dsi_26026

######################################################################################################################################################################################################################################################################### GCAATGCTGTTCCCTCAAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAAATTAACCGAGATGCCGCCTCCCTGATCAGCACACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGTGATGTGGAGTACAGGCGAATACGTGT *************************************************************.....((((.(((.........))))))).....(((((((((((((........(((....)))..........((((.......))))...))))))))).)))).********************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553485 Chicharo_3 day-old ovaries	M024 male body	M053 female body	SRR618934 dsim w501 ovaries	M023 head	M025 embryo	SRR553486 Makindu_3 day-old ovaries	SRR902008 ovaries	SRR902009 testis	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs
.........................................................................................................................................................CCAGTTGGTCAGTGGAGC..............................................................................................	18	0	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................CCCAGTTGGTCAGTGGAGCGGC...........................................................................................	22	1	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0
.....................................................................................................................................................GAGCCCAGTTGGTCAGTGGAGC..............................................................................................	22	0	1	2.00	2	0	1	0	0	0	1	0	0	0	0	0
..AATGCTGTTCCCTCAAAAGT...................................................................................................................................................................................................................................................	20	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................TGAAGGTCTACGGCCAAATTAACCGAGA..............................................................................................................................................................................	28	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................TCCGTATCTGAAGGTCTACGGCCAAA........................................................................................................................................................................................	26	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................TGGATCACGTGGGTCCGTATCTGAAGGTC..................................................................................................................................................................................................	29	0	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0
............................................................ATCTGAAGGTCTACGGCC...........................................................................................................................................................................................	18	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGCCAGCA.......................................................................................	27	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........CCCTCAAAAGTGGACCTG............................................................................................................................................................................................................................................	18	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
..........TCCCTCAAAAGTGGACCTGTACATCACT...................................................................................................................................................................................................................................	28	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................CAGCAGGCTCTCCTCATGCCCGGCA...................................................................	25	0	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0
.....................TGGACCTGTACATCACTCATGTGGATCA........................................................................................................................................................................................................................	28	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGCC...........................................................................................	23	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................CGAATCAGGAATCTGTTGCC....................................................................................................................................	20	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................GATGTGGAGTACAGGCGGATAC....	22	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................ACGAATCAGGAATCTGTTGCCCACATGC.............................................................................................................................	28	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................TGCCCGGCACATTTTGCATATTCAAGAA................................................	28	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................AGCCCAGTTGGTCAGTGGAGC..............................................................................................	21	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TCAAGAATATCAATGGCCCGGCTCCT.............................	26	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................GCCGCCTCCCTGATCAGCA..........................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..............................................TCACGTGGGTCCGTATCTGAAGGTCT.................................................................................................................................................................................................	26	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
......................................................GTCCGTATCTGAAGG....................................................................................................................................................................................................	15	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................GTTGGTCAGTGGAGCGCCG..........................................................................................	19	1	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................CATTGAGCCCAGTTGGTCAGTG..................................................................................................	22	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........TTCCCTCAAAAGTGGA................................................................................................................................................................................................................................................	16	0	20	0.50	10	0	0	0	10	0	0	0	0	0	0	0
.......................................................TCCGTATCGGAAGGT...................................................................................................................................................................................................	15	1	2	0.50	1	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................GGCTCCTGGTGTCGTGG...................	17	2	15	0.27	4	2	0	0	0	0	0	0	0	0	0	2
............................................................ATCTGAAGGTCGACGACC...........................................................................................................................................................................................	18	2	5	0.20	1	0	0	0	0	0	1	0	0	0	0	0
...........................................................TATCTGAAGATCTACGCC............................................................................................................................................................................................	18	2	6	0.17	1	0	0	0	0	1	0	0	0	0	0	0
.........TTCCCTCAAAAGTGG.................................................................................................................................................................................................................................................	15	0	20	0.10	2	0	0	0	2	0	0	0	0	0	0	0
.....................................................................................CCGAGATGCCGCCGCC....................................................................................................................................................................	16	1	10	0.10	1	0	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................TTTTGCATATCCTAGAATATA............................................	21	3	11	0.09	1	0	0	0	0	0	0	0	0	0	1	0
...............................................CCCGTGGGTCTGTAACTGA.......................................................................................................................................................................................................	19	3	11	0.09	1	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................GGCCTGTTGGTCAGTGG.................................................................................................	17	2	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0

