ID:

dsi_25592

 Coordinate:

2r:14739680-14739829 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.4 -14.4

Flybase annnotation

five_prime_UTR [2r_14739581_14739679_-]; exon [2r_14739328_14739679_-]; intron [2r_14739680_14740811_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCATCCTCATGAGCGGCTATAAAAGCAGCGACTCTGGCTTCTTCAATTTCATTTCATCATTACGATGCAAGCAGTTAACACGCGCCAGAAGACTAATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTTTACCAGCGTCTCCAAGCGACAGCACCTTCTAACCGGACGCACTTGCTCTCTATTACTTGCAGAACTCACCAAACATCAAGCATCACCATCGACCTGCACACTCACACACAGA
**********************************************************************************(((..((....))..)))....(((.(((.....))).))).....(((.((.........(((((.......))).)).........)).)))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 O002
Head
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
..................................................................................GCGCCAGAAGACTAATGC...................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGCACCTTCTAACCGGAC.......................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCAGAACTCACCAAACATCAAGCATCACC......................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................GTTAACACGCGCCAGAAGACT........................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CAGCACCTTCTAACCGGAC.......................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGCAGAACTCACCAAACATCAAGC............................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................ATGCAAGCAGTTAACACG....................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TCTCTATTACTTGCAGAACTCACCAAACA..................................... 29 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.........................................................TCATTACGATGCAAGCAGTTA............................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................CCATCGACCTGCACACTCA........ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
................................................................................ACGCGCCAGAAGACTAATG....................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................CAAGCAGTTAACACGCGCCAGA................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................TAGGATAGGTCGGGATT................................................................................................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................CTCTATTACTTGCAGAACT.............................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................GCCAAATGGGCGTAGGATAGGTCGGGA................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CACCATCGACCTGCACACTC......... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................AATGGGCGTAGGATAGGTCGGGA................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GACAGCACCTTCTAACCGGACG......................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................ACCGGACGCACTTGCTCTC.............................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................CTAAGCCAAATGGGCGTAGGA............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................ACTTGCAGAACTCACCAAACA..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GACAGCACCTTCTAACCGGAC.......................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................CACGCGCCAGAAGACTAATG....................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................CAGAAGACTAATGCACAAC................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................ACCATCGACCTGCACACTCACACACA.. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................CACAACTAAGCCAAATGGGC................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GCGTAGTGTAGGTCGG..................................................................................................................... 16 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................ATCGGCCTGGACACTCA........ 17 2 17 0.12 2 0 0 0 0 2 0 0 0 0 0 0
.....................................................TTCATCATTACGATA...................................................................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................TAAGCCAGATGGACGT................................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ACAGAACTCACCAAA....................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................TGGTCTCCAAGGGACAGCA........................................................................................ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAGTAGGAGTACTCGCCGATATTTTCGTCGCTGAGACCGAAGAAGTTAAAGTAAAGTAGTAATGCTACGTTCGTCAATTGTGCGCGGTCTTCTGATTACGTGTTGATTCGGTTTACCCGCATCCTATCCAGCCCTAAAATGGTCGCAGAGGTTCGCTGTCGTGGAAGATTGGCCTGCGTGAACGAGAGATAATGAACGTCTTGAGTGGTTTGTAGTTCGTAGTGGTAGCTGGACGTGTGAGTGTGTGTCT
**************************************************************************(((..((....))..)))....(((.(((.....))).))).....(((.((.........(((((.......))).)).........)).)))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
...............................................................................................................................................CTCAGAGGTTCGCTGTGGT........................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................TGGTGATTCGGTGTACCCG................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0
...............CCGATGTTTGAGTCGCTGAGA...................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................CCAGTCCTAGAATGGTCG......................................................................................................... 18 2 4 0.25 1 0 0 0 1 0 0
.....................................................................................................GGTGATTCGGTGTACCCG................................................................................................................................... 18 2 4 0.25 1 0 1 0 0 0 0
...................................ACCGAAGAAGTTAAA........................................................................................................................................................................................................ 15 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................CCAGTCCTAGAATGGTCGAA....................................................................................................... 20 3 6 0.17 1 0 0 0 0 1 0
..........................................................................................................................................ACGGTCGCAGAGGTTC................................................................................................ 16 1 6 0.17 1 0 0 1 0 0 0
..........................................................................................................................................ATGGTCGCAGTGGTT................................................................................................. 15 1 7 0.14 1 0 1 0 0 0 0
...............................TGAGACCGAAGAAGTTATTA....................................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0
