ID:

dsi_25969

 Coordinate:

x:7875004-7875153 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.1 -7.5 -7.3 -7.3

Flybase annnotation

Antisense to intron [x_7874350_7874992_-]; Antisense to exon [x_7874993_7875698_-]; Antisense to three_prime_UTR [x_7874993_7875343_-]

No Repeatable elements found

Sense Strand Reads

TCTGGTAGCGAAACAACAACAACAACTACTACTACTCACACTTAACAACAGTACGAACGAAATAACAATGCCGTCGACGCAGCGCCGAAACGCAGATATAATATTTTGTTTAGTTAATTCTTTTGGAGCAAGCAAGTTCTTAAGCGATCGAAAAATAAATGAAATGCAGCCGCCGCACAACATGATATGCAGATTAATTTAAACAAAAAGCGATCGAACTACCGCGGGCGGGGGTTATTTTTACCACTAT
************************************************************.........((.............((((((.(((((........)))))...........)))))).))************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR902008
ovaries
 O001
Testis
 M024
male body		 O002
Head
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 GSM343915
embryo
............................................................AATAACAATGCCGTCGACGCA......................................................................................................................................................................... 21 0 1 18.00 18 1 5 6 2 0 0 0 0 0 2 2 0 0
...................................................................ATGCCGTCGACGCAGCGCCGA.................................................................................................................................................................. 21 0 1 7.00 7 3 4 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TTTAGTTAATTCTTTTGGAGC......................................................................................................................... 21 0 1 5.00 5 0 0 2 2 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TAAACAAAAAGCGATCGAACT.............................. 21 0 1 4.00 4 0 0 0 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................TTAAACAAAAAGCGATCGAAC............................... 21 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0 0
........................................CTTAACAACAGTACGAACGAA............................................................................................................................................................................................. 21 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGAACTACCGCGGGCGGGGG................ 21 0 1 3.00 3 0 0 0 0 0 0 0 0 2 0 0 1 0
..................................................................................................................................................................................................................CGATCGAACTACCGCGGGCGG................... 21 0 1 3.00 3 0 0 1 0 1 0 0 0 1 0 0 0 0
...........................................................AAATAACAATGCCGTCGACGC.......................................................................................................................................................................... 21 0 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGCGATCGAACTACCGCGGGC..................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AGTAACAATGCCGTCGACGCA......................................................................................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATCGAACTACCGCGGGCGGGGTT............... 23 1 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
.............................................CAACAGTACGAACGAAATAAC........................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AATTTAAACAAAAAGCGATCGA................................. 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AAATGAAATGCAGCCGCCGCA......................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................GAAATAACAATGCCGTCGACGT.......................................................................................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAGCGATCGAACTACCGCGG....................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAACTACCGCGGGCGGGGGTT.............. 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AACAAAAAGCGATCGAACT.............................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TTAATTCTTTTGGAGCAAGCA.................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................ATAACAATGCCGTCGACGCA......................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGAAATAACAATGCCGTCGAC............................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................ATGCAGCCGCCGCACAACATG.................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................ATAACAATGCCGTCGACG........................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................TACGAACGAAATAACAATGCC.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AGCAGGTTCTTGAGCGATCGA................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGCGATCGAACTGCCGCGGGC..................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................AAATAACAATGCCGTGGACGC.......................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................TTAACAGCAGTACGAACGAAAT........................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATTAATTTAAACAAAAAGCG...................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................AAACAAAAAGCGATCGAAC............................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAAAGCGATCGAACTACCG.......................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................ACAACGGTACGAACGAAATAA......................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGAATGAAATGCAGCCGCCGCA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGCAGATTAATTTAAACAAAA.......................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................TTCTTAAGCGATCGAAAAATA............................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTACGAACGAAATAACAATGC................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AGTTCTTAAGCGATCGAAAA................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AAGTAACAATGCCGTCGACGC.......................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................GTTCTTGAGCGATCGAAAAATG............................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TTAACAACAGTACGAACGAAA............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTTCTTAAGCGATCGAAAAA............................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGATCGAACTACCGCGGGCGGT.................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CACAACATGATATGCAGATTA...................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAAAGCGATCGAACTACCGCG........................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAAAGCGATCGAACTACCGCG........................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AATTTAAACAAAAAGCGA..................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................AATGCCGTCGACGCAGCGCCT................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................AATGCCGTCGACGCA......................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGACGCAGCGCCGAAACGCAG........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTTAATTCTTTTGGAGC......................................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................TAACAATGCCGTCGACGCAGC....................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TTAACAGCAGTACGAACGAAGT........................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ACAATGCCGTCGACGCAGCGCC.................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TAATTCTTTTGGAGCAGGCAA................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ACGAACGAAATAACAATGCCG................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGACGCAGCGCCGAAGCGCAG........................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................GTCGACGCAGCGCCGAAGCGC............................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAACTACCGCGGGCGGGG................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................CGAACTACCGCGGGCGGGGGTT.............. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AATAAATGAAATGCAGCCGCC............................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TTTAGTTAATTCTTTTGAAGCT........................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CAAAAAGCGATCGAACTACC........................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................CAACATGATATGCGGATTAAT.................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATTTAAACAAAAAGCGATCGA................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CGCAGCGCCGAAACGCAGAT......................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAGCGATCGAACTACCGC......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAACTACCGCGGGCGGGGG................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................AATTCTTTTGGAGCAAGCAGG.................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GATTTAAACAAAAAGCGATCG.................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCAAGCAAGTTCTTAAGCGATCG.................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................CAGCGCCGAAACGCAGATAT....................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................ATAATGCCGTCGACGCAGCGC..................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CAAAAGGCGATCGAGCTACCGC......................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................CACACTTAACAACAGTACGA.................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TAATATTTTGTTTAGTTAATT................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................GAAATAACAATGCCGTCGACGCAGCGC..................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................CCGAAACGCAGATATAATATTTT............................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CAGATATAATATTTTGTTTAG......................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AAGTTCTTAAGCGATCGA................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AATGCCGTCGACGCAGCGCCGA.................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................AATGCCGTCGACGCAGCGCCG................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CGCAGCGCCGAAACGCAGATA........................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAACAAAAAGCGATCGAACTA............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AGCAGGCAAGTTCTTAAGCG........................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................GTCGACGGAGCGCCGAAACGC............................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGAACTACCGCGGGCGGGGGT............... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAACTACCGCGGGCGGGGGT............... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GAAATGCAGCCGCCGCACAAC..................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................TAAGCGATCGAAAAATAAATG......................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGATCGAACTACCGCGGGCGGG.................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAGCGATCGAAAAATAAATG......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AGCAAGTTCTTAAGCGATCGA................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................AAATGAAGTGCAGCCGCCGCA......................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCACAACATGATATGCAGA......................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AAGCGATCGAAAAATAAA........................................................................................... 18 0 2 1.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GATCGAACTACCGCGGGCGGGT................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GCAAGTTCTTAAGCGATCGAA.................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AATGAAATGCAGCCGCCGCAC........................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTACGAACGAAATAACAAT..................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................TTAACAACAGTACGAACGAA............................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AGCAGGTTCTTGAGCGATC..................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AGCGCGGATGTAATATTTTGTT............................................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........AACAACAACAACAACTACT............................................................................................................................................................................................................................ 19 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................CACAACAAGATATGAAGAT........................................................ 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................GGCTGGGGTTAGTTTTAC...... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GTACTACCCCGGGCGG................... 16 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTTAAGCGATGGAAGAGTA............................................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................GCGAGGGTTAGTTTTAC...... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATATTTTGTTTAGTT....................................................................................................................................... 16 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AAGCGATCGAAAGAT.............................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

---------------------------------------###################################################################################################################################################################################################################
AGACCATCGCTTTGTTGTTGTTGTTGATGATGATGAGTGTGAATTGTTGTCATGCTTGCTTTATTGTTACGGCAGCTGCGTCGCGGCTTTGCGTCTATATTATAAAACAAATCAATTAAGAAAACCTCGTTCGTTCAAGAATTCGCTAGCTTTTTATTTACTTTACGTCGGCGGCGTGTTGTACTATACGTCTAATTAAATTTGTTTTTCGCTAGCTTGATGGCGCCCGCCCCCAATAAAAATGGTGATA
*************************************************************************************************************************.........((.............((((((.(((((........)))))...........)))))).))************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 M053
female body
 O001
Testis
 O002
Head
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
...............................................................................................................................CGTTCGTTCAAGAATTCGCTA...................................................................................................... 21 0 1 15.00 15 8 2 2 0 1 2 0 0 0 0 0 0 0 0
..................................................................................GCGGCTTTGCGTCTATATTAT................................................................................................................................................... 21 0 1 13.00 13 5 3 0 0 4 1 0 0 0 0 0 0 0 0