CGTTACGACAAGGGAGTTTTCACCTGGACATGTAGTGAGTACACCTAGTGCACCCAGGCATAGACTTCCAGATGCCGGTTTAATTGGCTCTACGGCGGAGGGACTAGTCGTGTGCTTAGTCCTTAGACAACGGGTGTACGAAACGGTAACTCGGGTCAACCAGTCACCTCGCGGTCGTCCGAGAGGAGTACGGGCCGTGCAAAACGTATAAGTTCTTATAGTTACCGGGCCGAGGACCACTACACCTCATGTCCGCTTATGCACA ********************************************************************************************.....((((.(((.........))))))).....(((((((((((((........(((....)))..........((((.......))))...))))))))).)))).*************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR902009 testis	M023 head
...................................................................................................GTGACTAGTCGTGGGCTT....................................................................................................................................................	18	2	4	0.25	1	1	0	0	0
................................................................................................................................................................................................................................CCGAGCTGAGGACCACTA.......................	18	2	5	0.20	1	0	1	0	0
....................................................................................................................................GGTGTACGAAAGGGT......................................................................................................................	15	1	20	0.15	3	2	1	0	0
...................................................................................................................................GGGTGTACGAAAGGG.......................................................................................................................	15	1	16	0.13	2	2	0	0	0
.............................................................................................................................................................................................................................TTACCAGGCCGAAGACTACT........................	20	3	8	0.13	1	0	0	1	0
........................................................................................................................................TACGAGAAGGTAACTCGG...............................................................................................................	18	2	9	0.11	1	0	1	0	0
.................................................................................................................................AAGGGTGTACGAAAGGGT......................................................................................................................	18	2	12	0.08	1	1	0	0	0
......................................................CCGGCTTAGACTTCCAGC.................................................................................................................................................................................................	18	3	20	0.05	1	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:17626813-17627077 +	dsi_26026	GCAATGCTG---------------------------------TTCCCTCAAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAAATTAACCGAGATGCCGCCTCCCTGATCAGCACACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGTGATGTGGAGTACAGGCGAATACGTGT
droSec2	scaffold_9:398069-398333 +		GCAATGCTG---------------------------------TTCCCTTAAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAAATTAACCGAGATGCCGCCTCCCTGATCAGCACACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGAGATGTGGAGTACAGGCGAATACGTGT
dm3	chr2R:17071607-17071871 +		GCATTGCTC---------------------------------TTCCCTCCAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCACGTTAACCGAGACGCCGCCTCCCTGATCAGCGAACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCCGTGGAGCGCCAACAGGCTCTCCTCATACCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGTGATGTGGAGTACAGGCGGATACGTGT
droEre2	scaffold_4845:11214321-11214585 +		CCAATGGGG---------------------------------GACCCTCAAAAGTGGACCTGTACATCACTCATGTGGATCATGTGGGTCCGTATCTGAAGGTCTACGGCCAGGTAAACCGAGACGCCGCCTTCCTGGTCAGCAAGCGAATCGAGCAGCTTTTGCCCACATGCTTTGCCATAGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTTCTCATGCCCGGCACGTTTTGTGTTTTCAAGAAGACCAATGGCCCGGCTCCTGGTGATGTAGAGTACAGGCGGATACGTGT
droYak3	2R:12124315-12124579 -		CCAATGCGG---------------------------------GACCCTCCAAAGTGGACCTGTTCATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAGGTAAACCGAGACGCCGCCTTCCTGGTCAGCAAGCGAATCGAGCAGCTTTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGTGTTTTCAAGAAGACCAATGGCCCGGCTCCTGGTGATATAGAGTACAGGCGGATACGTGT
droEug1	scf7180000409474:874684-874948 -		CCAATGCGG---------------------------------GTCAATCCAAAATGGACCTATACATCACTCACCTGGATCACGTTGGCCCGTACCTGAAGGTGTACGGCCAGGTTAACAGAGATGCCGCTTTTCTGGTGAGCAAGCACATCGAACAGCTGCTGCCCACATGCTTTGAAATCGAGCCTAGTTGGTCACTGGAGCGCCAGCAGGCTCTTCTTACGCCCGGCACTTTTTGCGTCTTTAAGCGAATCAATGGTCCAGCTCCCGGGGATGTGGAGTACATGCGGACTCGTGT
droBia1	scf7180000302143:1353446-1353710 -		CCAGCGCGG---------------------------------GCCCATCCAAGGTGGACCTGTACATCACGCATGTGGATCACGTGGGGCCCTACCTGAAGGTCTACGGCCAGGTGAACCGGGACGCCGCCTTCCTGGTCAGCAGGCGCATCGAGCAGGTGCTGCCCACATGCTTCGCCATCGAGCCCAGCTGGTCGGTGGAGCGCCAACAGGCCCTCCTCACGCCCGGCACATTTTGCATCTTCAAGAGGACCAACGGCCCGGCTCCGGGCGATGTGGAGTACATGCGGACTCGGGT
droTak1	scf7180000410787:82190-82454 -		CCAATGCGG---------------------------------GGCCATCCAAAGTGGACCTGTACATCACTCACGTGGATCACGTGGGCCCCTACCTGAAGGTCTACGGCCAGGTGAACAGAGACGCCGCCATCCTGGTGAGCAAGCGCATCGAGCAGGTGCTGCCCACATGCTTCGCCATCGAGCCCAGTTGGTCGGTGGAGCGCCAGCAGGCCCTGCTCACTCCGGGCACCTTCTGCATCTTCAAGAAGACCAACGGACCGGCGCCCGGCGATGTGGAGTACATGCGGACACGCGT
droEle1	scf7180000491232:315292-315556 -		CGAATGCGG---------------------------------GTCCTTCGAATGTGGACCTATACATCACCCACCTGGATCACGTGGGCCCGTACCTGAAGGTCTACGGCCAGGTAAACAGAGACGCCGCCTTCCTGGTCAGCAAGCGCATCGAGCAGGTGCTGCCCACATGCTTTGCCATCGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTTCTCACACCCGGCACATTTTGCGTCTTCAAGCGGACGAATGGCCCGGCTCCCGGCGATGTGGAGTACATGAGGACACGTGT
droRho1	scf7180000780219:37838-38102 +		CCAATGCGG---------------------------------GTTCGTCCAATGTGGACCTGTACATCACTCACCTGGACCACGTGGGCCCGTACCTGAAGGTCTGCGGCCAGGTAAACAGAGATGCTGCCTTCCTGGTCAGCAAACGCATTGAGCAGGTGCTGCCCACATGCTTTGCCATCGAGCCCAGTTGGTCGGTGGAGCGCCAGCAGGCTCTTCTTACACCCGGAACATTTTGCGTCTTCAAGAGGACGAATGGCCCGGCTCCTGGCGATGTGGAGTACATGCGGACTCGTGT
droFic1	scf7180000453811:210085-210349 -		CCAAAGCGG---------------------------------GTTCATCCAATGTGGATCTGTACATCACTCACCTGGATCACGTGGGCCCGTACCTGAAGGTCTACGGCCAGGTGAACAGAGACGCCGCCATCCTGGTCAGCAAGCGCATTGAGCAGGTGCTGCCCACATGCTTTGCAATCGAGCCTAGCTGGTCCGTGGAGCGCCAGCAGGCCCTTCTCACGCCCGGCACCTTTTGCGTTTTCAAGAAGATTAATGGTCCGGCTCCCGGCGATGTGGAGTACATGAGGACTCGAGT
droKik1	scf7180000302682:199744-200008 -		CGAGCGTTG---------------------------------GCGCCTCCAAGCTGGATTTATACATTACGCACCTGGATCATGTAGGCCCGTACCTGAAGGTCTACGGCCAGGTCAACCATGATGCCGCCATTCTTGTCAGCAAGGGCATCGAGCAGGTGCTGCCCGCCTGCTTCAGCATTGAGCCCAGTTGGAGCGTGGAGCGCCAACAGGCCCTAGTCACACCCGGCGTCATTTGCGCCTACAAACGGATCAATGGTCCTGCGCCCGGCGATGTGGACTACATGAGGGCCCGTGT
droAna3	scaffold_13266:4844950-4845206 +		A-----------------------------------------GCCCATCAAAGGTGGATCTGTACATCACACACCTGGATCACGTTGGCCCGTACCTGAAGATATACGGCCAGGTCAACAGAGATGCCGCCTTCTTAGTTAGCAAGCGGATCGAGCAGGTGCTGCCCACATGCTTCGCCATCGAGCCAAGCTGGTCTGTGGAGCGCCAGCAGGCGTTGCTCACGCCTGGCACTTTCTGTGTCTTCAAGAGAACAAATGGACCCGCTCCTGGGGATCTGGAGTATATGCGTACCCGGGT
droBip1	scf7180000395751:648959-649215 +		A-----------------------------------------GCCCCTCAAAGGTGGATCTGTACATCACGCACCTGGATCACGTTGGCCCGTACCTGAAGATATACGGCCAGGTCAACAGAGATGCCGCCTTCCTAGTTAGCAAGCGGATAGAGCAGCTGCTGCCCACATGCTTCGCCATCGAGCCAAGCTGGTCGGTGGAACGCCAGCAGGCCTTGCTCACGCCCGGCACCTTCTGTGTCTTCAAGAGGACAAATGGAGCAGCTCCCGGGGATATGGAGTACATGCGTACCCGGGT
dp5	3:3541167-3541431 +		GCGGAGGTA---------------------------------GCAGCTCGATATTGAACCTGCACATTACGCATCTCGATCACATTGGCCCCTATCTGAAGGTCTATGGCCAGATCAATCGCGATGCTGCATTATTGATTACCAAACGCATTGAGAATGTGCTGCCCACATGCTTTGCCATCGAGCCCACATGGTCCATCGAGCGGGTGCAGGCCCTGCTCACCCTCGGCACAGTGTGCGTGTTGAAGCAGACAAACGGGGCAGCTCCCGGGGACACGGAGTACATGCGAGTGCGTGT
droPer2	scaffold_2:3729330-3729594 +		GCGGAGGTA---------------------------------GCAGCTCGATATTGAACCTGCACATTACGCATCTCGATCACGTTGGCCCCTATCTGAAGGTCTATGGCCAGATCAATCGCGATGCTGCATTATTGATTACCAAACGCATTGAGAATGTGCTGCCCACATGCTTTGCCATCGAGCCCACATGGTCCATCGAGCGGGTGCAGGCCCTGCTCACCCCCGGCACAGTGTCCGTGTTGAAGCAGACAAACGGGGCAGCTCCCGGGGACACGGAGTACATGCGAGTGCGTGT
droWil2	scf2_1100000004514:157715-158012 -		CGACTGCGACTGCAGCTGGTGCTGGAGCATCCATGAATGGTGGAGGAGGAGGGACAGACTTATTCATCACCCATATTGATCATGTTGGCCCCTATCTCAAAATCTTTGGCCAGGCGAATCGGGATGCCGCCTTTTTGGTCAGCACACGCATTGAACAGGTGCTGCCCACATGCTTTGCCATTGATCCCTCTTGGTCATTGGAGCGACAGCAAGCTCTTCTCACGCCAAGCACACTTTGCGTATTCAAGCGCACCAAGGGGCCAGCTCCCGGAGATGTGGAATACATGCGAACACGCGT
droVir3	scaffold_12875:14225073-14225317 +		-----------------------------------------------------GTTGATTTGTATATAACGCACCTGGATCATGTTGGACCCTATTTAAAACTATACGGGCAGGCTAATCGGGATGCCGCCTTTCTGGTCAGCACGCGCATCGAGACGCTGCTGCCCACCTGCTTTGCCATAGACCCAAGCTGGTCAAATGAGCGCCAACAGGCGCTTCTCACACCCGGCACCTTTTGTGTCTTCAAGCGGACAAATGGCGCCGCGCCCGGGGATGTGGAGTATATGCGGACGCGTGT
droMoj3	scaffold_6496:9678279-9678546 +		CCGTGACTA------------------------------GTGGCGCATCCAGCCTTGATTTATATGTGACGCACTTGGATCACGTTGGACCCTATTTGAAGCTATATGGGCAGGCCAATCGGGATGCCGCCTTTTTGATCAGCACGCGCATCGAGACGCTGCTGCCCACCTGCTTTGCCATAGACCCAAGTTGGTCAAATGAACGCCAACAGGCCCTGCTCACACCTGGCACCTTTTGTGTATTCAAGCGAACAAATGGCGCTGCACCTGGCGATGTGGAATATATGCGAACGCGTGT
droGri2	scaffold_15245:14202801-14203065 +		ATGGTGGCG---------------------------------GAGCAACCAGCGTTGATTTGTACGTCACGCATCTGGATCATGTTGGCCCCTATCTGAAGGTGTACGGTCAGGCCAATCTGGATGCGGCCCTGATGGTTAGTCAGCGCATCGAGAAATTGCTTCCGACATGCTTTGCCATAGACCCGAGTTGGTCAATTGAGCGCCAACAGGCGCTTCTCACGCCCGGCACATGCTGTGTGCTCAAGCGAAGAAATGGCGCCGCTCCCGGCGACGTGGAATATATGCGAACCCGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GCAATGCTG---------------------------------TTCCCTCAAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAAATTAACCGAGATGCCGCCTCCCTGATCAGCACACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGTGATGTGGAGTACAGGCGAATACGTGT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..........................................................................................................................................................................................CCAGTTGGTCAGTGGAGC..............................................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................GAGCCCAGTTGGTCAGTGGAGC..............................................................................................	22	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AATGCTG---------------------------------TTCCCTCAAAAGT...................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TGAAGGTCTACGGCCAAATTAACCGAGA..............................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................................................TCCGTATCTGAAGGTCTACGGCCAAA........................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................TGGATCACGTGGGTCCGTATCTGAAGGTC..................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................ATCTGAAGGTCTACGGCC...........................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGCCAGCA.......................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................CCCTCAAAAGTGGACCTG............................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TCCCTCAAAAGTGGACCTGTACATCACT...................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CAGCAGGCTCTCCTCATGCCCGGCA...................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
......................................................TGGACCTGTACATCACTCATGTGGATCA........................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGCC...........................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................CGAATCAGGAATCTGTTGCC....................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................ACGAATCAGGAATCTGTTGCCCACATGC.............................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................AGCCCAGTTGGTCAGTGGAGC..............................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TCAAGAATATCAATGGCCCGGCTCCT.............................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................GCCGCCTCCCTGATCAGCA..........................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................................................................TCACGTGGGTCCGTATCTGAAGGTCT.................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GTCCGTATCTGAAGG....................................................................................................................................................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................GTTGGTCAGTGGAGCGCCG..........................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................CATTGAGCCCAGTTGGTCAGTG..................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................TTCCCTCAAAAGTGGA................................................................................................................................................................................................................................................	16	20	0.50	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
..........................................TTCCCTCAAAAGTGG.................................................................................................................................................................................................................................................	15	20	0.10	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0

