ID:

dsi_26067

 Coordinate:

2r:8628372-8628521 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9 -11.9 -11.9

Flybase annnotation

intron [2r_8628570_8628701_+]; CDS [2r_8628528_8628569_+]; five_prime_UTR [2r_8628411_8628527_+]; exon [2r_8628411_8628569_+]

No Repeatable elements found

Sense Strand Reads

-----------------------------------------------------------------------------------------###############################################################################################################################################################--
TTAATTTTGTTTAAGAATACTTTACGATTTGTTAAGTGTTGGCTAACGTTGGGAATCGACAACAATACTGGGCGAATCGATTGTATCGAATACATATCGATTACACCCCCAACTGTCCACGCGAGAGTTTTATATTTTTTATTTTTACATGCATATTTGTTGATAACTGGGGTTTTCTGTGAACCGCGTCTAACTCCCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
***********************************************************************************************.....(((((.(((((..((((...(((((.((......................))...))))).))))..))))).....)))))..****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 M053
female body
 GSM343915
embryo
 M024
male body		 SRR902009
testis
...........................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGAGA. 30 1 1 6.00 6 4 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGA... 28 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGGAGAAAATCTCGGCCATCGAGT....... 25 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATCTC.................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
............................................................AACAATACTGGGCTCATCGA.......................................................................................................................................................................... 20 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATTGGAGAAAATCTCGGCCATCGAGT....... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGAAAATCTCGGCCATCGAGTCGGAG.. 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................ATCGATTACACCCCCAACTGTCCACGC................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................TGTTGATAACTGAGGTTTTCTGTGA.................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TGTTGATAACTGGGGTTTTCTGTGAAC.................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGCATATTTGTTGATAACTGAGGTT............................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGCATATTTGTTGATAACTGGGGTTTT.......................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................TGGCTAACGTTGGGAATCGACCACAA......................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TGCATATTTGTTGATAACTGGGGTTTTCT........................................................................ 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TTGTTGATAACTGGGGT............................................................................. 17 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TGGAGAAAATTTCGGCCATCGAGTCGGAGA. 30 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGT....... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGCCAGCCATGAGCACAATATTGGA........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GATTGCACCTCCAACTGTCCACGCGA.............................................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................ACAATACTGGGCTCATCGA.......................................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTAACTCCCAGCCAGCCATGAGCACAAT................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................GTCTAACTCCCAGCCAGC............................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................TGATAACTGAGGTTTTCTGTGAACCG................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TAACTGGGGTTTTCTGTGAACCGCGTC............................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATCTCGGC............... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GTTGATAACTGGGGTTTTCTGTGAACC................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATC.................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TCTACATGCATATTTGTTGATAACTGA................................................................................ 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TTTTTTACATGCATATTTGTTGA....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGAA.. 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTCTGTGAACCGCGTCTAACTACCA................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTACATGCATATTTGTTGATAACTGA................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTCTGTGAACCGCGTCTAACTCCCA................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGGGGTTTTCTTTGAACCGCGTCTA.......................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TATTGGAGAAAATCTCGGCCATCGAGTCGGA... 31 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................ATAACAATACTGGGCTCATCGA.......................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTCTGTGAACCGCGTCTCACTCCCAGCC................................................ 28 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................TTTCTGTGAACCGCGTCTAACTCCC.................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................TTCTGTGAACCGCGTCTAA......................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCCAGCCAGCCATGAGCACA................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................CATATTTGTTGATAACTGGGGTTTTCT........................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTCTGTGAACCGCGTCTAAGTCCCA................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTGATAACTGAGGTTTTCTGTGAACCGC............................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTCTGTGAACCGCGTCTA.......................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGTGAACCGCGTCTAACTCCCAGCCAGC............................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....TTTGGTTTATGAATACTTTACAAT.............................................................................................................................................................................................................................. 24 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................CTAACGTTGGGACCCGAAA............................................................................................................................................................................................. 19 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................ACAATACTGGGCTCATCGAG......................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................CAATACTGGGCTCATCGA.......................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................CGGGCTAATCGATTGTATGG.................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0
........................................AGCTAACGTTGGGAA................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTTGTTGATGGGTGGGGTTTT.......................................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................TTACAGGCAGATTCGTTGA....................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................TGTTGATAACTGTGGTA............................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

AATTAAAACAAATTCTTATGAAATGCTAAACAATTCACAACCGATTGCAACCCTTAGCTGTTGTTATGACCCGCTTAGCTAACATAGCTTATGTATAGCTAATGTGGGGGTTGACAGGTGCGCTCTCAAAATATAAAAAATAAAAATGTACGTATAAACAACTATTGACCCCAAAAGACACTTGGCGCAGATTGAGGGTCGGTCGGTACTCGTGTTATAACCTCTTTTAGAGCCGGTAGCTCAGCCTCCA
******************************************************************.....(((((.(((((..((((...(((((.((......................))...))))).))))..))))).....)))))..*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
........................................................................................................................................................................................GCGCAGATTGAAGGTCGGTCG............................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................AGATATAGGGTGGGTCGGTAC......................................... 21 3 1 1.00 1 0 1 0 0 0