......................................................................................................................................TCAAGAATTCGCTAGCTTTTT............................................................................................... 21 0 1 11.00 11 6 1 0 0 1 3 0 0 0 0 0 0 0 0
.................................................TCATGCTTGCTTTATTGTTAC.................................................................................................................................................................................... 21 0 1 10.00 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTTTTTCGCTAGCTTGATG............................ 21 0 1 8.00 8 2 2 3 0 1 0 0 0 0 0 0 0 0 0
.......................................................................GCAGCTGCGTCGCGGCTTTGC.............................................................................................................................................................. 21 0 1 8.00 8 0 0 5 0 0 0 0 2 0 0 0 0 1 0
................................................GTCATGCTTGCTTTATTGTTA..................................................................................................................................................................................... 21 0 1 6.00 6 2 1 0 1 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................................................GTCGGCGGCGTGTTGTACTAT............................................................... 21 0 1 6.00 6 0 0 0 3 0 1 2 0 0 0 0 0 0 0
.......................................................................................................................................................................TCGGCGGCGTGTTGTACTATA.............................................................. 21 0 1 6.00 6 0 1 1 0 3 0 1 0 0 0 0 0 0 0
....................................GTGTGAATTGTTGTCATGCTT................................................................................................................................................................................................. 21 0 1 5.00 5 2 0 0 2 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCTAGCTTTTTATTTACTT....................................................................................... 21 0 1 4.00 4 0 1 0 0 1 1 0 1 0 0 0 0 0 0
...................................................................................CGGCTTTGCGTCTATATTATA.................................................................................................................................................. 21 0 1 4.00 4 0 2 0 0 0 0 0 0 0 0 2 0 0 0
.........................................................................................................................................TGAATTCGCTAGCTTTTTA.............................................................................................. 19 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCGTTCAAGAATTCGCTAGCT................................................................................................... 22 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0
........................................GAATTGTTGTCATGCTTGCTTT............................................................................................................................................................................................ 22 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTTCAAGAATTCGCTAGCTT.................................................................................................. 21 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CGGCAGCTGCGTCGCGGCTTT................................................................................................................................................................ 21 0 1 3.00 3 0 0 1 0 0 1 0 1 0 0 0 0 0 0
......................................................................................................................................TCAAGAATTCGCTAGCTTTT................................................................................................ 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATGCTTGCTTTATTGTTAC.................................................................................................................................................................................... 21 1 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCGTTCAAGAATTCGCTAGC.................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGGCGGCGTGTTGTACTATAC............................................................. 21 0 1 3.00 3 0 1 0 0 1 0 1 0 0 0 0 0 0 0
...................GTTGTTGATGATGATGAGTGT.................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0
..............................................TTGTCATGCTTGCTTTATTGTT...................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................ACTTTACGTCGGCGGCGTGTT...................................................................... 21 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................CTAGCTTTTTATTTACTTTAC.................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TTGTTGTCATGCTTGCTTTA........................................................................................................................................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTTGTACTATACGTCTAATTA.................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................CTCGTTCGTTCAAGAATTCGCT....................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GTTGGTGATGATGAGTGTGAA............................................................................................................................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ACGTCGGCGGCGTGTTGTACT................................................................. 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................TGTTGTCATGCTTGCTTTATT......................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................TCGTTCGTTCAAGAATTCGCT....................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TTGTCATGCTTGCTTTATTGT....................................................................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................TTGATGATGATGAGTGTGAAT.............................................................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................ATGATGAGTGTGAATTGTTGT........................................................................................................................................................................................................ 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................TTTACTTTACGTCGGCGGCGT......................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTTTTTCGCTAGCTTGATGG........................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTTTTTCGCTAGCTTGATGG........................... 21 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................GTACTATACGTCTAATTAAAT................................................. 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................ATGAGTGTGAATTGTTGTCAT..................................................................................................................................................................................................... 21 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................ATTGTTACGGCAGCTGCGTCG....................................................................................................................................................................... 21 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................TTGTTGTCATGCTTGCTTTAT.......................................................................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................GCGTCGCGGCTTTGCGTCTAT........................................................................................................................................................ 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGCTAGCTTTTTATTTACTT....................................................................................... 20 0 3 1.33 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0
..........................................................................................GCGTCTATATTATAAAACAAA........................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................TTTTCGGCGGCGTGTTGTACTATA.............................................................. 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................GGCTTTGCGTCTATATTATAA................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................TTGCGTCTATATTATAAAACA............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................GTGAATTGTTGTCATGCTTGC............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.GACCGTCGCTTTGTTGTTGT..................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GGCGCCCGCCCCCAATAAAAA........ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................ATTCGCTAGCTTTTTATTTAC......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................ACATGCTTGCTTTATTGTTACG................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCGTTCGTTCAAGAATTCGCTAGCT................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TTTACGTCGGCGGCGTGTTGT.................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CCTCGTTCGTTCAAGAATTCG......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGCGTGTTGTACTATACGTC.......................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................TACGTCTAATTAAAT................................................. 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCTAGCTTTTTATATACTT....................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CCTCGTTCGTTCAAGAATTCGC........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCGTTCAAGAATTCGCTA...................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................CTCGTTCAAGAATTCGCTAGC.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CCGTTCGTTCAAGAATTCGCTA...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GGCAGCTGCGTCGCGGCTTTG............................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTCGCGGCTTTGCGTCTATAT...................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................GTTTTTCGCTAGCTTGATGG........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................GAGTTGTTGTCATGCTTGC............................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TTGATGATGATGAGTGTGAGT.............................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................TTGTTGTTGATGATGATGAGT.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TTTGTTTTTCGCTAGCTTGAT............................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................GGCAGCTGCGTCGCGGCTTT................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CCAAGAATTCGCTAGCTTTTTA.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCTAGCTTTTTATTTAC......................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................TCATGCTTGCTTTATTCTTAC.................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GGCGGCGTGTTGTACTATA.............................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TGCGGCGTGTTGTACTATACGT........................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TCAAGAATTCGCTAGCTTTTTA.............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATCGCTTTGTTGTTGTTGTTG................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTTTTTCGCTAGCTTGGT............................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GAATTCGCTAGCTTTTTATT............................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGCTAGCTTTTTATTTACTTT...................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................ACCTCGTTCGTTCAAGGATTCG......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CGTTCGTTCAAGAATTCGCTAGCT................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................GTCATGCTTGCTTTATTGTT...................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCGTTCGTTCAAGAATTCGC........................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GCGTCTATATTATAAAAC.............................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TCGTTCAAGAATTCGCTAGCT................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTTTTTCGCTAGCTTGATG............................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GCGTCTATATTATAAAACAAATC......................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................TTTGTCGGCGGCGTGTTGTACTA................................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................TGTTGTCGTGCTTGCTTTGTTGTTA..................................................................................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCTCGTTCGTTCAAGAATTC.......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AGCTTTGTTGTTGTTGTTGATG............................................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................TGATGAGTGTGAATTGTTGTC....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CGTTCGTTCAAGAATCCGCTA...................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCGTTCAAGAATTCGCTAGC.................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTGTTGGTGATGGTGAGTGTG................................................................................................................................................................................................................. 21 2 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................TGTCGTGCTTGCTTTATTGTT...................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TACGTCTAATTAAATTTGTT............................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TTGATGGCGCCCGCCCCCAAT............. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................GTTGGTGATGGTGAGTGTGAA............................................................................................................................................................................................................... 21 2 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