droSec2

GCAATGCTG---------------------------------TTCCCTTAAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAAATTAACCGAGATGCCGCCTCCCTGATCAGCACACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGAGATGTGGAGTACAGGCGAATACGTGT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........................................................................................................................................................................................................................CTCATGCCCGGCACGTTTTGCAT.........................................................	23	1	1.00	1	1	0	0	0
.............................................................................................................................................GCACACGAATCAGGAATCT..........................................................................................................................................	19	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................TGAGCCCAGTTGGTCAGTGGAGC..............................................................................................	23	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................AGCCCAGTTGGTCAGTGGAGCGCC...........................................................................................	24	1	1.00	1	1	0	0	0
........................................................................................................................................................................................................................................................................CTCCTGGAGATGTGGAGTACAGGCGA........	26	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................GGCCCGGCTCCTGGAGATGTGGA..................	23	1	1.00	1	0	0	1	0
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGC..............................................................................................	20	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................GGCTCCTGGAGATGTGGA..................	18	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................CCAGTTGGTCAGTGGAGC..............................................................................................	18	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................GTGGAGTACAGGCGAATACGTGT	23	1	1.00	1	0	0	1	0
............................................................................................................................TGCCGCCTCCCTGATCAGCACACGA.....................................................................................................................................................	25	1	1.00	1	0	0	1	0
...................................................................................................................................................................................ATTGAGCCCAGTTGGTCAGTGGAGC..............................................................................................	25	1	1.00	1	0	0	1	0
.............................................................................................................................GCCGCCTCCCTGATCAGCA..........................................................................................................................................................	19	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................CCAGTTGGTCAGTGGAGCGC............................................................................................	20	1	1.00	1	0	0	1	0
......................................................................................................................................................................................GAGCCCAGTTGGTCAGTGGAGC..............................................................................................	22	1	1.00	1	0	0	1	0
............................................................................................................................................................................................AGTTGGTCAGTGGAGCGCC...........................................................................................	19	1	1.00	1	1	0	0	0
......................................................................................................................................................................................................................TCTCCTCATGCCCGGCACGTT...............................................................	21	1	1.00	1	0	0	0	1
..............................................................................ATCACGTGGGTCCGTATCTGAAGGTC..................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
................................................................................CACGTGGGTCCGTATCTGAAGG....................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
........................................................................................................................................................AGGAATCTGTTGCCCACATGCTTTGCC.......................................................................................................................	27	1	1.00	1	0	0	1	0
.............................................................................GATCACGTGGGTCCGTATCTGAAGGT...................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................................................................................ATGGCCCGGCTCCTGGAGATGTGGA..................	25	1	1.00	1	0	0	1	0
......................................................................................................................................................TCAGGAATCTGTTGCCCAC.................................................................................................................................	19	1	1.00	1	1	0	0	0

