ID:

dsi_25842

 Coordinate:

2r:11881961-11882029 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.2 -5.0 -5.0

Flybase annnotation

CDS [2r_11881791_11881933_+]; three_prime_UTR [2r_11881934_11882484_+]; exon [2r_11881791_11882484_+]

No Repeatable elements found

Sense Strand Reads

#########################################################################################################################################################################
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGAGCATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCAAAAGCAAGAAATATTCTATTTTATTTATACAAAGAAAACCAACCGCAAGCGCATAGTAAAAGCCCAATTCGTAAAAACGAACGT
**************************************************(((((...((((.((((....(((...((.........))..))))))).))))......)))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
TAACGTCGAACCATAAGTTATGAGAAT.............................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.........................................................TATGGCATGTATTATTCGAAGCGAAGC..................................................................................... 27 0 1 2.00 2 0 1 0 0 1 0 0 0 0
..........................................................................................................................................TAGTAAAAGCCCAATTCGTAAAAACGA.... 27 0 1 2.00 2 0 1 0 0 1 0 0 0 0
..........................................................ATGGCATGTATTATTCGAAGCGAA....................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
TAACGTCGAACCATAAGT....................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................TATGGCATGTATTATTCGAAGCGAAG...................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................TGGCATGTATTATTCGAAGCGAAGC..................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..........................TCGTAATCGAGCATTTTCTTATATGTA.................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...............................................................ATGTATTATTCGAAGCGAAG...................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................TTTCTTATATGTATGTATAT............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................TGTATTATTCGAAGCGAAGC..................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1
TAACGTCGAACCATAAGTTATGAG................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................AGAATCGTAATCGAGCATTTTC............................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................TGAGAATCGTAATCGAGCATTTTCTTA.......................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................AGTAAAAGCCCAATTCGTAAAAACGA.... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................ATTCGAAGCGAAGCAAAAGCAAGA........................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................GAAGCAAAAGCAAGAAATATT..................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................ACCGCAAGCGCATAGTAAAAGCCCAA................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
TAACGTCGAACCATAAGTTATGAGA................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................ATAGTAAAAGCCCAATTCGTAAAAACGA.... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..........................................................ATGGCATGTATTATTCGAAGC.......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CGCATAGTAAAAGCCCAATTCGTAAAAA....... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................ATGTATGTATATGGCA......................................................................................................... 16 0 4 0.25 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ATTGCAGCTTGGTATTCAATACTCTTAGCATTAGCTCGTAAAAGAATATACATACATATACCGTACATAATAAGCTTCGCTTCGTTTTCGTTCTTTATAAGATAAAATAAATATGTTTCTTTTGGTTGGCGTTCGCGTATCATTTTCGGGTTAAGCATTTTTGCTTGCA
**************************************************(((((...((((.((((....(((...((.........))..))))))).))))......)))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M024
male body
...............................................................TACATAATAATCTCCTCTTCGT.................................................................................... 22 3 1 1.00 1 1 0 0
.........................................................................................................................................TATCAATTTCGGGTTAA............... 17 1 3 0.33 1 0 1 0
....................................................................................................................CTCATTTGGCTGGCGTTCGC................................. 20 3 3 0.33 1 0 1 0
.................................................................CAGAATAAGCGTGGCTTCG..................................................................................... 19 3 10 0.10 1 0 0 1
...........................................................................................................................................TCATTTTCGTCTTAAGCA............ 18 2 11 0.09 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:11881911-11882079 + dsi_25842 TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAAG------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GT
droSec2 scaffold_1:8704556-8704724 + TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-ATTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAAG------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GT
dm3 chr2R:11211827-11211994 + TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGA-------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAAC--TCAAT--------------TCGTAAAAA----CGAAC-GT
droEre2 scaffold_4845:14652793-14652961 - TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTCTAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGAA------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GT
droYak3 2R:11139655-11139824 + TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGAA------AAATATTCTATT--TTATTTATACAAAG----GA--------------AA--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GT
droEug1 scf7180000409672:72052-72230 + TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAAAAAAAAAAAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAGAACGAACGAAC-GT
droBia1 scf7180000302143:195369-195535 - TAACGTCGAACCATAAGTTATGAGAATCGTAATCAA------------------------------------GCATTTT-CTTATAT--------------------------------G-------AATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGA-------AAATATTCTATT--TTATTTATACAAA-----AC---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAATAA----CGAAC-GT
droTak1 scf7180000410831:92222-92391 - TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTTTCTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGAA------AAATATTCTATT--TTATTTATACAAAG----GA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAATAG----CGAAC-GT
droEle1 scf7180000491214:4075700-4075870 + TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATATAAAG----AA-----AACA------A--------------------------------------------A--CGA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAC--------------TCGTAATTA----CGAAC-GT
droRho1 scf7180000776849:609776-609942 - TAACGTCGAACCATAAGTTATGAGAATCGTAATTGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CAA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAATTA----CGAAC-GT
droFic1 scf7180000453342:709690-709856 - TAACGTCGAACCATAAGTTATGAGAGTCGTAATCGA------------------------------------GCATTTT-CTAATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAA-------AAATATTCTATT--TTATTTATACAAAG----CA------------------------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAACTA----CGAAC-GT
droKik1 scf7180000302476:232003-232209 + TAACGTCGAACCATAAGTTATGAGAATCGTAATTGA------------------------------------GCATTTT-CTTATATATATATATATATATGTATGTGTATATATATATGT-----ATATGTAT-ATGGCATGTATTATTATTCGAAGCGAAGCAAAAGCAAA------AAATATTCTATT--TTATTTATACAATG----AA-----AAC----GAAA--------------------------------------------A--GCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAGCTA----CG------