........................................GAATTGTTGTCATGCTTGCTT............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GTTGATGATGATGAGTGTGAA............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTTTTTTGCTAGCTTGATG............................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......TCGCTTTGTTGTTGTTGTTGA............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CGCTCGTTCAAGAATTCGCTA...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCTCGTTCGTTCAAGGGTTC.......................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................CGGCTTTGCGTCTATATTAT................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTATTTACTTTACGTCGGCGGC........................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................TCGTTCGTTCGAGAATTCGCT....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCTCGTTCGTTCAAGAATT........................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................CTTTGCGTCTATATTATAAAA............................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................GAATTCGCTAGCTTTTTATTT........................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGTCGGCGGCGTGTTGTACTA................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................TGCTTGCTTTGTTGTTACGGC................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................GCTTTGTTGTTACGGCAGCT............................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GCGGCGTGTTGTACTATA.............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TATATTATAAAACAAATCAAT...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................TTACGTCGGCGGCGTGTTGTA................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTTCAAGAATTCGCTAGCTTT................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................TGTGAATTGTTGTCATGCTT................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................GTTGATGATGGTGAGTGTGAA............................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TTTCGTTCAAGAATTCGCTAGC.................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TTGATGATGGTGAGTGTGAAT.............................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GAATTCGCTAGCTTTTTATTTAC......................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................GCGGCTTTGCGTCTATATTATG.................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................GTCTATATTATAAAACAAAT.......................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................TGCTTTATTGTTACGGCAGCT............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................ATGATGATGAGTGTGAATTGT........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGTGGGTTGTTGTCATGCTTG................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGTCGGCGGCGTGTTGTACTGT............................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGCTAGCTTGATGGCGCCCGC.................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................GCATGCTTGCTTTATTGTTAC.................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AGAAAACCTCGTTCGTTCA................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TTGCTTTGTTGTTACGGCAGC.............................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................ATGATGATGAGTGTGAATTGTT.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AAATTAAATTTGTTTTTCGCT..................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTTTTCGCTAGCTTGATG............................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................AGTGTGAGTTGTTGTCATGCT.................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TTTACGTCGGCGGCGTGTTGTA................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................ATGCTTGCTTTATTGTTACG................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................TTTATTGTTACGGCAGCTGCG.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................GCGGCGTGTTGTACTGTACGT........................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTTTTTCGCTAGCTTGGTG............................ 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGCCCCCAATAAAAATGGTGAT. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................GTTGCGGCAGCTGCGTCGCGG.................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TGCTTTATTGTTACGGCAG............................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....CATCGCTTTGTTGTTGTTGT.................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TGAATTGTTGTCATGCTTGCT.............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CCCCCAATAAAAATGGTGATA 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................GTGTGAGTTGTTGTCATGCTT................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................GAGTGTGAATTGTTGTCATGCTTGCT.............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGACCGTCGCTTTGTTGTTGT..................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................GTTGATGATGATGAGTGTGAG............................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................TGTCATGCTTGCTTTATTGTTA..................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................TTGTTGTTGATGATGGTGAGT.................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................AAAACCTCGTTCGTTCAAGAA............................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CGTTCGTTCAAGAATTCGCTAGC.................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CCGTTCGTTCAAGAATTCGCT....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TTTGTTTTTCGCTAGCTTGATG............................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GTGTGAATTGTTGTCATGCT.................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................GTTGTTGGTGATGATGAGTGT.................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATGGCGCCCGCCCCCAATAAA.......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CGGCAGCTGCGTCGCGGCTT................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CCGCTAGCTTTTTATTTACTT....................................................................................... 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TTTGTTGTTGTTGTTGATGAT........................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGCTTTGTTGTTGTTGTTGATG............................................................................................................................................................................................................................. 22 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGTCGGCGGCGTGTTGTG................................................................... 18 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................GTTGTTGTTGATGATGATGA...................................................................................................................................................................................................................... 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................GTTGATGATGATGAGTGTGGG............................................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCTAGATTGTTGGCGCCAG..................... 19 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................TATGATGAGTGTGGGTTGTTGT........................................................................................................................................................................................................ 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............TGTTGTTGTTGTTGATGATGA......................................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GGTGGTGAGTGTGAATTGT........................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............TTGTTGTTGATGATAATGATGA...................................................................................................................................................................................................................... 22 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................ATGATGGTGAGTGTGGGTTGT........................................................................................................................................................................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............TGTTGTTGTTGTTGATGATG.......................................................................................................................................................................................................................... 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGTTCCGGCAGCTGCATCA....................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TTTTATTTTCTTTACGTC................................................................................. 18 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................ATGTTGGGAGTGAATTGTT.......................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......GCGCTTTGTTGTTGTTGT.................................................................................................................................................................................................................................. 18 1 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:7874954-7875203 + dsi_25969 TCTGGTAGCGAAAC---------AACAACAACAA--C-----T---ACTACTACTCACACTTAACAACAGTACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------AACGCAGATATAATATTTTGTTTA----GTTAATTC---TTTTG----------GAGCAAGCAAGTT---CTTAAGCGATCG-----------AA--AAATAAATGAAATGCAGCCG------CCGCACAACATGATATGCAGAT-TAATTTAAACAAAA-AGC------GA----T-C---GAACTACCGCG------GGCGGGGGTTAT--------TTTTA--CCACTAT
droSec2 scaffold_35:153701-153949 + TCTGGTAGCGAAAC---------AACAACAACAA--C-----T---ACTACTACTCACACTTAACAACAGTACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------AACGCAGATATAATATTTTGTTTA----GTTAATTC---TTTTG----------GAGCAAGCAAGTT---CTTAAGCGATCG-----------AA--AAATAAATGAAATGCAGCCG------CCGCACAACATGATATGCAGAT-TAATTTAAACAAAA-AGC------GA----T-C---AAACTACCGCG------GGCGGGGGTTA---------TTTTA--CCACTAT
dm3 chrX:8303394-8303647 + TCTGGTAGCGAAAC---------AACAACAACAA--C-----TACTACTACTACTCACACTTAACAACAATACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------AACGCAGAT---ATATTTTTTTTT----GTTAATTC---TTTTG----------GAGCAAGCAAGTTCTTCTTCAGCGAGCA-----------AA--AAATAAATGAAATGCAGCCG------CCGCACAACATGATATGCAGAT-TAATTTAAACAAAACAGC------GA----T-C---GAACTACCGCG------GGTGGGGGTTCT--------TTTTA--TCACTAT
droEre2 scaffold_4690:6804637-6804867 - TCTGGTAGCGATAC---------TACTAC-------------T---ACTACTACTCACACTTAACAACAATACGTACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCA--------------------------AACGCA-----AATATTTTTTTTT----GTTAATTC----TTTG----------GAGCAAGCAAGATATTCTTCAGCGAGCG-----------AA---AATAAATGAAATGCAGCCG------CCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AGC------GA----T-C---GAACTACGGGG------AGGGCGGGTT----------TTTTG--CCTTTAT
droYak3 X:13010654-13010880 - TCTGGTAGCGATAT---------TACTAC-------------T---ACTATTACTCACACTTAACAACAATACGTACGAAACAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----C-A--------------AACGCAG-----ATATTTT-TTTT----GTTAATTC----TTTG----------GAGCAAGCAAGAT---CTTCAGCGAGCG-----------AA---AATAAATGAAATGCAGCCG------CCGCACACCATGATATGCAGATTTAATTTAAACAAAA-AGC------AA----T-C---GAACTACG---------G--GGGG-TT-----------TTCG--CCACTAT
droEug1 scf7180000409117:105730-105923 - TCTGGTACCGATTCTACTTACATTA---TTATT----AA-TA--------------------------------------ATAAC-AATGCAG-----------------------------------------------------CCGACGACGCAACGC-----A-A--------------TAAGC------AACATTTTTTTAA---------------ATTTG----------GAGCAAGCAAGAT---CTTCAGCAAGCA-----------AA---AATAAATGAATTGCTGCCG------CCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AGA------AA---------------------AATACTG--GGGG-TT-TCCA---------------AGAC
droBia1 scf7180000302041:118888-119113 + TCTGGTAC--------------------------------------------------ATTTAATA--------------ATAACAAATGCA-----------------------------------------------------GCCGACGACGCAGCGCAGCGCA-A--------------AACG---------TTTTCTGTTCATTTTTT---TTTATAATTTG----------GAGCAAGCAAGAT---CTTTGGCGAGCC-----------AA-TAAATAAATGAAATGCAGCCGCCGCCGCCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AGAAAAAACAAAAAATACGAG-----------AGTACGG--GGGGGTTTTCCAAGGCAT-TTG--AC---AC
droTak1 scf7180000414432:251800-252008 + TCTGGTACTAGCAT---------AAT-----------AA-TA--------------------------------------ATAAT-AATGCA--------------------------------------------------------GCCGACGACGGGA-----CG---------------A--GC------GA--TTCT-TTTT----TTTGATTC--GTTTTG----------GAGCAAGCAAGAT---CTTTGGCGAGCCAGAAGAAAGAGAA---AATAAATGAAATGCAGCCGCCTCCGCCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AAG------AAACAGA-AAAA-----------AATACGG--GGGGATA----------TTTCG---C---AC
droEle1 scf7180000491006:1855904-1856105 + TCTGGTACCGATAC--------------TGACAAAT-ATTCA--------------------------------------ATAAT-AATGCAA---------------------------------------------------------CAACAAAACGCAACGAA-AACAACTCAA----AAA------------------CTCAC------ACTTT---TTTTG----------GAGCAAGCAAGAA---TGTCGGCGAGCA-----------AC---ACAAAATGACTTGCAGCCG------CAGCACACCATGATATGCGGAT-TAATTTAAACAAAA-AGA------AA----------------------ATAAGG--GGGG-TT-TCCTAGACAT-TTGGCAC---AC
droRho1 scf7180000779514:189721-189914 - TCTGGTACCGATAC--------------TGACAAAT-ATTTA--------------------------------------ATAAC-AATGCAA---------------------------------------------------------CAACGAAACGCAACGAA-AAACACTGAAAAAAAAA------------------CTCAC------ACTTT---TTTTG----------GAGCAAGCAAGAT---TCTCGGCGAGCG-----------AA---AATAAATGACTTGCAGCCG------CCGCACACCATGATATGCGGAT-TAATTTAAACAAAA-AAA------------------------------ATAAGA--GGGGGTT-TCCT---------------AGAT
droFic1 scf7180000454077:1674181-1674383 - TCTGGTACCGATACTGCCCACTTA----------AT-ATTCA--------------------------------------ATAAT-TATGCA--------------------------------------------------------GCCTACGAAACGCAACGCA-AAACCCACAA----------------AATATTT----AT----G----------TTTTG----------GAGCAAGCAAGTT---CTTCAGCGAGCC-----------AA---AATAAATGAAATGCAACCG------CCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AAC------GAAAAGT-CGAA-----------ATTGCGG--GGGGGTTC--TA---------------TAAT
droKik1 scf7180000302344:1373658-1373832 + GCTACTGCCTCTGGTACTGATTT-----GTACGAAT-A----------------------------------------AACAGCT-AATGCGGCGACTAGCGCAACGGCGGCTG------------------------------------------------------G--------AGCG--A--AC------AATACGTT---TT----TC---TTC----CCTGGGGCGAAAAAGAGCAAGCGAGACCT-TTTCAGCAGGCG-----------AAATACGAAAATGA--------------------ACACCATGATATGCAGAT-TAATTTCGACAA---------------------------------------------------------------------------
droAna3 scaffold_12943:4173498-4173543 - AAATTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTTTTAA----GTTTATAA---TTTTT----------GAGAAAAAAAGTT---C------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_30:875488-875532 + ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAA-TAGTTCAACAAAAA-AAC------AG----T-C---GCAGTGTTGAT------GGT-------------------------------
droWil2 scf2_1100000004558:1294735-1294791 + T-----AGCAAAAC---------AACAACAACAA--C----------------------------AACAACAGCAACTAAATAAC-AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--AAAGAAAAGAA-----------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13052:1902866-1902931 - TCTGCTAGCAATTC---------AACAACAACAA--C-----AACAACAAC--------------AACAACAACAAC--AACAAC-AAC--------------------------------------------------------GACAACAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:2604858-2604937 - TCTGAAGACAAC--------------AACAACAA--C-----T---ACTACCA-------------------------------------------------TAGCAACAACTACAGCAACAGCAATAGCAACAATTGCAACAATGGCATTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:11061615-11061672 + AACCACAACAACAA--------------C-------------A---ACAACTACACAAATTCAAAGACAA-ATTGGCGACATAAA-AAT--------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTGGTAGCGAAAC---------AACAACAACAA--C-----T---ACTACTACTCACACTTAACAACAGTACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------AACGCAGATATAATATTTTGTTTA----GTTAATTC---TTTTG----------GAGCAAGCAAGTT---CTTAAGCGATCG-----------AA--AAATAAATGAAATGCAGCCG------CCGCACAACATGATATGCAGAT-TAATTTAAACAAAA-AGC------GA----T-C---GAACTACCGCG------GGCGGGGGTTAT--------TTTTA--CCACTATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................AATAAC-AAT--------------------------------------------------------GCCGTCGACGCA...................................................................................................................................................................................................................................................................21118.001820200065021000000
