ID:

dsi_26127

 Coordinate:

3l:2154732-2154881 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.1 -13.0 -13.0

Flybase annnotation

exon [3l_2154882_2155172_-]; five_prime_UTR [3l_2154882_2155172_-]; intron [3l_2153602_2154881_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAATATTCCAAACAAAACACATTATTGGACTACTGATTCATATCAAATCTGTAAGTTTATCTCTTTGTATTTCAGCCACGTCTTAAAATGTAGTTAACAAACAGTTATAATTTGGTTGTGGCTTTCCATTAATACAATATCCAACAAGTGGTTTTCCTACAGTTGTGTGTGCCCGAAAGTTTGTTTGCATGTGTGTTTCGGCGTTTACTGTTTTGAGCTTCCAACGGAAAGCTCGTGGAAATGCTCAATG
***************************************************************.(((((((..(((((((..(((((.(((((((....)))...)))).))))).))))))).......))))))).........******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M053
female body
 O002
Head
 SRR618934
dsim w501 ovaries
..............AAACACATTATTGGACTACTG....................................................................................................................................................................................................................... 21 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TACTGTTTTGAGCTCCCGACCG....................... 22 3 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
.........AAACAAAACACATTATTGGACTACTG....................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...............AACACATTATTGGACTACTG....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................AGGTCTGTAAGTTTATCTCTT......................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTTTTGAGCTTCCAGCGGAAG.................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTTTACTGTTTTGAGCTTCCA........................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................TTTGTATTTCAGCCACGTCT....................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................TTTATCTCTTTGTATTTCAGC.............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.........AAACAAAACACATTATTGGACT........................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CATTAATACAATATCCAACA........................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.....................TTATTGGACTACTGATTCATA................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............CAAAACACATTATTGGACTACTGA...................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........AACAAAACACATTATTGGACT........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........AAACAAAACACATTATTGGACC........................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTTCAGCCACGTCGTAAAAA................................................................................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................TTTTGAGCTTCCAACGGAAAG................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGTACTTTACAAACAGTTATA............................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........AGCAAAACACATTGTTGGACT........................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CATGTGTGTTTCGGCGTTTAC.......................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............AAACGCATTATTGGACTACTG....................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTTCAGCCACGTCGTAAA................................................................................................................................................................... 18 1 6 0.33 2 0 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGGAAAGCTCTGGGAAGTGC...... 20 3 9 0.33 3 0 0 0 0 0 0 3 0 0 0 0 0
.............................................................................................................................................................................................................TACTGTTTTGAGCTCCC............................ 17 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGTTTTGAGCTCCCGACCG....................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................TTTCAGCCACGTCGTAA.................................................................................................................................................................... 17 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................TACGGATTCATTTCCAATCT........................................................................................................................................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................GACAGTTGAGTGTGCCC............................................................................ 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1
........................TTGAACTACTGATTC................................................................................................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................ATTTCAGCCACGTCGTAATTT................................................................................................................................................................. 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................................AAAGCTCGTGGGTATG....... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTTATAAGGTTTGTTTTGTGTAATAACCTGATGACTAAGTATAGTTTAGACATTCAAATAGAGAAACATAAAGTCGGTGCAGAATTTTACATCAATTGTTTGTCAATATTAAACCAACACCGAAAGGTAATTATGTTATAGGTTGTTCACCAAAAGGATGTCAACACACACGGGCTTTCAAACAAACGTACACACAAAGCCGCAAATGACAAAACTCGAAGGTTGCCTTTCGAGCACCTTTACGAGTTAC