droAna3 scaffold_13266:7629876-7630083 + TAACGTCGAACCATAAGTTATGAGAGTCGTAATTGA------------------------------------GCATTTT-CTTATAT--------------------------------GT-----ATATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATACGAAG----AA---------------AGA-AAAACAAACAAGTGAGAGAAAAACCGAAATACATC------A--ACA-ACCAAAAG-CGCATAGT-AAAGAAGC--CCAAT--------------TCGTAATTA----CGAAC-GT
droBip1 scf7180000396759:1186505-1186708 - TAACGTCGAACCATAAGTTATGAGAGTCGTAATTGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATACGAAG----AA---------------AAAAAAAACAGAAAACAGAGAGAAAAACCGA--TACA--------T--TAA-ACCGCAAG-CGCATAGT-AAAGAAGC--CCAAT--------------TCGTAACC---TACGAAC-GT
dp5 3:11324896-11325062 + TAACGTCTAACCATAAGTTATGAGAATCATAATCCA------------------------------------G-ATTTT-G-TA-------------------------------------------TATGTATAATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAA-------AAATATTCTATT--TTATTTATACAAC----------AAAACAAAAGAAA--------------------------------------------A--ACATAACGCAAG-CGCATAGTTAA--AAGC--CCAAT---------------------AA----TGAAC-GT
droPer2 scaffold_4:6728244-6728410 + TAACGTCTAACCATAAGTTATGAGAATCATAATCCA------------------------------------G-ATTTT-G-TA-------------------------------------------TATGTATAATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAA-------AAATATTCTATT--TTATTTATACAAC----------AAAACAAAAGAAA--------------------------------------------A--ACATAACGCAAG-CGCATAGTTAA--AAGC--CCAAT---------------------AA----TGAAC-GT
droWil2 scf2_1100000004510:1398413-1398636 + TAACATCAAATCATAAATTATGAGAATCATAATTACAATCAC-------------------------------AATCCT-CTCCTAC--------------------------------A------------AC-AAAGCATGTATTA--ATTCGAAAAGAAGCAAAATTC-----------TATTCTATT-TTTATTTATACAAACTGCAAAAACAAAACAAA----------------AAAAAAAAAGGAAAAACAA-ACAGAACAACAAAAGGAAA-AACGCAAG-CGCATAGTGAA--AAGC--CCAAT---ACTAAGAATAATCATGA--G----AGAAC-GT
droVir3 scaffold_10324:826316-826486 - TAACGTCTAATCATAAATTATGAGAATCATAATCAGAAT-CC---------------------------AA---------CGTATTT--------------------------------C-------AATG--T-ATGGCATGTATT---ATTCGAAGCGAAACAAA-------------ATTATTATATTTTTTATTTATACAAAA----AC---AAAACAAGAG--------------------------------------------------AAA-ACAGCAAGACGCATAGTGAA--AAGCACCCGA------------------CAAAAT----CGAACAGA
droMoj3 scaffold_6496:2677090-2677319 - TAACATCTAATCATAAATTATGAGAATCATAATATA-CACAGATTCCCCTCCCTAGCCACCCACACAAAAACGTATTTT-CTT---T--------------------------------GTATGGCATATATAC-AT-ATATGTATT---ATTCGAAACGAAA----AACAA-------AATTATTATATTTTTTATTTATATAAAA----AA---------------CA--AAAATAGAAATCATAAAAAAAAAACAC--TATA----CAAAAG-AA--------------ATCATTAA--GCAC--CCAGC-------ATA------AA--AAT----TGAACAGA
droGri2 scaffold_15245:8518084-8518247 - TAACGTCGAACCATAAATTATGAGAATCATAATCAGAAT-AC---------------------------AACGTA-TTT-C----------------------------------------------TA--TGT-ATGGCATGTATT---ATTCGAAGCGAAACAAA-------------ATTATTATATT-TTTATTTATACACAA-----------------------------------------------------------------------G-TCCGCAGA-CGTATAGTGAA--TAAC-CCCAACAAAACAAACA------AC--AAT----TGAGCAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAAG------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
TAACGTCGAACCATAAGTTATGAGAAT.................................................................................................................................................................................................................................................................................................................................2713.00303000000000000000
.....................................................................................................................................T-ATGGCATGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2712.00200000011000000000
.....................................................................................................................................................................................................................................................................................................TAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGA.....2712.00200000011000000000
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGCGAA..........................................................................................................................................................................................2412.00202000000000000000
TAACGTCGAACCATAAGT..........................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
.....................................................................................................................................T-ATGGCATGTATT---ATTCGAAGCGAAG.........................................................................................................................................................................................2611.00100000000000001000
........................................................................................................................................TGGCATGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2511.00100000010000000000
..........................TCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TA...........................................................................................................................................................................................................................2711.00100000000100000000
............................................................................................................................................ATGTATT---ATTCGAAGCGAAG.........................................................................................................................................................................................2011.00100000000001000000
............................................................................TTT-CTTATAT--------------------------------G-------TATGTAT-AT...................................................................................................................................................................................................................2011.00101000000000000000
.............................................................................................................................................TGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2011.00100000000000100000
TAACGTCGAACCATAAGTTATGAG....................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
......................AGAATCGTAATCGA------------------------------------GCATTTT-C...........................................................................................................................................................................................................................................................................2211.00100010000000000000
....................TGAGAATCGTAATCGA------------------------------------GCATTTT-CTTA........................................................................................................................................................................................................................................................................2711.00100000000010000000
......................................................................................................................................................................................................................................................................................................AGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGA.....2611.00100000001000000000
......................................................................................................................................................ATTCGAAGCGAAGCAAAAGCAAG------A........................................................................................................................................................................2411.00100010000000000000
...............................................................................................................................................................GAAGCAAAAGCAAG------AAATATT..................................................................................................................................................................2111.00100010000000000000