.......................................................................................AT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------.........................................................................................................................................................................................................................................2117.00700000004003000000
...........................................................................................................................................................................................................TTTA----GTTAATTC---TTTTG----------GAGC...............................................................................................................................................................................2115.00521000020000000000
..............................................................................................................................................................................................................................................................................................................................................TAAACAAAA-AGC------GA----T-C---GAACT..............................................2114.00422000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTAAACAAAA-AGC------GA----T-C---GAAC...............................................2113.00310000002000000000
...........................................................CTTAACAACAGTACGAACGAA................................................................................................................................................................................................................................................................................................................................................2113.00300000030000000000
.......................................................................................................................................................................................................................................................................................................................................................................T-C---GAACTACCGCG------GGCGGGGG..........................2113.00300010000000002000
..........................................................................................................................................................................................................................................................................................................................................................C------GA----T-C---GAACTACCGCG------GGCGG.............................2113.00300000010000011000
..............................................................................AAATAAC-AAT--------------------------------------------------------GCCGTCGACGC....................................................................................................................................................................................................................................................................2113.00320000000000010000
........................................................................................................................................................................................................................................................................................................................................................AGC------GA----T-C---GAACTACCGCG------GGC...............................2112.00200000000002000000
................................................................CAACAGTACGAACGAAATAAC-..........................................................................................................................................................................................................................................................................................................................................2112.00200000002000000000
..........................................................................................................................................................................................................................................................................................................................................AATTTAAACAAAA-AGC------GA----T-C---GA.................................................2212.00200000020000000000
............................................................................................................................................................................................................................................................................................AAATGAAATGCAGCCG------CCGCA.........................................................................................................2112.00200000002000000000
.............................................................................GAAATAAC-AAT--------------------------------------------------------GCCGTCGACGT....................................................................................................................................................................................................................................................................2212.00220000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AA-AGC------GA----T-C---GAACTACCGCG------G.................................2112.00200000000002000000
.............................................................................................................................................................................................................................................................................................................................................................................GAACTACCGCG------GGCGGGGGTT........................2112.00200000001001000000
................................................................................................................................................................................................................................................................................................................................................AACAAAA-AGC------GA----T-C---GAACT..............................................1911.00101000000000000000
....................................................................................................................................................................................................................TTAATTC---TTTTG----------GAGCAAGCA..........................................................................................................................................................................2111.00100000000000010000
................................................................................ATAAC-AAT--------------------------------------------------------GCCGTCGACGCA...................................................................................................................................................................................................................................................................2011.00100000010000000000
............................................................................CGAAATAAC-AAT--------------------------------------------------------GCCGTCGAC......................................................................................................................................................................................................................................................................2111.00100000000010000000
...................................................................................................................................................................................................................................................................................................ATGCAGCCG------CCGCACAACATG..................................................................................................2111.00110000000000000000
................................................................................ATAAC-AAT--------------------------------------------------------GCCGTCGACG.....................................................................................................................................................................................................................................................................1811.00101000000000000000
......................................................................TACGAACGAAATAAC-AAT--------------------------------------------------------GCC............................................................................................................................................................................................................................................................................2111.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................AT-TAATTTAAACAAAA-AGC------G..............................................................2011.00100000100000000000
...............................................................................................................................................................................................................................................................................................................................................AAACAAAA-AGC------GA----T-C---GAAC...............................................1911.00100001000000000000
...................................................................................................................................................................................................................................................................................................................................................AAAA-AGC------GA----T-C---GAACTACCG..........................................2011.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................TGCAGAT-TAATTTAAACAAAA-........................................................................2111.00100000100000000000
........................................................................................................................................................................................................................................................TT---CTTAAGCGATCG-----------AA--AAATA...................................................................................................................................2111.00100000010000000000
.....................................................................GTACGAACGAAATAAC-AAT--------------------------------------------------------GC.............................................................................................................................................................................................................................................................................2111.00100000010000000000
......................................................................................................................................................................................................................................................AGTT---CTTAAGCGATCG-----------AA--AA......................................................................................................................................2011.00100000000001000000
............................................................TTAACAACAGTACGAACGAAA...............................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.......................................................................................................................................................................................................................................................GTT---CTTAAGCGATCG-----------AA--AAA.....................................................................................................................................2011.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................C------GA----T-C---GAACTACCGCG------GGCGGT............................2211.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................CACAACATGATATGCAGAT-TA.....................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................AAAA-AGC------GA----T-C---GAACTACCGCG------..................................2211.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................AAA-AGC------GA----T-C---GAACTACCGCG------..................................2111.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................AATTTAAACAAAA-AGC------GA----.........................................................1811.00100001000000000000
......................................................................................AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CT........................................................................................................................................................................................................................................................2111.00100000000000010000
......................................................................................AAT--------------------------------------------------------GCCGTCGACGCA...................................................................................................................................................................................................................................................................1511.00100000000001000000
......................................................................................................................................................CGACGCAGCGC-----CGA--------------AACGCAG..................................................................................................................................................................................................................................2111.00100000000001000000
.................................................................................TAAC-AAT--------------------------------------------------------GCCGTCGACGCAGC.................................................................................................................................................................................................................................................................2111.00100000000001000000