..................................................................................................................................................................................................AATGTCTTGAGTGGTTTGGT.................................... 20 3 8 0.13 1 0 0 0 0 0 1
...................................................................................................ATGGTGACTCGGTTTACCCG................................................................................................................................... 20 3 11 0.09 1 0 1 0 0 0 0
..........................................................................................................................................ACGGTCGCAGAGGTT................................................................................................. 15 1 12 0.08 1 0 1 0 0 0 0
.....................................CGAAGAAGTTATACTAGAGT................................................................................................................................................................................................. 20 3 13 0.08 1 1 0 0 0 0 0
.........................................................................................................ATTCGGTTTATCCGC.................................................................................................................................. 15 1 18 0.06 1 1 0 0 0 0 0
.......................TTCGTCGCAGAGCCCG................................................................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GCAGGACGTGTCAGTGT...... 17 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14739630-14739879 - dsi_25592 ATCATCCTCAT-GAGCGGCTATAAAAGCAGCGACTCTGGCTTCT-TCAATTTCATTTCATCATTACGATGCAAGCAGTTA---ACACGCGCCAGAAGACT------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTTTACCA---------------GC-G---------------------------------------------TCTCCAAGCGAC-AGCACCTTCTAACC--GGACGCACTTGC--------TCTCTATT-ACTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCGACCTGCACACTCACACACAGA
droSec2 scaffold_1:11548573-11548823 - ATCATCCTCAT-GAGCGGCTATAAAAGCAGCGACTCTGGCTTCT-TCAATTTCATTTCATCATTACGATGCAAGCAGTTA---ACACGCGCCAGAAGACT------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTTTACCA---------------GCAG---------------------------------------------TCTCCAAGCGAC-AGCACCTTCTAACC--GGCCGCACTTGC--------TCTCTATT-ACTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCGACCTGCACACTCACACACAGA
dm3 chr2R:14058775-14059025 - ATCATCCTTAT-GAGCGGCTATAAAAGCAAAGACTCTGACTTCT-TCAATTTCATTTCATCATTACGATGCAAGCAGTTA---ACACGCGCCAGAAGACG------AATGCACAACTAAGTCAAATGGGTGTAGGATAGGTCAGGATTTTACCA---------------GCAG---------------------------------------------TGTCCAAGCAGC-AGAACCTTCTAACC--CGACGCACTTGC--------TCTCTATT-ACCTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCGACCTGCACACTCACACACAGA
droEre2 scaffold_4845:8278452-8278700 - ATCATCCGCCT-GGGTTGCTATAAAAGCAGAGACTGTGGCTTCT-TCAGTTGTATTTCATAATTACGATGCAAGCAGTAA---ACACGCGCCACAGGACA------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTATCA-----------------GCAG---------------------------------------------TCTCCAAGCAGC-TTCAGCTCCTAACC--GGATACACTTGC--------TCTCTAAT-AATTCCAGAACACATTAAA----CATCAA------GCATCACCA------TCGACCTGCACAGTCACACATAGA
droYak3 2R:15127172-15127422 + ATCATCCTGCT-GGGCTGCTATAAAAGCAGAGGCGCTGGCTTCT-TCGGTTGTATTTCATCATTACGATGCAAACAGTAA---ACACGCGCCTAAGGACA------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTTAGGATTACCATA---------------GCAG---------------------------------------------TTTCCAAGCGGC-AGCATCTTCTAACC--AGATGCACTTGC--------TCTCCAAT-TCTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCCACCTGCACACTCACACACAGA
droEug1 scf7180000409672:3052339-3052587 - ATCATCCACAT-GGACTGCTATAAAAGTAGCGTCGCTGGCTTCT-TCAATTTCATTTCATCATCGCGATGCAAACAGTAA---AGACACGGCAAAAGACG------AAAGCGCAACTGAGCCAAATGGGCGTAGGCTAGGTCGGGATTGCAA-----------------CCAG---------------------------------------------TCTACAAGAG-T-TTCCCCATCTAACC--AGATGCACTTTC--------TTTCTAATTCTTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCAACCTGCATACTCACAAACAGA
droBia1 scf7180000301506:2832751-2832999 - ATCATCCTCGT-TGTCTGCTATAAAAGCGGCGTCGCTGGCTTCT-TCCATTTTATTTCACCACCGCGATGCAAGCAGCAA---ACACATGGCATAAGACG------AAAGCACAGCTCAGCCAAATGGGCGTAGGATAGGTCGGGATTGCCT-----------------CCAG---------------------------------------------TCTGCAAGCCAC-ACCACCTCCTAACC--GGATGCACTTGC--------TCTCTGAT-CCTTGCAGAACTCATCGAA----CACCAC------GCATCACCA------TCAACCTGCACACTCACACACAGA
droTak1 scf7180000416016:694835-695087 + ATCATCCTCGCGGGGCTGCTATAAAAGCAGCGTCGCTGGCTTCT-TCAATTTTATTTCACCACCGCAATGCAAGCAGCAA---ACACATGGCCTAAGACG------AAAGCACAACTCAGCCAAATGGGCGTAGGCTAGGTGGGAATTTCAG-----------------CCAG-TCGC-------------C--------------------------TCTCCAA--AAC-ACCACCTCCTAACC--GGATGCACTTGC--------TCTTCGAT-TCTTGCAGAACTCATCAAC----AACCAA------GCATCACCA------TCAACCTGCACACTCACACACAGA
droEle1 scf7180000491027:594645-594893 - ATCATCCTAGT-GGGCGGGTATAAAAGCAGCGTCGCTGGCTTCT-TCACCCTTATTCCATCATCGCGATGCAAGCAGTAA---ACACCCGGCAAAAGACG------AAGGCACAACTCAGCCAAATGGGCGTAGGATAGGTCGGGATTGGCT-----------------CCAG---------------------------------------------TCTCAAGGGGAT-TGCACCTTCTAACC--CGACGCACTTGT--------TCTCTGAT-CCTTGCAGAACTCACCAAA----CATCCA------GCATCACCA------TCAACCTGCACCATCACACACAGA
droRho1 scf7180000769565:26074-26321 + ATCATCCTTGT-GGGCGGTTATAAAAGCAGCGCCGCTAGCTTCT-TCATGCTTATTCTATCATCGCGATGCAAGCAGTGA---ACACCAGGCAAAAGACG------AAAGCACAACTCAGCCAAATGGGCGTAGGATAGGTCGGGATTGCCT-----------------CCAG---------------------------------------------TCTCCAGGAAAT-TCCACCTTCTAACC---GACGCACTTCC--------TCTCTAAT-CCTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCAACCTGCACACTCACACACAGA
droFic1 scf7180000453851:268665-268913 + ATCATCCAAAC-GGACGAGTATAAAAGCAGCGGCGCTGGCTTCT-TCAATTTTATTTCATCATCGCGATGCAAGCAGTTA---ACACGCGCCAAAAGACG------AAAGCACAACTTGGCCAAATGGGCGTAGGCTAGGTCGGGATTGACT-----------------TAAT---------------------------------------------TGTTTGGGTTAA-ACCACGTCCTAATC--GGATGCACTTGC--------TCTCTGAT-CCTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCAACCTGCACACTCACACACAGA
droKik1 scf7180000302471:298145-298412 + ATCATGCTCCG-GGTAGCCTATAAAAGCAGCTGCGGTGGCTTCT-TCGCTTTTATTCCATCATCGCGATGCAAGCAAACA---ACACACGACAGAAGACG------CAAGCACAACTCAGCCAAATGGGCGTAGGCTAGGTCGGGAATCTCAAA----------GTGCTCCAG-TCTA--------GTTCAGTGT-----GCAGAATTCT-------------------------GATCCTAACTCTAGA-TCCCTTTC--------CCTCTGAT-CATTGCAGAACTCACCAAAATATCATCAC------GCATCAACC------TGCACAACCACATACACACACAGA
droAna3 scaffold_13266:4475260-4475543 + ATCATTCAGCC-GGCCGGGTATAAAAGCAGCTTGGGTGGCTTCT-TCCATTTTATTTCATCACTGAGATGCAAGACAACAAGAACCTACGGCAGAAAACC------CAAGCACAACTCAGTCAGATGGGCATAGGATAGGTGGGGCAGTTATCCTTAAACCCTTGTGT-CC-TTGTACGGCTTCCTACTCCGGCT------AATCTCACT--------------------------CAT---CCG--GGCTGCACTTCT--------CTTCCTGT-AATTTCAGAATTCATCAAA----CATCAC------CCATCCGCATCTCTCTCAACCTGCACAATCTCACACAGA
droBip1 scf7180000395751:282837-283097 + ATCATGCTGTT-TGCCGGGTATAAAAGCACCTCCAGTGGCTTCT-TCAATTTTATTTCATCATTGAGATGCAAGGAAACAAGAACCCACGCCAGAAAACC------CAAGCACAACTCAGTCAGATGGGCATAGGATAGGTGGGGCCCTTGT-----------------CC-TTTTGCGACTTCCTAC-------------AATCTTACT--------------------------CAT---CCG--GGACGCACTTCT--------GTTCCTGT-AATTTCAGAATTCATCTAA----AGTCACCCATCCGCATCATTC------TCAACCTGCACAATCACACACAGA