dm3

GCATTGCTC---------------------------------TTCCCTCCAAAGTGGACCTGTACATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCACGTTAACCGAGACGCCGCCTCCCTGATCAGCGAACGAATCAGGAATCTGTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCCGTGGAGCGCCAACAGGCTCTCCTCATACCCGGCACGTTTTGCATATTCAAGAATATCAATGGCCCGGCTCCTGGTGATGTGGAGTACAGGCGGATACGTGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
............................................................................................................................................................................................AGTTGGTCCGTGGAGCGCCAACA.......................................................................................	23	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................ATCAGGAATCTGTTGCCCAC.................................................................................................................................	20	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................GATCAGCGAACGAATCAGGAATCTGT........................................................................................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TATCAATGGCCCGGCTCCTGGTGATG......................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................AGTTGGTCCGTGGAGCGCCAAC........................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................AGTTGGTCCGTGGAGCGCCAA.........................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................CTCCTCATACCCGGCACGTTTTGCAT.........................................................	26	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
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...........................................................................................................................................................AATCTGTTGCCCACATGCTTTGC........................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................TGGTGATGTGGAGTACAGGCGGATA.....	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................GCCATTGAGCCCAGTTGGTCCGTGGAGC..............................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................AGGAATCTGTTGCCCACATG..............................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GTGGATCACGTGGGTCCGTATCTGAAG.....................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................CGTATCTGAAGGTCTACGGCC...........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TGAGCCCAGTTGGTCCGTGGA................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CCACATGCTTTGCCATTGAGCCCAG............................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AGTGGACCTGTACATCACTCATGTGGA...........................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CCAATGGGG---------------------------------GACCCTCAAAAGTGGACCTGTACATCACTCATGTGGATCATGTGGGTCCGTATCTGAAGGTCTACGGCCAGGTAAACCGAGACGCCGCCTTCCTGGTCAGCAAGCGAATCGAGCAGCTTTTGCCCACATGCTTTGCCATAGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTTCTCATGCCCGGCACGTTTTGTGTTTTCAAGAAGACCAATGGCCCGGCTCCTGGTGATGTAGAGTACAGGCGGATACGTGT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...............................................................................................................................................................................................................................................GTTTTCAAGAAGACCAATGGCCCGG..................................	25	1	13.00	13	0	0	0	0	0	0	13
.......................................................................................................................................................................................................................................................GAAGACCAATGGCCCGGCTCCTGGT..........................	25	1	8.00	8	0	0	0	0	0	0	8
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGCCAGCAGG.....................................................................................	29	1	7.00	7	0	0	0	0	0	0	7
.............................................................................................................................................................................................GTTGGTCAGTGGAGCGCCAGC........................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................GAGCAGCTTTTGCCCACATGCTTTGCC.......................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................CTCCTGGTGATGTAGAGT................	18	1	1.00	1	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................GACCAATGGCCCGGCTCCTG............................	20	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................TGGTCAGCAAGCGAATCGAGCAG............................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
..................................................AAAGTGGACCTGTACATCACTCATGTG.............................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
................................................................................................TGAAGGTCTACGGCCAGGTAAAC...................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................GACCAATGGCCCGGCTCCTGGTGATGT.....................	27	1	1.00	1	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................GGTGATGTAGAGTACAGG...........	18	1	1.00	1	0	0	0	0	0	1	0
.............................................................................................................................................................................TTTGCCATAGAGCCCAGTTGGT.......................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGC............................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................GGTCAGCAAGCGAATCGAGC..............................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................GATGTAGAGTACAGGCGGATACGTGT	26	1	1.00	1	0	0	0	0	1	0	0
............................................................................................TATCTGAAGGTCTACGGC............................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................CATAGAGCCCAGTTGGTCAGTGGAGCGC............................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
....................................................................ACTCATGTGGATCATGTGGGTC................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
................................................................................................................................................................................GCCATAGAGCCCAGTTGGTCAGTGGA................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................................................................GGTGATGTAGAGTACAGGCGGA.......	22	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................GTCAGCAAGCGAATCGAGC..............................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................GACCAATGGCCCGGCTCCTGGT..........................	22	1	1.00	1	1	0	0	0	0	0	0
.................................................................ATCACTCATGTGGATCATGTGG...................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................ATAGAGCCCAGTTGGTCAGTGG.................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................TCTTCTCATGCCCGGCACGT................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................CATAGAGCCCAGTTGGTCAGTGGAG...............................................................................................	25	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................................................................................................................TGGTCAGTGGAGCGCCAGCAGGCTCT.................................................................................	26	1	1.00	1	0	0	0	0	0	0	1
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGC..............................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................ATAGAGCCCAGTTGGTCAGT...................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................TCAGTGGAGCGCCAGCAGGCTCTTC...............................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................CAGTGGAGCGCCAGCAGGCT...................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
..............................................................TACATCACTCATGTGGATCATGTGGG..................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................AGTTGGTCAGTGGAGCGCCAGCAGG.....................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................TCTGAAGGTCTACGGCCA..........................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TTTGTGTTTTCAAGAAGACCAATGGCC.....................................	27	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................CCTGGTCAGCAAGCGAATCGAGC..............................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0
........................................................GACCTGTACATCACTCATGTGGATCAT.......................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................TTCCTGGTCAGCAAGCGAATCGAGC..............................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................................................................................CAGCAGGCTCTTCTCATGCCC.......................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.....................................................GTGGACCTGTACATCACTCATGT..............................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................ACGTTTTGTGTTTTCAAGA.................................................	19	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................AGAGCCCAGTTGGTCAGTGGA................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
..........................................GACCCTCAAAAGTGGACCT.............................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
................................................................................................................................................................................................GGTCAGTGGAGCGCCAGC........................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
...................................................................................GTGGGTCCGTATCTGAAGGT...................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................GTGATGTAGAGTACAGGCGG........	20	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................CTGGTGATGTAGAGTACAGGCGGATA.....	26	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................TAGAGCCCAGTTGGTCAGTG..................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
.....................................................................................................................................CCTGGTCAGCAAGCGAATC..................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................GTAGAGTACAGGCGGATACGTG.	22	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................ATGCTTTGCCATAGAGCCCAGTTGGTCA.....................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................TGGTCAGCAAGCGAATCGAGCAGCTTTT.......................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1