...................................................................................AC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----C.........................................................................................................................................................................................................................................................2211.00110000000000000000
.......................................................................ACGAACGAAATAAC-AAT--------------------------------------------------------GCCG...........................................................................................................................................................................................................................................................................2111.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................GAACTACCGCG------GGCGGGG...........................1811.00100000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................C---GAACTACCGCG------GGCGGGGGTT........................2211.00100000001000000000
.........................................................................................................................................................................................................................................................................................AATAAATGAAATGCAGCCG------CC............................................................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................CAAAA-AGC------GA----T-C---GAACTACC...........................................2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................ATTTAAACAAAA-AGC------GA----T-C---GA.................................................2111.00100000000001000000
.........................................................................................................................................................CGCAGCGC-----CGA--------------AACGCAGAT................................................................................................................................................................................................................................2011.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................A-AGC------GA----T-C---GAACTACCGC.........................................1811.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................C---GAACTACCGCG------GGCGGGGG..........................2011.00100010000000000000
...............................................................................................................................................................................................................................................GCAAGCAAGTT---CTTAAGCGATCG-----------............................................................................................................................................2311.00100000100000000000
...........................................................................................................................................................CAGCGC-----CGA--------------AACGCAGATAT..............................................................................................................................................................................................................................2011.00100001000000000000
.......................................................CACACTTAACAACAGTACGA.....................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
.................................................................................................................................................................................................TAATATTTTGTTTA----GTTAATT......................................................................................................................................................................................................2111.00100000010000000000
.............................................................................GAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----..........................................................................................................................................................................................................................................................2711.00100100000000000000
................................................................................................................................................................C-----CGA--------------AACGCAGATATAATATTTT......................................................................................................................................................................................................................2311.00100000000001000000
...........................................................................................................................................................................................CAGATATAATATTTTGTTTA----G............................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................................................................................................................................AAGTT---CTTAAGCGATCG-----------A...........................................................................................................................................1811.00100000000001000000
......................................................................................AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------.........................................................................................................................................................................................................................................2211.00100000000000100000
......................................................................................AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CG........................................................................................................................................................................................................................................................2111.00100000000001000000
.........................................................................................................................................................CGCAGCGC-----CGA--------------AACGCAGATA...............................................................................................................................................................................................................................2111.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................AAACAAAA-AGC------GA----T-C---GAACTA.............................................2111.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................T-C---GAACTACCGCG------GGCGGGGGT.........................2211.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................C---GAACTACCGCG------GGCGGGGGT.........................2111.00100000001000000000
................................................................................................................................................................................................................................................................................................GAAATGCAGCCG------CCGCACAAC.....................................................................................................2111.00100000100000000000
...............................................................................................................................................................................................................................................................TAAGCGATCG-----------AA--AAATAAATG...............................................................................................................................2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................C------GA----T-C---GAACTACCGCG------GGCGGG............................2211.00100000001000000000
..................................................................................................................................................................................................................................................AGCAAGTT---CTTAAGCGATCG-----------A...........................................................................................................................................2111.00100001000000000000
...........................................................................................................................................................................................................................................................................................................G------CCGCACAACATGATATGCAGA.........................................................................................2211.00100000001000000000
................................................................................................................................................................................................................................................................AAGCGATCG-----------AA--AAATAAA.................................................................................................................................1821.00200002000000000000
.................................................................................................................................................................................................................................................................................................................................................................GA----T-C---GAACTACCGCG------GGCGGGT...........................2211.00100000001000000000
...................................................................................................................................................................................................................................................GCAAGTT---CTTAAGCGATCG-----------AA--........................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................AATGAAATGCAGCCG------CCGCAC........................................................................................................2111.00100000001000000000
.....................................................................GTACGAACGAAATAAC-AAT--------------------------------------------------------...............................................................................................................................................................................................................................................................................1911.00110000000000000000
............................................................TTAACAACAGTACGAACGAA................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
...........AAC---------AACAACAACAA--C-----T---ACT...............................................................................................................................................................................................................................................................................................................................................................................1930.33100010000000000000
droSec2
TCTGGTAGCGAAAC---------AACAACAACAA--C-----T---ACTACTACTCACACTTAACAACAGTACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------AACGCAGATATAATATTTTGTTTA----GTTAATTC---TTTTG----------GAGCAAGCAAGTT---CTTAAGCGATCG-----------AA--AAATAAATGAAATGCAGCCG------CCGCACAACATGATATGCAGAT-TAATTTAAACAAAA-AGC------GA----T-C---AAACTACCGCG------GGCGGGGGTTA---------TTTTA--CCACTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................AT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------.........................................................................................................................................................................................................................................2115.0051103
...............................................................................AATAAC-AAT--------------------------------------------------------GCCGTCGACGCA...................................................................................................................................................................................................................................................................2113.0030102
...........................................................................................................................................................................................................TTTA----GTTAATTC---TTTTG----------GAGC...............................................................................................................................................................................2113.0032100
..........................................................................................................................................................................................................................................................................................................................................................C------GA----T-C---AAACTACCGCG------GGCGG.............................2112.0022000
........................................................................................T--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------A........................................................................................................................................................................................................................................2112.0021100
.......................................................................................................................................................................................................................................................................................................................................................................T-C---AAACTACCGCG------GGCGGGGGT.........................2211.0010100
............................................................TTAACAACAGTACGAACGA.................................................................................................................................................................................................................................................................................................................................................1911.0010001