........................................................................................................................................................................................................................................................................................ACCGCAAG-CGCATAGT-AA--AAGC--CCAA....................................2611.00100000000001000000
TAACGTCGAACCATAAGTTATGAGA...................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
....................................................................................................................................................................................................................................................................................................ATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGA.....2811.00100000000010000000
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGC.............................................................................................................................................................................................2111.00101000000000000000
.................................................................................................................................................................................................................................................................................................CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----........2811.00100000001000000000
.....................................................................................AT--------------------------------G-------TATGTAT-ATGGCA...............................................................................................................................................................................................................1640.25100000000001000000
droSec2
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-ATTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAAG------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................A---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2011.0010100
TAACGTCGAACCATAAGTT.........................................................................................................................................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................AAGCGAAGCAAAAGCAAG------.........................................................................................................................................................................1811.0010010
..............................................................................................................................................................................................................G----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2211.0010010
............ATAAGTTATGAGAATCGTAATCGA------------------------------------GC..................................................................................................................................................................................................................................................................................2611.0010100
.................................................................................................................................................................................................................................................................................A--CCA-ACCGCAAG-CGCATAGT-AC--..............................................2211.0011000
........................AATCGTAATCGA------------------------------------GCATTTT-AT..........................................................................................................................................................................................................................................................................2111.0010100
..................................................................................................................................................................GCAAAAGCAAG------AAATATTCTATT--TT.........................................................................................................................................................2511.0010001
.........................................................................................................................................................CGAAGCGAAGCAAAAGCAAG------.........................................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................................................................................AAG-CGCATAGT-AA--AAGC--CCAAT--------------T....................2311.0010010
......................................................................................................................................................ATTCGAAGCGAAGCAAAAGCAAG------AA.......................................................................................................................................................................2511.0010010
..........................................................................................................................................................GAAGCGAAGCAAAAGCAAG------A........................................................................................................................................................................2011.0010001
TAACGTCGAACCATAAGTTATGAGA...................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGA-------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAAC--TCAAT--------------TCGTAAAAA----CGAAC-GTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................AAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGT-AA--AAAC--TCAAT--------------TCGTAAAAA----CGA.....2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TAT-ATGGCATGTATT---ATTCGAAGCGAA..........................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGCGAA..........................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TT---ATTCGAAGCGAAGCAAAAGCG.................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
.............................................................................................................................................TGTATT---ATTCGAAGCGAAGCA.......................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................TGTAT-ATGGCATGTATT---ATTCGAA...............................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T-ATGGCATGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CATAAGTTATGAGAATCGTAATCGA------------------------------------GC..................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGT-AA--AAAC--TCAAT--------------TCGTAAAAA----........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TT---ATTCGAAGCGAAGCAAAAG...................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATGAGAATCGTAATCGA------------------------------------GCATT...............................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................ACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCA.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GCAAAAGCGA-------AAATATTCTATT--TT.........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................AG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCA.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................AAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCAT......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTCTATT--TTATTTATACAAAG----AT---------------........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AG-CGCATAGT-AA--AAAC--TCAAT--------------TCGTAAAA.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGTAT-ATGGCATGTATT---ATTCGAAGCGA...........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TATGAGAATCGTAATCGA------------------------------------GCA.