ID:

dsi_26133

 Coordinate:

3l:17795065-17795200 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1 -6.1 -6.0

Flybase annnotation

intron [3l_17795055_17795055_-]; exon [3l_17795055_17795055_-]; intron [3l_17795055_17795055_-]; exon [3l_17795055_17795055_-]; CDS [3l_17795055_17795055_-]; intron [3l_17795055_17795055_-]; exon [3l_17795055_17795055_-]; three_prime_UTR [3l_17795055_17795055_-]; CDS [3l_17795055_17795055_-]; CDS [3l_17795055_17795055_-]; CDS [3l_17795055_17795064_-]; exon [3l_17795055_17795064_-]; exon [3l_17795201_17795339_-]; CDS [3l_17795201_17795339_-]; intron [3l_17795064_17795200_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------##########----------------------------------------
AAGCGGTTGATTATATGCATGAACAAGGAGTCGTCCATCGTGATCTTAAGGTAAGACATTTTTATCTGATTTGTATCTTGTATGATCATTTGGCACTTATGAAAAGGAAATAGGAAAAAGAAATGTATAGGCAATGGATCTTTGAAATCTATATGGGTTAACGAAAGGTAATACATATTAGCCTCGCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTGATCTCAGA
*********************************************************************.....(((((((.....(((((....(((((.........)))))......))))).....)))..))))............************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR902009
testis
 SRR902008
ovaries
.......TGATTATATGCATGAACAAGGAGTCGTCC........................................................................................................................................................................................................ 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..........TTATATGCATGAACAAGGAGTCGTC......................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTGAAATTTGATCTCGGT 20 3 20 1.05 21 13 0 1 0 5 0 0 0 1 1
.....................................................................TTTGTATCTTGTATGATCATTTGGC.............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............TATGCATGAACAAGGAGTCGT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TGTATAGGCAATGGATCTTTGAAATCTA..................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................TGAACAAGGAGTCGTCCATCGTGATC............................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................GAACAAGGAGTCGTCCATC..................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................CAAGGAGTCGTCCATCGTGATCTT............................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................TAGGCAATGGATCTTTGAAATCTA..................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......TGATTATATGCATGAACAAGGAGTCGTC......................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................TGATCATTTGGCACTTATGAAAAGGA................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TATAGGCAATGGATCTTTGAAATCTA..................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......TTGATTATATGCATGAACAAGGAGTC............................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................GGAGTCGTCCATCGTGATC............................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................TCTTTGAAATCTATATGGGTTAACGAA....................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................TGTATAGGCAATGGATCTTTGAAATC....................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................TATCTGATTTGTATCTTGTATGATCA.................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................TGAACAAGGAGTCGTCCATCGTGATCTT............................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................ATGAACAAGGAGTCGTCCA....................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........TATATGCATGAACAAGGAGTCGTCC........................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............................................................................TTGTATGATCATTTGGCACTTATG....................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................TGGATCTTTGAAATCTATATGGGT.............................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........TATATGCATGAACAAGGAGTCGT.......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................CATCGTGATCTTAAGGTAAGACATT................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........TATATGCATGAACAAGGAGTCGTCCATC..................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTT.......................... 20 0 20 0.50 10 0 0 0 10 0 0 0 0 0 0
.....................................................AGCCTTTTTTGTCTGATTTGT.................................................................................................................................................................. 21 3 11 0.36 4 0 1 2 0 0 0 0 1 0 0
..........................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTAAATT.......... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TTAACGAAAGGGAATAC.............................................................. 17 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...............TGCATGAACGAGGAGT............................................................................................................................................................................................................. 16 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TTTTGAAATTTGATCTCGG. 19 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTAAATT.......... 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0
....................................ATCGTGAGGTTAAGGT........................................................................................................................................................................................ 16 2 20 0.15 3 0 0 0 0 3 0 0 0 0 0
..........................................................TTTTTGTCTGATTTGT.................................................................................................................................................................. 16 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0
...............................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTT..................... 24 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................................................................TTTTTTGTTTTTTTTTTTTTTTAAAATT......... 28 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................TTTTTTGTTTTTTTTTTTTTTTAAAATT.......... 28 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................TTCTTTTTTTTTTTTTTGTTTTTAAA............ 26 2 19 0.05 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................TTGGCACTGATGAAAAAAAAA.............................................................................................................................. 21 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................CTTTTGAAATTTGATCTCGG. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTT....................... 23 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................TTTGAAATTTGATCTCGGT 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCGCCTGTTCTGTTTATTTTT................................ 21 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TTCGCCAACTAATATACGTACTTGTTCCTCAGCAGGTAGCACTAGAATTCCATTCTGTAAAAATAGACTAAACATAGAACATACTAGTAAACCGTGAATACTTTTCCTTTATCCTTTTTCTTTACATATCCGTTACCTAGAAACTTTAGATATACCCAATTGCTTTCCATTATGTATAATCGGAGCGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAACTAGAGTCT
*************************************************************************************.....(((((((.....(((((....(((((.........)))))......))))).....)))..))))............********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR902008
ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 M025
embryo
 M024
male body
...........................................................................AGAACATACTAGTAAACCGTGAATACTT..................................................................................................................................... 28 0 1 39.00 39 23 14 0 0 1 1 0 0 0 0 0 0
.................................AGGTAGCACTAGAATTCCATTCTGT.................................................................................................................................................................................. 25 0 1 12.00 12 3 5 0 0 2 2 0 0 0 0 0 0
................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAA......................... 19 0 20 6.90 138 0 0 0 130 0 0 0 8 0 0 0 0
................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA................... 25 0 20 3.30 66 0 0 0 0 0 0 53 0 0 0 13 0
...........................................................................AGAACATACTAGTAAACCGT............................................................................................................................................. 20 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................AGATATACCCAATTGCTTTCCAT.................................................................. 23 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA................. 27 0 20 2.50 50 0 0 3 47 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA................ 26 0 20 2.35 47 0 0 0 47 0 0 0 0 0 0 0 0