....................................................................................................AACGTGGAGGTTGACAGGTGC................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0
..................................................................................................................................ATATAAAAAATAAAAATGTAGGTGT............................................................................................... 25 2 2 0.50 1 0 0 1 0 0
..................TGAAATGCTAAACAA......................................................................................................................................................................................................................... 15 0 3 0.33 1 0 0 1 0 0
.....................................................................................................................................................................................TTGGCGCAGGTTGGAGGTCGG................................................ 21 3 3 0.33 1 1 0 0 0 0
............................................................................................................................................................................................................................CCTCTTTTATAGCCG............... 15 1 5 0.20 1 0 0 0 1 0
......................................................................................................................................................................................................................................AGCCGCTAGCTCAGC..... 15 1 14 0.14 2 0 0 0 0 2
.........................................................................................TATGTAAAGCTAATTTGG............................................................................................................................................... 18 2 14 0.14 2 0 0 0 2 0
..........................................................................................................GGCGTTGCCAGGTGCG................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8628322-8628571 + dsi_26067 TTAA----TTTTGT----------------------------------------------------------------------------------------T-------T---AAGAATACTTTA-CGATTTGTTAAGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------CAACAATACTGG--GCGAA---------------TCGATTGTATCGAATACATATCGATTACACC---------------------------CCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTCTAACTCCCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droSec2 scaffold_1:5474668-5474916 + TAGA----TTTTGT----------------------------------------------------------------------------------------T-------T---AAGAATACTTTT-CGATTTGTTAAGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------CCACAATACTGT--G-AAA---------------TCGATTGTATCGAATACATATCGATTGCACA---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTCTAATTCCCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
dm3 chr2R:7924721-7924971 + TTAA----TTTTGT----------------------------------------------------------------------------------------C-------T---AAGAATACTTTTACGATTCGTTAAGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------CCACATTACTGA--ACAAA---------------TCGATTGTATCGAATACATATCGATTGCACC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATATTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTTTAACTCTCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droEre2 scaffold_4845:17871180-17871440 - TCAA----TTTTAT----------------------------------------------------------------------------------------T-------A---AAGAATACTATTACGATTTCTTAAGTGCTGGCTAAC----------G-----TTGGGAAT--------------------CAACGA-----TGATGTTGCCACATTACTGG--GAAAA---------------TCGATTGTATCGAATACTTATCGATTGCTCC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGG-GTT-T---------------TCTGTGAACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droYak3 2R:9027761-9028021 - TACA----TTTTTT----------------------------------------------------------------------------------------G-------A---AGGAATACTATT-ATATTTTTTAAGTGCTGGCTAAC----------G-----TATTGAAC--------------------CAACCA-----TGATGTTGCCACATTGCTGG--AAAAA---------------TCGATTGTATCGACTACATATCGATTGCTCC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droEug1 scf7180000409462:548455-548703 - GCTA----ATTAGT-----CTAT--------------------------------ACA----------AAAAATAAATAAAAGTAAAAAAAATACTAAG----------------------------------------T----------------------GCGT---------------------------------------T--TGCTGCCACATTTGTGG--GTATA---------------TCGAATATATCGAATACTCATCGTTTACTAT---------------------------TCCAACTGTCCACGCGAGAGTT------TTATTT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAATTGGAGTT-T---------------TTTGTGAACC-------------GAGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droBia1 scf7180000302292:730924-731184 + CGCC---AGTTTTTG-------AATTGCGAACATTTGAGC---------------ACA--------------------------------------------------------------------ACAA----ATAAGTGTTGGCTAACGAAGGC-CA---GCTT---------------------------------------T--TGTTTCCACATTTCGCC--AAGCA---------------TCGAGTGTATCGAATACACATCGATAACTGC---------------------------TCCAACTGTCCACGCGAGAGTT------TCCTAT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TTAGTGGACC-------------GCGTATAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droTak1 scf7180000415820:332112-332359 + TTAA----ATT-AT----------------------------------------------------------------------------------------G-------A-----CAAAAATTTA-AGAGC----CAGTGCTGGGTAACGCCTAT-CA---GCCT---------------------------------------T--TATTGCCACATTTCTGC--ACATA---------------TCGATTTAATCGAATACATATCGATTACGGC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTATATGCAT-----AT--------CTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GGGGACAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droEle1 scf7180000491214:3448186-3448432 + GCCA----CTCCTT-----TTAAAT--------------------------------A-----ATACCATTAAATACCAACTA--CTAAATATACTAACC---AAA------------------------TG----CAGTGTTGGTCAATGCTGGC-TG---GCTT---------------------------------------T--TGCTTCC---TTTCGCACA--------------------------------------------C------TGTC-----------------------GCCTGCTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTACATGCCG-----AT--------TTGTTGATTTTTTGGGCT-T---------------TTAGTGGACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droRho1 scf7180000779932:353552-353789 + TAAA----TAATAC-----------------------------------------------------CATAAAATACTAAGAATTTAAAATACACCAAGC---AAA------------------------TG----CAGTGTTGGTCACCACTGGC-CA---GCTT---------------------------------------T--TCTTTCC---TTTTGCACA--------------------------------------------C------TGTC-----------------------GCCTGCTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAATTTGGGTT-T---------------TTAGTGGACC-------------GCCTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGT
droFic1 scf7180000453809:315612-315879 + TTAA----GTTTATGTACTTTAAATTGT---------ACCAAAACATTCATCCATGCAAAGAGATACCATA-----------------AATATACTAAAT---A-------------------------A----CTTAGTGTTG-TTAACGCTGGA-AT---GCTC---------------------------------------T--TCGTTCC---TTTGCAACA--------------------------------------------C------TTTC---------------------GCTCCTGCTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGG--TC-C-TGAGCC---------AAGTGAACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCGCGGCCATCGAGTCGGAGGT
droKik1 scf7180000302682:1146330-1146556 - CTAC----ATC-------------------------------------------------------------------------------------AAGTGTGACCTGCCGCC-------------ACGAGG----CAGTGTTGGCTAAC----------A-----ATGAG--T--------------------CAA------------------------------AAATATCGATTTATCGATTTTG----GAATCGATT-----TCAGTTCCACCTCTA-------------------------GCCTTGTCCACGCGAGT----------TATTT-TAT-TATT-TAAAC--TAAA-----TT--------TTGTTGATAGCTGGGATC-T--G------------TTAGGGAACC-------------GCACTG--------ACCTGCCATGAGCACAATTTTGGAGAAAATCGCGGCCATCGAGTCGGAGGT