dp5 3:7354617-7354875 - ATCAGCCCATGCGCTGGGGTATAAATGCAGGGGCCGTCGCTTCT-TTGCGTTTACTTCGCAATCGAGATGCAAGCAAGCT---GCACGCGTAACCAGACA------CTGCCTTTACTCAGCCAGATGGGCGTAGGATAGGTCAGGCTCGGGGT-----------------CGA-------------GCTCAGACT------AGTAATTCT--------------------------CATCTGACC--AGCCGCATGTGCATCTTCCACTTTTTCC-CATTGCAGAATCAATCAAA----CATCAC------GCATCAGCA------TCATCCCGCACTCACGCAGACACA
droPer2 scaffold_2:7555500-7555758 - ATCAGCCCATGAGCTGGGGTATAAATGCAGGGGCCGTCGCTTCC-TTGCGTTTACTTCGCAATCGAGATGCAAGCAAGCT---GCACGCGTAACCAGACA------CTGCCTTTACTCAGCCAGATGGGCGTAGGATAGGTCAGGCTCGGGGT-----------------CGA-------------GCTCAGACT------AGTAATTCT--------------------------CATCTGACC--AGCCGCATGTGCATCTTCCACTTTTTCC-CATTGCAGAATCAATCACA----CATCAC------GCATCAGCA------TCATCCCGCACTCACGCAGACACA
droWil2 scf2_1100000004822:2363951-2364151 + ATCATCCTTCT-------CTATATAAGCCG-----GTGATTTCG-TTTATT--CTTCAGTTATTGACATA-AAGCAATGA---CATCGACGCAACAGAAGCCCAAGAAAATAAATGAAAACCAAATGGCTGTAGGCTGAGAG-------------------------------------------------------------------------------------------ATCCATTTAATT--TCATCATCTTG-----------TACATT-TCTTCCAGAAGA-AGAAAA----CATCAC------GCA-------------CAACATCTTTAGTCACAC-CACA
droVir3 scaffold_12875:15842277-15842495 + -------------------TATAAAAGCGCAGCCGCTCGCGTAG-CTCCTCTTATTTCATCAGCGAAATGCAAACAGAGC---GCACATCGC------TC------CAAACTCGACTAAGGCAAATGGGCGTGGGATAGGTTAGGACGAAAAT-----------------AAA---------------------T------AACTGTTCATAGCTAAA--------TAGA-AATATTTACTAAAT--TGTTTTACTTTC--------TCGCTTGA-TCTTGCAGAACGTGCA--------------------------CA------CACACAGACACACACACATACACA
droMoj3 scaffold_6496:7945466-7945696 - -------------------TATAAAAGCGAAGCTTCTTACATTGTTTCCTCTCATTACCCAAGTGAAATGCAAACACAAC---CCACGTCGA-----------------ACTCAAC-ACGGCAAATGGGCGTGGGATAGGTTGGAATGACAAT-----------------AAA-------------ATAAAAAACACTATTAACAA------------TTTTG---TGGTAAACATTTACTAAAT--G-AAATTTATGT--------TCCGTTTT-GCTTGCAGAAATAACT----------TGC------ACGTACACA------TACACACACACATATACACACACA
droGri2 scaffold_15245:12646133-12646362 + ATCAGCA-------GCTATAATAAAAGCGGCGTTTCCCGCATTG-AGCATTTTATTTCATGAGTGAAATGAGAACTAA-----GC----GGACGTCGATC------AAAGCTCAGCTAAGACAAATTGGCGTGGGATAGGTTAGGTTTTAACTG-TAAAAT---A---------------------------------------TGCTCT----------------TGCCTAATATTTATTAA-----TATTCACACTC---TC---TCGTTCGC-TCCCGTAGA--------AA----CATACT------GCATGTTCA--------GACAGACACATACACACACAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCATCCTCAT-GAGCGGCTATAAAAGCAGCGACTCTGGCTTCT-TCAATTTCATTTCATCATTACGATGCAAGCAGTTA---ACACGCGCCAGAAGACT------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTTTACCA---------------GC-G---------------------------------------------TCTCCAAGCGAC-AGCACCTTCTAACC--GGACGCACTTGC--------TCTCTATT-ACTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCGACCTGCACACTCACACACAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................GCGCCAGAAGACT------AATGC...............................................................................................................................................................................................................................................1812.00200000000002000000
.......................................................................................................................................................................................................................................AGCACCTTCTAACC--GGAC...................................................................................................1812.00200200000000000000
........................................................................................................................................................................................................................................................................................GCAGAACTCACCAAA----CATCAA------GCATCACC...............................2912.00200200000000000000
............................................................................GTTA---ACACGCGCCAGAAGACT------....................................................................................................................................................................................................................................................2112.00210100000000000000
.....................................................................................................................................................................................................................................C-AGCACCTTCTAACC--GGAC...................................................................................................1912.00200200000000000000
......................................................................................................................................................................................................................................................................................TTGCAGAACTCACCAAA----CATCAA------GC.....................................2512.00200200000000000000
...................................................................ATGCAAGCAGTTA---ACACG......................................................................................................................................................................................................................................................................1812.00200000000002000000
...........................................................................................................................................................................................................................................................................TCTCTATT-ACTTGCAGAACTCACCAAA----CA.................................................2912.00200000000000002000
...........................................................TCATTACGATGCAAGCAGTTA---...........................................................................................................................................................................................................................................................................2111.00100000100000000000
.............................................................................................................................................................................................................................................................................................................................CCA------TCGACCTGCACACTCA........1911.00100000000000100000
.....................................................................................ACGCGCCAGAAGACT------AATG................................................................................................................................................................................................................................................1911.00100010000000000000
......................................................................CAAGCAGTTA---ACACGCGCCAGA...............................................................................................................................................................................................................................................................2211.00100000010000000000
