ID:

dsi_25821

 Coordinate:

3l:14729959-14730108 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.1 -20.8 -20.7

Flybase annnotation

CDS [3l_14729793_14729958_+]; exon [3l_14729635_14729958_+]; intron [3l_14729959_14741712_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGCTCTTCCCATTATATGATATATGGTGTGTATAGTATATCTTGTTTTCGACATTCGAAAAATGTCTGGTCTCTTATTTTGGCAATTTTTCAATATTTTGCCCATCTGTGCGAGTGTGAGTGTGCGGCGAGTGTCAGTATGTGCATCTATTGTTGTAAGACTGTTGTTGTTGCAAAGGCCACGCGTC
******************************************************.....((((((((.....((((((((...)))))))).....)))...)))))(((((((...)))))))...((....(((.(((...(((((............))))).....))).)))...))...***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M024
male body		 SRR902008
ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
.......TATATCAATATAGATGCTGGA.............................................................................................................................................................................................................................. 21 0 1 3.00 3 0 2 0 1 0 0 0 0 0
.......TATATAAATATAGATGCTGGA.............................................................................................................................................................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0
........ATATCAATATAGATGCTGGA.............................................................................................................................................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...................GATGCTGGAACCTTTTCGCCTT................................................................................................................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0
................ATAGATGCTGGAACCTTTTCGCC................................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 0 0 0 2 0 0 0
...........TAAATATAGATGCTGGAACCT.......................................................................................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0
...................GATGCTGGAACCTTTTCGCCT.................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0
..........................GAACCTTTTCGCCTTATGAG............................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................AGATGCTGGAACCTTTTCGCC................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............AATATAGATGCTGGAAC............................................................................................................................................................................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................TTCGCCTTATGAGCATGGTGA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................CATCTGTGCGAGTGTGAGTG................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................GTTTTCAAGAGCTCTTCCC................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................GCATCTATTGTTGTAAGACTG........................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................AGTGTGAGTGTGCGGCGAGTGT..................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................ATTGTTGTAAGACTGTTGT.................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTTGTAAGAATGTTGTTGTT................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................GAAAAATGTCTGGTCTCTTATTTTGGC........................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................TGCTTGTATTGTCGTAAGACT......................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................TTATTGTAGTAAGACTTTTGTT................... 22 3 7 0.14 1 0 1 0 0 0 0 0 0 0
.............AATATAGGAGCTGGAAC............................................................................................................................................................................................................................ 17 2 15 0.07 1 0 0 0 0 0 0 0 0 1
..................................................................................................................AATTCGGACAATGTCTGGT..................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................CTTGCCCATCTGTGTGA.......................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACTGGGGATATAGTTATATCTACGACCTTGGAAAAGCGGAATACTCGTACCACTCAAAAGTTCTCGAGAAGGGTAATATACTATATACCACACATATCATATAGAACAAAAGCTGTAAGCTTTTTACAGACCAGAGAATAAAACCGTTAAAAAGTTATAAAACGGGTAGACACGCTCACACTCACACGCCGCTCACAGTCATACACGTAGATAACAACATTCTGACAACAACAACGTTTCCGGTGCGCAG
*****************************************************************.....((((((((.....((((((((...)))))))).....)))...)))))(((((((...)))))))...((....(((.(((...(((((............))))).....))).)))...))...****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
...................................................................................................................................................................................ACTCACACGCCGCTCACAGTCAT................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