********************************************************************************************************.(((((((..(((((((..(((((.(((((((....)))...)))).))))).))))))).......))))))).........*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O001
Testis
 O002
Head
 M053
female body
 SRR902008
ovaries
.....................................................................................................GTCAAGATTCAACCAACA................................................................................................................................... 18 2 7 3.43 24 20 0 0 0 0 0 4 0 0 0 0 0
..............................................................AAAACATAAAGTCGGTGCAGGGTT.................................................................................................................................................................... 24 3 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0
.....................................................................................................GTCAAGATTCAACCAAC.................................................................................................................................... 17 2 15 2.73 41 30 4 0 0 0 0 7 0 0 0 0 0
...............................................................................................................................................................GTCAACACACACGGGCTT......................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...ATAAGGTTTGTTTTGTGTAAT.................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................ACCTGATGACTAAGTATAGTT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........TTGTTTTGTGTAATAACCTGA........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................ACATGGAGTCGGTGCAGAATT.................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................ACCTGATGACTAAGTATAGTTT........................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GATGTCAACACACACGGGCTT......................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.TTATAAGGTTTGTTTTGTGTA.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............TTGTGTAATAACCTGATGACT...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................AATAACCTGATGACTAAGT.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................TCAAATAGAGAAACATAAAGT................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................ACCAAAAGGATGTCAACACACACG.............................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................GGTAATTATGTTATAGGT........................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................ATTCAAATAGAGAAACATAAAGTCGGT............................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................AGAAACATGGAGTCGGTGCAG........................................................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................CTCCGAAAGGTAATTTT.................................................................................................................... 17 2 20 0.55 11 0 0 0 0 11 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AAAACTCCACGGTTGCCTT..................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TCAAGATTCAACCAACA................................................................................................................................... 17 2 20 0.35 7 0 6 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................CTCCGAAAGGTAATT...................................................................................................................... 15 1 19 0.21 4 0 0 0 0 4 0 0 0 0 0 0 0
.......................AAACCTGATGACTAACTAAAGT............................................................................................................................................................................................................. 22 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................AGAAACTTAAAGTCGG............................................................................................................................................................................. 16 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