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................T--------------------------------G-------TATGTAT-ATGGCATGTA...........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCG................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------T............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TATGTAT-ATGGCATGTATT---ATTCGAA...............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................T---ATTCGAAGCGAAGCAAAAGCGA-------AAA......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATAAGTTATGAGAATCGTA.............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................TGTATT---ATTCGAAGCGAAGCAAA.....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TAT--------------------------------G-------TATGTAT-ATGGCATGTA...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGTAT-ATGGCATGTATT---ATTCGAAGC.............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCA.......................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................ATT---ATTCGAAGCGAAGCAA......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............AAGTTATGAGAATCGTAATCGA------------------------------------GC..................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T-ATGGCATGTATT---ATTCGAAGCGAAGCA.......................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................AAC--TCAAT--------------TCGTAAAAA----CGA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TAGT-AA--AAAC--TCAAT--------------TCGTAAAAA----CGAAC-..2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................ATGTATT---ATTCGAAGCGAAGCAAAAGC..................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AGCGAAGCAAAAGCGA-------AAA......................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....TCGAACCATAAGTTATGAGAATCGTA.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-C..........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-....................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTATGAGAATCGTAATCGA------------------------------------GCATT...............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CATAGT-AA--AAAC--TCAAT--------------TCGTA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CGAAGCGAAGCAAAAGCGA-------AAAAT....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................CAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGTTATGAGAATCGTAATCGA------------------------------------GCATT...............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGC................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTCGAACCATAAGTTATGAG....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAACGTCGAACCATAAGTTATGA.....................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................TAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATG.........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCGAACCATAAGTTATGAGAATCG...............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ATTCGAAGCGAAGCAAAAGCG.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
TAACGTCGAACCATAAGTT.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................................................GAAGCGAAGCAAAAGCGA-------AAATATTCT................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAGAATCGTAATCGA------------------------------------GCAT................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................G----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................ATGAGAATCGTAATCGA------------------------------------GCATTTT-CTT.........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TATAT--------------------------------G-------TATGTAT-ATGGCA...............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGCATGTATT---ATTCGAAGCGAAGCA.......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GAAGCGAAGCAAAAGCGA-------A........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TATGAGAATCGTAATCGA------------------------------------GCATTTT-CTT.........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCAT......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................A--CCA-ACCGCAAG-CGCATAG....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................ATGTAT-ATGGCATGTATT---ATTCGAAGC.............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCA-ACCGCAAG-CGCATAGT-AA--AAAC--T.......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................ACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-...........................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TT---ATTCGAAGCGAAGCAAAAGCGA-------.........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................................ATTCGAAGCGAAGCAAAAGCGA-------AAAA.....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................TGAGAATCGTAATCGA------------------------------------GCATT...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACCATAAGTTATGAGAATCGTAA............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................G-------TATGTAT-ATGGCATGTA...........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................A------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATG.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CC......................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GCAAG-CGCATAGT-AA--AAAC--TCAAT--------------TCG..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................CATGTATT---ATTCGAAGCGAAGCA.......................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CAAG-CGCATAGT-AA--AAAC--TCAAT--------------TCG..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............ATAAGTTATGAGAATCGTAATCGA------------------------------------GC..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAT--------------TCGTAAAAA----CGAAC-GT1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTCTAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGAA------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................G----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-..................................................2412.0020000020
.................................................................................TTCTAT--------------------------------G-------TATGTAT-ATGGCATGTATT---......................................................................................................................................................................................................2611.0011000000
.AACGTCGAACCATAAGTTATGA.....................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................G----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2211.0010000100
...................ATGAGAATCGTAATCGA------------------------------------GC..................................................................................................................................................................................................................................................................................1911.0010000100
.AACGTCGAACCATAAGTT.........................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................AT-ATGGCATGTATT---ATTCG.................................................................................................................................................................................................1911.0010000010
.................................................................................................................................................................................................................................................................................A--CCA-ACCGCAAG-CGCATAGT-AA--A.............................................2311.0010000100
.......................................................................................................................................................................................................ATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2911.0011000000