....................................................CTCAAAAGTTCTCGAGAAGGGTAAT............................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................................................CAGAGAATAAAACCGTTAAAA.................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0
..............TATATCTACGACCTTGGAAAA....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................ACACTCACACGCCGCTCACAGTCAT................................................ 25 0 1 1.00 1 0 0 0 0 0 1 0
......GATATAGTTATATCTACG.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0
................TATCTACGACCTTGGAAAAGC..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
......................................................CAAAAGTTCTCGAGAAGGGTA............................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................................................................ACACACTCACACGCCGCTCACAGTCAT................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................AACGATTGGACACGCTCACAC..................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 1
................................................ACCACTCACTAGTGCTCGAG...................................................................................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0
.....................................................................................................................................GAGAATAAAACAGTT...................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1
........................................ATACTCGTACCGCTCG.................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................AAGGACATTCTGACAA...................... 16 2 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14729909-14730158 + dsi_25821 TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGCTC--TT-------------C---CCATTATATGATATATG-GTGTGT---------------------------------ATAGTATA-T----------------CTTGTTTTCG----------------ACA------TTCGAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGC--------------------GAGTGTGAGTGT---------------GCGGCG----AGTGT------------------------CAGTATGTGCATC--TATTGTTGTAAGA------CT--------------------GTTGTTGTTG-CAAAGGCCACGCGTC
droSec2 scaffold_0:7205608-7205857 + TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGCTC--TT-------------C---CCATTATATGATATATG-GTGTGT---------------------------------ATAGTATA-T----------------CTTGCTTTCG----------------ACA------TTCGAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGC--------------------GAGTGCGAGTGT---------------GCGGCG----AGTGT------------------------CAGTATGTGCATC--TATTGTTGTAAGA------CT--------------------GTTGTTGTTG-CAAAGGCCACGCGTC
dm3 chr3L:15091567-15091813 + TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGGTC--TT-------------C---CCATTATTT--TATATG-GTGTCT---------------------------------ATAGTATG-T----------------CTTGCTTTCG----------------ACA------TTCGAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGC--------------------GAGTGTAAGTGT---------------GCGGCG----AGTGT------------------------CAGTATGTGCATC--TATTGTTGTAAGA------CT--------------------ATTGTTGTTGT--AAAGCCACGCGTC
droEre2 scaffold_4784:15048045-15048309 + TGACCCCTATATCAATATAGATGCTGGAACCTTTTCACCTTATGAGCATGGTGAGTTTTCAAGACCTC--TT------------CC---GCATTA-----TATATGGGTGTGT---------------------------------ATAGTATA-TACAACATGCATATATATTTGCTTTCG----------------ACA------TACGCG---------------------------------------------ATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGT--------------------GAGAGTGAGTGTGTG--------------GGCG----AGTGTCT--------------GTGTCTGCCAGTATGTGCATC--TATTGTTGTAAGGTGCAAGCA--------------------GTTGTTGTTGTCAAAGGTCACGCGGC
droYak3 3L:15184931-15185196 + TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTTAAAAGCTCT-TT-------------C---CCATTA-----TATGTG-----GT---------------------------------ATAGTATA-T----------------ATTGCTTTCG----------------ACA------TTCGGGAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGT--------------------GAGAGTGAGTGTGTGTGCGTGTGTGTT--GGCA----AGTG--------------------TCTGCCAGTATGTGCATC--TATTGTTGTAAGGTGCAAGCA--------------------GTTGTTGTTGTCAAAGGTCACGCGGC
droEug1 scf7180000409177:202570-202854 - CGACCCCTATATCAATATAGATGCTGGAACCTTTTCACCTTATGAGCATGGTGAGTTCTCAAG--TTCA-TT-------------T---GTATTA-----TAGACG-GAGTAT---------------------------------ATAATATG-T----------------A-TGCTCACG----------------ACA------TTAGGGAAAT--GCCTG-T-------------------------A---TTTATTTTGGCAAATTTTCAATATTTCGTGC-------AAG-CTGTAT--AAGAATAAGTGATT--------GTGTGTGT---------------GTGACGTTTCAGTG--------TATCGTTTAGTTCTTGCAAGTATGTGCAAT--TATTGTTGTAAGTTGCAAGAT----------GTGG----ATTTTGTTGTTGCCAAAGGTCACACGAC
droBia1 scf7180000302428:4783037-4783306 - CGACCCGTACATCAACATCGATGCTGGAACCTTTTCGCCCTACGAGCATGGTGAGTTCCCCAG--CGCCTTT-------------C---GCCTTA-----TGTTCG-CTGTGT---------------------------------ATAGTACG-T----------------A-TG-CCGCG----------------CCA------TTAGGGAAAT--GCCTGTC-------------------------GT--TTTATTTTGGCAAAATTTCAATATTTCGCGC-------AT--CTGTGTGTGGGGGTAGGCGACA------G--TGTGTGT----GTGTGTGT---GTGGGA----------------------------TGTGCAAGTATGCGCCTT--CGTTGTGGCAAGATGCAGGCA--------------------GTTGTTGTTGCCAAAGGTCACGCGGA