...........................................................................AGAACATACTAGTAAACCGTGAATAC....................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAATTTTACTAGAGT.. 36 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................GTTCCTCAGCAGGTAGCACTAGAAT............................................................................................................................................................................................ 25 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0
...........................................................................AGAACATACTAGTAAACCGTGAAT......................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................AGGTAGCACTAGAATTCCATTCTGTA................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................AGAACATACTAGTAAACCGTGAATACT...................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTAGATATACCCAATTGCTTTCCAT.................................................................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................AGAATTCCATTCTGTAAAAATAGACT....................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................ACTTGTTCCTCAGCAGGTAGCACT................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA..................... 21 0 20 1.60 32 0 0 0 0 0 0 0 21 11 0 0 0
.........................TCCTCAGCAGGTAGCACTAGAATTCCATT...................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................AGACTAAACATAGAACATACTAGT.................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................TCCTCAGCAGGTAGCACTAGAATTCCA........................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTGCTTTCCATTATGT............................................................. 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................AGCTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 36 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCCGACAAAAGAAAAAAAAAAAAAAAAAAAAAAAA................. 35 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGATATACCCAATTGCTTTCCATTAT............................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................ACCCAATTGCTTTCCATTATGTATAAT........................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 36 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATACCCAATTGCTTTCCATTAGGT............................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................ACTTGTTCCTCAGCAGGTAGCACTAGA.............................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................AGAACATACTAGTAAACCGTGAATACTG..................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CCGCGGACACAAAAAAAAAAAAAAAAAAAAAAAAA................... 35 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................TGTTCCTCAGCAGGTAGCACTAGAAT............................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGATATACCCAATTGCTTTCCATTA................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGATATACCCAATTGCTTTCCATTATGT............................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CCAATTGCTTTCCATTATGTATAATCGG..................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................GCCGACAAACAAAAAAAAAAAAAAAAAAAAAAAAA................. 35 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................AGAACATACTAGTAAACCGTGAATACTTT.................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATACCCAATTGCTTTCCATTATGT............................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................AAAAATAGACTAAACATAGAACATACT....................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................CCCATTCTGTAAAAATAGACTAAACAT................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................TCCATTCTGTAAAAATAGACTAAACAT................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAGAAGAAAAAATCTAA.......... 36 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................AGAACATACTAGTAAACCGTGAATACTTTT................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CCAATTGCTTTCCATTATG.............................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................ACATACTAGTAAACCGTGAATACTT..................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.TCGCCAACTCATATTCGT......................................................................................................................................................................................................................... 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTACATATCCGTTACCTAGAAACTT.......................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................AGGTAGCACTAGAATTCCATTCTGTAA................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA................. 25 0 20 0.85 17 0 0 0 0 0 0 0 17 0 0 0 0
.................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA.................. 25 0 20 0.60 12 0 0 0 0 0 0 0 0 12 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............... 33 0 7 0.57 4 0 0 4 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AAAAAAAAAAATTTAAACT....... 19 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGAGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 36 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 36 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................TCCTTTTCCTTTCCCCTTTTTCTTT................................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAAAAATTTAG.......... 36 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCGACACAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 35 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GAGCACACAAAAAAAAAAAAAAAAAAAAAAAAAAAA.................. 36 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............... 35 1 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAAAAAAAAATTTAGGCTAGAG... 22 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................AAAAAAAAAATGTCACCTAGAGT.. 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCGGCCATGAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 36 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AAGCAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAA.................. 36 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 32 0 7 0.29 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA.................. 28 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 5 0
........................................................................................................................................................................................ACCGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 36 2 8 0.25 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AACAAAAAAAAAAAAAAAAAAAAATTAAAACT....... 32 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................TAAAAAAAGACTAAACATA................................................................................................................................................................ 19 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................TGTTAAAATAAACTAAACATA................................................................................................................................................................ 21 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................GCAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 36 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGACAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA............... 35 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAAAAAAAAAAAA....................... 25 0 20 0.15 3 0 0 1 0 0 0 0 1 0 0 1 0
.......................................................................................................................................................................................AACCGACAAAAACAAAAAAAAAAAAAAAAAAAAAAA................. 36 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAATTTA........... 24 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................AGAGCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA................... 36 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGCGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 35 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAACAAAAAAAAACAAAAAAAAA............... 33 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 35 2 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCCGAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAA................ 36 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAAGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 36 2 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA............... 33 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA............... 33 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAATAAAAAAAAAAAAAAAAAAAA............... 33 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA............... 33 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGCGCGCACAAAAAAAAAAAAAAAAAAAAAAAAA................... 34 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAACAAAAAAACAAAAAAAAA............... 33 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGATACTTAA.......... 36 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AGCGCGCACAAAAAAAAAAAAAAAAAAAAAAAAA..................... 34 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ACCGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 35 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA............... 33 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ACCGACAAAAAACAAAAAAAAAAAAAAAAAAAAAAA................ 36 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GACGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 35 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAACAAAAAAAAAAAAAATAAAAAAAAA................. 31 2 19 0.11 2 0 0 0 0 0 0 2 0 0 0 0 0
