1911.00100001
....................................................................................................................................................................................................................................................................................................................................................................................TCTGAATGGAGTGCGTGTGCTCCGCACT.....2811.00110000
.............................................................................................................................................................................................................................................................................................................................................................................AGACAATTCTGAATGGAGTGCGTGTGCTC...........2911.00100100
.............................................................................................................................................................................................................................................................................................................................................................................AGACAATTCTGAATGGAGTGCGTGTGCG............2811.00110000
........................AAACA--GGATTTGCGTTTGCT.......................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGAATGGAGTGCGTGT...............1911.00100010
....TTGTTAACAATTTTCCATCCAAACA--GGA...................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
....................ATCCAAACA--GGATTTGCGTTT..........................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................................................................................................................................................................GACAATTCTGAATGGAGTGCGTGC...............2411.00110000
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAATGGAGTGCGTGTGCT............2411.00100010
.............ATTTTCCATCCAAACA--GGAT..................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
.........................................................................................................................................................................................................................AAAAACATAAACCACAGCTGA.......................................................................................................................................................................2111.00100100
............................................................................................................................................................................................TT----------CTGATTAAGTCATAGGCAA..........................................................................................................................................................................................2111.00100100
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAATGGAGTGCGTGTG..............2211.00100010
...................................................................................................................................................................................................................................................................................................................................................................................TTCTGAATGGAGTGCGTG................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................AGACAATTCTGAATGGAGTG....................2011.00101000
................................................................................................................................................................................................................................................................................................................ATTA-----------T---TAATA-AAGCGGG--C..................................................................1811.00110000
droVir3
-CGGTTG---ACAATTTTCCCCACATACAGTACAGAGGCATTTGAAAAGGAAAATATGGTAATAAAAA-AAGAGTA-----------------------AAAATGATTT--GAAAAGTAAAAAAGTAAATAAGTAAAT-AATAATAA--------TAAACCACTTG-------GCATATGCAAACTTGTTAATACATATT-TTG-AAACTA-----TAAGCTCTGCAAATGCAAAATG-TATTACATAACCTT-TTAAGGTTACCGAA-TT----G--CTACCACAGAGGAAGATTA----------------------ACGCTATTTTATCG--------------TATTACAGATGCTGTCGCAATCAATTTTAACCGGCGTCCGTGTTCTACGCACTGAGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGCGTCCGTGTT..............1914.004001000000000002100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AACCGGCGTCCGTGTTCTACGCA.......2314.004000000000000000001010000000000000000000000000000000000000000110
.............................GTACAGAGGCATTTGAAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2413.003000000000000000102000000000000000000000000000000000000000000000
..................................GAGGCATTTGAAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................1813.003002000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ACCGGCGTCCGTGTTCTACGCA.......2212.002000000000000000001000010000000000000000000000000000000000000000
.........................TACAGTACAGAGGCATTTGAAAAG....................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................TAAAT-AATAATAA--------TAAACCACTTG-------GCAT....................................................................................................................................................................................................................................2812.002000000000000000000000000000002000000000000000000000000000000000
................................CAGAGGCATTTGAAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................2112.002000100000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CCGGCGTCCGTGTTCTACG.........1912.002001000000000000000000000000000000001000000000000000000000000000
.............ATTTTCCCCACATACAGTACAGAGGCA.............................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000002000000000000000000000000000000000000000000000
.........................TACAGTACAGAGGCATTTGAA.......................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001100000000000000000000000000000000000000000000
...................................AGGCATTTGAAAAGGAAA................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000100000000000000000000100000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CAATTTTAACCGGCGTCCGT.................2012.002000000000000000001000000000000010000000000000000000000000000000
.........................TACAGTACAGAGGCATTTG.........................................................................................................................................................................................................................................................................................................................................................................1912.002011000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCAAT.................................1812.002000000000000000000010000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCAATTTTAACCGGCG......................2012.002011000000000000000000000000000000000000000000000000000000000000
...............................ACAGAGGCATTTGAAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000001000000000000000000000000000000000000000000000