..........................................................................................................................................................................................................................................................................................ATAAATGAAATGCAGCCG------CCG...........................................................................................................2111.0011000
...................................................................................................................................................CGTCGACGCAGCGC-----CGA--------------AACG.....................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................AGC------GA----T-C---AAACTACCGCG------GGCG..............................2211.0010001
.....TAGCGAAAC---------AACAACAACAA--C-----T---..................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
......................................................................................AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CC........................................................................................................................................................................................................................................................2111.0011000
......................................................TCACACTTAACAACAGTACG......................................................................................................................................................................................................................................................................................................................................................2011.0011000
............................................................................................................................................................................................................TTA----GTTAATTC---TTTTG----------GAGC...............................................................................................................................................................................2011.0010001
............................................................................................................................................................................................................TTA----GTTAATTC---TTTTG----------GAGCA..............................................................................................................................................................................2111.0010100
...........................................................CTTAACAACAGTACGAACGAA................................................................................................................................................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................................................TA----GTTAATTC---TTTTG----------GAGCAA.............................................................................................................................................................................2111.0010010
................................................................................ATAAC-AAT--------------------------------------------------------GCCGTCGACGCA...................................................................................................................................................................................................................................................................2011.0010001
...............................................................................................................................................................................................................................................................TAAGCGATCG-----------AA--AAATAAATG...............................................................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................GC------GA----T-C---AAACTACCGCG------GGCG..............................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................C------GA----T-C---AAACTACCGCG------GGC...............................1911.0010001
..............................................................................................................................................................................................................................................................................................................................................TAAACAAAA-AGC------GA----T-C---AAACT..............................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................AAACTACCGCG------GGCGGGGGTT........................2111.0010100
..............................................................................AAATAAC-AAT--------------------------------------------------------GCCGTCGACGC....................................................................................................................................................................................................................................................................2111.0010001
......................................................................................................................................................CGACGCAGCGC-----CGA--------------AACGCA...................................................................................................................................................................................................................................2011.0010100
.........................................................................................................................................................................................................................................................................................................................................................................C---AAACTACCGCG------GGCGGG............................1811.0010001
.........................................................CACTTAACAACAGTACGAACGT.................................................................................................................................................................................................................................................................................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................A--AAATAAATGAAATGCAGCCG------..............................................................................................................2111.0010100
............................CAACAA--C-----T---ACTACTACTCACA.....................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................................CGCAGCGC-----CGA--------------AACGCAGATA...............................................................................................................................................................................................................................2111.0011000
.................................................................................................................................................................................................................................................................................................................................................................GA----T-C---AAACTACCGCG------GGCGGG............................2111.0011000
.............................................................................................................................................................................................................TA----GTTAATTC---TTTTG----------GAGC...............................................................................................................................................................................1911.0011000
...............................................................................AATAAC-AAT--------------------------------------------------------GCCGTCGACGC....................................................................................................................................................................................................................................................................2011.0011000
.......................................................................................................................................................................................................................................................................................................................................................................T-C---AAACTACCGCG------GGCGGGGG..........................2111.0010001
..........................................................................................................................................................................................................................C---TTTTG----------GAGCAAGCAAGTT---CT.................................................................................................................................................................2111.0010100
.......................................................................................................................................................................................................................ATTC---TTTTG----------GAGCAAGCAAGTT---CT.................................................................................................................................................................2411.0010100
......................................................................................................................................................CGACGCAGCGC-----CGA--------------AACGCAG..................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................AGATATAATATTTTGTTTA----GT...........................................................................................................................................................................................................2111.0010001
dm3
TCTGGTAGCGAAAC---------AACAACAACAA--C-----TACTACTACTACTCACACTTAACAACAATACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------AACGCAGAT---ATATTTTTTTTT----GTTAATTC---TTTTG----------GAGCAAGCAAGTTCTTCTTCAGCGAGCA-----------AA--AAATAAATGAAATGCAGCCG------CCGCACAACATGATATGCAGAT-TAATTTAAACAAAACAGC------GA----T-C---GAACTACCGCG------GGTGGGGGTTCT--------TTTTA--TCACTATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................AT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------.........................................................................................................................................................................................................................................21129.00290000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000020000010000060000000000000000000000000000000000000000000000000000000000000000000000000100041000000000000000201000000010000000102000000100301000
...............................................................................AATAAC-AAT--------------------------------------------------------GCCGTCGACGCA...................................................................................................................................................................................................................................................................21126.00260000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001020300000000000000000000000000000000000030000000000000010000000000000000000000000000000000000000100000000000000000000001100020000000010000000600000000000000000000000000000100100
....................................................................................................................................................................................................................................................CAAGTTCTTCTTCAGCGAGCA-----------............................................................................................................................................21125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000002000001000000000000001400000000000000000000000000000000000000001000000000000000000000000000000000000000000000000200010000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AAACAGC------GA----T-C---GAACTACCGC.........................................21122.00220000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000500040000000000000101500000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................ATTTAAACAAAACAGC------GA----T-C---G..................................................21122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000003000000000000000000000000000000010000000000000100000000000000000001500010000001001000000303000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CAAAACAGC------GA----T-C---GAACTACC...........................................21120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000010000000300000000000000000002400000000000000010000000000010200000
.............................................................................................................................................................................................................................................................................................................................................................................GAACTACCGCG------GGTGGGGGTT........................21118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000001200000000000000000001000000000000000200000000000000001000000210000000000000001000010010100000000000000000100000
..........................................................................................................................................................................................................................................................................................ATAAATGAAATGCAGCCG------CCG...........................................................................................................21115.00150000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000001000000002300010000000010000000001000000000000000100000000100100000
.........................................................................................................................................................................................................................TC---TTTTG----------GAGCAAGCAAGTTC.....................................................................................................................................................................21115.00150000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000300100000000000000000100010000000000000100000000000300000
......................................................................................................................................................................................................................................................................................................................................................ACAGC------GA----T-C---GAACTACCGCG------G.................................21115.00150000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012000000000000000000000010000000000000000020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000002000000000000000100000000100101000