droYak3

CCAATGCGG---------------------------------GACCCTCCAAAGTGGACCTGTTCATCACTCATGTGGATCACGTGGGTCCGTATCTGAAGGTCTACGGCCAGGTAAACCGAGACGCCGCCTTCCTGGTCAGCAAGCGAATCGAGCAGCTTTTGCCCACATGCTTTGCCATTGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTCCTCATGCCCGGCACGTTTTGTGTTTTCAAGAAGACCAATGGCCCGGCTCCTGGTGATATAGAGTACAGGCGGATACGTGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................GTGGGTCCGTATCTGAAGGT...................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	1	1	0	0	0	0
.......................................................................................GTCCGTATCTGAAGGTCTAC...............................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................AGCCCAGTTGGTCAGTGGAGCGC............................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................CATTGAGCCCAGTTGGTCAGTGGAGC..............................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TCAAGAAGACCAATGGCCCGGCTCC..............................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................ATGCTTTGCCATTGAGCCCAGTT..........................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAAGAAGACCAATGGCCCGGCTCCTG............................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGC..............................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................GAGCCCAGTTGGTCAGTGGAGC..............................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..AATGCGG---------------------------------GACCCTCCAAAGTGGACCT.............................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................GGCTCCTGGTGATATAGA..................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................GGTCAGTGGAGCGCCAGCAGGCTCTC................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................GTCAGCAAGCGAATCGAGC..............................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CAGCAGGCTCTCCTCATGCCC.......................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TTTGCCATTGAGCCCAGTTGGTCAGTGG.................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................GTAAACCGAGACGCCGCCTTCCT..................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................GTTTTGTGTTTTCAAGAA................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CCAATGGCCCGGCTCCTGG...........................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................ATAGAGTACAGGCGGATACGTGT	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................AGCCCAGTTGGTCAGTGGAGC..............................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................CTTCCTGGTCAGCAAGCGAA....................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................GATCACGTGGGTCCGTATC..........................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CCTCATGCCCGGCACGTTTTGT...........................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TGCCCACATGCTTTGCCATTG...................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................CTACGGCCAGGTAAACCGAGA..............................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................GCCCAGTTGGTCAGTGGAGCGCC...........................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................ATATAGAGTACAGGCGGATACGT..	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................GCCAGCAGGCTCTCCTCATGCCC.......................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................TTCAAGAAGACCAATGGCCCGG..................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................AGACCAATGGCCCGGCTCCTGGTGATATA....................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................CGAGACGCCGCCTTCCTGGT...............................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CCAATGCGG---------------------------------GTCAATCCAAAATGGACCTATACATCACTCACCTGGATCACGTTGGCCCGTACCTGAAGGTGTACGGCCAGGTTAACAGAGATGCCGCTTTTCTGGTGAGCAAGCACATCGAACAGCTGCTGCCCACATGCTTTGAAATCGAGCCTAGTTGGTCACTGGAGCGCCAGCAGGCTCTTCTTACGCCCGGCACTTTTTGCGTCTTTAAGCGAATCAATGGTCCAGCTCCCGGGGATGTGGAGTACATGCGGACTCGTGT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CCAGCGCGG---------------------------------GCCCATCCAAGGTGGACCTGTACATCACGCATGTGGATCACGTGGGGCCCTACCTGAAGGTCTACGGCCAGGTGAACCGGGACGCCGCCTTCCTGGTCAGCAGGCGCATCGAGCAGGTGCTGCCCACATGCTTCGCCATCGAGCCCAGCTGGTCGGTGGAGCGCCAACAGGCCCTCCTCACGCCCGGCACATTTTGCATCTTCAAGAGGACCAACGGCCCGGCTCCGGGCGATGTGGAGTACATGCGGACTCGGGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CCAATGCGG---------------------------------GGCCATCCAAAGTGGACCTGTACATCACTCACGTGGATCACGTGGGCCCCTACCTGAAGGTCTACGGCCAGGTGAACAGAGACGCCGCCATCCTGGTGAGCAAGCGCATCGAGCAGGTGCTGCCCACATGCTTCGCCATCGAGCCCAGTTGGTCGGTGGAGCGCCAGCAGGCCCTGCTCACTCCGGGCACCTTCTGCATCTTCAAGAAGACCAACGGACCGGCGCCCGGCGATGTGGAGTACATGCGGACACGCGT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CGAATGCGG---------------------------------GTCCTTCGAATGTGGACCTATACATCACCCACCTGGATCACGTGGGCCCGTACCTGAAGGTCTACGGCCAGGTAAACAGAGACGCCGCCTTCCTGGTCAGCAAGCGCATCGAGCAGGTGCTGCCCACATGCTTTGCCATCGAGCCCAGTTGGTCAGTGGAGCGCCAGCAGGCTCTTCTCACACCCGGCACATTTTGCGTCTTCAAGCGGACGAATGGCCCGGCTCCCGGCGATGTGGAGTACATGAGGACACGTGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CCAATGCGG---------------------------------GTTCGTCCAATGTGGACCTGTACATCACTCACCTGGACCACGTGGGCCCGTACCTGAAGGTCTGCGGCCAGGTAAACAGAGATGCTGCCTTCCTGGTCAGCAAACGCATTGAGCAGGTGCTGCCCACATGCTTTGCCATCGAGCCCAGTTGGTCGGTGGAGCGCCAGCAGGCTCTTCTTACACCCGGAACATTTTGCGTCTTCAAGAGGACGAATGGCCCGGCTCCTGGCGATGTGGAGTACATGCGGACTCGTGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CCAAAGCGG---------------------------------GTTCATCCAATGTGGATCTGTACATCACTCACCTGGATCACGTGGGCCCGTACCTGAAGGTCTACGGCCAGGTGAACAGAGACGCCGCCATCCTGGTCAGCAAGCGCATTGAGCAGGTGCTGCCCACATGCTTTGCAATCGAGCCTAGCTGGTCCGTGGAGCGCCAGCAGGCCCTTCTCACGCCCGGCACCTTTTGCGTTTTCAAGAAGATTAATGGTCCGGCTCCCGGCGATGTGGAGTACATGAGGACTCGAGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CGAGCGTTG---------------------------------GCGCCTCCAAGCTGGATTTATACATTACGCACCTGGATCATGTAGGCCCGTACCTGAAGGTCTACGGCCAGGTCAACCATGATGCCGCCATTCTTGTCAGCAAGGGCATCGAGCAGGTGCTGCCCGCCTGCTTCAGCATTGAGCCCAGTTGGAGCGTGGAGCGCCAACAGGCCCTAGTCACACCCGGCGTCATTTGCGCCTACAAACGGATCAATGGTCCTGCGCCCGGCGATGTGGACTACATGAGGGCCCGTGT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

