ID:

dsi_25668

 Coordinate:

2r:11880869-11881018 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.6 -13.6

Flybase annnotation

CDS [2r_11881054_11881135_+]; five_prime_UTR [2r_11881019_11881053_+]; exon [2r_11881019_11881135_+]; intron [2r_11880713_11881018_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CATTTGTATGTTCATATATCACTTACGCGCCTTCGCGCGACGGCGTTCTTATATCATAAATTGATATGTTAACTGCAAACTGTATTACAATGGCCCTATTATCTGGAAATTCACTGACCCTGCCCTGAATCTCGCCCAGCTATTCTTATCGATATGCTTATTTGAAAGACTTCGTCAACTCTACTCGAACTGTTTTTCAGATTGGCTAAGGTTTAATGGATGACACATCAGCACCATGGGAAAGTTACTA
***************************************************************************................(((...........((.(((((............))))).))))).(((((((......)))).)))...(((((((((((((...........))))..)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 M053
female body
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
...........................................................................CAAACTGTATTACAATGGCCC.......................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CTCGAACTGTTTTTCAGAT................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................GTTAACTGCAAACTGTATTACAATGGC............................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................AACTGTATTACAATGGCCCTA........................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGACACATCAGCACCATGGGAAAGT..... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
........................ACGCGCCTTCGCGCGACGGCGT............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................TACTCGAACTGTTTTTCAG.................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................AACTCTACTCGAACTGTTTT...................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATTGGCTAAGGTTTAATGGATGACA......................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................GCTAGGGTTTAATGG............................... 15 1 5 0.40 2 0 0 0 0 0 0 0 0 0 1 1
.....................................................................TAACTACAAACTGTATTATCAT............................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
..................................GCGCGCCGGCGTTGTTA....................................................................................................................................................................................................... 17 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................CCCTGCCCTGAATGTA..................................................................................................................... 16 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0
.......................................................................................................................................................................................................GAATGGCTAAGGTTTCCTG................................ 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTAAACATACAAGTATATAGTGAATGCGCGGAAGCGCGCTGCCGCAAGAATATAGTATTTAACTATACAATTGACGTTTGACATAATGTTACCGGGATAATAGACCTTTAAGTGACTGGGACGGGACTTAGAGCGGGTCGATAAGAATAGCTATACGAATAAACTTTCTGAAGCAGTTGAGATGAGCTTGACAAAAAGTCTAACCGATTCCAAATTACCTACTGTGTAGTCGTGGTACCCTTTCAATGAT
**************************************************................(((...........((.(((((............))))).))))).(((((((......)))).)))...(((((((((((((...........))))..)))))))))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
....................................................................................................................................................................................................AGTCTAACCGATTCCAAATTA................................. 21 0 1 3.00 3 3 0 0 0 0 0
..................................................................................................................ACTGGGACGGGACTTG........................................................................................................................ 16 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................................GCTGGGACGGGACTT......................................................................................................................... 15 1 5 0.40 2 0 2 0 0 0 0
................................................................................................................................................GAATAACTATACGAAT.......................................................................................... 16 1 8 0.25 2 0 0 0 0 1 1
.................................................................................CCTAATGTTACCGGAATA....................................................................................................................................................... 18 2 8 0.25 2 0 0 1 1 0 0
................ATAATGAATGCGCTGCAGCG...................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0
.................................................................................CCTAATGTTACAGGGATA....................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0