......G---ACAATTTTCCCCACATACA........................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................ATATGGTAATAAAAA-AAGAG...........................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................AGTACAGAGGCATTTGAAA......................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACCGGCGTCCGTGTTCTACG.........2311.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TAACCGGCGTCCGTGTTCTACGCACTGA...2811.001001000000000000000000000000000000000000000000000000000000000000
..................................GAGGCATTTGAAAAGGAAAATA.............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGCGTCCGTGTTC.............2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATTTTAACCGGCGTCCGTGTTCTACG.........2611.001001000000000000000000000000000000000000000000000000000000000000
...................................AGGCATTTGAAAAGGAAAATATG...........................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATTTTAACCGGCGTCCGTGTTCTACG.........2711.001001000000000000000000000000000000000000000000000000000000000000
............................AGTACAGAGGCATTTGAAAAGG...................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTTTAACCGGCGTCCGTGTTCT............2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTTTAACCGGCGTCCGTGTTCTACGCACT.....2911.001000000000000000000100000000000000000000000000000000000000000000
......................ACATACAGTACAGAGGCATT...........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..................................GAGGCATTTGAAAAGGAAAATATG...........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACCGGCGTCCGTGTTCT............2011.001000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TAACCGGCGTCCGTGTTCTACG.........2211.001000000000000000000000100000000000000000000000000000000000000000
.................TCCCCACATACAGTACAGAGGCATTT..........................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
...............................ACAGAGGCATTTGAAAAGG...................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................CACATACAGTACAGAGGCATT...........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.............................GTACAGAGGCATTTGAAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................GGCATTTGAAAAGGAAAATATG...........................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
....................CCACATACAGTACAGAGGCA.............................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGCAATCAATTTTAACCGGC.......................2811.001000100000000000000000000000000000000000000000000000000000000000
........................ATACAGTACAGAGGCATTT..........................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGCGTCCGTGTTCTACGCA.......2611.001000000000000000001000000000000000000000000000000000000000000000
................................CAGAGGCATTTGAAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
..........................ACAGTACAGAGGCATTTGAA.......................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
..................CCCCACATACAGTACAGAGGCATTTGA........................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATTTTAACCGGCGTCCGTGTTCT............2311.001000000000000000001000000000000000000000000000000000000000000000
...................CCCACATACAGTACAGAGGCAT............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
....................................GGCATTTGAAAAGGAAAATAT............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.....................CACATACAGTACAGAGGCA.............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
.........................TACAGTACAGAGGCATTTGAAAAGGA..................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
..............................TACAGAGGCATTTGAAAAGGAAAATAT............................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.............................GTACAGAGGCATTTGAAAAG....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............ATTTTCCCCACATACAGTACAGAG................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
................TTCCCCACATACAGTACAGAGGC..............................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGCGTCCGTGTTCTACG.........2411.001001000000000000000000000000000000000000000000000000000000000000
..................................GAGGCATTTGAAAAGGAAAA...............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGCGTCCGTGTTCTAC..........2311.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCAATTTTAACCGGCGTCCGTGTTC.............2511.001000000000000000000000000000010000000000000000000000000000000000
........................ATACAGTACAGAGGCATC...........................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.............ATTTTCCCCACATACAGTACAGAGGCAT............................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
..............................................AAGGAAAATATGGTAATAAAAA-A...............................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGGCGTCCGTGTTCTACGCACT.....2211.001000000000000000000100000000000000000000000000000000000000000000
..GGTTG---ACAATTTTCCCCAC.............................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GGCGTCCGTGTTCTACGCACTGA...2311.001000000000000000001000000000000000000000000000000000000000000000
...........................CAGTACAGAGGCATTTGAAAAGG...................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGCGTCCGTGTTCTA...........2211.001000000000000000001000000000000000000000000000000000000000000000
.............ATTTTCCCCACATACAGTAC....................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................GGCATTTGAAAAGGAAAAT..............................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.................TCCCCACATACAGTACAGAG................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AACCGGCGTCCGTGTTCTACGCACT.....2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................ATGGTAATAAAAA-AAGAG...........................................................................................................................................................................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
.....................CACATACAGTACAGAGGCATTTGAA.......................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCAATCAATTTTAACCGGCGTCCGT.................2511.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACCGGCGTCCGTGTT..............1811.001000000000000000100000000000000000000000000000000000000000000000
................TTCCCCACATACAGTACAGAGGCAT............................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
..................CCCCACATACAGTACAGAGGC..............................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...............TTTCCCCACATACAGTACAGAGGC..............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ACCGGCGTCCGTGTTCTACGCACT.....2411.001000000000000000000100000000000000000000000000000000000000000000