......................................................................................................................................................................................ATGCAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAA.................. 36 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAAAAAAA................... 28 0 20 0.10 2 0 0 0 0 0 0 1 1 0 0 0 0
.......................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAATT............. 24 0 20 0.10 2 0 0 0 0 0 0 1 0 1 0 0 0
.......................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAATTT............ 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAACAAAAAAAAAAAAAAAAAAAAAAAAAA................ 32 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACACAAAAAAAAAAAAAAAAAAAAAAAAAATAACT............. 35 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................. 36 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAAAAAAAAAAAGATTTAGACT....... 22 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAAATCAAAACAAAAAAAAAA............... 33 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............... 35 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAACAAAAAAAAAAAAAAAAAAAACAAAAAAAAAA............... 35 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAACAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA............... 35 2 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAAAAAAAAAAAAAAATTTA........... 21 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................AAAAAAAAAAAAAAAAAATTTCAA......... 24 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................AAAAAAAAAAAAAGGGAAACTAGA.... 24 3 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAATTT............ 36 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAACTTT............ 28 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............... 32 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAAAAAAAAAAAAAAAATTT............ 21 0 19 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAAAAAAAAAAAAAAATAAACTTTA........... 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............... 36 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAAAAAAAAAAAAAAATTT............ 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA................ 25 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAAAA...................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAATTTAATAT....... 30 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AAAAAAAAAAGATTTAGACT....... 20 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAA........................ 23 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAAA....................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA................ 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAAAAAAAAAAAAAAAATAAATTTAT.......... 26 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAAAAAAAAAAAAAA..................... 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAACAAAAAAAAAAGAAAAAAAAAAAAAAAAA............... 32 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAA...................... 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAAAAAAAAAAAATAGAAAAAAGTTT............ 26 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAAT....... 36 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.TCGCCAACTCATATTC........................................................................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAA.......................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACGAAAAAAAAAAAAAAAAAAAAAAAAAAA.................. 30 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAAAAGAAAAA................ 31 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAATT............. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AAAAAAAAAAAAATTTTAA......... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA............... 36 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAAAAAAAAAAAAAAATAAAAAATAAATT............. 29 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAGAAAA.................. 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAT............ 36 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAAAAAAAACAAAAAGAAAATTTA........... 24 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAT.............. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:17795015-17795250 - dsi_26133 AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAGGAGTCGTCCATCGTGATCTTAAGGTAAGACATTTTT----------A-T-----------------------------------CTGATTTGTATCTTGTATGATCATT--------------------------TGGCACT----------------------------------------TATGAAAAGGAAA-T------------AG--------GAAAAA----------------------------------GAAATGTA------------------------------TAGGC----------AATGGATCTTTGAAATCTATA---T----GGGTTAACGAAAGGTAA------------------------TACA----------------TATTAGCCTCGCCTGT-----------TTTTTTTTT----------T--TTTTTTTTT---T----TTTTT---------T---------TTTTAAATTTGATCTCAGA
droSec2 scaffold_30:201306-201501 + AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAGGAGTCGTCCATCGTGATCTTAAGGTAAGACATTTTT----------A-T-----------------------------------CTGATTTGTATCTTGTATGATCATT--------------------------TGGCACT----------------------------------------TAGGAAAGGGAAA-T------------AG--------GAAAAA----------------------------------GAAATGTA------------------------------TAGGC----------AATGGATCTTTGAAATCTATA---T----GGGTTAACGAAAGGTAA------------------------TACA----------------TATTAGCCTCGCCTGT-------------------------------------------------------------------------------TTTTT---------
dm3 chr4:471086-471275 + AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAGGTGTCGTCCATCGTGATCTTAAGGTAAGACAATTTT----------A-T-----------------------------------CTGATTTATATCTTCAATGATCATT--------------------------TGGCACT----------------------------------------TAGGAAAGGAAAA-T-----------------------------AGA------------------------------TTAATGT------------------------------ATAGGC----------AACGGATCTTTGAAATCTATA---T----GGGTTAACGAAATGTAA------------------------TACA----------------TAT-AGGCTCGCCTGC-------------------------------------------------------------------------------TTTTT---------
droEre2 scaffold_4512:819699-819898 - AAGCGGTTGATT---------ATATG--------------------------------CATGAGCAAGGTGTCGTCCATCGTGATCTTAAGGTAAGACAATGTT----------A-T-----------------------------------TTGATTTTTGTCTTGAATGATCAT------------------------AATTGTCACG----------------------------------------TAGAA--GAA------------------------------AAATATA------------------------------TATATGT------------------------------ATAGGC----------AGCGGATCTCTAAGCTATATA---A----GGTTTAACAAAAAGTAA------------------------TAGA----------------TATCAGCCTCTCCA------------------------------------------AGGC-A----A-----------------------TTTTTTCTTT---------
droYak3 4:520584-520751 + AAGCGGTTGATT---------ATATG--------------------------------CATGAGCAAGGTGTAGTTCATCGTGATCTTAAGGTAATACAATTTT----------G-T-----------------------------------CTGATTTATATCTTGAAT----------------------------------------------------------------------------------------------------------------------------ATA------------------------------TAGATGT------------------------------ATAGGC----------AACGGATCTCTGAAATGTATA---A----CGTTTAACGAAAAGTAA------------------------TATA----------------TATCAGCCACGCGGTT--------------------------------------------------------------------------TTTTGTCTTT---------
droEug1 scf7180000405129:742-901 - TATAATTGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACAGC----------------------------------------TTTAGAGAGGAAG-T------------GG--------CAAAAA----------------------------------GAGGTGCC------AG-------C-------------ATAGGTAGACTTGG---GCGAAACTTTA-------CC---AAAATGACTTTCCATAAAGCAA----------------------------------------------CTGAGCTTGGCCGTTTTATTTTTATTTTTATTTT----------A--TTTT-------TTATTTTTTTT---------T---------GGTTTAACTT---------
droBia1 scf7180000301495:293434-293597 + AAAAGAAGT--------------------------------------------------------------------------------AG-----GT------AAAACAAGTTA-TGTGTAAGCAGCTTACTTTTGAAAAGCTAGCTAGTT----------------------------------------------------------------------------------------------------------------TGGCGAG----AA--AACAGCTA--GA-------------------------------------------A-ATAGCTA-------CATTT-----------------------------------TGTACAGTAGCACT------ACTTA----------------------AAA------------------------------TTATTGCCAAA--AGT-----------TTTTTATCT----------A--TTTT-------TTTTTCATCTT---------T---------TTTCCGATTT---------