............................................................................................................................................................................................................AAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2411.0011000000
....................................................................................................................................................................................................................................A--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................1911.0010000100
............................................................................................................................................ATGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2111.0010100000
............ATAAGTTATGAGAATCGTAATCGA------------------------------------G...................................................................................................................................................................................................................................................................................2511.0010000010
droYak3
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGAA------AAATATTCTATT--TTATTTATACAAAG----GA--------------AA--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAAAA----CGAAC-GTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................AGT-AA--AAGC--CCAAT--------------TCGTAAAAA----C.......2412.00201100000000
..........................................................................................................................................................................................................CAAAG----GA--------------AA--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................2412.00201000010000
...................................................................................................................................................................................................................................AA--------------------------------------------A--CCA-ACCGCAAG-CGCATA.....................................................2012.00200000020000
.......................................................................................................................................ATGGCATGTATT---ATTCGAA...............................................................................................................................................................................................1911.00101000000000
................................................................................................................................................ATT---ATTCGAAGCGAAGCAAAAGC..................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGCGA...........................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................ATACAAAG----GA--------------AA--------------------------------------------A--CCA-ACCGCAAG-C..........................................................2511.00100000010000
........................................................................................................................................................................................TTCTATT--TTATTTATACAAAG----GA--------------.........................................................................................................................2311.00101000000000
................................................................................CTTATAT--------------------------------G-------TATGTAT-ATGGCATGT............................................................................................................................................................................................................2411.00101000000000
...................................................................................................................................................................................................................................AA--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-..................................................2211.00101000000000
.......GAACCATAAGTTATGAGAATCGT..............................................................................................................................................................................................................................................................................................................................2311.00100100000000
.....................................................................................................................................................................................................TTATACAAAG----GA--------------AA--------------------------------------------A--CCA-ACCGCAAG-CGC........................................................2911.00100000010000
....GTCGAACCATAAGTTATGAGAATC................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.......GAACCATAAGTTATGAGAATCG...............................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................................................................................................................................................................................................A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--C.......................................2811.00101000000000
droEug1
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAAAAAAAAAAAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAAGAACGAACGAAC-GTSizeHit CountTotal NormTotal
No Reads
droBia1
TAACGTCGAACCATAAGTTATGAGAATCGTAATCAA------------------------------------GCATTTT-CTTATAT--------------------------------G-------AATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGA-------AAATATTCTATT--TTATTTATACAAA-----AC---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAATAA----CGAAC-GTSizeHit CountTotal NormTotal
No Reads
droTak1
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTTTCTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCGAA------AAATATTCTATT--TTATTTATACAAAG----GA---------------A--------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAATAG----CGAAC-GTSizeHit CountTotal NormTotal
No Reads
droEle1
TAACGTCGAACCATAAGTTATGAGAATCGTAATCGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATATAAAG----AA-----AACA------A--------------------------------------------A--CGA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAC--------------TCGTAATTA----CGAAC-GTSizeHit CountTotal NormTotal
No Reads
droRho1
TAACGTCGAACCATAAGTTATGAGAATCGTAATTGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATACAAAG----AA---------------A--------------------------------------------A--CAA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAATTA----CGAAC-GTSizeHit CountTotal NormTotal
No Reads
droFic1
TAACGTCGAACCATAAGTTATGAGAGTCGTAATCGA------------------------------------GCATTTT-CTAATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAA-------AAATATTCTATT--TTATTTATACAAAG----CA------------------------------------------------------------A--CCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAACTA----CGAAC-GTSizeHit CountTotal NormTotal
No Reads
droKik1
TAACGTCGAACCATAAGTTATGAGAATCGTAATTGA------------------------------------GCATTTT-CTTATATATATATATATATATGTATGTGTATATATATATGT-----ATATGTAT-ATGGCATGTATTATTATTCGAAGCGAAGCAAAAGCAAA------AAATATTCTATT--TTATTTATACAATG----AA-----AAC----GAAA--------------------------------------------A--GCA-ACCGCAAG-CGCATAGT-AA--AAGC--CCAAT--------------TCGTAGCTA----CG------SizeHit CountTotal NormTotal
No Reads
droAna3
TAACGTCGAACCATAAGTTATGAGAGTCGTAATTGA------------------------------------GCATTTT-CTTATAT--------------------------------GT-----ATATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATACGAAG----AA---------------AGA-AAAACAAACAAGTGAGAGAAAAACCGAAATACATC------A--ACA-ACCAAAAG-CGCATAGT-AAAGAAGC--CCAAT--------------TCGTAATTA----CGAAC-GTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................ATGAGAGTCGTAATTGA------------------------------------GC..................................................................................................................................................................................................................................................................................1912.002000020