droAna3 scaffold_13266:2700677-2700915 - ACAC----TATCGA----------------------------------------------------------------------------------------G-------G---AAGAATAATTTG-AAATGTAT---------------------------AATT--------TTATCGATAGTATT-TGTATATAGCTTATTTA--TCGATAT---GTTGGTATT--------------------------------------------TTGGCAA---------------------------CCCTACTCTCCACGCGAGTGCCACAAATCTACTTTATT-TATT-TCTACATGCAT-----TA--------TTGTTGATTTAAAAGTTC-C---------------ATAGAAAGCG-------------GCTTTGATCTAGGACGCCATCATGAGCACGATCTTGGAGAAAATTGCGGCCATCGAGTCCGAGGT
droBip1 scf7180000396427:1192863-1193100 - TCGC----TATTGT----------------------------------------------------------------------------------------G-------A---A-TCATAATTTA-AAATGTGT---------------------------CCAT--------TTATCGATAGGTTT-TGTATATCGCTTGATTT--TCGATAT---GTTGATATT--------------------------------------------TTGGCAA---------------------------CCCTACTCTCCACGCGAGTGCCACAAATCTACTTTATT-TATT-TCTACATGAAT-----TT--------TTGTTGATTTAAAAGTTT-T---------------ATAGAAAGCG-------------GCTTTGTCCTGAGACGCCAACATGAGCACAATCTTGGAGAAAATTGCGGCCATCGAGTCCGAGGT
dp5 3:6658228-6658378 + A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGTCACAC-T------------------------GCTCCCGTTGTCCACGCGAGTGCC------GTTTTTTTTG-TATTTTTTACGTAAAT-----AT--------TTGATAATAAA---------------------------GTGA-TA------A--AATAAAATTTAGCTGAGATGTAGCCATGAGTACGATTCTGGAGAAAATTTCGGCCATCGAGTCGGAGGT
droPer2 scaffold_4:1847264-1847417 - TCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATAC-T------------------------GCT-CCGCTGTCCACGAG----TT------T-------TT-TATT-TTTGTAAAAA----A-AATTTCAAATTATTTGATAATAAAGTTT-T---------------GTTGA---TA------A--AATAAAATTTAGCTGAGACGTAGCCATGAGTACGATTCTGGAGAAAATTTCGGCCATCGAGTCGGAGGT
droWil2 scf2_1100000004513:5762389-5762612 - TAAA----ATTTGT----------------------------------------------------------------------------------------C-------ACCAATCGATAATTTG-CAATC----------------------------G-----GTTGG--T--------------------CAG------TAA--TCG----------------ACTTA--------TCGGTAATCGGGTGTATTTCTTTGGTATCG------------------------------------GTTGACGTCCACGCGAGAAGT-----TTTTTTT-TTTGTA-T-TTTGTATAAAA----ATA--------TTATAAAT-----------------TTAATTAAATTCTGTTAATT-------------AAA-CTAACCCCTGCTTAGACATGAGTACCATTTTGGAGAAGATTTCGGCTATTGAGTCGGAGGT
droVir3 scaffold_12875:8580987-8581251 - TTTA----TCGTTA---------------ACT--------------------------------------------------------------------AGTTAATGCATCC--------------------------------------CTGGAA-TGCATGTTTTGGTATT-TTTCGATAAGTTTACGTA-CGA----------------CTGCAC--CTGT--AAAAA---------------TCGATTTAAT-------------------------ATTATCGCAGTGACGAAGTAT--CGACACTCTCCACGCGAGTTT-----------AT-TTT-CGTT-TCA--ATGTATAAAAATT--------TTGTAAATAGC----GCTCTTTAAATTAACTAAACATT------GGTATTAAACAAC------T---AACGTAGCGGCGATGAGTACAATTCTGGAAAAAATTGCGGCCATCGAGTCGGAGGT
droMoj3 scaffold_6496:18625954-18626203 + TTATTCTATATTTTG-------GAGCGCCAGT--------------------------------------------------------------------ATTTTATGCATCC--------------------------------------CTGGTACA---GCTTTTGGTAAT--------------------------------------------------------TT---------------TCGATT-TATCCGATATAAA---------------ATTATCGCAGTGACTCT-TAT--CGGCAGTCTCCACGCGAG--TT------T---AT-TTT-CGTT-TTT-AATGCATTAAAAAT--------TTGTAAATAGT----ACTCATCGATTTGACTTAACTTT------GGCATTAAATAAT------T---AACCCGGAAGCGATGAGTACGATTCTTGAGAAGATTGCGGCCATCGAGTCGGAGGT
droGri2 scaffold_15245:1990141-1990377 - TGCT----TTTTAA---------------GGT--------------------------------------------------------------------ATTTTGTGCAGCC--------------------------------------CTGCTA-TGG-----TTGGTATT-TCG----------------------------------------------------------------------TGATTGAAT--------TATCGATACTT----T-ATAATCGCCGTGCCGAT-AAT--CACCACTCTCCACGCGAGTTTA------TTTTCT--------T--TTTAATGCATTAAAATT--------TTGTAAATAGC----ACAATTAAAATTAATTAAAGTAC------AATATTAAGAACC------T---AGCGCAGCAGCGATGAGTACCATACTGGAGAAGATTGCGGCCATCGAGTCGGAGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTAA----TTTTGT----------------------------------------------------------------------------------------T-------T---AAGAATACTTTA-CGATTTGTTAAGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------CAACAATACTGG--GCGAA---------------TCGATTGTATCGAATACATATCGATTACACC---------------------------CCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTCTAACTCCCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGAGA.3016.00600000014100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGA...2814.00400000012010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGAAAATCTCGGCCATCGAGT.......2513.00300000030000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATCTC..................2512.00200000011000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGAAAATCTCGGCCATCGAGT.......2612.00200000000020000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAATCTCGGCCATCGAGTCGGAG..2712.00220000000000000000
..........................................................................................................................................................................................................................................................................ATCGATTACACC---------------------------CCCAACTGTCCACGC..................................................................................................................................................................................2711.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGTTGATAACTGGGGTT-T---------------TCTGTGAAC...............................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................TGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------T.......................................................................................2711.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................TGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCT.....................................................................................2911.00100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTGTTGATAACTGGGGT..........................................................................................................1711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGT.......2411.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCCATGAGCACAATATTGGA...........................2511.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACTCCCAGCCAGCCATGAGCACAAT.................................2811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTAACTCCCAGCCAGC.............................................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTC............................................................2711.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATCTCGGC...............2811.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------.................................................................2711.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATC....................2311.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGAA..2911.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTCTAACTCCCA...................................................2511.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGAGAAAATCTCGGCCATCGAGTCGGA...3111.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-T---------------TCTGTGAACC-------------GCGTCTAACTCCC....................................................2511.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTCTAA.........................................................1911.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGCCAGCCATGAGCACA...................................2111.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................CAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCT.....................................................................................2711.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTCTA..........................................................1811.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACC-------------GCGTCTAACTCCCAGCCAGC.............................................2811.00100000001000000000
droSec2