................................GACCAAGTGTGGTTTAGAC....................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................ACACAGACGGGCTATCAA..................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AAAAAACGAAGGTTGCATTT.................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................GCAGATAACAAAACTCAAAG............................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................CACAGACGGGCTATCAA..................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................TCAAGATTCAACCAAC.................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:2154682-2154931 - dsi_26127 AAA-----------------TA--------TTCCAAAC-AAAACA-CATTATTGGA----------------CTACTGATTCAT-ATCAAA------------TCTGTAAGTTTATC-T--------CTTTGTAT-T-TCAGCCACGTCTTAAAAT--------------------GTAGTTA-AC-----------------AAACAGTTATAATT--TGGTTG-TGGCTTTCCATTAATACAATATCCAACAAGTGGTTT-TCCTACAG------------------------------TTGTGT--------GTG-CCC---------------GAAAGTTTGTTT---GCATGTGTGTTT----CGGCGTTTACT---GTTT----TGAGCTTCCAAC---GGAAAGCTCGT-GGAA-AT------G-C-----------------------------TCAATG
droSec2 scaffold_2:2282488-2282731 - AAA-----------------TA--------TTCCAAAC-AAAACA-CATTATTGGA----------------CTACTGATTCAT-TTCAAA------------TCTGTAAGTTTATC-T--------GTTTGTAT-T-TCAGCCACGTCTTAAATT--------------------GTAATTA-AC-----------------AAACAGTTATAATT--TGGT-------TTTCCATTAATACAATATCCAACAAGTGGTTT-TCCTACAG------------------------------TTGTGT--------GTG-CCC---------------GAAAGTTTGTTT---GCATGTGTGTTT----CGGCGTTTTCT---GTTT----TGAGCTTCCAAC---GGAAAGCTCGT-GGAA-AT------G-C-----------------------------CCAATG
dm3 chr3L:2256912-2257161 - AAA-----------------TA--------TTCCAAAC-AAAACA-CATTATTGGA----------------TTACTGATTCAT-TTCAAA------------TCTGTAAGTTTACC-T--------GTTTCTAT-T-TCAACTACGTCTTTAAAT--------------------GTAGTTT-AC-----------------AAACAGTTATAATT--TGGTTG-TGGCTTTCCATTAATATAATATCCAACAAGTGGTTT-TTCTACAG------------------------------TGGTGT--------GAG-CCC---------------GAAAGTTTGTTT---GCATGTGTGCTT----CGGCGTTTACA---GTTC----TGAGCTTCCAAC---GAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATG
droEre2 scaffold_4784:2266718-2266973 - ATA-----------------TA--------TTCCAAACTAAAACA-CATTGTTGGA----------------CTTCTGATTCAG-TTCAAA------------TCTGTAAGTTTACC-TATGTATGTATTTGTAT-C-TAAGCCACGTCTGTAATTATAT----------------GTAGTAA-AC-----------------AAACAGTTCGAATT--TGTTTG-CGGCTTTGCATTA-----ATATCCAACAAGTGGTTT-TCCTACAG------------------------------TAGTGT--------GTG-AC-----------------GAAGTTTGTTT---GCATGTGTGCTT----CGGTTTTTACA---GTTC----TGTGCTTCCAAC---GGAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATG
droYak3 3L:9682633-9682871 + AAA-----------------TA--------TTCCAAACT-AAAAA-CATTATTGGA----------------CTACTAATTTAT-TTAAAA------------TCGGTAAGTTTAGT-T--------CTTTCTAA-T-TCAGCCACGTTGTTGTAG--------------------ATAGTTA-AC-----------------AAATAG------TT--TGGTTG-CGGCTTTCCATTA-----ATATCCAACAAGTGGTTT-TCCTATAG------------------------------TGGTGT--------GTG-GCT---------------GTAAGTTTGTTT---GCATGTGTGCTT----CGGTTTTTACA---GTTC----TGAGCTTCCAAC---GAAAAGCTCGT-GGAA-AA------G-C-----------------------------CAAATG
droEug1 scf7180000409091:11751-11995 + AAT-----------------TA--------TTCCAAATT-AATAA-AAGTATTTGA----------------CGACGCATTTAA-ATAATT------------TCTGTAAGTAAAAC-A--------TTTTA-AG-T-TAACCTAGTTCTTTTAAA--------------------ACCTTCA-AC-----------------AAATAAATAGAACT--CTGTTG-CGGCTTTTCATTA-----ATATCCAACAAGTGGTTT-TC-TGTAG------------------------------TGGTGTAT------GTG-TTT---------------GAAAGTTTGTTT---GCATGTGTGTTT----TGGTTTTTACC---GTTC----TGAGCTTCCAGC---CAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAGATG
droBia1 scf7180000302428:8992201-8992444 - AAT-----------------TATTATTATATTCCAAATT-AAATA-G---ATTGGA----------------CTAGCGACTAAA-ATACAA------------ACTGTAAGTTGCCC-T--------CTTTG----C-TTAGCCACGTTTTAGAAC--------------------T--CTT--AA-----------------AAATAAGTAGAACT--TGGTGG-CGGCTTTTCTCTA-----ATATCCAACAAGTGGTTA-GAGTGTAG------------------------------TGGTGT--------GTG-TTT---------------GGAAGTTTGTCT---GCATGTGTGTTT----TTGTTTTTACC---GTTC----TGAGCTTCCCATG--GAAAAGCTCGT-GGAA-AT------G-G-----------------------------C-ATTG
droTak1 scf7180000414400:237683-237949 - AAT-----------------AG----AAAATTCCAAATT-AAATT----AATTGGA----------------CTACTGATTATA-ACAAGA------------ATTGTAAGTTGAAC-T--------CTTTA-TT-T-TTAGCCACGTCTTAGAAA--------------------ACTCTTT-AT-----------------AAATTATTAGAACT--TGGTGG-CGGCTTTTCTTTT-----ACACTCAACAAGTGGTTC-ACCTGTAG------------------------TTGTAGTGGTGT--------GTATTTT---------------GAAAGTTGGCCT---GCATGTGTATTG--TTTTGTTTTTACC---GTTTTTATCGAGCTTCCAACGGGGAAAAGCTCGT-GGAA-ATGGAAATG-T-----------------------------CAAATG
droEle1 scf7180000491249:3210413-3210668 + AAC-----------------TA--------TTCCAAATTAAAATA-AATAATTGGA----------------TTGTAAACTAAA-ATCGAA------------TCTGTAAGTTCATC-T--------CTTTGTTT-T-TAAGCCACGTCTTTAAGA--------------------GTAGTTA-AC-----------------AAATAAATAGAACTTTTGGTTG-CGGCTTTTTATTA-----ATATCCAACAAGTGGTTTATAATTTAG------------------------------TGGTGTGCGTGTGTGTG-TTG---------------GAAAGTTTGTTT---CCATGCTTCTTA----CGGT-TTTACC---ATTC----TGAGCTTCCAAT---GAAAAGCTCAT-GAAA-AT------G-C-----------------------------CAAATG
droRho1 scf7180000779532:19451-19693 + AAT-----------------TC--------TTTCAAATT-AAATA-AATTTTTGGA----------------CT-------TAC-ACCGAA------------TCTGTAAGTTTAAT-C---------ACTGTTT-T-TTAACCGCATCTTTAAAA--------------------GTAGTTA-GA-----------------AAGTAAATATAACT--TGGTGG-CGGCCTTTCATTA-----ATATCCAACAGGTGGTTT-TTCTGTAG------------------------------TGGTGTGTTTGT--GGG-CTT---------------GAATGTTTGTTT---GCATGTGTGTTA----GTGGTTCCACC---GTTC----TGAGCTTTCAAG---GAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATG
droFic1 scf7180000453052:799049-799303 + AAT-----------------TA--------TTCCAAATT-AAATATAATTATT----------------------------CAA-ATAAAAACTTGAGTATACTTGGTAAGTTTATATT--ACATA-TTTTGTAT-T-TAAGCCACGTCTGTAAAC--------------------GTAGTTA-AC-----------------AAATAAATAGAATC--CGGTAG-CGGCTTTTCATTA-----ATATCCAACAAGTGGTTT-TTCT-TAG------------------------------TAGTGTGCGT----GTG-TTT---------------GAAAGTTTGTTT---GCATGAGTGTTT--GT-GTTTAGTTCC---GTTC----TGTGCTTCCA-G---GAAAAGCTCGT-GGAA-AA------G-C-----------------------------CAAATG
droKik1 scf7180000302441:1536839-1537126 + AAGGCGCGTGTCTAATTGGATA--------TCCGCA-----------ATTACTGGA----------------T-ATTAATTAAATATACAA------------ACTGTAAGTAGAAA-C--------TATTACAT-T-TTAGCCACGTTTCTGAAT--------------------GTAGTTG-GT-----------------AAACAAATACAACT--AGGTTT-CGGCTTTTCATTA-----ATATCTAACAAGTGGTTG-TAGTT-CTCGCTCTCTATCTCTCTCTCTATCTCTGCGATTGTATGTATGTATGCA-TTT---------------GAAAGTTTGTTGTGTACATGAGTGTGC--ATGGGTTTTTACC---GTTC----TAAGCTTGCAAT---AAAAAGCTTGT-TTAT--------------------------------------------ATG
droAna3 scaffold_13337:308573-308614 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---GTTT----TGAGCTTGCTAA---CAAAAGCTCTG--TGC-GG------G-C-----------------------------TAAGGG
droBip1 scf7180000395155:449936-450107 + AAA-----------------TA--------TATCATCG-AATAC--CGTTACC--------------------TGTAAGTTTTT-AC-CAT------------ATTGTAAGTTGGTA-T--------TTTTA-GT-T-TCCGCCACGTTTCTTTG----------------------T---AAAATAAAACTAATAAGTTAGAAAGTGAAGGGAACT--CGGG-TTTCTC-CATCATTA-----ATATCCAACAGGTGGTTC-TGTGTTA-------------------------------ATGTGTGT------G------------------------------------------------------------------------------------------------------------------------------------------------------TG
dp5 XR_group6:12177504-12177799 - AAA-----------------TT--------AGTCAAAGTATAGTA-CA-TATTGGA----------------C-GCTGACTAAG-TTTG-A------------ACTGTAAGTACTGA-TCTACATATACATATTT-C-TTATCCACGTATTAAAAT--------------------GTAC-------------------------GAAAGTAGAACG--TTGTCTTTCGC-TATCTTCC-----ATATCCAACAAGTGGTTC-CCAAGTAG------------------------------CTCTGTGTGTGTGTGTG-TGT--TGTATTACTGTTAGAAAGC--GTTT---GCGTGTGCGCTTGCATGAGTGTTGAAT---G-TT----TGAGCTTTCAAA---GAAAAGCTCCA-TTATTGT------GGCTTGCAGCCAGCAG-GCACAGCAGGCACCCAGCATG
droPer2 scaffold_33:198570-198858 - AAA-----------------TT--------AGTCAAAGTATAGTA-CA-TATTGGA----------------C-GCTGACTAAG-TTTG-A------------ACTGTAAGTACTGC-TCTACATATACATATTT-C-TAATCCACGTATTAAAAT--------------------GTAC-------------------------GAAAGTAGAACG--TTGTCTTTCGC-TATCTTCC-----ATATCCAACAAGTGGTTC-CCAAGTAG------------------------------TTGTGTGTGTGTGTGTA-TT---------ACTGTTAGAAAGC--GTTT---GCGTGTGCGCTTGCATGAGTGTTGAAT---G-TT----TGAGCTTTCAAA---CAAAAGCTCTA-TTATTGT------GGCTTGCAGCCAGCAG-GCACAGCAGGCACCCAGCATG
droWil2 scf2_1100000004729:1107755-1107973 + C-------------------------------------------------------------------------------------------------------------------------------TTTGTAG-T-TAAGCCACGTTCAAAATAGGAGAATTTGTTGATTTGTTTTGGTAACAT-----------------ATACA-TATACAT-------------ACATGTGTAC-----ATATCCAACAAGTGGTTT-GCAGCTGT------------------------------GTCTGTCTGTGTGTGTG-TGA--GAGAG-CCCGTTAGAAAATGTGTGT---GTGTTTGTGTGT--CGTTGTGGTAAACGCTTTTT----GGAGCTTATCAA---AAAAAGCTTTTACTAT-GT------G-C-----------------------------TGACGA
droVir3 scaffold_13049:11857750-11858008 + AAA-----------------CA--------AAAAAAAA-AAAACA-AATAACGTGGCGCTTGGTACACTTTTCAGCGGATTTGC-ACACAA---------T--ACCGTAAGTTATAT-T--------TTGTA--ATTTAAAGCCATGTTTAAAA----------------------GTCGCAATAT-----------------AAACA-AAAGAATG--A--------GTGTATCATTAAT---ATATCCAACAAGTGGTTA-GCAGAGA-------------------------------TTGTGTGCAT----GTA-TTGGAT-------------GAAGCTTG-------------CGCT-------GCGTTAGAT---ACGT----AGAGCTTTCACA---TAAAAGCTTTG-CGTA-CA------G-C-------TTGCGGTGCTTT----------TCAGGG
droMoj3 scaffold_6680:8971875-8971979 - A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----ATATCCAACAAGTGGTTA-ACATAGA-------------------------------TTGAGCGT--------T-TGT---------------GTATTGTGGTTT---GCCTGTTGGTAT----TAGGTTC---------TA----AAAGCTTTTGAG---CAAAAGCTTTA-GACG-CT------G-C-----------------------------T-----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAA-----------------TA--------TTCCAAAC-AAAACA-CATTATTGGA----------------CTACTGATTCAT-ATCAAA------------TCTGTAAGTTTATC-T--------CTTTGTAT-T-TCAGCCACGTCTTAAAAT--------------------GTAGTTA-AC-----------------AAACAGTTATAATT--TGGTTG-TGGCTTTCCATTAATACAATATCCAACAAGTGGTTT-TCCTACAG------------------------------TTGTGT--------GTG-CCC---------------GAAAGTTTGTTT---GCATGTGTGTTT----CGGCGTTTACT---GTTT----TGAGCTTCCAAC---GGAAAGCTCGT-GGAA-AT------G-C-----------------------------TCAATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................AAACA-CATTATTGGA----------------CTACTG......................................................................................................................................................................................................................................................................................................................................................................................................2113.00312000000000000000