................................TTGA------------------------------------GCATTTT-CTTATAT--------------------------------G....................................................................................................................................................................................................................................1911.001000010
.................................................................................................................................................................................................................................................................................A--ACA-ACCAAAAG-CGCATAGT-A.................................................2111.001100000
................GTTATGAGAGTCGTAATTGA------------------------------------GC..................................................................................................................................................................................................................................................................................2211.001000100
..........CCATAAGTTATGAGAGTCGTAATTGA------------------------------------GC..................................................................................................................................................................................................................................................................................2811.001100000
...............................ATTGA------------------------------------GCATTTT-CTTATAT--------------------------------GT-----ATAT..........................................................................................................................................................................................................................2511.001000100
........................................................................................................................................................................................................................................AAAACAAACAAGTGAGAGAAA...............................................................................................2111.001010000
...........................................................................................................................................................................................................................................ACAAACAAGTGAGAGAAAAACC...........................................................................................2211.001010000
TAACGTCGAACCATAAGTTATGA.....................................................................................................................................................................................................................................................................................................................................2311.001001000
............ATAAGTTATGAGAGTCGTA.............................................................................................................................................................................................................................................................................................................................1911.001000010
.......................................................................................................................................................................................................................................................................CATC------A--ACA-ACCAAAAG-CGCATA.....................................................2211.001000010
..............................................................................................................................................GTATT---ATTCGAAGCGAAGCAAAAGC..................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................CATC------A--ACA-ACCAAAAG-CGC........................................................1911.001010000
.....................................................................................................................................................................................................................................................................TACATC------A--ACA-ACCAAAAG-CGC........................................................2111.001010000
TAACGTCGAACCATAAGTTATGAGA...................................................................................................................................................................................................................................................................................................................................2511.001001000
.AACGTCGAACCATAAGTTAT.......................................................................................................................................................................................................................................................................................................................................2011.001000010
..................................................................................................................................GTAT-ATGGCATGTATT---ATTCGAAGC.............................................................................................................................................................................................2511.001000001
.......................................................................................................................................................................................................................................................................CATC------A--ACA-ACCAAAAG-CGCATAGT-AAAGA.............................................2911.001010000
......................................................................................................................................................................................................................................................................................A-ACCAAAAG-CGCATAGT-AAA...............................................2011.001000010
.............................................................................................................................................................................................................................................................................................................GAAGC--CCAAT--------------TCGTAATTA----CGA.....2211.001001000
..............AAGTTATGAGAGTCGTAATTGA------------------------------------GC..................................................................................................................................................................................................................................................................................2411.001000010
droBip1
TAACGTCGAACCATAAGTTATGAGAGTCGTAATTGA------------------------------------GCATTTT-CTTATAT--------------------------------G-------TATGTAT-ATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCA--------AAATATTCTATT--TTATTTATACGAAG----AA---------------AAAAAAAACAGAAAACAGAGAGAAAAACCGA--TACA--------T--TAA-ACCGCAAG-CGCATAGT-AAAGAAGC--CCAAT--------------TCGTAACC---TACGAAC-GTSizeHit CountTotal NormTotal
No Reads
dp5
TAACGTCTAACCATAAGTTATGAGAATCATAATCCA------------------------------------G-ATTTT-G-TA-------------------------------------------TATGTATAATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAA-------AAATATTCTATT--TTATTTATACAAC----------AAAACAAAAGAAA--------------------------------------------A--ACATAACGCAAG-CGCATAGTTAA--AAGC--CCAAT---------------------AA----TGAAC-GTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2612.0020000000020
.........................ATCATAATCCA------------------------------------G-ATTTT-G-T.........................................................................................................................................................................................................................................................................1911.0010000100000