TAGA----TTTTGT----------------------------------------------------------------------------------------T-------T---AAGAATACTTTT-CGATTTGTTAAGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------CCACAATACTGT--G-AAA---------------TCGATTGTATCGAATACATATCGATTGCACA---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTCTAATTCCCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................ATGCAT-----AT--------TTGTTGATAACTGGGGT..........................................................................................................2511.0010100
.....................................................................................................................................................................................................................................................................................A---------------------------TCCAACTGTCCACGCGAGAGTT------.....................................................................................................................................................................2311.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCAGCCAGCCATGAGCACAAT.................................2411.0010010
.............................................................................................................................................................................................................................................................................................................................................................................AT--------TTGTTGATAACTGGGGTT-........................................................................................................2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGAGCACAATATTGGA...........................2011.0010001
.............................................................................................................................................................................................................................................................................................................................................................................AT--------TTGTTGATAACTGGGGT..........................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGCACAATATTGGAGA.........................2011.0010010
.....................................................................................................................................................................................................................................................................................................................................................................CAT-----AT--------TTGTTGATAACTGGGGTT-........................................................................................................2311.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................AACTGGGGTT-T---------------TCTGTGAACC-------------GCGT.............................................................2511.0010010
.............................................................................................................................................................................................................................................................................................................................................................TTTACATGCAT-----AT--------TTGTTG.....................................................................................................................1911.0010010
..................................................................................................................................................................................................................................................................................CACA---------------------------TCCAACTGTCCACGCGAG...............................................................................................................................................................................2211.0010100
dm3
TTAA----TTTTGT----------------------------------------------------------------------------------------C-------T---AAGAATACTTTTACGATTCGTTAAGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------CCACATTACTGA--ACAAA---------------TCGATTGTATCGAATACATATCGATTGCACC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATATTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTTTAACTCTCAGCCAGCCATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................ACTGTCCACGCGAGAGTT------.....................................................................................................................................................................18115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000107500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTG..................................................................................2917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTTTAACTCTCAGC.................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................T--------TTGTTGATAACTGGGGT..........................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------------GCGTTTAACTCTCAGCCAGCCATGAGCA.....................................3014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGAAAATCTCGGCC..............1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTTTAACTCTCA...................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCTCAGCCAGCCATGAGCAC....................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................T-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGT...................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACTCTCAGCCAGCCATGAGCACA...................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGCACAATATTGGAGAAAATC....................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGAAAATCTCGGCCATC...........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGAAAATCTCGGCCATCGAGT.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGGGGT..........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................GCACC---------------------------TCCAACTGTCCACGCGAGAG.............................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AT--------TTGTTGATAACTGGGGT..........................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGCCATCGAGTCGGAG..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACTGTCCACGCGAGAGTT------TTATA................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ACATATCGATTGCACC---------------------------TCCAACTGTC.......................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CAT-----AT--------TTGTTGATAACTGGG............................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCCATCGAGTCGGAG..1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ACATATCGATTGCACC---------------------------TCCAACTGTCCA.....................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TT-T---------------TCTGTGAACC-------------GCGTTTAACTC......................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGAACC-------------GCGTTTAACTCTCAGCCA...............................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................ATATCGATTGCACC---------------------------TCCAACTGTC.......................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCT.....................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGATAACTGGGGTT-T---------------TCTGTGAAC...............................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------.................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCAGCCATGAGCACAATATTGGA...........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CCAACTGTCCACGCGAGAG.............................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACC-------------GCGTTTAACTCTCAGCCAGC.............................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GATTGCACC---------------------------TCCAACTGTCCA.....................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACTCTCAGCCAGCCATGAGCACAA..................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................ATTCGTTAAGTGTTGGCTAAC----------G-----............