A-----------------------------------------GCCCATCAAAGGTGGATCTGTACATCACACACCTGGATCACGTTGGCCCGTACCTGAAGATATACGGCCAGGTCAACAGAGATGCCGCCTTCTTAGTTAGCAAGCGGATCGAGCAGGTGCTGCCCACATGCTTCGCCATCGAGCCAAGCTGGTCTGTGGAGCGCCAGCAGGCGTTGCTCACGCCTGGCACTTTCTGTGTCTTCAAGAGAACAAATGGACCCGCTCCTGGGGATCTGGAGTATATGCGTACCCGGGT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.......................................................................................................................................................................................AGCCAAGCTGGTCTGTGGAGC..............................................................................................	21	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................CTGGTCTGTGGAGCGCCAGCAGGC....................................................................................	24	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................AAGCGGATCGAGCAGGTGCTGC.....................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................CTGGTCTGTGGAGCGCCAGCA.......................................................................................	21	1	1.00	1	0	0	0	1	0	0
...............................................................................................................................................AAGCGGATCGAGCAGGTGCTGCCCACA................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
.........................................................................................................................................GTTAGCAAGCGGATCGAGC..............................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................AATGGACCCGCTCCTGGGGATCTGGAG.................	27	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................................................CACGCCTGGCACTTTCTGTGTCTT......................................................	24	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................AGCGGATCGAGCAGGTGCTGCCC...................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................CTTCTTAGTTAGCAAGCGGATCGAGCA.............................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
......................................................................................................................................................................................................................GTTGCTCACGCCTGGCACTTTC..............................................................	22	1	1.00	1	0	1	0	0	0	0
...............................................TCAAAGGTGGATCTGTACA........................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................................GCCAAGCTGGTCTGTGGAGCGC............................................................................................	22	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................CTTAGTTAGCAAGCGGATCGAGC..............................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................GGATCGAGCAGGTGCTGCCCACATGC.............................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................AAATGGACCCGCTCCTGGGGAT.......................	22	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................GATCGAGCAGGTGCTGCCCACATGCTTC..........................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................GAGCCAAGCTGGTCTGTGGAGCGCC...........................................................................................	25	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................GCCAAGCTGGTCTGTGGAGCGCC...........................................................................................	23	1	1.00	1	0	0	0	0	0	1
...................................................................................GTTGGCCCGTACCTGAAGATATAC...............................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................CGCCTGGCACTTTCTGTGTCTTCAAGA.................................................	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................TACGGCCAGGTCAACAGAGATGCCGCC.......................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................GCCAAGCTGGTCTGTGGAGC..............................................................................................	20	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................................CCACATGCTTCGCCATCGAGCC...............................................................................................................	22	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................AGTTAGCAAGCGGATCGAGCAGGTGC........................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0

droBip1

A-----------------------------------------GCCCCTCAAAGGTGGATCTGTACATCACGCACCTGGATCACGTTGGCCCGTACCTGAAGATATACGGCCAGGTCAACAGAGATGCCGCCTTCCTAGTTAGCAAGCGGATAGAGCAGCTGCTGCCCACATGCTTCGCCATCGAGCCAAGCTGGTCGGTGGAACGCCAGCAGGCCTTGCTCACGCCCGGCACCTTCTGTGTCTTCAAGAGGACAAATGGAGCAGCTCCCGGGGATATGGAGTACATGCGTACCCGGGT	Size	Hit Count	Total Norm	Total
No Reads

dp5

GCGGAGGTA---------------------------------GCAGCTCGATATTGAACCTGCACATTACGCATCTCGATCACATTGGCCCCTATCTGAAGGTCTATGGCCAGATCAATCGCGATGCTGCATTATTGATTACCAAACGCATTGAGAATGTGCTGCCCACATGCTTTGCCATCGAGCCCACATGGTCCATCGAGCGGGTGCAGGCCCTGCTCACCCTCGGCACAGTGTGCGTGTTGAAGCAGACAAACGGGGCAGCTCCCGGGGACACGGAGTACATGCGAGTGCGTGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................GAACCTGCACATTACGCATCTC.............................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CCATCGAGCGGGTGCAGGCCCTGCT..............................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..................................................ATATTGAACCTGCACATTACGCATCTCG............................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......GTA---------------------------------GCAGCTCGATATTGAACCT.............................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................GGCACAGTGTGCGTGTTGAAGCA................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CATCGAGCGGGTGCAGGCCCTGCT..............................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................GCCAGATCAATCGCGATGCTG.........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................ACGGGGCAGCTCCCGGGGAC.......................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.............................................................................GATCACATTGGCCCCTATCTGAAGGTCT.................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CATCGAGCGGGTGCAGGCCCTGC...............................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ACGGGGCAGCTCCCGGGGACACGGAG.................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................GGCCAGATCAATCGCGATGCT..........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................CATGGTCCATCGAGCGGGTG.........................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................TGGCCAGATCAATCGCGATGCTGCA.......................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................CGATATTGAACCTGCACATTACGCAT................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................GCATCTCGATCACATTGGC.................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TTTGCCATCGAGCCCACATGGTC......................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0
............................................................................................TATCTGAAGGTCTATGGCCA..........................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GGCAGCTCCCGGGGACACGGA..................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................AGTGTGCGTGTTGAAGC.................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	1
....................................................ATTGAACCTGCACATTACGCATCTC.............................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................TATCTGAAGGTCTATGGCCAGATCAAT...................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TGAAGCAGACAAACGGGGCAGC.................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............................................................GCACATTACGCATCTCGATC.........................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CCACATGGTCCATCGAGCGGGT..........................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GCGGAGGTA---------------------------------GCAGCTCGATATTGAACCTGCACATTACGCATCTCGATCACGTTGGCCCCTATCTGAAGGTCTATGGCCAGATCAATCGCGATGCTGCATTATTGATTACCAAACGCATTGAGAATGTGCTGCCCACATGCTTTGCCATCGAGCCCACATGGTCCATCGAGCGGGTGCAGGCCCTGCTCACCCCCGGCACAGTGTCCGTGTTGAAGCAGACAAACGGGGCAGCTCCCGGGGACACGGAGTACATGCGAGTGCGTGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................CGATATTGAACCTGCACATTACGC..................................................................................................................................................................................................................................	24	1	8.00	8	8	0	0	0	0	0
....................................................ATTGAACCTGCACATTACGC..................................................................................................................................................................................................................................	20	1	4.00	4	3	1	0	0	0	0
.............................................GCTCGATATTGAACCTGCAC.........................................................................................................................................................................................................................................	20	1	4.00	4	4	0	0	0	0	0
.................................................GATATTGAACCTGCACATTACGC..................................................................................................................................................................................................................................	23	1	3.00	3	3	0	0	0	0	0
......GTA---------------------------------GCAGCTCGATATTGAACCT.............................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
................................................................................CACGTTGGCCCCTATCTGA.......................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
.......................................................................................................CTATGGCCAGATCAATCGCGAT.............................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
........................................................................ATCTCGATCACGTTGGCCCCTATCTGAAG.....................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.......................................................................................GCCCCTATCTGAAGGTCTAT...............................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.......................................................................................................CTATGGCCAGATCAATCGC................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................CGGCACAGTGTCCGTGTTGAAGCA................................................	24	1	1.00	1	0	1	0	0	0	0
.............................................................................................ATCTGAAGGTCTATGGCCAG.........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
............................................AGCTCGATATTGAACCTG............................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.............................................................GCACATTACGCATCTCGATCACGTTGGC.................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0
..........................................................................CTCGATCACGTTGGCCCCTATCTGAAGGT...................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0