......................ACATACAGTACAGAGGCAT............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.................................AGAGGCATTTGAAAAGGAA.................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.............ATTTTCCCCACATACAGTACAGAGGC..............................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATTTTAACCGGCGTCCGT.................1911.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTTTAACCGGCGTCCGTG................1811.001001000000000000000000000000000000000000000000000000000000000000
.................TCCCCACATACAGTACAGAGGCAT............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................AACCGGCGTCCGTGTTCTACG.........2111.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACCGGCGTCCGTGTTCTAC..........2211.001000000000000001000000000000000000000000000000000000000000000000
.................TCCCCACATACAGTACAGAGGC..............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
................................CAGAGGCATTTGAAAAGGA..................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCAATTTTAACCGGCGTCCGT.................2311.001001000000000000000000000000000000000000000000000000000000000000
........................ATACAGTACAGAGGCATTTGA........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..........................ACAGTACAGAGGCATTTG.........................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
......................................CATTTGAAAAGGAAAATATG...........................................................................................................................................................................................................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
....................CCACATACAGTACAGAGGCATT...........................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000001000000000000000000000000
.................TCCCCACATACAGTACAGAGGCATT...........................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATTTTAACCGGCGTCCGTGTT..............2211.001000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TT-TTAAGGTTACCGAA-TT----G--CTA............................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGGCGTCCGTGTTCTACGCAC......2111.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CAATCAATTTTAACCGGCGTCCGT.................2411.001001000000000000000000000000000000000000000000000000000000000000
.CGGTTG---ACAATTTTCCCCACA............................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTTTAACCGGCGTCCGTGT...............1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................ATTTGAAAAGGAAAATATG...........................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
CA-----------ATTTTCCACATATATAGTACAATAGCATTTGAAAA-TAAAATAAGGTAAAGAAAA-AGCATTAAATA-AAC---------TG----T-----------GAA-------------G-----------CATATTAAACCAATACCAAGATT----TCACCTGGAGTAA----GATATTCATAACCTACG-------TCAGATCACCTAACGCTACATAAACAACATG-CATTACATAACCTT-TTAAGGTTACCAAA-TT----G--TTAG-------CACGA-------------------------------ATATACTTGAA--ATCTATTG-TTTTGTAGATGCTGTCGCAATCTATTTTAACCGGTATCCGTGTTCTGCGCACTGAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................ACCGGTATCCGTGTTCTGCGC........2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................TTTTAACCGGTATCCGTGTTCTGC..........2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................ACCGGTATCCGTGTTCTGCGCACT.....2411.001100000
....................................................................................................................................................................................................................................................................................................................................................................................TTTAACCGGTATCCGTGTTCTGCGCA.......2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................AACCGGTATCCGTGTTCTGCGCA.......2311.001100000
.......................TATATAGTACAATAGCATTTGAAAA-TAA.................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................CCGGTATCCGTGTTCTGCGCACTGA...2511.001001000
.......................TATATAGTACAATAGCATTTGAAAA-TA..................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................A-AAC---------TG----T-----------GAA-------------G-----------CATATTAAACC...............................................................................................................................................................................................................................................................2211.001100000
.A-----------ATTTTCCACATATATAGTACAATAGC..............................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACCGGTATCCGTGTTCTGC..........2211.001100000
..............................TACAATAGCATTTGAAAA-TAA.................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................CATATATAGTACAATAGC..............................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............ATTTTCCACATATATAGTACAATAGC..............................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................................TAACCGGTATCCGTGTTCTG...........2011.001100000
..........................ATAGTACAATAGCATTTGA........................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................AACCGGTATCCGTGTTCTGC..........2011.001100000
droGri2
ACAATTT---TCC-AAATTCGCACTT-----AAGG-AGCATTTCAAAAGGGAAATAAGGTAAAATTAT-GAACCAAAATT-AAC--TTTAAA-TTTGCCAAAATAATTG--AGG---------T--AC---------CAC--ACAAA---AAACCTAAAGTAACTA-------A-----ACC-GTTTTTA----------TTGA-CAACTA-----AAAGTGCTAGAAAAACAACATG-TATTACATAACCTT-TTAAGGTTACCAAA-AATT--G--TTACGCCGAA-GACAAAAC---AAGAATTGTGTTAAAATTACTAC-------------------AAT--TTTTACAGATGTTGACGCAATCAATTCTATCCGGCGTCCGTGTGCTGAGGACGGAGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................T-----AAGG-AGCATTTCAAAAGG...................................................................................................................................................................................................................................................................................................................................................................1911.00110
...............AATTCGCACTT-----AAGG-AGC..............................................................................................................................................................................................................................................................................................................................................................................1811.00110
...................................................................................................................................................................................................................................................................................................................................................................................TTCTATCCGGCGTCCGTGTGC.............2111.00110
.........................................................................................................................................................................................................................................................................................................................................................................................CCGGCGTCCGTGTGCTGAGGAC......2211.00110

Generated: 05/18/2015 at 09:23 AM