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TTT-TATT-TTTACATGCAT-----AT--------...........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGAACC-------------GCGTTTAACTCTCA...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGCACAATATTGGAGA.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGAGCACAATATTGGAG..........................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TT-T---------------TCTGTGAACC-------------GCGTTTAACTCTCAGC.................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CC---------------------------TCCAACTGTCCACGCGAGAGT............................................................................................................................................................................2311.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GATTGCACC---------------------------TCCAACTGTCCAC....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GCAT-----AT--------TTGTTGATAACTGGGGT..........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................TTAAGTGTTGGCTAAC----------G-----TTG.........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ACATATCGATTGCACC---------------------------TCC..............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTAACTCTCAGCCAGCCATGAGC......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTT-T---------------TCTGTGAACC-------------GCGTTTAAC........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CAT-----AT--------TTGTTGATAACTGG.............................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTACATGCAT-----AT--------TTGTTGATAACTGA.............................................................................................................2611.0010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CGCGAGAGTT------TTATATATTT-TAT.......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCTCAGCCAGCCATGAGCACAA..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCTCGGCCATCGAGTCGGAG..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TAAGTGTTGGCTAAC----------G-----TTGG........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................T-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-T---------------TCTGTGAACC-------------GCGTTTAACTCTCA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAATATTGGAGAAAATCTCGGCC..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGGGGTT-T---------------........................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGAAAATCTCGGCCATCGAG........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTAACTCTCAGCCAGCC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ACGCGAGAGTT------TTATATATTT-T.........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATAACTGGGGTT-T---------------TCTGTG..................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTAACTCTCAGCCAGCCATG.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTAACTCTCAGCCAGCCATG.........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CC---------------------------TCCAACTGTCCACGCGAGAGTT------.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACC-------------GCGTTTAACTCTCAGCCAGCC............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACTGTCCACGCGAGAGTT------T....................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-T---------------TCTGTGAACC-------------GCGTTTAACTCT.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------------GCGTTTAACTCTCAGCCAGCCA...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTTTAACT.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACC---------------------------TCCAACTGTCCACGCGAGAGTT------TT...................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGCCATCGAGTCGGAG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GTCCACGCGAGAGTT------TTATAT...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCAGCCAGCCATGAGCAC....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCACC---------------------------TCCAACTGTCCACGCGAGAGTT------.....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CGCGAGAGTT------TTATATATTT-T.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CAT-----AT--------TTGTTGATAACTGGGGTT-T---------------........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................TT-T---------------TCTGTGAACC-------------GCGTTTAACTCTCA...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTTTAACTCTCAGCC................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCCATGAGCACAATATTGGA...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GATTGCACC---------------------------TCCAACTGTC.......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................TTGCACC---------------------------TCCAACTGTCCACGC..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TACATGCAT-----AT--------TTGTTGATAACTGGGGT..........................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................TT-TTTACATGCAT-----AT--------TTG........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCTCAGCCAGCCATGAGCACA...................................2511.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------------GCGTTTAACTCTCAGCCAGCCATGAG.......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TT-T---------------TCTGTGAACC-------------GCGTTTAACTCTC....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACC-------------GCGTTTAACTCTCAGCCAGC.............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGAAAATCTCGGCCATCGAG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCACAATATTGGAGAAAATCTCGGC...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACC-------------GCGTTTAACTCTCAGC.................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACTGTCCACGCGAGAGT............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGG.............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................T--------TTGTTGATAACTGGGGTT-........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------------GCGTTTAACTCTCAGCCAGCCATGAGCC.....................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ACATATCGATTGCACC---------------------------TCCAACTG.........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................T-TTTACATGCAT-----AT--------TTGTTGATAACTGG.............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAAATCTCGGCCATCGAGTCGGA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GATAACTGGGGTT-T---------------TCTGTGAACC-------------G................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCTCGGCCATCGAGTCGGA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TT-T---------------TCTGTGAACC-------------GCGTTTA..........................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCCATGAGCACAATATTGGAG..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-T---------------TCTGTGAACC-------------GCGTTT...........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AGTGTTGGCTAAC----------G-----TTGGGAAT--------------------CGA----------------C............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAACC-------------GCGTTTAACTCTCAGCCAGC.............................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................T-----AT--------TTGTTGATAACTGGG............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGGGGTT-........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATGCAT-----AT--------TTGTTGATAACTGGGGT..........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------------GCGTTTAACTCTCAGCCAGCCATG.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAGCCAGCCATGAGCA.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCATGAGCACAATATTGGA...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AACTGGGGTT-T---------------TCTGTGAACC-------------GCGT.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTGTTGATAACTGGGGT..........................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGGCCATCGAGTCGGAG..2111.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTGGGGTT-T---------------TCTGTGAACC-------------GCGT.............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTCGGCCATCGAGTCGGA...2211.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................T--------TTGTTGATAACTGGGGTT-T---------------TCTGTGA.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................CC---------------------------TCCAACTGTCCACGCGAGAG.............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTCTCAGCCAGCCATGAGCACAAA.................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGATAACTGGGGTT-T---------------TCTGTGAACC-------------.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCAA----TTTTAT----------------------------------------------------------------------------------------T-------A---AAGAATACTATTACGATTTCTTAAGTGCTGGCTAAC----------G-----TTGGGAAT--------------------CAACGA-----TGATGTTGCCACATTACTGG--GAAAA---------------TCGATTGTATCGAATACTTATCGATTGCTCC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGG-GTT-T---------------TCTGTGAACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAGAAAATCTCGGCCATCGAG........2611.0011000000