..................................AAAC-AAAACA-CATTATTGGA----------------CTACTG......................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000000000
.........................................AACA-CATTATTGGA----------------CTACTG......................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GTTTACT---GTTT----TGAGCTTCCA....................................................................2111.00100001000000000000
................................................................................................................................TTTGTAT-T-TCAGCCACGTCT..............................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
...............................................................................................................TTTATC-T--------CTTTGTAT-T-TCAGC.....................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..................................AAAC-AAAACA-CATTATTGGA----------------CT..........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..........................................................................................................................................................................................................................................CATTAATACAATATCCAACA......................................................................................................................................................................................................................2011.00100000100000000000
................................................TTATTGGA----------------CTACTGATTCAT-A..............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
.....................................C-AAAACA-CATTATTGGA----------------CTACTGA.....................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
...................................AAC-AAAACA-CATTATTGGA----------------CT..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..................................AAAC-AAAACA-CATTATTGGA----------------CC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTT----TGAGCTTCCAAC---GGAAAG.........................................................2111.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CATGTGTGTTT----CGGCGTTTAC..........................................................................................2111.00110000000000000000
droSec2
AAA-----------------TA--------TTCCAAAC-AAAACA-CATTATTGGA----------------CTACTGATTCAT-TTCAAA------------TCTGTAAGTTTATC-T--------GTTTGTAT-T-TCAGCCACGTCTTAAATT--------------------GTAATTA-AC-----------------AAACAGTTATAATT--TGGT-------TTTCCATTAATACAATATCCAACAAGTGGTTT-TCCTACAG------------------------------TTGTGT--------GTG-CCC---------------GAAAGTTTGTTT---GCATGTGTGTTT----CGGCGTTTTCT---GTTT----TGAGCTTCCAAC---GGAAAGCTCGT-GGAA-AT------G-C-----------------------------CCAATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................GTGTGTTT----CGGCGTTTTCT---GT....................................................................................2112.0020002
..........................................................................................................................................................................................................................................................................TACAG------------------------------TTGTGT--------GTG-CCC---------------GAAA...............................................................................................................................2111.0011000
......................................................................................TCAAA------------TCTGTAAGTTTATC-T--------G....................................................................................................................................................................................................................................................................................................................................................2111.0011000
dm3
AAA-----------------TA--------TTCCAAAC-AAAACA-CATTATTGGA----------------TTACTGATTCAT-TTCAAA------------TCTGTAAGTTTACC-T--------GTTTCTAT-T-TCAACTACGTCTTTAAAT--------------------GTAGTTT-AC-----------------AAACAGTTATAATT--TGGTTG-TGGCTTTCCATTAATATAATATCCAACAAGTGGTTT-TTCTACAG------------------------------TGGTGT--------GAG-CCC---------------GAAAGTTTGTTT---GCATGTGTGCTT----CGGCGTTTACA---GTTC----TGAGCTTCCAAC---GAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................TTAATATAATATCCAACAAG....................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AAGTTTGTTT---GCATGTGTG...........................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...............................................ATTATTGGA----------------TTACTGATTCAT-TTC............................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTTACA---GTTC----TGAGCTTCCAA...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AG------------------------------TGGTGT--------GAG-CCC---------------GAAAGT.............................