...................................................................................................................................TAGGATAGGTCGGGATT..........................................................................................................................................................................................................1711.00100000000001000000
............................................................................................................................................................................................................................................................................CTCTATT-ACTTGCAGAACT..............................................................1911.00100100000000000000
.......................................................................................................................GCCAAATGGGCGTAGGATAGGTCGGGA............................................................................................................................................................................................................2711.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................CACCA------TCGACCTGCACACTC.........2011.00110000000000000000
...........................................................................................................................AATGGGCGTAGGATAGGTCGGGA............................................................................................................................................................................................................2311.00110000000000000000
...................................................................................................................................................................................................................................GAC-AGCACCTTCTAACC--GGACG..................................................................................................2211.00110000000000000000
..................................................................................................................................................................................................................................................ACC--GGACGCACTTGC--------TCTC...............................................................................1911.00110000000000000000
...................................................................................................................CTAAGCCAAATGGGCGTAGGA......................................................................................................................................................................................................................2111.00100000001000000000
....................................................................................................................................................................................................................................................................................ACTTGCAGAACTCACCAAA----CA.................................................2111.00100100000000000000
...................................................................................................................................................................................................................................GAC-AGCACCTTCTAACC--GGAC...................................................................................................2111.00100100000000000000
....................................................................................CACGCGCCAGAAGACT------AATG................................................................................................................................................................................................................................................2011.00110000000000000000
...........................................................................................CAGAAGACT------AATGCACAAC..........................................................................................................................................................................................................................................1911.00100000000100000000
............................................................................................................................................................................................................................................................................................................................ACCA------TCGACCTGCACACTCACACACA..2611.00100100000000000000
..............................................................................................................CACAACTAAGCCAAATGGGC............................................................................................................................................................................................................................2011.00100100000000000000
.......................................................TTCATCATTACGATA........................................................................................................................................................................................................................................................................................15110.09100000001000000000
droSec2
ATCATCCTCAT-GAGCGGCTATAAAAGCAGCGACTCTGGCTTCT-TCAATTTCATTTCATCATTACGATGCAAGCAGTTA---ACACGCGCCAGAAGACT------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTTTACCA---------------GCAG---------------------------------------------TCTCCAAGCGAC-AGCACCTTCTAACC--GGCCGCACTTGC--------TCTCTATT-ACTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCGACCTGCACACTCACACACAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................CCAAATGGGCGTAGGATAGGTCGGG.............................................................................................................................................................................................................2511.0010010
..........................................................ATCATTACGATGCAAGCAGT................................................................................................................................................................................................................................................................................2011.0010100
....................................................................................CACGCGCCAGAAGACT------AATGCACAACTA........................................................................................................................................................................................................................................2811.0011000
..............................................................................TA---ACACGCGCCAGAAGACT------AATG................................................................................................................................................................................................................................................2311.0010100