droTak1 scf7180000415703:166339-166612 + TGACCCCTATATCAATATCGATGCTGGAACCTTTTCGCCATATGAGCATGGTGAGTTCTCAAG--TTCTTTT-------------C---GCATTA-----TATATG-GTGTAT---------------------------------ATAATATG-T----------------A-TGCTCGCG----------------ACA------TTAGGGAAAC--GTCTG-T-------------------------CT--TTTATTTTGGCAAAATTTCAATATTTCGCGT-------AT--CTGTGT--GAGAGTTGGTGATA------T--CGGGTGT------GTGTGTGTT--GACT----GG--------------------TGCTTGCAAGTATGTGCATT--TATTGTTGTAAGGTGCAAGAT-----------------GTTGTTGTTGTTGTCAAAGGTCACGCGGA
droEle1 scf7180000491000:391013-391273 + TGATCCCTATATTAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAG--TTCTTTT------------------TATTA-----T--ATG-GTGTAT---------------------------------ATAATAT-------------------A-CGCCTGCG----------------ACA------TTAGGGAAAT--GTCTG-T-------------------------CTACTTTGTTTTGGCAAATTTTCAATATTTCGCGC-------AT--CTGTTT--CAGAGT----------------GTGTGTGT------GTGTGTGTT--GACG----AGTG--------------------TCTGCAAGTATGTGAATTTTTATTGTTGTACGGTGTAAGCT--------------------GTTGTTGTTGTCAAAGGTCACGCGGC
droRho1 scf7180000779428:63599-63852 - TGATCCCTATATTAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTCTTAAG--TTCT-GT-------------T---ATACTA-----T--ATG-GTGTACATAATATATGTA--GAT------------------------------------------A-TGCCCGCG----------------ACATTACCATTAGGGAAAC--GTCTA----------------------------T--TTTGTTTTGGCAAATTTTCAATATTTCGGGC-------AT--CTGTGT--------------------TAGTGTGT--------------GTGTT--GGCG----AGCGT------------------------CAGTATGTGCATT--TATTGTTATAAGGTGTAAGCT--------------------GTTGTTGTTGTCAAAGGTCACGCG--
droFic1 scf7180000453807:552494-552767 + TGACCCCTACATCAATATTGATGCTGGAACCTTTTCGCCGTACGAGCATGGTGAGTTTTCAAG--TTCT-TT-------------C---ATATTA-----TAT--A-GTGTATAT-------------GT----------------ATATTATG-TAC-----------ATGTGTGCCCGCG----------------ACA------TTAGGGAAAT--GTCTG-T-------------------------CT--TTTATTTTGGCAAATTTTCAATATTTCGAGC-------AT--CTGTGT--------------------GAGCGTGAGTGTGTGAGTGAATGTTTT--AGTG----AGTG--------------------TCTGCAAGTCTGTGCAGT--TATTGTTGTAAGGTGCAAGCT--------------------GTTGTTGTTGTCAAAGGTCACGCGGC
droKik1 scf7180000302383:1258058-1258312 + AGATCCGTACATCAACATCGATGCTGGAACCTTTTCGCCGTACGAGCATGGTGAGTTCCTCG---CTT--TTTGGCTTAACAAT-GTG-----TA-----TACGGG-GGCTATATAATATATGGA--TATA------------------CGCGA-T----------------AGTGCTCGCGGC--------------AAA------GCAGGAAAATCTGTCTGCA-------------------------TT--TTGTTTTTGGCAAATTTTCAATATTGCGCGT-----------T--------------------A--------------------------GT----------------GTTGG--------------TGTGTGCAGGTATGTGCATG---GTAGCTGTAACGG-----GT--------------------CTTGTTGTTGTCAAAGGTCACGCGGC
droAna3 scaffold_13337:17894727-17894998 - CGATCCCTATATCAATATAGATGCTGGAACTTTCTCGCCATATGAGCACGGTGAGTGCTATAA--TTTGTTT-------------A---ATATAATATAA----T---AGCGT---------------------------------ATAGTATA-T------------------CGCTTAAG----------------ACA------GCAGGAAACT--GA-----------------------------------ATTTTTTGGCAAATTTTCAATGTGACACACGGAGAC-AAGTCTG--C--------------------TAGTGTGTGTGT---------------G---TG----AGTGTTTGTATGTATCG----GAATCTGCAGGTACTTGCATA--TAACGTTGCAAGA------TTGTTGTAATGTACGA----ATGTTGTTGTTGTCAAAGGTCACGCG--
droBip1 scf7180000396741:1071432-1071712 - CGATCCCTACATCAATATTGATGCTGGAACCTTTTCGCCATATGAGCACGGTGAGTTCTATAA--TTTGTTT------------TA---ATATTA-----TATATT--TGCGT---------------------------------ATAGTATAGTAT--------------AGCGCTTAAG----------------ACA------GCAGGAAAAG--A------------------------------------ATTTTTTGGCAAATTTTCAATGTGATACACGGAGACAAG--TTGTAT--------------------GTGTGTGTGCGTGTT------TGT----------------GTTTGTATGTATCG----GAATCTGCAGGTACTTGCATT--TAACGTTGCAAGA------TTGTTGTAATGTA-GATGTGTTGTTGTTGTTGTCAAAGGTCACGCG--
dp5 XR_group6:644656-644945 - TGATCCGTACATCAATATAGATGCTGGAACGTTTTCTCCTTACGAGCATGGTGAGTTAATGGG--GCCC------AGTAACAAT-GAAG--------------------ATACATAA-AT--ATAAATATACATTTGCTTAAGAGTAT----------------------------CGTGCA----------------GTA------TCAGGAAAAT--ATCCA-TACATATGTATGTATGTATGTGCATAGA--TTTTTCTTGGCAATTTTTCAATACATCTT---------AT--CTGTATTTGAGGGC----ATCTGTGTGGGTGTA--------------------------------------------------------TACATATATGC--A------------GAAGGTGCCTCC--------TCTC-TCTTTGTTGTTGTTGTTGTCGAAGGTCACGCGGC
droPer2 scaffold_12:1326099-1326402 - TGATCCTTACATCAATATAGATGCTGGAACGTTTTCTCCTTACGAGCATGGTGAGTTAATGGG--GCCC------AGTAACAAT-GAAG--------------------ATACATAA-AT--ATAAATATACATTTGCTTAAGAGTAT----------------------------CGTGCA----------------GTA------TCAGGAAAAT--ATCCA-TACATATGTATGTATGTATGTGCATAGA--TTTTTCTTGGCAATTTTTCAATACATCTT---------AT--CTGTATTTGAGGAC----ATCTGTGTGGGT------------------GTTTC--GATA--------------------------------CATGTATATACATA--TAT-GC-AGAAGGTGCCTCC--------TCTC-TCTTTGTTGTTGTTGTTGTCGAAGGTCACGCGGC
droWil2 scf2_1100000004822:2927371-2927568 - TGATCCCTATATAAATATAGATGCGGGAACATTTTCACCATATGAACATGGTAAGTGCGGAAC--TAAATAC--------GAAA-A---------------------------AAAACATATGTA--CATA------------TGTATAATATAGTA-------------------------G-----------------A------AAAGAAATAT--ATTTA----------------------------G--GAAAATTTGGCAAATTTTCAATATGATTTCC-----------CTGTATAT------------------GTGTGTCTATAT---------------GCA-GG----AATG--------------------CATGCATGTATCT--------AT----------------------------------------------------------------