.........................................................................................................................................GGCATGTATT---ATTCGAAGCGAAGC........................................................................................................................................................................................2411.0010000100000
........................................................................G-ATTTT-G-TA-------------------------------------------TATGTATAAT...................................................................................................................................................................................................................1911.0010000100000
.................................................................................................................................................TT---ATTCGAAGCGAAGCAAA.....................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................A--------------------------------------------A--ACATAACGCAAG-CGCAT......................................................1911.0010100000000
...........................................................................................................................................CATGTATT---ATTCGAAGCGAAGCAAAAGC..................................................................................................................................................................................2811.0010010000000
..............................AATCCA------------------------------------G-ATTTT-G-TA-------------------------------------------TATGT........................................................................................................................................................................................................................2011.0010000100000
.................................................................................................................................................................................................................................................................................A--ACATAACGCAAG-CGCATAGTT..................................................2211.0010100000000
droPer2
TAACGTCTAACCATAAGTTATGAGAATCATAATCCA------------------------------------G-ATTTT-G-TA-------------------------------------------TATGTATAATGGCATGTATT---ATTCGAAGCGAAGCAAAAGCAA-------AAATATTCTATT--TTATTTATACAAC----------AAAACAAAAGAAA--------------------------------------------A--ACATAACGCAAG-CGCATAGTTAA--AAGC--CCAAT---------------------AA----TGAAC-GTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................GTATAATGGCATGTATT---ATTC..................................................................................................................................................................................................2112.002200000
droWil2
TAACATCAAATCATAAATTATGAGAATCATAATTACAATCAC-------------------------------AATCCT-CTCCTAC--------------------------------A------------AC-AAAGCATGTATTA--ATTCGAAAAGAAGCAAAATTC-----------TATTCTATT-TTTATTTATACAAACTGCAAAAACAAAACAAA----------------AAAAAAAAAGGAAAAACAA-ACAGAACAACAAAAGGAAA-AACGCAAG-CGCATAGTGAA--AAGC--CCAAT---ACTAAGAATAATCATGA--G----AGAAC-GTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................AGTGAA--AAGC--CCAAT---ACT.............................1811.00100010
......................................................................................................................................................................................................................................................................................A-AACGCAAG-CGCATAGTGAA--A.............................................2111.00100010
.............................................................................................................................................................................................................................................................................................................................CTAAGAATAATCATGA--G----A.......1811.00101000
...................ATGAGAATCATAATTACA.......................................................................................................................................................................................................................................................................................................................1811.00100010
..............................................................................................................................................................................................................................................................AACAA-ACAGAACAACAAAAGGAA......................................................................2311.00100010
......................................................................................................................................................................................................TATACAAACTGCAAAAACAAAAC...............................................................................................................................2311.00101000
......................................TCAC-------------------------------AATCCT-CTCCTAC--------------------------------A------------AC-AAAGCATG.............................................................................................................................................................................................................2811.00101000
................................................................................CTCCTAC--------------------------------A------------AC-AAAGCATGT............................................................................................................................................................................................................1911.00101000
.............................................................................................................................................................................................................................................................................................................................CTAAGAATAATCATGA--G----AGAAC-..2211.00100010
............................................................................CCT-CTCCTAC--------------------------------A------------AC-AAAGC................................................................................................................................................................................................................1811.00101000
......................................................................................................................................................................................................................................................................................A-AACGCAAG-CGCATAGTGAA--AAGC--C.......................................2511.00100100
.......................................CAC-------------------------------AATCCT-CTCCTAC--------------------------------A------------AC-AAAGCATGT............................................................................................................................................................................................................2811.00100010
...................................................................................................................................................................................................................................................................................................CATAGTGAA--AAGC--CCAAT---A...............................1911.00100010
........................................................................................................................................................................................................................................................AGGAAAAACAA-ACAGAAC.................................................................................1811.00100010