..................................................................................................CT------AATGCACAACTAAGCCAAATG...............................................................................................................................................................................................................................2311.0010001
dm3
ATCATCCTTAT-GAGCGGCTATAAAAGCAAAGACTCTGACTTCT-TCAATTTCATTTCATCATTACGATGCAAGCAGTTA---ACACGCGCCAGAAGACG------AATGCACAACTAAGTCAAATGGGTGTAGGATAGGTCAGGATTTTACCA---------------GCAG---------------------------------------------TGTCCAAGCAGC-AGAACCTTCTAACC--CGACGCACTTGC--------TCTCTATT-ACCTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCGACCTGCACACTCACACACAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..............................................................................................................................................................................................................................................................................................................CAA------GCATCACCA------TCGACCTGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CACAACTAAGTCAAATGGGTGTAGG.......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................ATTTTACCA---------------GCAG---------------------------------------------TGTCCAAGC...........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................................CATCAA------GCATCACCA------TCGACC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ATCATTACGATGCAAGCA..................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................GATAGGTCAGGATTTTACCA---------------GCA..................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................TTACGATGCAAGCAGTTA---ACACGC.....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................TAGGTCAGGATTTTACCA---------------GCA..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AACTAAGTCAAATGGGTG...........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GGTGTAGGATAGGTCAGGATTTTACC.....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................GACG------AATGCACAACTAAGTC....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CATCAA------GCATCACCA------TCGAC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................C-AGAACCTTCTAACC--CGACGCACTTGC--------...................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................ATTTTACCA---------------GCAG---------------------------------------------TGTCCA..............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ATGCAAGCAGTTA---ACACGCGCCAGA...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATCAA------GCATCACCA------TCGACCTG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................ATGCAAGCAGTTA---ACACC......................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GCAGC-AGAACCTTCTAACC--CGACGC.................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CCAGAAGACG------AATGCACAACTAAGTC....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................GTCAAATGGGTGTAGGATAGGTA................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTTA---ACACGCGCCAGAAGACG------AATG................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................CACTTGC--------TCTCTATT-ACCTGC....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CTTGC--------TCTCTATT-ACCTGCAGA.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................CACAACTAAGTCAAATGGGTGTAGGAT.....................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...............................................................................A---ACACGCGCCAGAAGACG------AATGCACAAC..........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................GCGCCAGAAGACG------AATGCACAACTAAG......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................................ACGATGCAAGCAGTTA---ACACGCGC...................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............................................................TACGATGCAAGCAGTTA---ACACG......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................TTCTAACC--CGACGCACTTG............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACTCACCAAA----CATCAA------GCATCACCA------........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................TTA---ACACGCGCCAGAAGACG------AA..................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGCAAGCAGTTA---ACACGCGT...................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CCAGAAGACG------AATGCACAACTA........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CAACTAAGTCAAATGGGTGT..........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CATCACCA------TCGACCTGCACACTC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCATCATTACGATGCAAGCAGTTA---ACACGC.....................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGAACTCACCAAA----CATCAA------GCATCACCA------........................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTAACC--CGACGCACTTGC--------TCTCTAT............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TA---ACACGCGCCAGAAGACG------AATGCACA............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................A------GCATCACCA------TCGACCTGCACACTCACC......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GATTTTACCA---------------GCAG---------------------------------------------TGTC................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................................GTCAAATGGGTGTAGGATAGGT.................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................GCACAACTAAGTCAAATGGGT............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........T-GAGCGGCTATAAAAGCAAAGACTCTGAC......................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................GCGCCAGAAGACG------AATGCAC.............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................CATCAA------GCATCACCA------TCGACCTGCACAC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................GATGCAAGCAGTTA---ACACG......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................A------GCATCACCA------TCGACCTGCACACTCACA......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CATTTCATCATTACGATGC.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GCAGTTA---ACACGCGCCAGAAGACG------AA..................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................AAGTCAAATGGGTGTAGGA......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................ACACGCGCCAGAAGACG------AATGC...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CACGCGCCAGAAGACG------AATGCACAA...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................AGGATAGGTCAGGATTTTACCA---------------G....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................................................................................................................................................TACCA---------------GCAG---------------------------------------------TGTCCAAGCAGC-.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GTCAAATGGGTGTAGGATA....