droWil2

CGACTGCGACTGCAGCTGGTGCTGGAGCATCCATGAATGGTGGAGGAGGAGGGACAGACTTATTCATCACCCATATTGATCATGTTGGCCCCTATCTCAAAATCTTTGGCCAGGCGAATCGGGATGCCGCCTTTTTGGTCAGCACACGCATTGAACAGGTGCTGCCCACATGCTTTGCCATTGATCCCTCTTGGTCATTGGAGCGACAGCAAGCTCTTCTCACGCCAAGCACACTTTGCGTATTCAAGCGCACCAAGGGGCCAGCTCCCGGAGATGTGGAATACATGCGAACACGCGT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.......................................................................................................................................................................................ATCCCTCTTGGTCATTGGAG...............................................................................................	20	1	2.00	2	0	0	2	0	0
...............................................................................................................................................................................................................................................GTATTCAAGCGCACCAAGGGGCCA...................................	24	1	2.00	2	0	0	1	1	0
.......................................................................................................CTTTGGCCAGGCGAATCGGGA..............................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
..................................GAATGGTGGAGGAGGAGGGACA..................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1
.....................................................................................................................................................................................................................................................................CAGCTCCCGGAGATGTGGA..................	19	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................GCTCCCGGAGATGTGGAAT................	19	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................ATTGGAGCGACAGCAAGCT...................................................................................	19	1	1.00	1	0	0	0	1	0
................................................................................................TCAAAATCTTTGGCCAGGCGAATCGGGA..............................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
..........................................................................ATTGATCATGTTGGCCCC..............................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.........................AGCATCCATGAATGGTGGAGGAGGA........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................TGCCCACATGCTTTGCCATTGATCCCTCT...........................................................................................................	29	1	1.00	1	0	1	0	0	0
.......................................................................................................CTTTGGCCAGGCGAATCGGGATGCCGC........................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................GCACACTTTGCGTATTCAAGCG................................................	22	1	1.00	1	0	0	1	0	0
...........................................................................................................................................CAGCACACGCATTGAACAG............................................................................................................................................	19	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................................GTATTCAAGCGCACCAAGGGGC.....................................	22	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................CTCTTGGTCATTGGAGCGACAGCA.......................................................................................	24	1	1.00	1	0	0	0	0	1
..........................................................................................................................................................................TGCTTTGCCATTGATCCCTCTTGG........................................................................................................	24	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................TGCTTTGCCATTGATCCCTCTTGGTCAT....................................................................................................	28	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................GGCCAGCTCCCGGAGATGTGGA..................	22	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................ATTGGAGCGACAGCAAGCTC..................................................................................	20	1	1.00	1	1	0	0	0	0
......................................................................................................................................................................................................................................ACACTTTGCGTATTCAAGCG................................................	20	1	1.00	1	0	0	0	1	0
................................ATGAATGGTGGAGGAGGAGGGACAGA................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................AAGGGGCCAGCTCCCGGAGATGT.....................	23	1	1.00	1	0	0	1	0	0
..................................GAATGGTGGAGGAGGAGGGA....................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................GGTCATTGGAGCGACAGCAAG.....................................................................................	21	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................GATGTGGAATACATGCGAACACGC..	24	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................................CATTGGAGCGACAGCAAGCT...................................................................................	20	1	1.00	1	0	0	1	0	0
.....................................................................................................ATCTTTGGCCAGGCGAATCGGGATGCCGC........................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................GCTCCCGGAGATGTGGAATACATGCGAA.......	28	1	1.00	1	1	0	0	0	0
......................................................................................................................................................................................................................................................................AGCTCCCGGAGATGTGGAATACATGC..........	26	1	1.00	1	0	0	1	0	0
.................................................................................................................GCGAATCGGGATGCCGCC.......................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
....................................................................................................................................TTTTGGTCAGCACACGCATTGAACA.............................................................................................................................................	25	1	1.00	1	1	0	0	0	0
......................................................................................................................................................................................GATCCCTCTTGGTCATTGGA................................................................................................	20	1	1.00	1	1	0	0	0	0
.................................................................................................................................................................................................GTCATTGGAGCGACAGCAAGCT...................................................................................	22	1	1.00	1	0	0	0	1	0
...............................................GGAGGGACAGACTTATTCAT.......................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................GATCCCTCTTGGTCATTGGAGCGA............................................................................................	24	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................................................................AGCGCACCAAGGGGCCAGCTCCCGGA..........................	26	1	1.00	1	0	0	0	1	0
.....................CTGGAGCATCCATGAATGGTGGA..............................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................GCTCCCGGAGATGTGGAATACATGC..........	25	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................ATGCTTTGCCATTGATCCCTCTTGGT.......................................................................................................	26	1	1.00	1	0	0	0	1	0