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................................A-CATTATTGGA----------------TTACTGATTC..................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ACA---GTTC----TGAGCTTCCAAC---GG.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGTTT---GCATGTGTGCTT----CGGCGTTTAC..........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................AT-TTCAAA------------TCTGTAAGTTTA.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGT--------GAG-CCC---------------GAAAGTTTGTT........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CC---------------GAAAGTTTGTTT---GCATGTGC............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................TTTCTAT-T-TCAACTACGTCTT.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTCAAA------------TCTGTAAGTTTACC-T--------A....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TACAG------------------------------TGGTGT--------GAG-CCC---------------GAAAG..............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTCGT-GGAA-AT------G-C-----------------------------CA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGTGCTT----CGGCGTTTACA---GTTC----TGA...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AAACA-CATTATTGGA----------------TTACTGT.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGT--------GAG-CCC---------------GAAAGTTTGTTT---GCATG...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTTC----TGAGCTTCCAAC---GAAAA..........................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TATTGGA----------------TTACTGATTCAT-TTCA...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CGGCGTTTACA---GTTC----TGAGCT........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................TAATT--TGGTTG-TGGCTTTCCA........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TT-TTCTACAG------------------------------TGGTGT--------GAG-CC...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGT--------GAG-CCC---------------GAAAGTTTGTTT---....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................ACA-CATTATTGGA----------------TTACTGAT....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GAG-CCC---------------GAAAGTTTGTTT---GCATGTG.............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................GTTATAATT--TGGTTG-TGGCTTT...........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCAACTACGTCTTTAAAT--------------------GTA.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTACA---GTTC----TGAGCTTCCAAC---...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GT--------GAG-CCC---------------GAAAGTTTGTT........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TAGTTT-AC-----------------AAACAGTTATAAT............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................AAACA-CATTATTGGA----------------TTACTG......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...............................................ATTATTGGA----------------TTACTGATTCAT-A..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
AAA-----------------TA--------TTCCAAAC-AAAACA-CA....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CC---------------GAAAGTTTGTTT---GCATGTG.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GTGT--------GAG-CCC---------------GAAAGTTTGTT........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AATT--TGGTTG-TGGCTTTCCA........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................CA-CATTATTGGA----------------TTACTGAT....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTATTGGA----------------TTACTGATTCAT-TTCAAA------------.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTTT---GCATGTGTGCTT----CGGCGTTTA...........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................TAATT--TGGTTG-TGGCTTTCCAA.......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................TTACTGATTCAT-TTCAAA------------T............................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GA----------------TTACTGATTCAT-TTCA...........................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................T--------GAG-CCC---------------GAAAGTTTGTTT---TTT.................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ACTGATTCAT-TTCAAA------------TGA..........................................................................................................................................................................................................................................................................................................................................................................19170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATA-----------------TA--------TTCCAAACTAAAACA-CATTGTTGGA----------------CTTCTGATTCAG-TTCAAA------------TCTGTAAGTTTACC-TATGTATGTATTTGTAT-C-TAAGCCACGTCTGTAATTATAT----------------GTAGTAA-AC-----------------AAACAGTTCGAATT--TGTTTG-CGGCTTTGCATTA-----ATATCCAACAAGTGGTTT-TCCTACAG------------------------------TAGTGT--------GTG-AC-----------------GAAGTTTGTTT---GCATGTGTGCTT----CGGTTTTTACA---GTTC----TGTGCTTCCAAC---GGAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................C-TAAGCCACGTCTGTAATTATA.....................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