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...................................................................ATGCAAGCAGTTA---ACACGCGCCAG................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CGCCAGAAGACG------AATGCACAACTAAGTC....................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................TCATCATTACGATGCAAGCAGT................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................GTCAGGATTTTACCA---------------GCAG---------------------------------------------....................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TGGGTGTAGGATAGGTCAGGAT...........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AAATGGGTGTAGGATAGGTC................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................A------TCGACCTGCACACTCACACA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GTAGGATAGGTCAGGATTTTA.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGAAGACG------AATGCACAACT.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................TTA---ACACGCGCCAGAAGACG------A...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................TGCAAGCAGTTA---ACACGC.....................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................ATTACGATGCAAGCAGTTA---AC.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACGCACTTGC--------TCTCTATT-ACC.......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................GCCAGAAGACG------AATGCACAAC..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droEre2
ATCATCCGCCT-GGGTTGCTATAAAAGCAGAGACTGTGGCTTCT-TCAGTTGTATTTCATAATTACGATGCAAGCAGTAA---ACACGCGCCACAGGACA------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTCGGGATTATCA-----------------GCAG---------------------------------------------TCTCCAAGCAGC-TTCAGCTCCTAACC--GGATACACTTGC--------TCTCTAAT-AATTCCAGAACACATTAAA----CATCAA------GCATCACCA------TCGACCTGCACAGTCACACATAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................ATGCAAGCAGTAA---ACACG......................................................................................................................................................................................................................................................................1813.0030000030
......................................................................................................................AGCCAAATGGGCGTAGGATAG...................................................................................................................................................................................................................2111.0011000000
.....................................................................GCAAGCAGTAA---ACACGCG....................................................................................................................................................................................................................................................................1811.0011000000
.................................................................CGATGCAAGCAGTAA---ACA........................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................CACCA------TCGACCTGCACAG...........1811.0010000100
droYak3
ATCATCCTGCT-GGGCTGCTATAAAAGCAGAGGCGCTGGCTTCT-TCGGTTGTATTTCATCATTACGATGCAAACAGTAA---ACACGCGCCTAAGGACA------AATGCACAACTAAGCCAAATGGGCGTAGGATAGGTTAGGATTACCATA---------------GCAG---------------------------------------------TTTCCAAGCGGC-AGCATCTTCTAACC--AGATGCACTTGC--------TCTCCAAT-TCTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCCACCTGCACACTCACACACAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................AA---ACACGCGCCTAAGGACA------AATGC...............................................................................................................................................................................................................................................2412.00200000110000
..................................................................................................CA------AATGCACAACTAAGCCAAATGGGC............................................................................................................................................................................................................................2611.00101000000000
...............................................................................................................................GGCGTAGGATAGGTTAGGATTACC.......................................................................................................................................................................................................2411.00110000000000
..................................................................GATGCAAACAGTAA---ACACGC.....................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................A---ACACGCGCCTAAGGACA------AA..................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................GGACA------AATGCACAACTAAGCCA...................................................................................................................................................................................................................................2211.00101000000000
.........................................................................................................................................................................................................................................................................................................................ATCACCA------TCCACCTGCACACC..........2111.00100100000000
..............................................................................AA---ACACGCGCCTAAGGACA------....................................................................................................................................................................................................................................................1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................CACCA------TCCACCTGCACACT..........1911.00101000000000
..............................................................................................................CACAACTAAGCCAAATGGGCG...........................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................AAATGGGCGTAGGATAGAAC................................................................................................................................................................................................................2030.33100000100000
droEug1
ATCATCCACAT-GGACTGCTATAAAAGTAGCGTCGCTGGCTTCT-TCAATTTCATTTCATCATCGCGATGCAAACAGTAA---AGACACGGCAAAAGACG------AAAGCGCAACTGAGCCAAATGGGCGTAGGCTAGGTCGGGATTGCAA-----------------CCAG---------------------------------------------TCTACAAGAG-T-TTCCCCATCTAACC--AGATGCACTTTC--------TTTCTAATTCTTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCAACCTGCATACTCACAAACAGASizeHit CountTotal NormTotal
No Reads
droBia1