................................................................................................................................................................................................................................................................................................................................................................ACATGCAT-----AT--------TTGTTGATAACTGG-GT..........................................................................................................2611.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCTGTGAACC-------------GCGTTTAACTGCCAGCC................................................2811.0011000000
...................................................................................................................................................................................................................................................................................................................CAACTGTCCACGCGAGAGT............................................................................................................................................................................1911.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCATGAGCACAATTTTGGA...........................2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGAAAATCTCGGCCATCGAGT.......2511.0011000000
..................................................................................................................................................................................................................................................................................................................................................................ATGCAT-----AT--------TTGTTGATAACTGG-GT..........................................................................................................2411.0010000010
................................................................................................................................................................................................................................................................................TGCTCC---------------------------TCCAACTGTCCACGCG.................................................................................................................................................................................2211.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCTCGGCCATCGAGTCGGA...2311.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGCCAGCCAGCCATGAGC......................................2111.0010001000
droYak3
TACA----TTTTTT----------------------------------------------------------------------------------------G-------A---AGGAATACTATT-ATATTTTTTAAGTGCTGGCTAAC----------G-----TATTGAAC--------------------CAACCA-----TGATGTTGCCACATTGCTGG--AAAAA---------------TCGATTGTATCGACTACATATCGATTGCTCC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATATTTTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGAACC-------------GCGTTTAACTGCCAGC.................................................2611.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCTCGGCCATCGAGTCGGA...2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAATTTTGGAGAAAATCTCGGC...............2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTTGATAACTGGGGTT-T---------------TCTGT...................................................................................2211.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGGAGAAAATCTCGGC...............2111.00100100000000
......................................................................................................................................................................................................................................................................ACATATCGATTGCTCC---------------------------TCCAACTG.........................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCGGCCATCGAGTCGGA...2111.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTTGGAGAAAATCTCGGCC..............2311.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................AT-----AT--------TTGTTGATAACTGGGGT..........................................................................................................2111.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGCCAGCCAGCCATGAGC......................................2211.00100000100000
..........................................................................................................................................................................................................................................................................................................................................................TT-TTTACATGCAT-----AT--------TTGTTGATAACT...............................................................................................................2711.00101000000000
.................................................................................................................................................................................................................................................................................GCTCC---------------------------TCCAACTGTCCACGCGAGA..............................................................................................................................................................................2411.00100010000000
droEug1
GCTA----ATTAGT-----CTAT--------------------------------ACA----------AAAAATAAATAAAAGTAAAAAAAATACTAAG----------------------------------------T----------------------GCGT---------------------------------------T--TGCTGCCACATTTGTGG--GTATA---------------TCGAATATATCGAATACTCATCGTTTACTAT---------------------------TCCAACTGTCCACGCGAGAGTT------TTATTT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAATTGGAGTT-T---------------TTTGTGAACC-------------GAGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droBia1
CGCC---AGTTTTTG-------AATTGCGAACATTTGAGC---------------ACA--------------------------------------------------------------------ACAA----ATAAGTGTTGGCTAACGAAGGC-CA---GCTT---------------------------------------T--TGTTTCCACATTTCGCC--AAGCA---------------TCGAGTGTATCGAATACACATCGATAACTGC---------------------------TCCAACTGTCCACGCGAGAGTT------TCCTAT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGGGGTT-T---------------TTAGTGGACC-------------GCGTATAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droTak1
TTAA----ATT-AT----------------------------------------------------------------------------------------G-------A-----CAAAAATTTA-AGAGC----CAGTGCTGGGTAACGCCTAT-CA---GCCT---------------------------------------T--TATTGCCACATTTCTGC--ACATA---------------TCGATTTAATCGAATACATATCGATTACGGC---------------------------TCCAACTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTATATGCAT-----AT--------CTGTTGATAACTGGGGTT-T---------------TCTGTGAACC-------------GGGGACAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droEle1
GCCA----CTCCTT-----TTAAAT--------------------------------A-----ATACCATTAAATACCAACTA--CTAAATATACTAACC---AAA------------------------TG----CAGTGTTGGTCAATGCTGGC-TG---GCTT---------------------------------------T--TGCTTCC---TTTCGCACA--------------------------------------------C------TGTC-----------------------GCCTGCTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTACATGCCG-----AT--------TTGTTGATTTTTTGGGCT-T---------------TTAGTGGACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droRho1