droVir3 scaffold_13049:17696451-17696508 + TGATCCATATATCAATATCGACGCGGGCACGTTTTCGCCATACGAACATGGTGAGCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:22750752-22750808 + TGACCCATACATTAATATCGACGCGGGTACATTTTCTCCCTATGAGCATGGTAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:14480442-14480685 - TGATCCATACATCAATATCGACGCTGGGACTTTTTCACCATACGAGCATGGTAAGTTTATATAA-ATGTTTT------------AA---ATACTA-----CAT-------------------ATA--TGCA----T----------GCAAAA---------------------AGAAACGACGCAAAAGATTTCTCCCATA------TAAGTGAACT--AA-----------------------------------ATAGTTTGGCGCATTTTCTCTATCT------------------ACAA----ATGTATATTTCTGT--GTGTGTGT--------------GTGTC--TATA----CA--------------------AGTCCGCGGGTATCTTT------GTTTGTGTATT-----GTCT--------------------TTTGTTGTTGCAAA------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGCTC--TT-------------C---CCATTATATGATATATG-GTGTGT---------------------------------ATAGTATA-T----------------CTTGTTTTCG----------------ACA------TTCGAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGC--------------------GAGTGTGAGTGT---------------GCGGCG----AGTGT------------------------CAGTATGTGCATC--TATTGTTGTAAGA------CT--------------------GTTGTTGTTG-CAAAGGCCACGCGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......TATATCAATATAGATGCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000010020000000
........ATATCAATATAGATGCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000000020000000
...................GATGCTGGAACCTTTTCGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000000020000000
................ATAGATGCTGGAACCTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000000000000000
...................GATGCTGGAACCTTTTCGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200100010000000000
..........................GAACCTTTTCGCCTTATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000100000000
..................AGATGCTGGAACCTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.............AATATAGATGCTGGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
.................................TTCGCCTTATGAGCATGGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................C-------AT--CTGTGC--------------------GAGTGTGAGTG.........................................................................................................................................2011.00100000000001000000
......................................................GTTTTCAAGAGCTC--TT-------------C---CC............................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCATC--TATTGTTGTAAGA------CT--------------------G.........................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................AGTGTGAGTGT---------------GCGGCG----AGTGT------------------------..................................................................................2211.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGTAAGA------CT--------------------GTTGT.....................1911.00100000000001000000
..................................................................................................................................................................................................................GAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGC.............................................................................................................................................................................................................2711.00100000010000000000
droSec2
TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGCTC--TT-------------C---CCATTATATGATATATG-GTGTGT---------------------------------ATAGTATA-T----------------CTTGCTTTCG----------------ACA------TTCGAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGC--------------------GAGTGCGAGTGT---------------GCGGCG----AGTGT------------------------CAGTATGTGCATC--TATTGTTGTAAGA------CT--------------------GTTGTTGTTG-CAAAGGCCACGCGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................GTGT---------------GCGGCG----AGTGT------------------------CAGT..............................................................................1911.0010100
..............ATATAGATGCTGGAACCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........ATATCAATATAGATGCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................ATAGATGCTGGAACCTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...........TCAATATAGATGCTGGAACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................TCG----------------ACA------TTCGAAAAAT--GTC.........................................................................................................................................................................................................................................................1911.0010001
.................TAGATGCTGGAACCTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAGAGGTC--TT-------------C---CCATTATTT--TATATG-GTGTCT---------------------------------ATAGTATG-T----------------CTTGCTTTCG----------------ACA------TTCGAAAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGC--------------------GAGTGTAAGTGT---------------GCGGCG----AGTGT------------------------CAGTATGTGCATC--TATTGTTGTAAGA------CT--------------------ATTGTTGTTGT--AAAGCCACGCGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......TATATCAATATAGATGCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.00100000000000000000000000000010000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000001000000
................ATAGATGCTGGAACCTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000001000000000000000000001000100000000
..................AGATGCTGGAACCTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................CTGGAACCTTTTCGCCTTATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............ATATAGATGCTGGAACCTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
...........TCAATATAGATGCTGGAACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000
......CTATATCAATATAGATGCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAGATGCTGGAACCTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000000000000000000000
.............AATATAGATGCTGGAACCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTATGAGCATGGTGAGTTTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................ATTT--TATATG-GTGTCT---------------------------------ATAGT................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATATAGATGCTGGAACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...............TATAGATGCTGGAACCTTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATATAGATGCTGGAACCTTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..........................GAACCTTTTCGCCTTATGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGCTGGAACCTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................CCTTTTCGCCTTATGAGCATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............................................GCATGGTGAGTTTTCAAGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AAAAAT--GTCTGGT-------------------------CT--CTTATTTTGG..............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGAACCTTTTCGCCTTATGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAGATGCTGGAACCTTTTCGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GCCC-------AT--CTGTGC--------------------GAGTGTA.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAGTGT---------------GCGGCG----AGTGT------------------------CAG...............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CTTTTCGCCTTATGAGCATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......TATATCAATATAGATGCTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TATAGATGCTGGAACCTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................TATATG-GTGTCT---------------------------------ATAGTATG-T----------------CTTGCT.....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTTGCCC-------AT--CTGTGC--------------------GAGTGT..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................ATAGATGCTGGAACCTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGACCCCTATATCAATATAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCTGGAACCTTTTCGCCTTATGAGCATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................TGTCT---------------------------------ATAGTATG-T----------------CTTGCTT....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................C-------AT--CTGTGC--------------------GAGTGTAAGTGT---------------G........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TATGAGCATGGTGAGTTTTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATATAGATGCTGGAACCTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTCT---------------------------------ATAGTATG-T----------------CTTGCTTT...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................GCTGGAACCTTTTCGCCTTATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTCGCCTTATGAGCATGGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GTGTCT---------------------------------ATAGTATG-T----------------CTTGCT.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTAAGA------CT--------------------ATTGTTGT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GGCAATTTTTCAATATTT..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATCAATATAGATGCTGGAACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAATATAGATGCTGGAACCTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................TAGATGCTGGAACCTTTTCGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACCTTTTCGCCTTATGAGCATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGA------CT--------------------ATTGTTGTTGT--AAAGCCAC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CAATATTTTGCCC-------AT--CTGTGC--------------------....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CG----AGTGT------------------------CAGTATGTGCATC--T..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...................GATGCTGGAACCTTTTCGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATAGTATG-T----------------CTTGCTTTCG----------------AC...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAGATGCTGGAACCTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AT--GTCTGGT-------------------------CT--CTTATTTTGG..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............AATATAGATGCTGGAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
....................ATGCTGGAACCTTTTCGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GCG----AGTGT------------------------CAGTATGTGCA.......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................GAACCTTTTCGCCTTATGAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............CAATATAGATGCTGGAACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........TCAATATAGATGCTGGAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATATAGATGCTGGAACCTTTTCGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................TTATTT--TATATG-GTGTCT---------------------------------ATAGT................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGAACCTTTTCGCCTTATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CTTGCTTTCG----------------ACA------TTCGA...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGTGC--------------------GAGTGTAAGTGT---------------GCGG.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGCTGGAACCTTTTCGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CTGGT-------------------------CT--CTTATTTTGGCAATT.........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............TATAGATGCTGGAACCTTTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........ATCAATATAGATGCTGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATATCAATATAGATGCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........ATCAATATAGATGCTGGAACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
TGACCCCTATATCAATATAGATGCTGGAACCTTTTCACCTTATGAGCATGGTGAGTTTTCAAGACCTC--TT------------CC---GCATTA-----TATATGGGTGTGT---------------------------------ATAGTATA-TACAACATGCATATATATTTGCTTTCG----------------ACA------TACGCG---------------------------------------------ATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGT--------------------GAGAGTGAGTGTGTG--------------GGCG----AGTGTCT--------------GTGTCTGCCAGTATGTGCATC--TATTGTTGTAAGGTGCAAGCA--------------------GTTGTTGTTGTCAAAGGTCACGCGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................ACCTTTTCACCTTATGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................AGATGCTGGAACCTTTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
........................................................................................................................................................................................................................................................................................................................................................................AGTGTCT--------------GTGTCTGCCAGTATGTG.........................................................................2411.0010000100
.............AATATAGATGCTGGAACCTTTTCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..........ATCAATATAGATGCTGGAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTTAAAAGCTCT-TT-------------C---CCATTA-----TATGTG-----GT---------------------------------ATAGTATA-T----------------ATTGCTTTCG----------------ACA------TTCGGGAAAT--GTCTGGT-------------------------CT--CTTATTTTGGCAATTTTTCAATATTTTGCCC-------AT--CTGTGT--------------------GAGAGTGAGTGTGTGTGCGTGTGTGTT--GGCA----AGTG--------------------TCTGCCAGTATGTGCATC--TATTGTTGTAAGGTGCAAGCA--------------------GTTGTTGTTGTCAAAGGTCACGCGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................TTTCGCCTTATGAGCATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
................ATAGATGCTGGAACCTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..................AGATGCTGGAACCTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....................................................................................................................................................................................................................................................................................................................................GAGTGAGTGTGTGTGCGTGTGTGT..........................................................................................................................2411.00101000000000
...............TATAGATGCTGGAACCTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
........ATATCAATATAGATGCTGGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................GCCTTATGAGCATGGTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
droEug1
CGACCCCTATATCAATATAGATGCTGGAACCTTTTCACCTTATGAGCATGGTGAGTTCTCAAG--TTCA-TT-------------T---GTATTA-----TAGACG-GAGTAT---------------------------------ATAATATG-T----------------A-TGCTCACG----------------ACA------TTAGGGAAAT--GCCTG-T-------------------------A---TTTATTTTGGCAAATTTTCAATATTTCGTGC-------AAG-CTGTAT--AAGAATAAGTGATT--------GTGTGTGT---------------GTGACGTTTCAGTG--------TATCGTTTAGTTCTTGCAAGTATGTGCAAT--TATTGTTGTAAGTTGCAAGAT----------GTGG----ATTTTGTTGTTGCCAAAGGTCACACGACSizeHit CountTotal NormTotal
No Reads
droBia1