ATCATCCTCGT-TGTCTGCTATAAAAGCGGCGTCGCTGGCTTCT-TCCATTTTATTTCACCACCGCGATGCAAGCAGCAA---ACACATGGCATAAGACG------AAAGCACAGCTCAGCCAAATGGGCGTAGGATAGGTCGGGATTGCCT-----------------CCAG---------------------------------------------TCTGCAAGCCAC-ACCACCTCCTAACC--GGATGCACTTGC--------TCTCTGAT-CCTTGCAGAACTCATCGAA----CACCAC------GCATCACCA------TCAACCTGCACACTCACACACAGASizeHit CountTotal NormTotal
No Reads
droTak1
ATCATCCTCGCGGGGCTGCTATAAAAGCAGCGTCGCTGGCTTCT-TCAATTTTATTTCACCACCGCAATGCAAGCAGCAA---ACACATGGCCTAAGACG------AAAGCACAACTCAGCCAAATGGGCGTAGGCTAGGTGGGAATTTCAG-----------------CCAG-TCGC-------------C--------------------------TCTCCAA--AAC-ACCACCTCCTAACC--GGATGCACTTGC--------TCTTCGAT-TCTTGCAGAACTCATCAAC----AACCAA------GCATCACCA------TCAACCTGCACACTCACACACAGASizeHit CountTotal NormTotal
No Reads
droEle1
ATCATCCTAGT-GGGCGGGTATAAAAGCAGCGTCGCTGGCTTCT-TCACCCTTATTCCATCATCGCGATGCAAGCAGTAA---ACACCCGGCAAAAGACG------AAGGCACAACTCAGCCAAATGGGCGTAGGATAGGTCGGGATTGGCT-----------------CCAG---------------------------------------------TCTCAAGGGGAT-TGCACCTTCTAACC--CGACGCACTTGT--------TCTCTGAT-CCTTGCAGAACTCACCAAA----CATCCA------GCATCACCA------TCAACCTGCACCATCACACACAGASizeHit CountTotal NormTotal
No Reads
droRho1
ATCATCCTTGT-GGGCGGTTATAAAAGCAGCGCCGCTAGCTTCT-TCATGCTTATTCTATCATCGCGATGCAAGCAGTGA---ACACCAGGCAAAAGACG------AAAGCACAACTCAGCCAAATGGGCGTAGGATAGGTCGGGATTGCCT-----------------CCAG---------------------------------------------TCTCCAGGAAAT-TCCACCTTCTAACC---GACGCACTTCC--------TCTCTAAT-CCTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCAACCTGCACACTCACACACAGASizeHit CountTotal NormTotal
No Reads
droFic1
ATCATCCAAAC-GGACGAGTATAAAAGCAGCGGCGCTGGCTTCT-TCAATTTTATTTCATCATCGCGATGCAAGCAGTTA---ACACGCGCCAAAAGACG------AAAGCACAACTTGGCCAAATGGGCGTAGGCTAGGTCGGGATTGACT-----------------TAAT---------------------------------------------TGTTTGGGTTAA-ACCACGTCCTAATC--GGATGCACTTGC--------TCTCTGAT-CCTTGCAGAACTCACCAAA----CATCAA------GCATCACCA------TCAACCTGCACACTCACACACAGASizeHit CountTotal NormTotal
No Reads
droKik1
ATCATGCTCCG-GGTAGCCTATAAAAGCAGCTGCGGTGGCTTCT-TCGCTTTTATTCCATCATCGCGATGCAAGCAAACA---ACACACGACAGAAGACG------CAAGCACAACTCAGCCAAATGGGCGTAGGCTAGGTCGGGAATCTCAAA----------GTGCTCCAG-TCTA--------GTTCAGTGT-----GCAGAATTCT-------------------------GATCCTAACTCTAGA-TCCCTTTC--------CCTCTGAT-CATTGCAGAACTCACCAAAATATCATCAC------GCATCAACC------TGCACAACCACATACACACACAGASizeHit CountTotal NormTotal
No Reads
droAna3
ATCATTCAGCC-GGCCGGGTATAAAAGCAGCTTGGGTGGCTTCT-TCCATTTTATTTCATCACTGAGATGCAAGACAACAAGAACCTACGGCAGAAAACC------CAAGCACAACTCAGTCAGATGGGCATAGGATAGGTGGGGCAGTTATCCTTAAACCCTTGTGT-CC-TTGTACGGCTTCCTACTCCGGCT------AATCTCACT--------------------------CAT---CCG--GGCTGCACTTCT--------CTTCCTGT-AATTTCAGAATTCATCAAA----CATCAC------CCATCCGCATCTCTCTCAACCTGCACAATCTCACACAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................AT---CCG--GGCTGCACTTCT--------CTTCCT.............................................................................2311.001100000
..................................................................................................................ACTCAGTCAGATGGGCATAGGATAG...................................................................................................................................................................................................................2511.001000001
..............................................................................................................................................................ACCCTTGTGT-CC-TTGTACGGCT........................................................................................................................................................................2211.001000001
......................................................................................................................AGTCAGATGGGCATAGGATAG...................................................................................................................................................................................................................2111.001000001
................................................................................AGAACCTACGGCAGAAAACC------CAAGCACA............................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................................ATCAAA----CATCAC------CCATCCGCATCTCTCT.......................2811.001010000
droBip1
ATCATGCTGTT-TGCCGGGTATAAAAGCACCTCCAGTGGCTTCT-TCAATTTTATTTCATCATTGAGATGCAAGGAAACAAGAACCCACGCCAGAAAACC------CAAGCACAACTCAGTCAGATGGGCATAGGATAGGTGGGGCCCTTGT-----------------CC-TTTTGCGACTTCCTAC-------------AATCTTACT--------------------------CAT---CCG--GGACGCACTTCT--------GTTCCTGT-AATTTCAGAATTCATCTAA----AGTCACCCATCCGCATCATTC------TCAACCTGCACAATCACACACAGASizeHit CountTotal NormTotal
No Reads
dp5
ATCAGCCCATGCGCTGGGGTATAAATGCAGGGGCCGTCGCTTCT-TTGCGTTTACTTCGCAATCGAGATGCAAGCAAGCT---GCACGCGTAACCAGACA------CTGCCTTTACTCAGCCAGATGGGCGTAGGATAGGTCAGGCTCGGGGT-----------------CGA-------------GCTCAGACT------AGTAATTCT--------------------------CATCTGACC--AGCCGCATGTGCATCTTCCACTTTTTCC-CATTGCAGAATCAATCAAA----CATCAC------GCATCAGCA------TCATCCCGCACTCACGCAGACACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................AC------GCATCAGCA------TCATCCCG................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................CATCAGCA------TCATCCCGCACTCACGCA......2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................................CATCCCGCACTCACGCAGACA..2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................GCA------TCATCCCGCACTCACGCA......2111.0010100000000
..................................................................GATGCAAGCAAGCT---GCACG......................................................................................................................................................................................................................................................................1911.0010010000000
........................................................................AGCAAGCT---GCACGCGTAACCA..............................................................................................................................................................................................................................................................2111.0010000001000
............................................................................................................................................................................................................................................................................................................................AGCA------TCATCCCGCACTCACG........2011.0010100000000
..................................................................................................................ACTCAGCCAGATGGGCGTAGGATA....................................................................................................................................................................................................................2411.0010000001000
.............................................................................................................................................................................................................................................................................................................................GCA------TCATCCCGCACTCACGC.......2011.0010100000000