.......................................................................................................................A------------AC-AAAGCATGTATTA--ATTCGAAAAGA...........................................................................................................................................................................................2711.00100010
....................................................................................................................................................................................................................................................AAAAAGGAAAAACAA-ACA.....................................................................................1820.50100010
.........................................................................................................................................................................................................................AAACAAA----------------AAAAAAAAAGG.................................................................................................18200.05100010
droVir3
TAACGTCTAATCATAAATTATGAGAATCATAATCAGAAT-CC---------------------------AA---------CGTATTT--------------------------------C-------AATG--T-ATGGCATGTATT---ATTCGAAGCGAAACAAA-------------ATTATTATATTTTTTATTTATACAAAA----AC---AAAACAAGAG--------------------------------------------------AAA-ACAGCAAGACGCATAGTGAA--AAGCACCCGA------------------CAAAAT----CGAACAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................ATACAAAA----AC---AAAACAAGAG--------------------------------------------------........................................................................2012.002000000000000000000000000000002000000000000000000000000000000000
........................AATCATAATCAGAAT-CC---------------------------AA---------............................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................ATAGTGAA--AAGCACCCGA------------------C.................1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGC.............................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................CGTATTT--------------------------------C-------AATG--T-ATGGCA...............................................................................................................................................................................................................1911.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................ATACAAAA----AC---AAAACAAGA...........................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................G--------------------------------------------------AAA-ACAGCAAGACGCATAGT...................................................2111.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AAA-ACAGCAAGACGCATAGT...................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATACAAAA----AC---AAAACAAGAG--------------------------------------------------AAA-ACAGC...............................................................2811.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CGCATAGTGAA--AAGCACCCGA------------------..................2111.001000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................AAGAG--------------------------------------------------AAA-ACAGCAAGACGCATAGT...................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A----AC---AAAACAAGAG--------------------------------------------------AAA-ACAGCAA.............................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................C---------------------------AA---------CGTATTT--------------------------------C-------AATG--T-ATGGCATGT............................................................................................................................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AA-ACAGCAAGACGCATAGTGAA--A.............................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................AA---------CGTATTT--------------------------------C-------AATG--T-ATGGCATG.............................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................ATGGCATGTATT---ATTCGAAGCGAAACA.......................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................ATTT--------------------------------C-------AATG--T-ATGGCATGT............................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TAACATCTAATCATAAATTATGAGAATCATAATATA-CACAGATTCCCCTCCCTAGCCACCCACACAAAAACGTATTTT-CTT---T--------------------------------GTATGGCATATATAC-AT-ATATGTATT---ATTCGAAACGAAA----AACAA-------AATTATTATATTTTTTATTTATATAAAA----AA---------------CA--AAAATAGAAATCATAAAAAAAAAACAC--TATA----CAAAAG-AA--------------ATCATTAA--GCAC--CCAGC-------ATA------AA--AAT----TGAACAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.AACATCTAATCATAAATTAT.......................................................................................................................................................................................................................................................................................................................................2011.001100000
.................................ATA-CACAGATTCCCCTCCCT......................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................ATT---ATTCGAAACGAAA----AACAA-------AATTATT..................................................................................................................................................................2811.001100000
.............................................CCCCTCCCTAGCCACCCACACAAA.......................................................................................................................................................................................................................................................................................2411.001000010
....................................................................................................................................................................................................................................................ATAAAAAAAAAACAC--TATA----CAAAAG-AA--------------........................................................2711.001100000
............ATAAATTATGAGAATCATA.............................................................................................................................................................................................................................................................................................................................1911.001100000
........................................AGATTCCCCTCCCTAGCC..................................................................................................................................................................................................................................................................................................1811.001100000
droGri2
TAACGTCGAACCATAAATTATGAGAATCATAATCAGAAT-AC---------------------------AACGTA-TTT-C----------------------------------------------TA--TGT-ATGGCATGTATT---ATTCGAAGCGAAACAAA-------------ATTATTATATT-TTTATTTATACACAA-----------------------------------------------------------------------G-TCCGCAGA-CGTATAGTGAA--TAAC-CCCAACAAAACAAACA------AC--AAT----TGAGCAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................CAA-----------------------------------------------------------------------G-TCCGCAGA-CGTATAGTG..................................................2111.00110
.........................................................................TA-TTT-C----------------------------------------------TA--TGT-ATGGCATGTATT---ATTCG.................................................................................................................................................................................................2811.00110

Generated: 05/19/2015 at 01:04 AM