CGACCCGTACATCAACATCGATGCTGGAACCTTTTCGCCCTACGAGCATGGTGAGTTCCCCAG--CGCCTTT-------------C---GCCTTA-----TGTTCG-CTGTGT---------------------------------ATAGTACG-T----------------A-TG-CCGCG----------------CCA------TTAGGGAAAT--GCCTGTC-------------------------GT--TTTATTTTGGCAAAATTTCAATATTTCGCGC-------AT--CTGTGTGTGGGGGTAGGCGACA------G--TGTGTGT----GTGTGTGT---GTGGGA----------------------------TGTGCAAGTATGCGCCTT--CGTTGTGGCAAGATGCAGGCA--------------------GTTGTTGTTGCCAAAGGTCACGCGGASizeHit CountTotal NormTotal
No Reads
droTak1
TGACCCCTATATCAATATCGATGCTGGAACCTTTTCGCCATATGAGCATGGTGAGTTCTCAAG--TTCTTTT-------------C---GCATTA-----TATATG-GTGTAT---------------------------------ATAATATG-T----------------A-TGCTCGCG----------------ACA------TTAGGGAAAC--GTCTG-T-------------------------CT--TTTATTTTGGCAAAATTTCAATATTTCGCGT-------AT--CTGTGT--GAGAGTTGGTGATA------T--CGGGTGT------GTGTGTGTT--GACT----GG--------------------TGCTTGCAAGTATGTGCATT--TATTGTTGTAAGGTGCAAGAT-----------------GTTGTTGTTGTTGTCAAAGGTCACGCGGASizeHit CountTotal NormTotal
No Reads
droEle1
TGATCCCTATATTAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTTTCAAG--TTCTTTT------------------TATTA-----T--ATG-GTGTAT---------------------------------ATAATAT-------------------A-CGCCTGCG----------------ACA------TTAGGGAAAT--GTCTG-T-------------------------CTACTTTGTTTTGGCAAATTTTCAATATTTCGCGC-------AT--CTGTTT--CAGAGT----------------GTGTGTGT------GTGTGTGTT--GACG----AGTG--------------------TCTGCAAGTATGTGAATTTTTATTGTTGTACGGTGTAAGCT--------------------GTTGTTGTTGTCAAAGGTCACGCGGCSizeHit CountTotal NormTotal
No Reads
droRho1
TGATCCCTATATTAATATAGATGCTGGAACCTTTTCGCCTTATGAGCATGGTGAGTTCTTAAG--TTCT-GT-------------T---ATACTA-----T--ATG-GTGTACATAATATATGTA--GAT------------------------------------------A-TGCCCGCG----------------ACATTACCATTAGGGAAAC--GTCTA----------------------------T--TTTGTTTTGGCAAATTTTCAATATTTCGGGC-------AT--CTGTGT--------------------TAGTGTGT--------------GTGTT--GGCG----AGCGT------------------------CAGTATGTGCATT--TATTGTTATAAGGTGTAAGCT--------------------GTTGTTGTTGTCAAAGGTCACGCG--SizeHit CountTotal NormTotal
No Reads
droFic1
TGACCCCTACATCAATATTGATGCTGGAACCTTTTCGCCGTACGAGCATGGTGAGTTTTCAAG--TTCT-TT-------------C---ATATTA-----TAT--A-GTGTATAT-------------GT----------------ATATTATG-TAC-----------ATGTGTGCCCGCG----------------ACA------TTAGGGAAAT--GTCTG-T-------------------------CT--TTTATTTTGGCAAATTTTCAATATTTCGAGC-------AT--CTGTGT--------------------GAGCGTGAGTGTGTGAGTGAATGTTTT--AGTG----AGTG--------------------TCTGCAAGTCTGTGCAGT--TATTGTTGTAAGGTGCAAGCT--------------------GTTGTTGTTGTCAAAGGTCACGCGGCSizeHit CountTotal NormTotal
No Reads
droKik1
AGATCCGTACATCAACATCGATGCTGGAACCTTTTCGCCGTACGAGCATGGTGAGTTCCTCG---CTT--TTTGGCTTAACAAT-GTG-----TA-----TACGGG-GGCTATATAATATATGGA--TATA------------------CGCGA-T----------------AGTGCTCGCGGC--------------AAA------GCAGGAAAATCTGTCTGCA-------------------------TT--TTGTTTTTGGCAAATTTTCAATATTGCGCGT-----------T--------------------A--------------------------GT----------------GTTGG--------------TGTGTGCAGGTATGTGCATG---GTAGCTGTAACGG-----GT--------------------CTTGTTGTTGTCAAAGGTCACGCGGCSizeHit CountTotal NormTotal
No Reads
droAna3
CGATCCCTATATCAATATAGATGCTGGAACTTTCTCGCCATATGAGCACGGTGAGTGCTATAA--TTTGTTT-------------A---ATATAATATAA----T---AGCGT---------------------------------ATAGTATA-T------------------CGCTTAAG----------------ACA------GCAGGAAACT--GA-----------------------------------ATTTTTTGGCAAATTTTCAATGTGACACACGGAGAC-AAGTCTG--C--------------------TAGTGTGTGTGT---------------G---TG----AGTGTTTGTATGTATCG----GAATCTGCAGGTACTTGCATA--TAACGTTGCAAGA------TTGTTGTAATGTACGA----ATGTTGTTGTTGTCAAAGGTCACGCG--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........ATCAATATAGATGCTGGAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
CGATCCCTACATCAATATTGATGCTGGAACCTTTTCGCCATATGAGCACGGTGAGTTCTATAA--TTTGTTT------------TA---ATATTA-----TATATT--TGCGT---------------------------------ATAGTATAGTAT--------------AGCGCTTAAG----------------ACA------GCAGGAAAAG--A------------------------------------ATTTTTTGGCAAATTTTCAATGTGATACACGGAGACAAG--TTGTAT--------------------GTGTGTGTGCGTGTT------TGT----------------GTTTGTATGTATCG----GAATCTGCAGGTACTTGCATT--TAACGTTGCAAGA------TTGTTGTAATGTA-GATGTGTTGTTGTTGTTGTCAAAGGTCACGCG--SizeHit CountTotal NormTotal
No Reads
dp5
TGATCCGTACATCAATATAGATGCTGGAACGTTTTCTCCTTACGAGCATGGTGAGTTAATGGG--GCCC------AGTAACAAT-GAAG--------------------ATACATAA-AT--ATAAATATACATTTGCTTAAGAGTAT----------------------------CGTGCA----------------GTA------TCAGGAAAAT--ATCCA-TACATATGTATGTATGTATGTGCATAGA--TTTTTCTTGGCAATTTTTCAATACATCTT---------AT--CTGTATTTGAGGGC----ATCTGTGTGGGTGTA--------------------------------------------------------TACATATATGC--A------------GAAGGTGCCTCC--------TCTC-TCTTTGTTGTTGTTGTTGTCGAAGGTCACGCGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........ATCAATATAGATGCTGGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..................AGATGCTGGAACGTTTTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020110000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTCGAAGGTCACGCG..2111.0010100000000
.........CATCAATATAGATGCTGGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................CATGGTGAGTTAATGGG--GCCC------............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTGTTGTCGAAGGTCACGCG..2511.0010100000000