AAA-----------------TA--------TTCCAAACT-AAAAA-CATTATTGGA----------------CTACTAATTTAT-TTAAAA------------TCGGTAAGTTTAGT-T--------CTTTCTAA-T-TCAGCCACGTTGTTGTAG--------------------ATAGTTA-AC-----------------AAATAG------TT--TGGTTG-CGGCTTTCCATTA-----ATATCCAACAAGTGGTTT-TCCTATAG------------------------------TGGTGT--------GTG-GCT---------------GTAAGTTTGTTT---GCATGTGTGCTT----CGGTTTTTACA---GTTC----TGAGCTTCCAAC---GAAAAGCTCGT-GGAA-AA------G-C-----------------------------CAAATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AAT-----------------TA--------TTCCAAATT-AATAA-AAGTATTTGA----------------CGACGCATTTAA-ATAATT------------TCTGTAAGTAAAAC-A--------TTTTA-AG-T-TAACCTAGTTCTTTTAAA--------------------ACCTTCA-AC-----------------AAATAAATAGAACT--CTGTTG-CGGCTTTTCATTA-----ATATCCAACAAGTGGTTT-TC-TGTAG------------------------------TGGTGTAT------GTG-TTT---------------GAAAGTTTGTTT---GCATGTGTGTTT----TGGTTTTTACC---GTTC----TGAGCTTCCAGC---CAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAGATGSizeHit CountTotal NormTotal
No Reads
droBia1
AAT-----------------TATTATTATATTCCAAATT-AAATA-G---ATTGGA----------------CTAGCGACTAAA-ATACAA------------ACTGTAAGTTGCCC-T--------CTTTG----C-TTAGCCACGTTTTAGAAC--------------------T--CTT--AA-----------------AAATAAGTAGAACT--TGGTGG-CGGCTTTTCTCTA-----ATATCCAACAAGTGGTTA-GAGTGTAG------------------------------TGGTGT--------GTG-TTT---------------GGAAGTTTGTCT---GCATGTGTGTTT----TTGTTTTTACC---GTTC----TGAGCTTCCCATG--GAAAAGCTCGT-GGAA-AT------G-G-----------------------------C-ATTGSizeHit CountTotal NormTotal
No Reads
droTak1
AAT-----------------AG----AAAATTCCAAATT-AAATT----AATTGGA----------------CTACTGATTATA-ACAAGA------------ATTGTAAGTTGAAC-T--------CTTTA-TT-T-TTAGCCACGTCTTAGAAA--------------------ACTCTTT-AT-----------------AAATTATTAGAACT--TGGTGG-CGGCTTTTCTTTT-----ACACTCAACAAGTGGTTC-ACCTGTAG------------------------TTGTAGTGGTGT--------GTATTTT---------------GAAAGTTGGCCT---GCATGTGTATTG--TTTTGTTTTTACC---GTTTTTATCGAGCTTCCAACGGGGAAAAGCTCGT-GGAA-ATGGAAATG-T-----------------------------CAAATGSizeHit CountTotal NormTotal
No Reads
droEle1
AAC-----------------TA--------TTCCAAATTAAAATA-AATAATTGGA----------------TTGTAAACTAAA-ATCGAA------------TCTGTAAGTTCATC-T--------CTTTGTTT-T-TAAGCCACGTCTTTAAGA--------------------GTAGTTA-AC-----------------AAATAAATAGAACTTTTGGTTG-CGGCTTTTTATTA-----ATATCCAACAAGTGGTTTATAATTTAG------------------------------TGGTGTGCGTGTGTGTG-TTG---------------GAAAGTTTGTTT---CCATGCTTCTTA----CGGT-TTTACC---ATTC----TGAGCTTCCAAT---GAAAAGCTCAT-GAAA-AT------G-C-----------------------------CAAATGSizeHit CountTotal NormTotal
No Reads
droRho1
AAT-----------------TC--------TTTCAAATT-AAATA-AATTTTTGGA----------------CT-------TAC-ACCGAA------------TCTGTAAGTTTAAT-C---------ACTGTTT-T-TTAACCGCATCTTTAAAA--------------------GTAGTTA-GA-----------------AAGTAAATATAACT--TGGTGG-CGGCCTTTCATTA-----ATATCCAACAGGTGGTTT-TTCTGTAG------------------------------TGGTGTGTTTGT--GGG-CTT---------------GAATGTTTGTTT---GCATGTGTGTTA----GTGGTTCCACC---GTTC----TGAGCTTTCAAG---GAAAAGCTCGT-GGAA-AT------G-C-----------------------------CAAATGSizeHit CountTotal NormTotal
No Reads
droFic1
AAT-----------------TA--------TTCCAAATT-AAATATAATTATT----------------------------CAA-ATAAAAACTTGAGTATACTTGGTAAGTTTATATT--ACATA-TTTTGTAT-T-TAAGCCACGTCTGTAAAC--------------------GTAGTTA-AC-----------------AAATAAATAGAATC--CGGTAG-CGGCTTTTCATTA-----ATATCCAACAAGTGGTTT-TTCT-TAG------------------------------TAGTGTGCGT----GTG-TTT---------------GAAAGTTTGTTT---GCATGAGTGTTT--GT-GTTTAGTTCC---GTTC----TGTGCTTCCA-G---GAAAAGCTCGT-GGAA-AA------G-C-----------------------------CAAATGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGGCGCGTGTCTAATTGGATA--------TCCGCA-----------ATTACTGGA----------------T-ATTAATTAAATATACAA------------ACTGTAAGTAGAAA-C--------TATTACAT-T-TTAGCCACGTTTCTGAAT--------------------GTAGTTG-GT-----------------AAACAAATACAACT--AGGTTT-CGGCTTTTCATTA-----ATATCTAACAAGTGGTTG-TAGTT-CTCGCTCTCTATCTCTCTCTCTATCTCTGCGATTGTATGTATGTATGCA-TTT---------------GAAAGTTTGTTGTGTACATGAGTGTGC--ATGGGTTTTTACC---GTTC----TAAGCTTGCAAT---AAAAAGCTTGT-TTAT--------------------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droAna3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---GTTT----TGAGCTTGCTAA---CAAAAGCTCTG--TGC-GG------G-C-----------------------------TAAGGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AAA-----------------TA--------TATCATCG-AATAC--CGTTACC--------------------TGTAAGTTTTT-AC-CAT------------ATTGTAAGTTGGTA-T--------TTTTA-GT-T-TCCGCCACGTTTCTTTG----------------------T---AAAATAAAACTAATAAGTTAGAAAGTGAAGGGAACT--CGGG-TTTCTC-CATCATTA-----ATATCCAACAGGTGGTTC-TGTGTTA-------------------------------ATGTGTGT------G------------------------------------------------------------------------------------------------------------------------------------------------------TGSizeHit CountTotal NormTotal
No Reads
dp5