droTak1 scf7180000412213:18099-18238 + AAAAGGTATT--------------------------------------------------------------------------------------GG--------------------------------------------------------------------------------------GCAA------AAATAAATAC-----C-----TAGGTAAGGTAAAGGTACTTTAATTTCCCAGTACCTAGGTAAAGGTAT-A------------AG--------GTAAAT----------------------------------ATATTGTA------------------------------T----------------------------------------------------------------------------------------------------------------------TT-------------------TTTTTTTTTTTATAAT----TTT---T----TTGTT---------T---------TGTTCAATTTAAACTTAAA
droEle1 scf7180000490994:970277-970396 - AAAAAGAA-----------------A--------------------------------CATTTTCGAGTTGGTTTTCAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATATATT-TT------CCCCG----AAGCTCC------------------TAATTAGCCA----------------A--------AGCCGGT-----------TCTTTCGGTGTTT------------TTTTTT---T----TTGTT---------TTCTTTATTTCGGCTGCTGT---------
droRho1 scf7180000778960:1720-1862 - TTAAGCTA--------------------------------------------------------------------------------------AAGCG-TTTT----------A-T-----------------------------------CTGATTTT------------------------GTTTATTAAAAAGTAAAGAT----------------------------------------------------------C-T----AGTATGCA-------------AAA----------------------------------AAAGTGAA------------------------------AAGAT----------AACGTGTTCCTTTAC-----------------CCA-----A-------------------------------TA----------------TTTCAGCCATGAGTGT-----------TAATTTTTT----------T--CTTTCTTCT---T----TTTCT---------T---------TGCTGA---A---------
droFic1 scf7180000453495:37906-38006 - AAAAACGAAT--------------------------------------------------------------------------------------GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA----------------CAATATAT--GT-------------------------------------------A-TTACATA-------TA-------------TATAGATACATAAGTAATG--------------------------------------------------------------------CT----------------T---------ACCC---------------------TCTTT----------TTT--TAAGT-A----ATTTT---------T---------TTTTAAATTAGACTTTAGA
droKik1 scf7180000301921:14370-14513 - TATAATTTTTTC---------CTATG--------------------------------AAAACG-------------------AATTTTGAATAA-------------------------------------------------------------------------------------------------------------------------------CAAAAGATT-------------------------------------------------------------------------------------------------------A-TTATTTT-------TTGCT-----------------------------------TTATTTTTTGT-TT------ATTTG----------------------ACCAAATAAA---AATA----------------TTTTGACCTCGAACAA-----------TTTTTTTTT----------A--TTTT-------TTTACGTTTTT---------T---------TTTTATATTGGGT------
droAna3 scaffold_5269:617-777 - TTTTTATTTTTT---------ATTTCA-------------------------------CTTGAACGATATGTT----------------------------------------------------------------------------------------------------------------------------------TAACAAG----------------------------------------TTTAAAAAA------------------------AT--TTTTTG----------------------------------GAAACGGA-----GAAAAAA-------AGAAATTTAA-ATATT----------TTCTCTTTCTTTTTT-----------------TTA--ATAATGTAG------------------------TCAC----------------TACAGACCTAGCGAAT-------------------C-TTTTTTTTTG--TTTT-------TT----------------------------TTTCTTTTTT---------
droBip1 scf7180000396469:6064-6285 + TCTTATACTAAGCCTTTTTTGATTTGAGGTGCATTGAAAATTGAGATTATTTTTTATAAATAAAT------------------------AG-----AT------AGTACAATAAAGCAGGTAAATAGATCGACCTTCTTGTATAAGCAAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAT----------AAAAAATCTTTATAAAATGTA---A----TACTTTGTAAATGTAAA------------------------TACC----------------TACAAACCTTAAAACG---------------------TTTTT----T--TTTT-------------TTTTT---------TAATTTA---TGTTAAATGAGATATCTAC
dp5 Unknown_group_8:11841-11997 + TTTTAGCTTATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGGCTT---------------------A----------------------------------------TTTTAAAACCAAA-TAGCTT----GAA--AAATATTT--GA-------------------------------------------A-ATGCTTA-------TAGCT-----------------------------------TGAAATCTAGC-TT------ATTTA----------------------AAACAATTAGTACAACA----------------AAATTT------CTGT-----------TTTTTTTTT----------A--TTTT-------TTTTGTAATTT---------T---------TGTTAATTTT---------
droPer2 scaffold_106:20563-20711 - TTTTAGCTTATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGGCTT---------------------A----------------------------------------TTTTAAAACCAAA-TAGCTT----GAA--AAATATTT--GA-------------------------------------------A-ATGCTTA-------TAGCT-----------------------------------TGAAATCTAGC-TT------ATTTA----------------------AAACAATTAGTACAACA----------------AAATTT------CTGT-------------------TTTTTTTTTTTA--TTTT-------TT----------------------------TTGTAATTTT---------
droWil2 scf2_1100000004963:3257651-3257804 + ATATATTTATGT----------------------------------------------------------------------AAATTTGATTTAATATAATTGT----------T-T-----------------------------------GTA-----------------------------------------------------------------------------------------------------------A-TAGCTAG----TA--GACAATTT--AA-ATATA------------------------------TATATTT-----------------A-------------TTTAA---------------ATATACGAATTATATT---A----ATTTTAATTATTAATAT------------------------TAT-----------------------CTCCGC---------------TTTTTGT-T-TTTTTTTTTG--TTTT-------CT----------------------------TTCTTTTTTT---------
droVir3 scaffold_12970:3847488-3847672 - TTTTTGTTTGTT---------TTTTT--------------------------------TTTT-------------------------------------------------------------------------------------------------------TGGAGGGTGGTT--------------------------TGTTTCTTATGA-----------------------------------AAA----GGAAAACA----AGAAAACA-----------------AAA------------------------------TTGATGC------------------------------AAAAAA----------AACGCGCTTTTAGATTTTTTA---A----GG-TTAATTTTTTA-ACTATCTTTTACT-----TTGGGTTCGCCT------TGTTGTTGT----------------------------TCGTTTCTT----------C--AGTT-------TTCAGGTGTTT---------T---------GTTTAAAGTT---------
droMoj3 scaffold_5446:3543-3752 - AAGAAATCGTT-------------------------------------------------------------ATTAAATCGTGAACTTTAAGTGAAAAAGTTTT----------T-T-----------------------------------GCCATTCATAATTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTGAACTACTCATTTTTGAAGATTTTGAGGAAATATTCCATTTGGGAAAAATTTT--------------TCAGCC----------GATTC---------GTTTAAG---T----GGATTAAAAGTGGGCTA------------------------TAATTATGATAAGCACTGTACATTA----TTCCAAA-------------------T-TTTTT----T--TTTT-----------------T---------T---------TTTTTTTTTT---------
droGri2 scaffold_15245:11371073-11371225 + TTTAACGTGATC--------------------------------------------------------------------------TACACTTTGTACCACAAT----------G------------------------------------------------------------TTATATTTATTTG---------------------A----------------------------------------TATTGATTCC-AA-TATATT----CAG--AAACAT--CTAAAA----------------------------------TAAACGTA-----TAGTAAA------------------TAA--------------------------------------------TTAACTA-----AA------------------------TATA----------------TAT----------------------------TTATT----------T--TTCTTTTCT---T----TTATTTTATTCAATT---------TTTTAAGTTT---------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAGGAGTCGTCCATCGTGATCTTAAGGTAAGACATTTTT----------A-T-----------------------------------CTGATTTGTATCTTGTATGATCATT--------------------------TGGCACT----------------------------------------TATGAAAAGGAAA-T------------AG--------GAAAAA----------------------------------GAAATGTA------------------------------TAGGC----------AATGGATCTTTGAAATCTATA---T----GGGTTAACGAAAGGTAA------------------------TACA----------------TATTAGCCTCGCCTGT-----------TTTTTTTTT----------T--TTTTTTTTT---T----TTTTT---------T---------TTTTAAATTTGATCTCAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......TGATT---------ATATG--------------------------------CATGAACAAGGAGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000011000000000
..........TT---------ATATG--------------------------------CATGAACAAGGAGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000011000000000
............................................................................................................................................................TTTGTATCTTGTATGATCATT--------------------------TGGC....................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
......................TATG--------------------------------CATGAACAAGGAGTCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................TGTA------------------------------TAGGC----------AATGGATCTTTGAAATCTA....................................................................................................................................................................................2811.00100000001000000000
............................................................TGAACAAGGAGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............................................................GAACAAGGAGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