TAAA----TAATAC-----------------------------------------------------CATAAAATACTAAGAATTTAAAATACACCAAGC---AAA------------------------TG----CAGTGTTGGTCACCACTGGC-CA---GCTT---------------------------------------T--TCTTTCC---TTTTGCACA--------------------------------------------C------TGTC-----------------------GCCTGCTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAATTTGGGTT-T---------------TTAGTGGACC-------------GCCTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droFic1
TTAA----GTTTATGTACTTTAAATTGT---------ACCAAAACATTCATCCATGCAAAGAGATACCATA-----------------AATATACTAAAT---A-------------------------A----CTTAGTGTTG-TTAACGCTGGA-AT---GCTC---------------------------------------T--TCGTTCC---TTTGCAACA--------------------------------------------C------TTTC---------------------GCTCCTGCTGTCCACGCGAGAGTT------TTATAT-TTT-TATT-TTTACATGCAT-----AT--------TTGTTGATAACTGG--TC-C-TGAGCC---------AAGTGAACC-------------GCGTTTAACTGCCAGCCAGCCATGAGCACAATTTTGGAGAAAATCGCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droKik1
CTAC----ATC-------------------------------------------------------------------------------------AAGTGTGACCTGCCGCC-------------ACGAGG----CAGTGTTGGCTAAC----------A-----ATGAG--T--------------------CAA------------------------------AAATATCGATTTATCGATTTTG----GAATCGATT-----TCAGTTCCACCTCTA-------------------------GCCTTGTCCACGCGAGT----------TATTT-TAT-TATT-TAAAC--TAAA-----TT--------TTGTTGATAGCTGGGATC-T--G------------TTAGGGAACC-------------GCACTG--------ACCTGCCATGAGCACAATTTTGGAGAAAATCGCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotal
No Reads
droAna3
ACAC----TATCGA----------------------------------------------------------------------------------------G-------G---AAGAATAATTTG-AAATGTAT---------------------------AATT--------TTATCGATAGTATT-TGTATATAGCTTATTTA--TCGATAT---GTTGGTATT--------------------------------------------TTGGCAA---------------------------CCCTACTCTCCACGCGAGTGCCACAAATCTACTTTATT-TATT-TCTACATGCAT-----TA--------TTGTTGATTTAAAAGTTC-C---------------ATAGAAAGCG-------------GCTTTGATCTAGGACGCCATCATGAGCACGATCTTGGAGAAAATTGCGGCCATCGAGTCCGAGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................TTGTTGATTTAAAAGTTC-C---------------ATAG....................................................................................2311.001010000
............................................................................................................................................................................................................................................................................................................................................................................................GATTTAAAAGTTC-C---------------ATAGAAAGCG-------------GCTTT............................................................2911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAAAGCG-------------GCTTTGATCT.......................................................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCATGAGCACGATCTT..............................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCTAGGACGCCATCATGAGCACGA..................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTTC-C---------------ATAGAAAGCG-------------GCTTT............................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAGGACGCCATCATGAGC......................................2111.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGACGCCATCATGAGC......................................1911.001010000
droBip1
TCGC----TATTGT----------------------------------------------------------------------------------------G-------A---A-TCATAATTTA-AAATGTGT---------------------------CCAT--------TTATCGATAGGTTT-TGTATATCGCTTGATTT--TCGATAT---GTTGATATT--------------------------------------------TTGGCAA---------------------------CCCTACTCTCCACGCGAGTGCCACAAATCTACTTTATT-TATT-TCTACATGAAT-----TT--------TTGTTGATTTAAAAGTTT-T---------------ATAGAAAGCG-------------GCTTTGTCCTGAGACGCCAACATGAGCACAATCTTGGAGAAAATTGCGGCCATCGAGTCCGAGGTSizeHit CountTotal NormTotal
No Reads
dp5
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGTCACAC-T------------------------GCTCCCGTTGTCCACGCGAGTGCC------GTTTTTTTTG-TATTTTTTACGTAAAT-----AT--------TTGATAATAAA---------------------------GTGA-TA------A--AATAAAATTTAGCTGAGATGTAGCCATGAGTACGATTCTGGAGAAAATTTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTACGATTCTGGAGAAAATT....................2320.5010100000000
............................................................................................................................................................................................................................................................................................................................................................TTTTACGTAAAT-----AT--------TTGATAATA..................................................................................................................2320.5010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTACGATTCTGGAGAAAATTTCGGC...............2820.5010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGAGAAAATTTCGGCCATCGAGT.......2620.5010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGAGTACGATTCTG.............................1920.5010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTCTGGAGAAAATTTCGGC...............2220.5010000100000
droPer2
TCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATAC-T------------------------GCT-CCGCTGTCCACGAG----TT------T-------TT-TATT-TTTGTAAAAA----A-AATTTCAAATTATTTGATAATAAAGTTT-T---------------GTTGA---TA------A--AATAAAATTTAGCTGAGACGTAGCCATGAGTACGATTCTGGAGAAAATTTCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................TAATAAAGTTT-T---------------GTTGA---TA------A--AATAAA...............................................................2611.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAGCCATGAGTACGATTCTGG............................2321.002002000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATTCTGGAGAAAATTTCGGC...............2320.501001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAGCTGAGACGTAGCCATGAGTACG...................................2920.501100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAGCTGAGACGTAGCCATGAGTACG...................................2820.501100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGAGTACGATTCTGGA...........................2120.501001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTAGCCATGAGTACG...................................2020.501001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAGCTGAGACGTAGC.............................................1920.501001000
droWil2
TAAA----ATTTGT----------------------------------------------------------------------------------------C-------ACCAATCGATAATTTG-CAATC----------------------------G-----GTTGG--T--------------------CAG------TAA--TCG----------------ACTTA--------TCGGTAATCGGGTGTATTTCTTTGGTATCG------------------------------------GTTGACGTCCACGCGAGAAGT-----TTTTTTT-TTTGTA-T-TTTGTATAAAA----ATA--------TTATAAAT-----------------TTAATTAAATTCTGTTAATT-------------AAA-CTAACCCCTGCTTAGACATGAGTACCATTTTGGAGAAGATTTCGGCTATTGAGTCGGAGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCTTAGACATGAGTACC...................................2013.00330000
...............................................................................................................................................................................................................................................................ATTTCTTTGGTATCG------------------------------------GTTGACGTCCAC....................................................................................................................................................................................2711.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGCTATTGAGTCGGA...1911.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAGAAGATTTCGGCC..............2011.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTACCATTTTGGAGAA........................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................TAATT-------------AAA-CTAACCCCTGCTT................................................2111.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTTCGGCTATTGAGTCGGA...2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCCTGCTTAGACATGAG.......................................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATTTCGGCTATTGAGTCGGAGA.2611.00101000