AAA-----------------TT--------AGTCAAAGTATAGTA-CA-TATTGGA----------------C-GCTGACTAAG-TTTG-A------------ACTGTAAGTACTGA-TCTACATATACATATTT-C-TTATCCACGTATTAAAAT--------------------GTAC-------------------------GAAAGTAGAACG--TTGTCTTTCGC-TATCTTCC-----ATATCCAACAAGTGGTTC-CCAAGTAG------------------------------CTCTGTGTGTGTGTGTG-TGT--TGTATTACTGTTAGAAAGC--GTTT---GCGTGTGCGCTTGCATGAGTGTTGAAT---G-TT----TGAGCTTTCAAA---GAAAAGCTCCA-TTATTGT------GGCTTGCAGCCAGCAG-GCACAGCAGGCACCCAGCATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................GGA----------------C-GCTGACTAAG-TTTG-A------------ACTGC........................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................CA-TATTGGA----------------C-GCTGACTAAG-TTTG-A------------ACT..........................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
droPer2
AAA-----------------TT--------AGTCAAAGTATAGTA-CA-TATTGGA----------------C-GCTGACTAAG-TTTG-A------------ACTGTAAGTACTGC-TCTACATATACATATTT-C-TAATCCACGTATTAAAAT--------------------GTAC-------------------------GAAAGTAGAACG--TTGTCTTTCGC-TATCTTCC-----ATATCCAACAAGTGGTTC-CCAAGTAG------------------------------TTGTGTGTGTGTGTGTA-TT---------ACTGTTAGAAAGC--GTTT---GCGTGTGCGCTTGCATGAGTGTTGAAT---G-TT----TGAGCTTTCAAA---CAAAAGCTCTA-TTATTGT------GGCTTGCAGCCAGCAG-GCACAGCAGGCACCCAGCATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................CAAAGTATAGTA-CA-TATTGGA----------------C-GCTGACT...................................................................................................................................................................................................................................................................................................................................................................................................2913.003300000
............................................A-CA-TATTGGA----------------C-GCTGACT...................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
...............................................A-TATTGGA----------------C-GCTGACTAA.................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................AGTA-CA-TATTGGA----------------C-GCTGACTAAG-T..............................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droWil2
C-------------------------------------------------------------------------------------------------------------------------------TTTGTAG-T-TAAGCCACGTTCAAAATAGGAGAATTTGTTGATTTGTTTTGGTAACAT-----------------ATACA-TATACAT-------------ACATGTGTAC-----ATATCCAACAAGTGGTTT-GCAGCTGT------------------------------GTCTGTCTGTGTGTGTG-TGA--GAGAG-CCCGTTAGAAAATGTGTGT---GTGTTTGTGTGT--CGTTGTGGTAAACGCTTTTT----GGAGCTTATCAA---AAAAAGCTTTTACTAT-GT------G-C-----------------------------TGACGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................CTGT------------------------------GTCTGTCTGTGTGTG........................................................................................................................................................19100.10101000
droVir3
AAA-----------------CA--------AAAAAAAA-AAAACA-AATAACGTGGCGCTTGGTACACTTTTCAGCGGATTTGC-ACACAA---------T--ACCGTAAGTTATAT-T--------TTGTA--ATTTAAAGCCATGTTTAAAA----------------------GTCGCAATAT-----------------AAACA-AAAGAATG--A--------GTGTATCATTAAT---ATATCCAACAAGTGGTTA-GCAGAGA-------------------------------TTGTGTGCAT----GTA-TTGGAT-------------GAAGCTTG-------------CGCT-------GCGTTAGAT---ACGT----AGAGCTTTCACA---TAAAAGCTTTG-CGTA-CA------G-C-------TTGCGGTGCTTT----------TCAGGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................A-AATAACGTGGCGCTTGGTACACT...............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................AAGCCATGTTTAAAA----------------------GTCGCA..............................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AT----GTA-TTGGAT-------------GAAGCTTG-------------CGCT-------GCG...............................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.........................................................GCTTGGTACACTTTTCAGCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
..............................................AATAACGTGGCGCTTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGTGGTTA-GCAGAGA-------------------------------TTGTG..................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
....................................AA-AAAACA-AATAACGTGGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................TAT-----------------AAACA-AAAGAATG--A--------GT..............................................................................................................................................................................................................................................1911.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----ATATCCAACAAGTGGTTA-ACATAGA-------------------------------TTGAGCGT--------T-TGT---------------GTATTGTGGTTT---GCCTGTTGGTAT----TAGGTTC---------TA----AAAGCTTTTGAG---CAAAAGCTTTA-GACG-CT------G-C-----------------------------T-----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/19/2015 at 01:49 PM