..................................................................................................................GCTGGGACGGGACTTGGTG..................................................................................................................... 19 3 12 0.08 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:11880819-11881068 + dsi_25668 C---ATTTGT-----------------------ATGTTC------------ATATATCACTTACGCGC--CTTC-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GACT------TCGTCAACTCT----------AC--TCGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTA
droSec2 scaffold_1:8703464-8703713 + C---ATTTGT-----------------------ATGTTC------------ATATATCACTTACGCGC--CTTC-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GACT------TCGTCAACTCT----------AC--TCGAAC--TG--TTTTTCAGATTGGCTAAGATTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTA
dm3 chr2R:11210754-11211003 + C---ATTTGT-----------------------ATGTTC------------ATATATCACTTACGCGC--CTTC-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGGAA------------GACC------TCGCCAACTCT----------AC--TCGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTA
droEre2 scaffold_4845:14653871-14654128 - C---ATATGT-----------------------ATTTTC----GTATATTAATGTATCACTTACGCGC--CTTA-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-TCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAC---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GAAG------TCGTCAACTCT----------AC--TTGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTA
droYak3 2R:11138497-11138758 + C---ATATGT-----------------------ACATATATTCGTACATTCATGTATCAGTTACGCGC--CTTC-ACACGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCTTTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GAGC------TCGTCAACTCT----------AC--TTGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTA
droEug1 scf7180000409672:70847-71109 + T---ATATGT-----------------------AC---C------------ATATATCACTTACGCGC--CTTC-TCGCGTCGTCGTTCTTATATCATA------------AATTGATATGTTAACTGCCA-----AGT-----------------ATA-------GCAAACTA-----T---ATTA------CAATGGCCGTATTATTATATCTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAATCA--------------------G-TTTAT---CGATATG-TAT-------------------------------GCTCA----------G---------------TTGGAAA------------GCCC------TTGTCAACGCA----------AC--TT---C--CA--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTA
droBia1 scf7180000302143:196399-196656 - C---TCGT-------------------------A-------------------GTATCACTCGCGCGC--CTTC-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGGCT------GT-----------------GCGGC--ATGGCAAACTG-----T---ATTA------CAATGGCACCATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCCACCAAC---------------------ATTTCGCCGATATG-CGC-------------------------------GCTCG--------------------------CTTGAAA------------GCCC------TTGTCAACCCA----------AC--TCGAT-------TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTA
droTak1 scf7180000410831:93428-93700 - T---GTATAT-----------------------GTGTAC------------ATGTATAACTTACGCGC--CTTG-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGGCT------GT-----------------CG-GCGAAAAGCAAACTG-----T---ATTA------CAATGGCATTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCACCCTAC-----------------A--TGTAT---C-----------------------------------------GCCCC--------------------------TTCGGAA------------CCGC------TTGTCAACTCAACGCAACTCAAC--TCGATT--CGATTCTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTA
droEle1 scf7180000491214:4074274-4074533 + C---GTATGT-----------------------GTAC----------------ATATCACTTACGCGC--CTTG-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGCCA------GT-----------------GAG-------GCAAACTG-----T---ATTA------CAATGGCTTTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCCACCA--------------------A-CGTATCGGTGATATGCCAT-------------------------------GCTCA--------------------------TTCGAAA------------CCTC------TTGTCAACTCC----------CT--TT--TT--TA--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTG
droRho1 scf7180000776849:610952-611209 - C---ATATGT-----------------------AT------------------ATATCACTTACGCGC--CTTC-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACAGCCA------GT-----------------GAG-------GCAAACTG-----T---ATTT-----GCAATGGCTTTATTAT-----CTG-GAAA---------------------------------------------TTTACTGA--------CCCTG-CCCTGAA-TCCCGCCCCACCA--------------------T-CGCACAGTTGATATGCTAT-------------------------------TCTCA--------------------------TTCGAAA------------CCCC------TTGTCAACTCC----------CT--TT---T--TA--TTTTTCAGATTGGATAGGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTG
droFic1 scf7180000453342:710539-710789 - C---ATATGT-----------------------ATGC--------------ATATATCACTTACGCGC--CTTC-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGCCA------GT-----------------ACG-------GCAAACTG-----T---ATTA------CAATGGCACTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCCCGCCCTGCCA--------------------C-CGTAT---CGATAT------------------------------------GCTCA--------------------------TTCGAAA------------CCCC---TTCTTGTCAACTCC----------------------CT--TATTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTA
droKik1 scf7180000302476:230539-230836 + C---ATCTGT-----------------------GTGCGG----------CGGCGTATCACTTACGCGC--CTTC-TCGCGGCGGCGTGCTTATATCATA------------AATTGATACGGCGAAT------------------------------------------AACTG-----A---ATTA------CAAAGGCATTATTAT-----CTG-GGAGACGACGACGACGACTCCTCCTTCTCC-------------------ACCGATGA--------CCCTG-CCCCGAAATCACTCCACATTCGCATATCAAAATATGCGGCAGTCGTAT---CCATAC------------------------------------GTGTG--------------------------T--GTAA------------CCC---TCGAC---------------------CG-TTTGCTCACA--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAGCAGCAGCGGCACCATGGGAAAGCTACTA
droAna3 scaffold_13266:7628834-7629157 + CCGTATCATCCGTGATATCCACTGGCCCACTGG-----T------------GTGTATTACTGACGCGCGATTTCTGTTTGGCGGCGTGCTTATATCATA------------AATTGATACATTAACTGCCTTGCCG-ACTGTTGACTGCTG-----------------AATCTG-GCTTT--CGTTA------CAAAGA---AATTAT-----CTGTGGAA---------------------------------------------TTCAGTGA--------CCCTG-CTGC-------------------------------------------------------CATGTCACTCGGAGCATCCCTCCGTGACACCACCGCCC-CTTT--CTCGGCTCCGGATCGGCTGGTCTG-ACACGTTTGTAAA-AACCG---------------C----------AT--TTTGCT--CA--TCTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTA
droBip1 scf7180000396759:1187455-1187741 - T---ATCTTCC---ATATCCACTGGCC-----G-----T------------GTGTATCACTGACGCGCGACTTC-ATTTGGCGGCGTGCTTATATCATA------------AATTGATACATTAACTGCCG------ACTGTTGAAT-CTG-----------------AATCTG-GCGTT---GTTA------CAAAGA---AATTAT-----CTG-AGAA---------------------------------------------TTCAGTGA--------CCCTG-CCATGT-----C-----------------------------------------------------AGGCCGCGCATCCCACCGCGACGCCTCCGCCC-CTTTTACTCGG----------------CTG-ACACGTTTGTAAA-AACCG---------------C----------AT--TTTACT--CA--TCTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTA
dp5 3:11323969-11324186 + C---GTATGT-----------------------ACGTGT------------ATG----GATT--GCGC--CTCC-TCGTGGCAAAGTATTCATTT------------------TTGATACGTAAACTCCCA------TC-----------------CA-G------------------------------------------CACTAT-----CCG-CAAA---------------------------------------------CCCACTGA--------CCCTGGCTCTGGC-TCTATTCCAATAGAC-----------------A--CTTAT---C--------------------------------------------------------------------TACTT------ATGTATATGTAT-ATCACTTT----------------------ACA-TTTATT--CA--ATTTACAGATTGGCTAGGGTTTGATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTA
droPer2 scaffold_4:6727317-6727534 + C---GTATGT-----------------------ACGTGT------------ATG----GATT--GCGC--CTCC-TCGTGGCAACGTATTTATTT------------------TTGATACGTGAACTCCCA------TC-----------------CA-G------------------------------------------CACTAT-----CTG-CAAA---------------------------------------------CCAACTGA--------CCCTGGCTCTGGC-TCTATTCCAATAGAC-----------------A--CTTAT---C--------------------------------------------------------------------TACTT------ATGTATATGTAT-ATCACTTT----------------------ACA-TTTATT--CA--ATTTACAGATTGGCTAGGGTTTGATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTA
droWil2 scf2_1100000004510:1397137-1397321 + T---GTATAT-----------------------ATGTGT-----------------------GTGTGT--GTTT-GTGTGTGGGTGCCTACATATCATT------------GATTGATAGGAGAATCTCCG-----AG--------------------------------AT----------------------------------------------TAA---------------------------------------------TTTACTCA--------TTCTC-ATTTGGT-TTTGGT-----------------------------------------------------------------------------------------------------------------------------------------------T--------------------ACGGTT--TG--GTTTGCAGATTGGCCAACATTTGATGGATGACGACACATCATCAACATTATCATCGA---------CATCATGGGCAAGCTTTTA
droVir3 scaffold_10324:827179-827439 - C---GTGTGT-----------------------ATGCGT------------GTGT-----GTGCGCGC--CTT----GTAGCGGCATGCTTATATCACACACAACACACAAAATTGATACGATAACTTGCC------CT-----------GAGTCTGTG-------GCAG-TTA-----TAGCATTA------CAATGACATTATCA--------T-AAAA-------------------TTT----GCCAGCAACTTCTGTAAAGCT-------------------------------T-------A---------ATATAT---------ATCT-----AGATG-GA-----------------------------------------------------------TGCAT------ATATATACATAT-ATTAATAT----------------------GCATTTTGTT--T---GGTTTCAGTTTGGCCAGCGTTTAATGGATGACA------------------CATC------------ATCATGGGAAAGCTATTA
droMoj3 scaffold_6496:2678403-2678657 - C---ATATGT-----------------------AGA---------------GTGTA-CATGTGTGTGT--GTGT-GTGTGGCGGCATGCTTATATCACATACAATA-ATAAAATTGATA-----------------------------------------------GCA-GTTA-----T---ATTACAATG-----AAATTTATCA--------T-GACA-------------------TTTTTTCGCTGGCAACTTTTGTATAGCTCTCTGACCGCTTGACCCGA-------G-CTGC-------A---------ATATAT---------CTCT---C--------------------------------------------------------------------TGTCC------ATATGTGCATAT-AGTA--------------------------AT--CTGATT--TG--TCTTGCAGTTTGGCCAACGTTTAATGGATGACA------------------CATC------------ATCATGGGAAAGTTATTA