....................................................................................................................................................................................................................................................................TTTGGTATCG------------------------------------GTTGACGTCCAC....................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................................................TATCG------------------------------------GTTGACGTCCACGCGAGAAGT-----......................................................................................................................................................................2611.00101000
droVir3
TTTA----TCGTTA---------------ACT--------------------------------------------------------------------AGTTAATGCATCC--------------------------------------CTGGAA-TGCATGTTTTGGTATT-TTTCGATAAGTTTACGTA-CGA----------------CTGCAC--CTGT--AAAAA---------------TCGATTTAAT-------------------------ATTATCGCAGTGACGAAGTAT--CGACACTCTCCACGCGAGTTT-----------AT-TTT-CGTT-TCA--ATGTATAAAAATT--------TTGTAAATAGC----GCTCTTTAAATTAACTAAACATT------GGTATTAAACAAC------T---AACGTAGCGGCGATGAGTACAATTCTGGAAAAAATTGCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................T---AACGTAGCGGCGATGAGTACAAT.................................2412.002000000000000000000000000010000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTAAATAGC----GCTCTTTAAAT.................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAC------T---AACGTAGCGGC.............................................1911.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAAAATTGCGGCCATCGAGTCG.....2611.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGCCATCGAGTCG.....1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACAAC------T---AACGTAGCGGCGATGAG.......................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCGGCGATGAGTACAATTCTGGAA..........................2711.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCGGCCATCGAGTCG.....1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAAC------T---AACGTAGCGGCGATGAGT......................................2711.001000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GACACTCTCCACGCGAGTTT-----------AT-TTT-CGTT-TCA--ATG.............................................................................................................................................3511.001000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGAAAAAATTGCGGCCAT............2111.001000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGTGACGAAGTAT--CGACACTCTCCACGCGAGTT.............................................................................................................................................................................3311.001000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................T---AACGTAGCGGCGATGAGTACA...................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------T---AACGTAGCGGCGATGAGTAG....................................2511.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATT------GGTATTAAACAAC------T---AACGTAGCGGC.............................................2811.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGAAAAAATTGCGGCCATCGAG........2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AT--CGACACTCTCCACGCGAGTTT-----------.................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGAAAAAATTGCGGC...............2011.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TTATTCTATATTTTG-------GAGCGCCAGT--------------------------------------------------------------------ATTTTATGCATCC--------------------------------------CTGGTACA---GCTTTTGGTAAT--------------------------------------------------------TT---------------TCGATT-TATCCGATATAAA---------------ATTATCGCAGTGACTCT-TAT--CGGCAGTCTCCACGCGAG--TT------T---AT-TTT-CGTT-TTT-AATGCATTAAAAAT--------TTGTAAATAGT----ACTCATCGATTTGACTTAACTTT------GGCATTAAATAAT------T---AACCCGGAAGCGATGAGTACGATTCTTGAGAAGATTGCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGAGTACGATTCTTGAGAAGAT.....................2611.001000001
..........................................................................................................................................................................................................................................................................................................T-TAT--CGGCAGTCTCCACGCGAG--TT------.....................................................................................................................................................................2411.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................GATTTGACTTAACTTT------GGC............................................................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATTGCGGCCATCGAGTCG.....2311.001000100
.................................................................................................................................................................................................................................................................................................CAGTGACTCT-TAT--CGGCAGTCTCCAC....................................................................................................................................................................................2611.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATTCTTGAGAAGATTGCGGC...............2311.001000001
...............................................................................................................................................................................................................................................................................................CGCAGTGACTCT-TAT--CGGCAGT..........................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATTCTTGAGAAGATTGCGGC...............2511.001100000
......................................................................................................................................................................................................................................................................................................ACTCT-TAT--CGGCAGTCTCCAC....................................................................................................................................................................................2111.001000010
...................................................................................................................................................................................................................................................................................................................GCAGTCTCCACGCGAG--TT------T---A................................................................................................................................................................2011.001100000
droGri2
TGCT----TTTTAA---------------GGT--------------------------------------------------------------------ATTTTGTGCAGCC--------------------------------------CTGCTA-TGG-----TTGGTATT-TCG----------------------------------------------------------------------TGATTGAAT--------TATCGATACTT----T-ATAATCGCCGTGCCGAT-AAT--CACCACTCTCCACGCGAGTTTA------TTTTCT--------T--TTTAATGCATTAAAATT--------TTGTAAATAGC----ACAATTAAAATTAATTAAAGTAC------AATATTAAGAACC------T---AGCGCAGCAGCGATGAGTACCATACTGGAGAAGATTGCGGCCATCGAGTCGGAGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCATACTGGAGAAGATTGCG.................2311.00110

Generated: 05/19/2015 at 12:33 PM