................................................................CAAGGAGTCGTCCATCGTGATCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAGGC----------AATGGATCTTTGAAATCTA....................................................................................................................................................................................2411.00100000010000000000
.......TGATT---------ATATG--------------------------------CATGAACAAGGAGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.........................................................................................................................................................................TGATCATT--------------------------TGGCACT----------------------------------------TATGAAAAGGA..............................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................................TA------------------------------TAGGC----------AATGGATCTTTGAAATCTA....................................................................................................................................................................................2611.00100000001000000000
......TTGATT---------ATATG--------------------------------CATGAACAAGGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...................................................................GGAGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGAAATCTATA---T----GGGTTAACGAA...............................................................................................................................................................2711.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................TGTA------------------------------TAGGC----------AATGGATCTTTGAAATC......................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................T----------A-T-----------------------------------CTGATTTGTATCTTGTATGATCA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
............................................................TGAACAAGGAGTCGTCCATCGTGATCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...........................................................ATGAACAAGGAGTCGTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
...........T---------ATATG--------------------------------CATGAACAAGGAGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
....................................................................................................................................................................TTGTATGATCATT--------------------------TGGCACT----------------------------------------TATG.....................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGGATCTTTGAAATCTATA---T----GGGT......................................................................................................................................................................2411.00100000001000000000
...........T---------ATATG--------------------------------CATGAACAAGGAGTCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
............................................................................CATCGTGATCTTAAGGTAAGACATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...........T---------ATATG--------------------------------CATGAACAAGGAGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------TTTTTTTTT----------T--TTTTTTTTT---................................................20200.5010100000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTT---T----TTTTT---------T---------TTTTAAATT..........2430.33100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTT----------T--TTTTTTTTT---T----TTTT.......................................24200.10200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------TTTTTTTTT----------T--TTTTTTTTT---T----TT.........................................23200.05100010000000000000
droSec2
AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAGGAGTCGTCCATCGTGATCTTAAGGTAAGACATTTTT----------A-T-----------------------------------CTGATTTGTATCTTGTATGATCATT--------------------------TGGCACT----------------------------------------TAGGAAAGGGAAA-T------------AG--------GAAAAA----------------------------------GAAATGTA------------------------------TAGGC----------AATGGATCTTTGAAATCTATA---T----GGGTTAACGAAAGGTAA------------------------TACA----------------TATTAGCCTCGCCTGT-------------------------------------------------------------------------------TTTTT---------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................ATATG--------------------------------CATGAACAAGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
.................................................................AAGGAGTCGTCCATCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
........................TG--------------------------------CATGAACAAGGAGTCGTCCATCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
dm3
AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAGGTGTCGTCCATCGTGATCTTAAGGTAAGACAATTTT----------A-T-----------------------------------CTGATTTATATCTTCAATGATCATT--------------------------TGGCACT----------------------------------------TAGGAAAGGAAAA-T-----------------------------AGA------------------------------TTAATGT------------------------------ATAGGC----------AACGGATCTTTGAAATCTATA---T----GGGTTAACGAAATGTAA------------------------TACA----------------TAT-AGGCTCGCCTGC-------------------------------------------------------------------------------TTTTT---------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24116.00160000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000100000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000500000
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAAGGTGTCGTCCATCGTGATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATATG--------------------------------CATGAACAAGGTGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......TGATT---------ATATG--------------------------------CATGAACAAGGTGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......TGATT---------ATATG--------------------------------CATGAACAAGGTGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000200000
..........TT---------ATATG--------------------------------CATGAACAAGGTGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000
.......TGATT---------ATATG--------------------------------CATGAACAAGGTGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
........GATT---------ATATG--------------------------------CATGAACAAGGTGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
.................................................................AAGGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................AAGGTGTCGTCCATCGTGATCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATATG--------------------------------CATGAACAAGGTGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATT---------ATATG--------------------------------CATGAACAAGGTGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTCCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......................TATG--------------------------------CATGAACAAGGTGTCGTCCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................ATG--------------------------------CATGAACAAGGTGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................ATG--------------------------------CATGAACAAGGTGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AATGATCATT--------------------------TGGCACT----------------------------------------TAGG.....................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TATG--------------------------------CATGAACAAGGTGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACAAGGTGTCGTCCATCGTGATCTTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....GTTGATT---------ATATG--------------------------------CATGAACAAGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAATCTATA---T----GGGTTA....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CATGAACAAGGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCGTCCATCGTGATCTTAAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TATCTTCAATGATCATT--------------------------TGG.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........TT---------ATATG--------------------------------CATGAACAAGGTGTCGTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......TGATT---------ATATG--------------------------------CATGAACAAGGTGTCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACAAGGTGTCGTCCATCGTGATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGATT---------ATATG--------------------------------CATGAACAAGGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.AGCGGTTGATT---------ATATG--------------------------------CAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................AACAAGGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAGGC----------AACGGATCTTTGAAATCTAAT---C----..........