droGri2 scaffold_15245:8518932-8519160 - T---ATTTGT-----------------------GTGTGT------------GTGTGT---GTGCGGGC--CCA----GTTGCGGCATGCTTATATCACA------------C----ATACGATAACTCCTC---CAACT-----------------GA--------GCAGTTTATTCATT---AATA------CAATCATGACATTAT-----CAA-GAAA-------------------TTC----GCCAACG----------AGCGAGCTGACCGCATGACCTTA-------A-CT-------GCAA--------------------TTTTTA-----AATATG-TGT-------------------------------GTTT---------------------------------------------------------------------------------------------ACTTGCAGTTTGGCCAGCGTTTAATGGATGACA------------------CATC------------ATCATGGGAAAGCTATTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
C---ATTTGT-----------------------ATGTTC------------ATATATCACTTACGCGC--CTTC-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GACT------TCGTCAACTCT----------AC--TCGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................C---------------------------------------AAACTG-----T---ATTA------CAATGGCCC.........................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TCGAAC--TG--TTTTTCAGAT...........................................................................1911.00100001000000000000
........................................................................................................................GTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGC...........................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................................................................AACTG-----T---ATTA------CAATGGCCCTA.......................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACA------------------CATCAG---------CACCATGGGAAAGT.....2511.00100000010000000000
..............................................................ACGCGC--CTTC-GCGCGACGGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------AC--TCGAAC--TG--TTTTTCAG.............................................................................1911.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCT----------AC--TCGAAC--TG--TTTT.................................................................................2011.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTAAGGTTTAATGGATGACA------------------..................................2511.00100000000000100000
droSec2
C---ATTTGT-----------------------ATGTTC------------ATATATCACTTACGCGC--CTTC-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GACT------TCGTCAACTCT----------AC--TCGAAC--TG--TTTTTCAGATTGGCTAAGATTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAAGATTTAATGGATG.......................................................1911.0011000
.......................................................................................................................................................................................................................................................................................................................................................AT------------------------------------GCTTA--------------------------TTTGAAA------------GACT------TCGTCAAC..................................................................................................................2611.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------CATCAG---------CACCATGGGAAA.......2011.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------CATCAG---------CACCATGGGA.........1911.0010010
dm3
C---ATTTGT-----------------------ATGTTC------------ATATATCACTTACGCGC--CTTC-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGGAA------------GACC------TCGCCAACTCT----------AC--TCGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------CATCAG---------CACCATGGGAAAG......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGGATGACA------------------CATCAG---------CACCATGGG..........2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CACCATGGGAAAGTTACT.2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATGACA------------------CATCAG---------CACCATGGGA.........2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AT------------------------------------GCTTA--------------------------TTTGGAA------------GACC------TCG.......................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACA------------------CATCAG---------CACCATGGGAAA.......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................AAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-T..........................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGGAAAGT.....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCT----------AC--TCGAAC--TG--TTTTTCA..............................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGCTAAGGTTTAATGGATGACA------------------C.................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGACA------------------CATCAG---------CACC...............1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGGAAA.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAATGGATGACA------------------CATC..............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAACTCT----------AC--TCGAAC--TG--T....................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATGACA------------------CATCAG---------CACC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CACCATGGGAAAGTTAC..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGATTGGCTAAGGTTTAAT............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTAAGGTTTAATGGA.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................A--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGG..................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-T..........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG---------CACCATGGGAAAGTT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------CATCAG---------CACCATGGGAAAG......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGGAA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGGAAAG......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGGTTTAATGGATGA......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGGTTTAATGGATGACA------------------CATCA.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAACTCT----------AC--TCGAAC--TG--.....................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTAAGGTTTAATGGATGACA------------------..................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................TG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-T..........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------CATCAG---------CACCATGGGA.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTAAGGTTTAATGGATG.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------CACCATGGGAAAGTTACT.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------CATCAG---------CACCATGGGAA........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................ACGCGC--CTTC-GCGCGACGGCGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------CATCAG---------CACCATGGGAA........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------CACCATGGGAAAG......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCT----------AC--TCGAAC--TG--TTTTTC...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGTTTAATGGATGACA------------------CATCAG---------...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CTGA--------CCCTG-CCCTGAA-TCTCG......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGGTTTAATGGATGACA------------------C.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACA------------------CATCAG---------CACCATGG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGAA-TCTCGCCCAGCTA--------------------TTC.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TTTTTCAGATTGGCTAAGG..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ATATCACTTACGCGC--CTTC-GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------CATCAG---------CACCATGGGAAAGTT....2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACA------------------CATCAG---------CACCAT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CCCTG-CCCTGAA-TCTCGCCCAGCT...............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------TTTGGAA------------GACC------TCGCCAACTC................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAG---------CACCATGGGAAAGTTAC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACA------------------CATCAG---------CACCATGGGA.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GGAA------------GACC------TCGCCAACTCT----------AC--TC...............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTAAGGTTTAATGGATG.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCT----------AC--TCGAAC--TG--TTTTTCAG.............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCT----------AC--TCGAAC--TG--TTTT.................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------CATCAG---------CACCATGGGAAA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGGAA------------GA..................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................TTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGC...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CTG-CCCTGAA-TCTCGCATC..................................................................................................................................................................................................................................................................19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
C---ATATGT-----------------------ATTTTC----GTATATTAATGTATCACTTACGCGC--CTTA-GCGCGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCCCTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-TCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAC---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GAAG------TCGTCAACTCT----------AC--TTGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGGAAA.......2211.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGGA.........2011.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGGATGACA------------------CATCAG---------CAC................2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------CACCATGGGAAAGT.....1911.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGGATGACA------------------CATCAG---------CACC...............2311.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCT----------AC--TTGAAC--TG--TTTTTCAG.............................................................................2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG---------CACCATGGGAAAGTTACT.2411.0010001000
droYak3