.......................................................................................................................................................................................................................................................................................ATCTT---------AT--CTGTATTTGAGGGC----............................................................................................................................................................2111.0010001000000
.............................................GCATGGTGAGTTAATGGG--GCC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTCGAAGGTCACG....1911.0010100000000
droPer2
TGATCCTTACATCAATATAGATGCTGGAACGTTTTCTCCTTACGAGCATGGTGAGTTAATGGG--GCCC------AGTAACAAT-GAAG--------------------ATACATAA-AT--ATAAATATACATTTGCTTAAGAGTAT----------------------------CGTGCA----------------GTA------TCAGGAAAAT--ATCCA-TACATATGTATGTATGTATGTGCATAGA--TTTTTCTTGGCAATTTTTCAATACATCTT---------AT--CTGTATTTGAGGAC----ATCTGTGTGGGT------------------GTTTC--GATA--------------------------------CATGTATATACATA--TAT-GC-AGAAGGTGCCTCC--------TCTC-TCTTTGTTGTTGTTGTTGTCGAAGGTCACGCGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................TAGATGCTGGAACGTTTTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............CAATATAGATGCTGGAACGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......TACATCAATATAGATGCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............CAATATAGATGCTGGAACGTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................................GCATGGTGAGTTAATGGG--GCC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTGTTGTTGTCGAAGGTC.......2311.001000001
droWil2
TGATCCCTATATAAATATAGATGCGGGAACATTTTCACCATATGAACATGGTAAGTGCGGAAC--TAAATAC--------GAAA-A---------------------------AAAACATATGTA--CATA------------TGTATAATATAGTA-------------------------G-----------------A------AAAGAAATAT--ATTTA----------------------------G--GAAAATTTGGCAAATTTTCAATATGATTTCC-----------CTGTATAT------------------GTGTGTCTATAT---------------GCA-GG----AATG--------------------CATGCATGTATCT--------AT----------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............TATAGATGCGGGAACATTTTCACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
....CCCTATATAAATATAGATGCGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...................GATGCGGGAACATTTTCACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......TATATAAATATAGATGCGGGAACATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
...................................................................................................................................................................................................................AAATAT--ATTTA----------------------------G--GAAAAT..................................................................................................................................................................................................................1811.00100010
..........ATAAATATAGATGCGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
TGATCCATATATCAATATCGACGCGGGCACGTTTTCGCCATACGAACATGGTGAGCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........ATATCAATATCGACGCGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................TCGACGCGGGCACGTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000010000000000000000000000000000000000000
......ATATATCAATATCGACGCGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
................ATCGACGCGGGCACGTTTTCGCCATAC............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
.GATCCATATATCAATATCGACGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
..........ATCAATATCGACGCGGGCACGTTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...TCCATATATCAATATCGACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000100000000000000000000000
..............ATATCGACGCGGGCACGTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................ATCGACGCGGGCACGTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
.GATCCATATATCAATATCGACGCGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............AATATCGACGCGGGCACGTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................ATCGACGCGGGCACGTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000100000000000000000000000000000
..................CGACGCGGGCACGTTTTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
TGACCCATACATTAATATCGACGCGGGTACATTTTCTCCCTATGAGCATGGTAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGATCCATACATCAATATCGACGCTGGGACTTTTTCACCATACGAGCATGGTAAGTTTATATAA-ATGTTTT------------AA---ATACTA-----CAT-------------------ATA--TGCA----T----------GCAAAA---------------------AGAAACGACGCAAAAGATTTCTCCCATA------TAAGTGAACT--AA-----------------------------------ATAGTTTGGCGCATTTTCTCTATCT------------------ACAA----ATGTATATTTCTGT--GTGTGTGT--------------GTGTC--TATA----CA--------------------AGTCCGCGGGTATCTTT------GTTTGTGTATT-----GTCT--------------------TTTGTTGTTGCAAA------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:07 AM