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCGGTTGATT---------ATATG--------------------------------CATGAACAAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AAGGTGTCGTCCATCGTGATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................ATG--------------------------------CATGAACAAGGTGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TATG--------------------------------CATGAACAAGGTGTCGTCCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACAAGGTGTCGTCCATCGTGATCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACAAGGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........T---------ATATG--------------------------------CATGAACAAGGTGTCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................AAGGTGTCGTCCATCGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGCGGTTGATT---------ATATG--------------------------------CATGAACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AGGTGTCGTCCATCGTGATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGAACAAGGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TT---------ATATG--------------------------------CATGAACAAGGTGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................ATCGTGATCTTAAGGTAAGACAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAATGT------------------------------ATAGGC----------AACGGATCTTTGAAA........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CAAGGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................CGTGATCTTAAGGTAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CAAGGTGTCGTCCATCGTGATCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GGTGTCGTCCATCGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AGGTGTCGTCCATCGTGATCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................T-----------------------------AGA------------------------------TTAATGT------------------------------ATAGGC----------AACGGATCT..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TG--------------------------------CATGAACAAGGTGTCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAATGT------------------------------ATAGGC----------AACGGATCTTTGAA.........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ATATCTTCAATGATCATT--------------------------TGG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGAACAAGGTGTCGTCCATCGTGATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATATG--------------------------------CATGAACAAGGTGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGTTGATT---------ATATG--------------------------------CATGAACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................T-----------------------------AGA------------------------------TTAATGT------------------------------ATAGGC----------AACGGA.................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......TGATT---------ATATG--------------------------------CATGAACAAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTGATT---------ATATG--------------------------------CATGAACAAGGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................TGAACAAGGTGTCGTCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................G--------------------------------CATGAACAAGGTGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TG--------------------------------CATGAACAAGGTGTCGTCCATCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CAAGGTGTCGTCCATCGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................................................................AAGGTGTCGTCCATCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CATGAACAAGGTGTCGTCCATCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................ATGAACAAGGTGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................AACAAGGTGTCGTCCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................AACAAGGTGTCGTCCATCGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................ATGAACAAGGTGTCGTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AGGTGTCGTCCATCGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................ACAAGGTGTCGTCCATCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TG--------------------------------CATGAACAAGGTGTCGTCCATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................TG--------------------------------CATGAACAAGGTGTCGTCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................AACAAGGTGTCGTCCATCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................................TGTCGTCCATCGTGATCTTAAGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TG--------------------------------CATGAACAAGGTGTCGTCCATCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
AAGCGGTTGATT---------ATATG--------------------------------CATGAGCAAGGTGTCGTCCATCGTGATCTTAAGGTAAGACAATGTT----------A-T-----------------------------------TTGATTTTTGTCTTGAATGATCAT------------------------AATTGTCACG----------------------------------------TAGAA--GAA------------------------------AAATATA------------------------------TATATGT------------------------------ATAGGC----------AGCGGATCTCTAAGCTATATA---A----GGTTTAACAAAAAGTAA------------------------TAGA----------------TATCAGCCTCTCCA------------------------------------------AGGC-A----A-----------------------TTTTTTCTTT---------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....GGTTGATT---------ATATG--------------------------------CATGAGCAAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000007
....GGTTGATT---------ATATG--------------------------------CATGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
droYak3
AAGCGGTTGATT---------ATATG--------------------------------CATGAGCAAGGTGTAGTTCATCGTGATCTTAAGGTAATACAATTTT----------G-T-----------------------------------CTGATTTATATCTTGAAT----------------------------------------------------------------------------------------------------------------------------ATA------------------------------TAGATGT------------------------------ATAGGC----------AACGGATCTCTGAAATGTATA---A----CGTTTAACGAAAAGTAA------------------------TATA----------------TATCAGCCACGCGGTT--------------------------------------------------------------------------TTTTGTCTTT---------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........GATT---------ATATG--------------------------------CATGAGCAAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........TT---------ATATG--------------------------------CATGAGCAAGGTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
TATAATTGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACAGC----------------------------------------TTTAGAGAGGAAG-T------------GG--------CAAAAA----------------------------------GAGGTGCC------AG-------C-------------ATAGGTAGACTTGG---GCGAAACTTTA-------CC---AAAATGACTTTCCATAAAGCAA----------------------------------------------CTGAGCTTGGCCGTTTTATTTTTATTTTTATTTT----------A--TTTT-------TTATTTTTTTT---------T---------GGTTTAACTT---------SizeHit CountTotal NormTotal
No Reads
droBia1
AAAAGAAGT--------------------------------------------------------------------------------AG-----GT------AAAACAAGTTA-TGTGTAAGCAGCTTACTTTTGAAAAGCTAGCTAGTT----------------------------------------------------------------------------------------------------------------TGGCGAG----AA--AACAGCTA--GA-------------------------------------------A-ATAGCTA-------CATTT-----------------------------------TGTACAGTAGCACT------ACTTA----------------------AAA------------------------------TTATTGCCAAA--AGT-----------TTTTTATCT----------A--TTTT-------TTTTTCATCTT---------T---------TTTCCGATTT---------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAAGGTATT--------------------------------------------------------------------------------------GG--------------------------------------------------------------------------------------GCAA------AAATAAATAC-----C-----TAGGTAAGGTAAAGGTACTTTAATTTCCCAGTACCTAGGTAAAGGTAT-A------------AG--------GTAAAT----------------------------------ATATTGTA------------------------------T----------------------------------------------------------------------------------------------------------------------TT-------------------TTTTTTTTTTTATAAT----TTT---T----TTGTT---------T---------TGTTCAATTTAAACTTAAASizeHit CountTotal NormTotal
No Reads
droEle1
AAAAAGAA-----------------A--------------------------------CATTTTCGAGTTGGTTTTCAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATATATT-TT------CCCCG----AAGCTCC------------------TAATTAGCCA----------------A--------AGCCGGT-----------TCTTTCGGTGTTT------------TTTTTT---T----TTGTT---------TTCTTTATTTCGGCTGCTGT---------SizeHit CountTotal NormTotal
No Reads
droRho1
TTAAGCTA--------------------------------------------------------------------------------------AAGCG-TTTT----------A-T-----------------------------------CTGATTTT------------------------GTTTATTAAAAAGTAAAGAT----------------------------------------------------------C-T----AGTATGCA-------------AAA----------------------------------AAAGTGAA------------------------------AAGAT----------AACGTGTTCCTTTAC-----------------CCA-----A-------------------------------TA----------------TTTCAGCCATGAGTGT-----------TAATTTTTT----------T--CTTTCTTCT---T----TTTCT---------T---------TGCTGA---A---------SizeHit CountTotal NormTotal
No Reads
droFic1
AAAAACGAAT--------------------------------------------------------------------------------------GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA----------------CAATATAT--GT-------------------------------------------A-TTACATA-------TA-------------TATAGATACATAAGTAATG--------------------------------------------------------------------CT----------------T---------ACCC---------------------TCTTT----------TTT--TAAGT-A----ATTTT---------T---------TTTTAAATTAGACTTTAGASizeHit CountTotal NormTotal
No Reads
droKik1