C---ATATGT-----------------------ACATATATTCGTACATTCATGTATCAGTTACGCGC--CTTC-ACACGACGGCGTTCTTATATCATA------------AATTGATATGTTAACTGC---------------------------------------AAACTG-----T---ATTA------CAATGGCTTTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAGCTA--------------------TTCTTAT---CGATAT------------------------------------GCTTA--------------------------TTTGAAA------------GAGC------TCGTCAACTCT----------AC--TTGAAC--TG--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGTTACTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................G-----T---ATTA------CAATGGCTTTATTAT-----CT............................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT----------AC--TTGAAC--TG--TTTTTCAG.............................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------CACCATGGGAAAGT.....1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATGACA------------------CATCAG---------CACC...............2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTAAGGTTTAATGGATG.......................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTAAGGTTTAATGGATGACA------------------C.................................2411.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATCAG---------CACCATGGG..........1911.00101000000000
droEug1
T---ATATGT-----------------------AC---C------------ATATATCACTTACGCGC--CTTC-TCGCGTCGTCGTTCTTATATCATA------------AATTGATATGTTAACTGCCA-----AGT-----------------ATA-------GCAAACTA-----T---ATTA------CAATGGCCGTATTATTATATCTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCAATCA--------------------G-TTTAT---CGATATG-TAT-------------------------------GCTCA----------G---------------TTGGAAA------------GCCC------TTGTCAACGCA----------AC--TT---C--CA--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTASizeHit CountTotal NormTotal
No Reads
droBia1
C---TCGT-------------------------A-------------------GTATCACTCGCGCGC--CTTC-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGGCT------GT-----------------GCGGC--ATGGCAAACTG-----T---ATTA------CAATGGCACCATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCCACCAAC---------------------ATTTCGCCGATATG-CGC-------------------------------GCTCG--------------------------CTTGAAA------------GCCC------TTGTCAACCCA----------AC--TCGAT-------TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTASizeHit CountTotal NormTotal
No Reads
droTak1
T---GTATAT-----------------------GTGTAC------------ATGTATAACTTACGCGC--CTTG-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGGCT------GT-----------------CG-GCGAAAAGCAAACTG-----T---ATTA------CAATGGCATTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCACCCTAC-----------------A--TGTAT---C-----------------------------------------GCCCC--------------------------TTCGGAA------------CCGC------TTGTCAACTCAACGCAACTCAAC--TCGATT--CGATTCTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTASizeHit CountTotal NormTotal
No Reads
droEle1
C---GTATGT-----------------------GTAC----------------ATATCACTTACGCGC--CTTG-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGCCA------GT-----------------GAG-------GCAAACTG-----T---ATTA------CAATGGCTTTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCTCGCCCCACCA--------------------A-CGTATCGGTGATATGCCAT-------------------------------GCTCA--------------------------TTCGAAA------------CCTC------TTGTCAACTCC----------CT--TT--TT--TA--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTGSizeHit CountTotal NormTotal
No Reads
droRho1
C---ATATGT-----------------------AT------------------ATATCACTTACGCGC--CTTC-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACAGCCA------GT-----------------GAG-------GCAAACTG-----T---ATTT-----GCAATGGCTTTATTAT-----CTG-GAAA---------------------------------------------TTTACTGA--------CCCTG-CCCTGAA-TCCCGCCCCACCA--------------------T-CGCACAGTTGATATGCTAT-------------------------------TCTCA--------------------------TTCGAAA------------CCCC------TTGTCAACTCC----------CT--TT---T--TA--TTTTTCAGATTGGATAGGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTGSizeHit CountTotal NormTotal
No Reads
droFic1
C---ATATGT-----------------------ATGC--------------ATATATCACTTACGCGC--CTTC-GCGCGTCGGCGTTCTTATATCATA------------AATTGATATGTTAACTGCCA------GT-----------------ACG-------GCAAACTG-----T---ATTA------CAATGGCACTATTAT-----CTG-GAAA---------------------------------------------TTCACTGA--------CCCTG-CCCTGAA-TCCCGCCCTGCCA--------------------C-CGTAT---CGATAT------------------------------------GCTCA--------------------------TTCGAAA------------CCCC---TTCTTGTCAACTCC----------------------CT--TATTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAG---------CACCATGGGAAAGCTACTASizeHit CountTotal NormTotal
No Reads
droKik1
C---ATCTGT-----------------------GTGCGG----------CGGCGTATCACTTACGCGC--CTTC-TCGCGGCGGCGTGCTTATATCATA------------AATTGATACGGCGAAT------------------------------------------AACTG-----A---ATTA------CAAAGGCATTATTAT-----CTG-GGAGACGACGACGACGACTCCTCCTTCTCC-------------------ACCGATGA--------CCCTG-CCCCGAAATCACTCCACATTCGCATATCAAAATATGCGGCAGTCGTAT---CCATAC------------------------------------GTGTG--------------------------T--GTAA------------CCC---TCGAC---------------------CG-TTTGCTCACA--TTTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATCAGCAGCAGCGGCACCATGGGAAAGCTACTASizeHit CountTotal NormTotal