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...............................................................................................................................................................................................................................................................................................................................................................................................GTGGGGGTTCT--------TTTTA--TCACT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................ATACGAACGAAATAAC-AAT--------------------------------------------------------GCCGTC.........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----CGA--------------.........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AAGCAAGTTCTTCTTCAGC............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTTAAACAAAACAGC------GA----T-C---GAACTA.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................GCCGTCGACGCAGCGC-----CGA--------------AACGCA...................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CTTCAGCGAGCA-----------AA--AAATAAA.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................TTTTTTTT----GTTAATTC---TTTTG----------GTC................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................C---GAACTACCGCG------GGTGGGG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CCGTCGACGCAGCGC-----CGA--------------AA.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGCGAGCA-----------AA--AAATAAATG...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CGAGCA-----------AA--AAATAAATGAAATG..........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GC------GA----T-C---GAACTACCGCG------GGTGGGGG..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AGC------GA----T-C---GAACTACCGCG------GGTT..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................ACTACTACTACTCACACTTAACA..............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTAAACAAAACAGC------GA----T-C---GAAC...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTTTTT----GTTAATTC---TTTTG----------GAGC...............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ACAATACGAACGAAATAAC-AAT--------------------------------------------------------GCC............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCTGGTAGCGATAC---------TACTAC-------------T---ACTACTACTCACACTTAACAACAATACGTACGAAATAAC-AAT--------------------------------------------------------GCCGTCGACGCA--------------------------AACGCA-----AATATTTTTTTTT----GTTAATTC----TTTG----------GAGCAAGCAAGATATTCTTCAGCGAGCG-----------AA---AATAAATGAAATGCAGCCG------CCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AGC------GA----T-C---GAACTACGGGG------AGGGCGGGTT----------TTTTG--CCTTTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................AATAAC-AAT--------------------------------------------------------GCCGTCGACGCA--------------------------.........................................................................................................................................................................................................................................2114.0042000110
...................................................................................................................................................................................................................GTTAATTC----TTTG----------GAGCAAGCA..........................................................................................................................................................................2112.0021000100
.................................................................................................................................................................................................................................................................................................................................................................GA----T-C---GAACTACGGGG------AGGGCGT...........................2211.0011000000
....................................................................................................................................................................................................................................................CAAGATATTCTTCAGCGAGCG-----------............................................................................................................................................2111.0010000100
....................................................................................C-AAT--------------------------------------------------------GCCGTCGACGCA--------------------------AACG.....................................................................................................................................................................................................................................2011.0011000000
.....................................................................................................................................................................................................................................................AAGATATTCTTCAGCGAGCG-----------A...........................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................AACTACGGGG------AGGGCGGGTT----------C.............2111.0010100000
...........................................................................................................................................................................................................................................................................................TAAATGAAATGCAGCCG------CCGC..........................................................................................................2111.0010000100
.......................................................................................................................................................................................................TTTTTTTT----GTTAATTC----TTTG----------G..................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................TTAATTC----TTTG----------GAGCAAGCA..........................................................................................................................................................................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................................A-AGC------GA----T-C---GAACTACGGGG------AG................................2111.0010000100
..........................TAC-------------T---ACTACTACTCACACTTA.................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................AAATGCAGCCG------CCGCACACCA....................................................................................................2111.0011000000
.......GCGATAC---------TACTAC-------------T---ACTAC.............................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.....................................................................ATACGTACGAAATAAC-AAT--------------------------------------------------------GCCGT..........................................................................................................................................................................................................................................................................2411.0010000100
......................................................................TACGTACGAAATAAC-AAT--------------------------------------------------------GCCC...........................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................GAACTACGGGG------AGGGCGGGTT----------..............2111.0010000010
.................................................................................................................................................................................................................................................................................................................................................................GA----T-C---GAACTACGGGG------AGGGC.............................2011.0010000100
...............................................................................................................................................................................................................................................................................................................................................AAACAAAA-AGC------GA----T-C---GAACTA.............................................2111.0010000100
............................................................................................................................................................................................................TTT----GTTAATTC----TTTG----------GAGCA..............................................................................................................................................................................2011.0010000100
............................................................................CGAAATAAC-AAT--------------------------------------------------------GCCGTCG........................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................GA----T-C---GAACTACGGGG------AGGGCG............................2111.0011000000
..........................................................................................................................................................................................................................................................................................ATAAATGAAATGCAGCCG------CCG...........................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................AAA-AGC------GA----T-C---GAACTACGGGG------A.................................2211.0011000000
..............................................................................................................................................................................................................T----GTTAATTC----TTTG----------GAGCAAGT...........................................................................................................................................................................2111.0010000100
................................................................................ATAAC-AAT--------------------------------------------------------GCCGTCGACGCA--------------------------.........................................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................T-C---GAACTACGGGG------AGGGCGGGTT----------T.............2411.0011000000
.....................................................................................................................................................................................................................................................................................................................................................AA-AGC------GA----T-C---GAACTACGGGG------AT................................2211.0010000001
droYak3
TCTGGTAGCGATAT---------TACTAC-------------T---ACTATTACTCACACTTAACAACAATACGTACGAAACAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----C-A--------------AACGCAG-----ATATTTT-TTTT----GTTAATTC----TTTG----------GAGCAAGCAAGAT---CTTCAGCGAGCG-----------AA---AATAAATGAAATGCAGCCG------CCGCACACCATGATATGCAGATTTAATTTAAACAAAA-AGC------AA----T-C---GAACTACG---------G--GGGG-TT-----------TTCG--CCACTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................ACAAC-AAT--------------------------------------------------------GCCGTCGACGCAGCGC-----C-A--------------AAC......................................................................................................................................................................................................................................2915.00500000000005
........................................................................................T--------------------------------------------------------GCCGTCGACGCAGCGC-----C-A--------------AACGCAG-----AT...........................................................................................................................................................................................................................2815.00500000000005
......................................................................................................................................................................................................................................................................................................................ACACCATGATATGCAGAT........................................................................................1811.00100100000000
..........................................................................TACGAAACAAC-AAT--------------------------------------------------------GCCGTCGACGCAGC.................................................................................................................................................................................................................................................................2811.00100100000000
..........................................................................................................................................................................................................................C----TTTG----------GAGCAAGCAAGAT---CTTC...............................................................................................................................................................2211.00101000000000
...........................................................................................................................................................................................................TTTT----GTTAATTC----TTTG----------GAG................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................TTCAGCGAGCG-----------AA---AATAAATGAAAT...........................................................................................................................2511.00100000010000
......................................................................TACGTACGAAACAAC-AAT--------------------------------------------------------GCC............................................................................................................................................................................................................................................................................2111.00100100000000
....................................................................................................................................................................................................................TTAATTC----TTTG----------GAGCAAGCAA.........................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................CAAGCAAGAT---CTTCAGCGAGC........................................................................................................................................................2111.00110000000000
droEug1