TATAATTTTTTC---------CTATG--------------------------------AAAACG-------------------AATTTTGAATAA-------------------------------------------------------------------------------------------------------------------------------CAAAAGATT-------------------------------------------------------------------------------------------------------A-TTATTTT-------TTGCT-----------------------------------TTATTTTTTGT-TT------ATTTG----------------------ACCAAATAAA---AATA----------------TTTTGACCTCGAACAA-----------TTTTTTTTT----------A--TTTT-------TTTACGTTTTT---------T---------TTTTATATTGGGT------SizeHit CountTotal NormTotal
No Reads
droAna3
TTTTTATTTTTT---------ATTTCA-------------------------------CTTGAACGATATGTT----------------------------------------------------------------------------------------------------------------------------------TAACAAG----------------------------------------TTTAAAAAA------------------------AT--TTTTTG----------------------------------GAAACGGA-----GAAAAAA-------AGAAATTTAA-ATATT----------TTCTCTTTCTTTTTT-----------------TTA--ATAATGTAG------------------------TCAC----------------TACAGACCTAGCGAAT-------------------C-TTTTTTTTTG--TTTT-------TT----------------------------TTTCTTTTTT---------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................TTCA-------------------------------CTTGAACGATATGTT----------------------------------------------------------------------------------------------------------------------------------TAACAAG----------------------------------------.........................................................................................................................................................................................................................................................................................................................................2640.251010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAG------------------------TCAC----------------TACAGACCTAGCGAAT-------------------C-TT......................................................................28140.071100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTAG------------------------TCAC----------------TACAGACCTAGCGAA..............................................................................................26140.071100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TA--ATAATGTAG------------------------TCAC----------------TACAGACCTAG..................................................................................................26140.071100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------------------------TCAC----------------TACAGACCTAGCGAAT-------------------C-TTT.....................................................................27200.051100000
droBip1
TCTTATACTAAGCCTTTTTTGATTTGAGGTGCATTGAAAATTGAGATTATTTTTTATAAATAAAT------------------------AG-----AT------AGTACAATAAAGCAGGTAAATAGATCGACCTTCTTGTATAAGCAAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAT----------AAAAAATCTTTATAAAATGTA---A----TACTTTGTAAATGTAAA------------------------TACC----------------TACAAACCTTAAAACG---------------------TTTTT----T--TTTT-------------TTTTT---------TAATTTA---TGTTAAATGAGATATCTACSizeHit CountTotal NormTotal
No Reads
dp5
TTTTAGCTTATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGGCTT---------------------A----------------------------------------TTTTAAAACCAAA-TAGCTT----GAA--AAATATTT--GA-------------------------------------------A-ATGCTTA-------TAGCT-----------------------------------TGAAATCTAGC-TT------ATTTA----------------------AAACAATTAGTACAACA----------------AAATTT------CTGT-----------TTTTTTTTT----------A--TTTT-------TTTTGTAATTT---------T---------TGTTAATTTT---------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TAGCTTATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGG..........................................................................................................................................................................................................................................................................................................................................................................................................2441.5060000000060
........................................................................................................................................................................................................................................................................TAGCTT----GAA--AAATATTT--GA-------------------------------------------A-ATGCT..............................................................................................................................................................................................................................................2511.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTACAACA----------------AAATTT------CTGT-----------TTTTTTT...........................................................................2811.0010000000010
droPer2
TTTTAGCTTATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGGCTT---------------------A----------------------------------------TTTTAAAACCAAA-TAGCTT----GAA--AAATATTT--GA-------------------------------------------A-ATGCTTA-------TAGCT-----------------------------------TGAAATCTAGC-TT------ATTTA----------------------AAACAATTAGTACAACA----------------AAATTT------CTGT-------------------TTTTTTTTTTTA--TTTT-------TT----------------------------TTGTAATTTT---------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........TT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGGCTT---------------------A----------------------------------------.........................................................................................................................................................................................................................................................................................................................................2170.141010000
.........ATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGGCTT---------------------..................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
.......TTATT---------TTAAG--------------------------------CTAGA----------------------------------------------------------------------------------------------------------------TT-----TGG..........................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
droWil2
ATATATTTATGT----------------------------------------------------------------------AAATTTGATTTAATATAATTGT----------T-T-----------------------------------GTA-----------------------------------------------------------------------------------------------------------A-TAGCTAG----TA--GACAATTT--AA-ATATA------------------------------TATATTT-----------------A-------------TTTAA---------------ATATACGAATTATATT---A----ATTTTAATTATTAATAT------------------------TAT-----------------------CTCCGC---------------TTTTTGT-T-TTTTTTTTTG--TTTT-------CT----------------------------TTCTTTTTTT---------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTTTTGTTTGTT---------TTTTT--------------------------------TTTT-------------------------------------------------------------------------------------------------------TGGAGGGTGGTT--------------------------TGTTTCTTATGA-----------------------------------AAA----GGAAAACA----AGAAAACA-----------------AAA------------------------------TTGATGC------------------------------AAAAAA----------AACGCGCTTTTAGATTTTTTA---A----GG-TTAATTTTTTA-ACTATCTTTTACT-----TTGGGTTCGCCT------TGTTGTTGT----------------------------TCGTTTCTT----------C--AGTT-------TTCAGGTGTTT---------T---------GTTTAAAGTT---------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-ACTATCTTTTACT-----TTGGG....................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCT------TGTTGTTGT----------------------------TCGTTTCTT----------...............................................................2111.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTACT-----TTGGGTTCGCCT------.......................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGT----------------------------TCGTTTCTT----------C--AG..........................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------C--AGTT-------TTCAGGTGTTT---------T---------GTTTAAAGT..........2711.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGT----------------------------TCGTTTCTT----------C--AGTT-------.................................................2111.001000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAACA----AGAAAACA-----------------AAA------------------------------TTGAT.......................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
......................TTTT--------------------------------TTTT-------------------------------------------------------------------------------------------------------TGGAGGGTGGTT--------------------------........................................................................................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------TCGTTTCTT----------C--AGTT-------TTCAGG...........................................2111.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTCGCCT------TGTTGTTGT----------------------------T.................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