No Reads
droAna3
CCGTATCATCCGTGATATCCACTGGCCCACTGG-----T------------GTGTATTACTGACGCGCGATTTCTGTTTGGCGGCGTGCTTATATCATA------------AATTGATACATTAACTGCCTTGCCG-ACTGTTGACTGCTG-----------------AATCTG-GCTTT--CGTTA------CAAAGA---AATTAT-----CTGTGGAA---------------------------------------------TTCAGTGA--------CCCTG-CTGC-------------------------------------------------------CATGTCACTCGGAGCATCCCTCCGTGACACCACCGCCC-CTTT--CTCGGCTCCGGATCGGCTGGTCTG-ACACGTTTGTAAA-AACCG---------------C----------AT--TTTGCT--CA--TCTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGGATGACA------------------CATC------------ACCATGGGAA........2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATGACA------------------CATC------------ACCATGGGAAAGC.....2811.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATC------------ACCATGGGAAAGCTACT.2511.001000010
droBip1
T---ATCTTCC---ATATCCACTGGCC-----G-----T------------GTGTATCACTGACGCGCGACTTC-ATTTGGCGGCGTGCTTATATCATA------------AATTGATACATTAACTGCCG------ACTGTTGAAT-CTG-----------------AATCTG-GCGTT---GTTA------CAAAGA---AATTAT-----CTG-AGAA---------------------------------------------TTCAGTGA--------CCCTG-CCATGT-----C-----------------------------------------------------AGGCCGCGCATCCCACCGCGACGCCTCCGCCC-CTTTTACTCGG----------------CTG-ACACGTTTGTAAA-AACCG---------------C----------AT--TTTACT--CA--TCTTTCAGATTGGCTAAGGTTTAATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTASizeHit CountTotal NormTotal
No Reads
dp5
C---GTATGT-----------------------ACGTGT------------ATG----GATT--GCGC--CTCC-TCGTGGCAAAGTATTCATTT------------------TTGATACGTAAACTCCCA------TC-----------------CA-G------------------------------------------CACTAT-----CCG-CAAA---------------------------------------------CCCACTGA--------CCCTGGCTCTGGC-TCTATTCCAATAGAC-----------------A--CTTAT---C--------------------------------------------------------------------TACTT------ATGTATATGTAT-ATCACTTT----------------------ACA-TTTATT--CA--ATTTACAGATTGGCTAGGGTTTGATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTAGGGTTTGATGGATG.......................................................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGACA------------------CATC------------ACCATGGGAAA.......2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGGATGACA------------------CATC------------ACCATGG...........2411.0010100000000
droPer2
C---GTATGT-----------------------ACGTGT------------ATG----GATT--GCGC--CTCC-TCGTGGCAACGTATTTATTT------------------TTGATACGTGAACTCCCA------TC-----------------CA-G------------------------------------------CACTAT-----CTG-CAAA---------------------------------------------CCAACTGA--------CCCTGGCTCTGGC-TCTATTCCAATAGAC-----------------A--CTTAT---C--------------------------------------------------------------------TACTT------ATGTATATGTAT-ATCACTTT----------------------ACA-TTTATT--CA--ATTTACAGATTGGCTAGGGTTTGATGGATGACA------------------CATC------------ACCATGGGAAAGCTACTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................AA---------------------------------------------CCAACTGA--------CCCTGGCTCTGGC-T..........................................................................................................................................................................................................................................................................2411.001100000
droWil2
T---GTATAT-----------------------ATGTGT-----------------------GTGTGT--GTTT-GTGTGTGGGTGCCTACATATCATT------------GATTGATAGGAGAATCTCCG-----AG--------------------------------AT----------------------------------------------TAA---------------------------------------------TTTACTCA--------TTCTC-ATTTGGT-TTTGGT-----------------------------------------------------------------------------------------------------------------------------------------------T--------------------ACGGTT--TG--GTTTGCAGATTGGCCAACATTTGATGGATGACGACACATCATCAACATTATCATCGA---------CATCATGGGCAAGCTTTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATGGATGACGACACAT..............................................2112.00200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATGGATGACGACAC................................................1912.00200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCAACATTTGATGGAT........................................................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACACATCATCAACATT....................................2011.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTATCATCGA---------CATCATGGGC.........2511.00101000
........................................................................................................................................................................................................................................................................................................TTTGGT-----------------------------------------------------------------------------------------------------------------------------------------------T--------------------ACGGTT--TG--GTTTGCAG.............................................................................2311.00100001