TCTGGTACCGATTCTACTTACATTA---TTATT----AA-TA--------------------------------------ATAAC-AATGCAG-----------------------------------------------------CCGACGACGCAACGC-----A-A--------------TAAGC------AACATTTTTTTAA---------------ATTTG----------GAGCAAGCAAGAT---CTTCAGCAAGCA-----------AA---AATAAATGAATTGCTGCCG------CCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AGA------AA---------------------AATACTG--GGGG-TT-TCCA---------------AGACSizeHit CountTotal NormTotal
No Reads
droBia1
TCTGGTAC--------------------------------------------------ATTTAATA--------------ATAACAAATGCA-----------------------------------------------------GCCGACGACGCAGCGCAGCGCA-A--------------AACG---------TTTTCTGTTCATTTTTT---TTTATAATTTG----------GAGCAAGCAAGAT---CTTTGGCGAGCC-----------AA-TAAATAAATGAAATGCAGCCGCCGCCGCCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AGAAAAAACAAAAAATACGAG-----------AGTACGG--GGGGGTTTTCCAAGGCAT-TTG--AC---ACSizeHit CountTotal NormTotal
No Reads
droTak1
TCTGGTACTAGCAT---------AAT-----------AA-TA--------------------------------------ATAAT-AATGCA--------------------------------------------------------GCCGACGACGGGA-----CG---------------A--GC------GA--TTCT-TTTT----TTTGATTC--GTTTTG----------GAGCAAGCAAGAT---CTTTGGCGAGCCAGAAGAAAGAGAA---AATAAATGAAATGCAGCCGCCTCCGCCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AAG------AAACAGA-AAAA-----------AATACGG--GGGGATA----------TTTCG---C---ACSizeHit CountTotal NormTotal
No Reads
droEle1
TCTGGTACCGATAC--------------TGACAAAT-ATTCA--------------------------------------ATAAT-AATGCAA---------------------------------------------------------CAACAAAACGCAACGAA-AACAACTCAA----AAA------------------CTCAC------ACTTT---TTTTG----------GAGCAAGCAAGAA---TGTCGGCGAGCA-----------AC---ACAAAATGACTTGCAGCCG------CAGCACACCATGATATGCGGAT-TAATTTAAACAAAA-AGA------AA----------------------ATAAGG--GGGG-TT-TCCTAGACAT-TTGGCAC---ACSizeHit CountTotal NormTotal
No Reads
droRho1
TCTGGTACCGATAC--------------TGACAAAT-ATTTA--------------------------------------ATAAC-AATGCAA---------------------------------------------------------CAACGAAACGCAACGAA-AAACACTGAAAAAAAAA------------------CTCAC------ACTTT---TTTTG----------GAGCAAGCAAGAT---TCTCGGCGAGCG-----------AA---AATAAATGACTTGCAGCCG------CCGCACACCATGATATGCGGAT-TAATTTAAACAAAA-AAA------------------------------ATAAGA--GGGGGTT-TCCT---------------AGATSizeHit CountTotal NormTotal
No Reads
droFic1
TCTGGTACCGATACTGCCCACTTA----------AT-ATTCA--------------------------------------ATAAT-TATGCA--------------------------------------------------------GCCTACGAAACGCAACGCA-AAACCCACAA----------------AATATTT----AT----G----------TTTTG----------GAGCAAGCAAGTT---CTTCAGCGAGCC-----------AA---AATAAATGAAATGCAACCG------CCGCACACCATGATATGCAGAT-TAATTTAAACAAAA-AAC------GAAAAGT-CGAA-----------ATTGCGG--GGGGGTTC--TA---------------TAATSizeHit CountTotal NormTotal
No Reads
droKik1
GCTACTGCCTCTGGTACTGATTT-----GTACGAAT-A----------------------------------------AACAGCT-AATGCGGCGACTAGCGCAACGGCGGCTG------------------------------------------------------G--------AGCG--A--AC------AATACGTT---TT----TC---TTC----CCTGGGGCGAAAAAGAGCAAGCGAGACCT-TTTCAGCAGGCG-----------AAATACGAAAATGA--------------------ACACCATGATATGCAGAT-TAATTTCGACAA---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAATTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTTTTAA----GTTTATAA---TTTTT----------GAGAAAAAAAGTT---C------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droPer2
ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAA-TAGTTCAACAAAAA-AAC------AG----T-C---GCAGTGTTGAT------GGT-------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
T-----AGCAAAAC---------AACAACAACAA--C----------------------------AACAACAGCAACTAAATAAC-AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--AAAGAAAAGAA-----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........CAAAAC---------AACAACAACAA--C----------------------------AACA...........................................................................................................................................................................................................................................................................................................................................................22200.05101000
droVir3
TCTGCTAGCAATTC---------AACAACAACAA--C-----AACAACAAC--------------AACAACAACAAC--AACAAC-AAC--------------------------------------------------------GACAACAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
TCTGCTAGCAATTC---------AACAACAACAA--C-----A.....................................................................................................................................................................................................................................................................................................................................................................................27149.004900140000000000000000010008211330104000020000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................24133.0033003010000000000000001002635110203004010000000000000000000000000
TCTGCTAGCAATTC---------AACAACAAC................................................................................................................................................................................................................................................................................................................................................................................................23121.0021000000000000000000000000607020101002020000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACAA--............................................................................................................................................................................................................................................................................................................................................................................................25111.0011001000000000000000000001420020001000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAA.................................................................................................................................................................................................................................................................................................................................................................................................22110.0010000000100000000000000001102020001002000000000000000000000000000
TCTGCTAGCAATTC---------AACAACA..................................................................................................................................................................................................................................................................................................................................................................................................21110.0010100000000000000000000000401000003001000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----AACA..................................................................................................................................................................................................................................................................................................................................................................................2617.007006000000000000000000000010000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACAA--C-----......................................................................................................................................................................................................................................................................................................................................................................................2616.006001000000000000000000000102011000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAAC...................................................................................................................................................................................................................................................................................................................................................................................................2015.005000000000000000000000000102100000001000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--C-----A.....................................................................................................................................................................................................................................................................................................................................................................................2215.005000000000000000000000000120101000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----A.....................................................................................................................................................................................................................................................................................................................................................................................2314.004003000000000000000000000010000000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--C-----......................................................................................................................................................................................................................................................................................................................................................................................2114.004000000000000000000000000030000010000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--............................................................................................................................................................................................................................................................................................................................................................................................2113.003002000000000000000000000000100000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----AACAA.................................................................................................................................................................................................................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
...GCTAGCAATTC---------AACAACAACAA--C-----......................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000200000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----......................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000011000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACAA--C-----AAC...................................................................................................................................................................................................................................................................................................................................................................................2912.002000000000000000000000000002000000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACAA--C-----AA....................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--............................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--C-----AAC...................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000010000000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----AACAACA...............................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACAA--A-----......................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
..TGCTAGCAATTC---------AACAACAACAA--C-----A.....................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..TGCTAGCAATTC---------AACAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACC...............................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAACAA--T-----......................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAATT...............................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACAT.................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----AAC...................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--C-----AA....................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
.CTGCTAGCAATTC---------AACAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................2311.001000010000000000000000000000000000000000000000000000000000000000
....CTAGCAATTC---------AACAACAACAA--C-----AA....................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000100000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--C-----AACA..................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....TAGCAATTC---------AACAACAACAA--C-----AACAACA...............................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
TCTGCTAGCAATTC---------AACAACATA................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
.CTGCTAGCAATTC---------AACAACAACAT--A-----T.....................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
........CAATTC---------AACAACAACAA--C-----AAC...................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000010000000000000000000000000000000000000
........CAATTC---------AACAACAACAA--C-----AACAA.................................................................................................................................................................................................................................................................................................................................................................................2330.331000000000000000000000000010000000000000000000000000000000000000
.........AATTC---------AACAACAACAA--C-----AAC...................................................................................................................................................................................................................................................................................................................................................................................2080.252000000000000000000000000000200000000000000000000000000000000000
droMoj3
TCTGAAGACAAC--------------AACAACAA--C-----T---ACTACCA-------------------------------------------------TAGCAACAACTACAGCAACAGCAATAGCAACAATTGCAACAATGGCATTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................CAGCAACAGCAATAGCAAC...........................................................................................................................................................................................................................................................................................19200.051000010
droGri2
AACCACAACAACAA--------------C-------------A---ACAACTACACAAATTCAAAGACAA-ATTGGCGACATAAA-AAT--------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:50 PM