AAGAAATCGTT-------------------------------------------------------------ATTAAATCGTGAACTTTAAGTGAAAAAGTTTT----------T-T-----------------------------------GCCATTCATAATTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTGAACTACTCATTTTTGAAGATTTTGAGGAAATATTCCATTTGGGAAAAATTTT--------------TCAGCC----------GATTC---------GTTTAAG---T----GGATTAAAAGTGGGCTA------------------------TAATTATGATAAGCACTGTACATTA----TTCCAAA-------------------T-TTTTT----T--TTTT-----------------T---------T---------TTTTTTTTTT---------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................TTGAAGATTTTGAGGAAATATTCCA....................................................................................................................................................................................................................................................25200.204300001
......................................................................................................................................................................................................................................................................................................................TTGAAGATTTTGAGGAAATATTCCAT...................................................................................................................................................................................................................................................26200.102000002
................................................................................................................................................................TAATTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTGAACTACTCATT..............................................................................................................................................................................................................................................................................25200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................TC---------GTTTAAG---T----GGATTAAAAGTGGGC...........................................................................................................................................................25200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTAAG---T----GGATTAAAAGTGGGCTA------------------------TA...............................................................................................................................26200.051100000
...............................................................................................................................................................................................................................................................................................................................TTGAGGAAATATTCCATTTGGGAAAAATT.......................................................................................................................................................................................................................................29200.051100000
.......................................................................................................T----------T-T-----------------------------------GCCATTCATAATTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTGAA.......................................................................................................................................................................................................................................................................................27200.051000010
......................................................................................TTTAAGTGAAAAAGTTTT----------T-T-----------------------------------GCCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
.....................................................................................................TTT----------T-T-----------------------------------GCCATTCATAATTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTGA........................................................................................................................................................................................................................................................................................28200.051100000
.......................................................................................................................................................................................................................................................................................................................TGAAGATTTTGAGGAAATATTCCAT...................................................................................................................................................................................................................................................25200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGCTA------------------------TAATTATGATAAGCAC.................................................................................................................25200.051100000
......................................................................................................TT----------T-T-----------------------------------GCCATTCATAATTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTG.........................................................................................................................................................................................................................................................................................26200.051100000
...................................................................................................................................................................TTGAAAT----------------------------------------------------------------------------------------------------------------------------ATTGAACTACTCATTTTT...........................................................................................................................................................................................................................................................................25200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................TTAAG---T----GGATTAAAAGTGGGCTA------------------------TAATT............................................................................................................................28200.051100000
........................................................................................................................................................................................................................................................................................................................GAAGATTTTGAGGAAATATTCCATT..................................................................................................................................................................................................................................................25200.051100000
......................................................................................................................................................................................................................................................................................................................TTGAAGATTTTGAGGAAA...........................................................................................................................................................................................................................................................18200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................TTAAG---T----GGATTAAAAGTGGGCTA------------------------TAA..............................................................................................................................26200.051100000
......................................................................................................................................................................................................................................................................................................................TTGAAGATTTTGAGGAAATATTCCATTT.................................................................................................................................................................................................................................................28200.051000001
droGri2
TTTAACGTGATC--------------------------------------------------------------------------TACACTTTGTACCACAAT----------G------------------------------------------------------------TTATATTTATTTG---------------------A----------------------------------------TATTGATTCC-AA-TATATT----CAG--AAACAT--CTAAAA----------------------------------TAAACGTA-----TAGTAAA------------------TAA--------------------------------------------TTAACTA-----AA------------------------TATA----------------TAT----------------------------TTATT----------T--TTCTTTTCT---T----TTATTTTATTCAATT---------TTTTAAGTTT---------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:03 PM