........................................................................................................................................................................................................................................................................................................TTTGGT-----------------------------------------------------------------------------------------------------------------------------------------------T--------------------ACGGTT--TG--GTTTGC...............................................................................2111.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGATGGATGACGACACAT..............................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTTGATGGATGACGACACATCAT...........................................2711.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATGGATGACGACACATC.............................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATCATCAACATTATCATCGA---------C..................2411.00110000
..................................TGTGT-----------------------GTGTGT--GTTT-GTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.10202000
droVir3
C---GTGTGT-----------------------ATGCGT------------GTGT-----GTGCGCGC--CTT----GTAGCGGCATGCTTATATCACACACAACACACAAAATTGATACGATAACTTGCC------CT-----------GAGTCTGTG-------GCAG-TTA-----TAGCATTA------CAATGACATTATCA--------T-AAAA-------------------TTT----GCCAGCAACTTCTGTAAAGCT-------------------------------T-------A---------ATATAT---------ATCT-----AGATG-GA-----------------------------------------------------------TGCAT------ATATATACATAT-ATTAATAT----------------------GCATTTTGTT--T---GGTTTCAGTTTGGCCAGCGTTTAATGGATGACA------------------CATC------------ATCATGGGAAAGCTATTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACA------------------CATC------------ATCATGGGAAAG......2313.003000000030000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACA------------------CATC------------ATCATGGGAAAGCTA...2511.001000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................A-----TAGCATTA------CAATGACATTATC.....................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC------------ATCATGGGAAAGCTAT..2011.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGATGACA------------------CATC------------ATCATGGGAA........2611.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCCAGCGTTTAATGGATGAC.....................................................2411.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATC------------ATCATGGGAA........1811.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATC------------ATCATGGGAAA.......1911.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATGACA------------------CATC------------ATCATGGGAAAGCT....2911.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCCAGCGTTTAATGGATGACA------------------CA................................2711.001000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTAATGGATGACA------------------CATC------------A.................2311.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATCT-----AGATG-GA-----------------------------------------------------------TGCAT------ATATATACATA.....................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000010000
droMoj3
C---ATATGT-----------------------AGA---------------GTGTA-CATGTGTGTGT--GTGT-GTGTGGCGGCATGCTTATATCACATACAATA-ATAAAATTGATA-----------------------------------------------GCA-GTTA-----T---ATTACAATG-----AAATTTATCA--------T-GACA-------------------TTTTTTCGCTGGCAACTTTTGTATAGCTCTCTGACCGCTTGACCCGA-------G-CTGC-------A---------ATATAT---------CTCT---C--------------------------------------------------------------------TGTCC------ATATGTGCATAT-AGTA--------------------------AT--CTGATT--TG--TCTTGCAGTTTGGCCAACGTTTAATGGATGACA------------------CATC------------ATCATGGGAAAGTTATTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................CTGC-------A---------ATATAT---------CTCT---C--------------------------------------------------------------------TGTCC------ATATGT..........................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTCC------ATATGTGCATAT-AGTA--------------------------AT--CTGA.............................................................................................2611.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA------------------CATC------------ATCATGGGAAA.......1911.001100000
droGri2
T---ATTTGT-----------------------GTGTGT------------GTGTGT---GTGCGGGC--CCA----GTTGCGGCATGCTTATATCACA------------C----ATACGATAACTCCTC---CAACT-----------------GA--------GCAGTTTATTCATT---AATA------CAATCATGACATTAT-----CAA-GAAA-------------------TTC----GCCAACG----------AGCGAGCTGACCGCATGACCTTA-------A-CT-------GCAA--------------------TTTTTA-----AATATG-TGT-------------------------------GTTT---------------------------------------------------------------------------------------------ACTTGCAGTTTGGCCAGCGTTTAATGGATGACA------------------CATC------------ATCATGGGAAAGCTATTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:59 AM