droVir3

-----------------------------------------------------GTTGATTTGTATATAACGCACCTGGATCATGTTGGACCCTATTTAAAACTATACGGGCAGGCTAATCGGGATGCCGCCTTTCTGGTCAGCACGCGCATCGAGACGCTGCTGCCCACCTGCTTTGCCATAGACCCAAGCTGGTCAAATGAGCGCCAACAGGCGCTTCTCACACCCGGCACCTTTTGTGTCTTCAAGCGGACAAATGGCGCCGCGCCCGGGGATGTGGAGTATATGCGGACGCGTGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...................................................................AACGCACCTGGATCATGTTGGACCC..............................................................................................................................................................................................................	25	1	3.00	3	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................CTGGTCAGCACGCGCATCGAGACGCT..........................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................GCCCGGGGATGTGGAGTA...............	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................TAACGCACCTGGATCATGTTGGACCC..............................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................GCACCTGGATCATGTTGGACC...............................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1
...................................................................................................................................................................................ATAGACCCAAGCTGGTCAAATGAGCGC............................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................GCCAACAGGCGCTTCTCACACCCGGC....................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................GGTCAAATGAGCGCCAACAGGCG...................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................TATACGGGCAGGCTAATCGGGA..............................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................AACGCACCTGGATCATGTTGGACCCTA............................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTCTGGTCAGCACGCGCA....................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................ATATAACGCACCTGGATCATGTTGGAC................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CAACAGGCGCTTCTCACACCC.......................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TCTGGTCAGCACGCGCATCGA................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CAAATGGCGCCGCGCCCGG...........................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................TAACGCACCTGGATCATGTTGGACC...............................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................TGGTCAGCACGCGCATCGAGACGCTGC........................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................ATATAACGCACCTGGATCATGTTGGACC...............................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................CGCACCTGGATCATGTTGGA.................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TGTTGGACCCTATTTAAAACT...................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................ATTTAAAACTATACGGGCA..........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................TTGCCATAGACCCAAGCTGGT.......................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................GATGTGGAGTATATGCGGACGCGTGT	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................TGGCGCCGCGCCCGGGGATGTGGA..................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................................................AAATGGCGCCGCGCCCGGGGA........................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................AACGCACCTGGATCATGTTGGACC...............................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................CAGGCTAATCGGGATGCCGCCT......................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................CGGACAAATGGCGCCGCGCC..............................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCTGGTCAAATGAGCGCCAAC........................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................GGTCAAATGAGCGCCAACAGGC....................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTCTGGTCAGCACGCGCATCGAGACGC...........................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................GTGGAGTATATGCGGACGC....	19	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................AGCACGCGCATCGAGACGCTG.........................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................ATATAACGCACCTGGATCATGT.....................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................GGCGCTTCTCACACCCGGCACCTTTT.............................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................CATGTTGGACCCTATTTAAAA.....................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................CCTTTTGTGTCTTCAAGCGGACAAAT.........................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................ACCCAAGCTGGTCAAATGA................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................CGGGGATGTGGAGTATATGCGGACGCG...	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................ACGCACCTGGATCATGTTGGACCC..............................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GGAGTATATGCGGACGCGTGT	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................GTATATAACGCACCTGGATCATGTT....................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................ATAGACCCAAGCTGGTCAAATGAG...............................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................AGACCCAAGCTGGTCAAATGAGCGC............................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................AGGCTAATCGGGATGCCGCCTTTCT..................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................CCGGCACCTTTTGTGTCTTCAAGCGGACA............................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................................GCTAATCGGGATGCCGCC.......................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................GATGTGGAGTATATGCGGAC......	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................CGGGATGCCGCCTTTCTGGTC..............................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................TATAACGCACCTGGATCATGTTGGACCC..............................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................TAACGCACCTGGATCATGTTGGACCCTA............................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................TGGACCCTATTTAAAACTATACGG.............................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TCTGGTCAGCACGCGCATCGAG...............................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................CAACAGGCGCTTCTCACACCCGGCACC.................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................TGTGTCTTCAAGCGGACAAATGGCGC....................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCTGGTCAAATGAGCGCCAACAG......................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................TTGTGTCTTCAAGCGGACAAATG........................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................GACCCAAGCTGGTCAAATGAGCGC............................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................AAATGGCGCCGCGCCCGGGG.........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGTATATGCGGACGCGTGT	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TTCAAGCGGACAAATGGC......................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................................................................GCGCTTCTCACACCCGGCACCTTTTGTGT.........................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................CACACCCGGCACCTTTTGTGT.........................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................GCACGCGCATCGAGACGCTG.........................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................ACGCACCTGGATCATGTTGGACCCTATTTAA.......................................................................................................................................................................................................	31	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................AGCGGACAAATGGCGCCGCGCCCGGGGA........................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................CTTCAAGCGGACAAATGG.......................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CCGTGACTA------------------------------GTGGCGCATCCAGCCTTGATTTATATGTGACGCACTTGGATCACGTTGGACCCTATTTGAAGCTATATGGGCAGGCCAATCGGGATGCCGCCTTTTTGATCAGCACGCGCATCGAGACGCTGCTGCCCACCTGCTTTGCCATAGACCCAAGTTGGTCAAATGAACGCCAACAGGCCCTGCTCACACCTGGCACCTTTTGTGTATTCAAGCGAACAAATGGCGCTGCACCTGGCGATGTGGAATATATGCGAACGCGTGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..........................................................................................................................GATGCCGCCTTTTTGATCAGCACGCGC.....................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................TTGTGTATTCAAGCGAACAAATGGC......................................	25	1	1.00	1	1	0	0	0	0	0
.......TA------------------------------GTGGCGCATCCAGCCTTGA................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................GCCCTGCTCACACCTGGC....................................................................	18	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................AACAAATGGCGCTGCACCT.............................	19	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................TGCCATAGACCCAAGTTGGT.......................................................................................................	20	1	1.00	1	1	0	0	0	0	0
....................................................................................................GCTATATGGGCAGGCCAATCGG................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
..........................................GCGCATCCAGCCTTGATTTATATGT.......................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................GCATCGAGACGCTGCTGC.....................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..GTGACTA------------------------------GTGGCGCATCCAGCCTTG.................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GCACCTGGCGATGTGGAATATATGC..........	25	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................CGAGACGCTGCTGCCCAC.................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................GTATTCAAGCGAACAAATG........................................	19	1	1.00	1	0	0	0	1	0	0
....................................................................................................................................................................................................................GCCCTGCTCACACCTGGCACC.................................................................	21	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................CGCTGCTGCCCACCTGCTT...........................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................ATCGAGACGCTGCTGCCCACCTGCTTT..........................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................TTTGCCATAGACCCAAGTTGG........................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................GGCGATGTGGAATATATGCGAACGC....	25	1	1.00	1	0	0	1	0	0	0
...................................................................................................................................................................................................CAAATGAACGCCAACAGGCCCTGC...............................................................................	24	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................GCCCACCTGCTTTGCCATAG...................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................GATGTGGAATATATGCGAACGCGT..	24	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................................................GAACGCCAACAGGCCCTGCTC.............................................................................	21	1	1.00	1	1	0	0	0	0	0
..........................................................TTTATATGTGACGCACTTG.............................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................GCTGCACCTGGCGATGTG....................	18	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................CTTTTTGATCAGCACGCGC.....................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....................................................................................................GCTATATGGGCAGGCCAATC..................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0

droGri2

ATGGTGGCG---------------------------------GAGCAACCAGCGTTGATTTGTACGTCACGCATCTGGATCATGTTGGCCCCTATCTGAAGGTGTACGGTCAGGCCAATCTGGATGCGGCCCTGATGGTTAGTCAGCGCATCGAGAAATTGCTTCCGACATGCTTTGCCATAGACCCGAGTTGGTCAATTGAGCGCCAACAGGCGCTTCTCACGCCCGGCACATGCTGTGTGCTCAAGCGAAGAAATGGCGCCGCTCCCGGCGACGTGGAATATATGCGAACCCGTGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.............................................................................................................TCAGGCCAATCTGGATGCG..........................................................................................................................................................................	19	1	1.00	1	1	0
.............................................................................................................TCAGGCCAATCTGGATGCGGCCC......................................................................................................................................................................	23	1	1.00	1	1	0
...........................................................................................................................................................AAATTGCTTCCGACATGCTTTGC........................................................................................................................	23	1	1.00	1	1	0
..................................................................................................AAGGTGTACGGTCAGGCCA.....................................................................................................................................................................................	19	1	1.00	1	0	1
..................................................................................................................CCAATCTGGATGCGGCCCTGATGGT...............................................................................................................................................................	25	1	1.00	1	1	0
...........................................................................................................................................................................................GAGTTGGTCAATTGAGCGCC...........................................................................................	20	1	1.00	1	1	0
.....................................................................................................................................................................CGACATGCTTTGCCATAGA..................................................................................................................	19	1	1.00	1	1	0
.......................................................................................................................................................................ACATGCTTTGCCATAGACC................................................................................................................	19	1	1.00	1	1	0
.................................................................................................................................................................................................................CAGGCGCTTCTCACGCCCGGCACATGCT.............................................................	28	1	1.00	1	1	0
...................................................................................................................................................................TCCGACATGCTTTGCCATAGACCCG..............................................................................................................	25	1	1.00	1	1	0
.......................................................................................................................................................................................ACCCGAGTTGGTCAATTGAGC..............................................................................................	21	1	1.00	1	0	1

dsi_26026

2r:17626863-17627027 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-26.5	-26.5	-26.4