............................................................................AGCT---GCACGCGTAACCAGACA------CTG.................................................................................................................................................................................................................................................2411.0010100000000
.............................................................ATCGAGATGCAAGCAAGCT---G..........................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................AGCT---GCACGCGTAACCAGA............................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................CATCAC------GCATCAGCA------TCATC...................2011.0010100000000
............................................................................................................................................................................................................AATTCT--------------------------CATCTGACC--AGCCGC.................................................................................................2111.0010100000000
.........................................................................................................................................AGGTCAGGCTCGGGGT-----------------CGA-------------GCTCAGA.............................................................................................................................................................2611.0010100000000
..........................................................................CAAGCT---GCACGCGTAACCAGA............................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................C------GCATCAGCA------TCATCCCGCACTC...........2311.0010010000000
droPer2
ATCAGCCCATGAGCTGGGGTATAAATGCAGGGGCCGTCGCTTCC-TTGCGTTTACTTCGCAATCGAGATGCAAGCAAGCT---GCACGCGTAACCAGACA------CTGCCTTTACTCAGCCAGATGGGCGTAGGATAGGTCAGGCTCGGGGT-----------------CGA-------------GCTCAGACT------AGTAATTCT--------------------------CATCTGACC--AGCCGCATGTGCATCTTCCACTTTTTCC-CATTGCAGAATCAATCACA----CATCAC------GCATCAGCA------TCATCCCGCACTCACGCAGACACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................GCT---GCACGCGTAACCAGA............................................................................................................................................................................................................................................................1811.001000100
..........................................................................................................................................................................................................GTAATTCT--------------------------CATCTGACC--AGC....................................................................................................2011.001100000
..............................................................................................................................GGGCGTAGGATAGGTCAG..............................................................................................................................................................................................................1811.001000010
droWil2
ATCATCCTTCT-------CTATATAAGCCG-----GTGATTTCG-TTTATT--CTTCAGTTATTGACATA-AAGCAATGA---CATCGACGCAACAGAAGCCCAAGAAAATAAATGAAAACCAAATGGCTGTAGGCTGAGAG-------------------------------------------------------------------------------------------ATCCATTTAATT--TCATCATCTTG-----------TACATT-TCTTCCAGAAGA-AGAAAA----CATCAC------GCA-------------CAACATCTTTAGTCACAC-CACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................AATGAAAACCAAATGGCTGTAGG.......................................................................................................................................................................................................................2311.00110000
.....................................................................................................................AAACCAAATGGCTGTAGGCTGAG..................................................................................................................................................................................................................2311.00100010
....................................................................................ATCGACGCAACAGAAGCCC.......................................................................................................................................................................................................................................................1911.00100001
droVir3
-------------------TATAAAAGCGCAGCCGCTCGCGTAG-CTCCTCTTATTTCATCAGCGAAATGCAAACAGAGC---GCACATCGC------TC------CAAACTCGACTAAGGCAAATGGGCGTGGGATAGGTTAGGACGAAAAT-----------------AAA---------------------T------AACTGTTCATAGCTAAA--------TAGA-AATATTTACTAAAT--TGTTTTACTTTC--------TCGCTTGA-TCTTGCAGAACGTGCA--------------------------CA------CACACAGACACACACACATACACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................AGC---GCACATCGC------TC------CAAACTCGACT.........................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000002
.............................................................AGCGAAATGCAAACAGAGC---G..........................................................................................................................................................................................................................................................................2012.002000000000000000000000100000000000000000000000000000000000000100
..................................................................................................TC------CAAACTCGACTAAGGCA...................................................................................................................................................................................................................................1912.002000000200000000000000000000000000000000000000000000000000000000
.............................................................AGCGAAATGCAAACAGAGC---GCACA......................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
............................................................CAGCGAAATGCAAACAGAG...............................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................GCGTGGGATAGGTTAGGACGAA........................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..................................................................AATGCAAACAGAGC---GCACA......................................................................................................................................................................................................................................................................1911.001000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................TCGACTAAGGCAAATGGGCG...........................................................................................................................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
....................................................................TGCAAACAGAGC---GCACATCGC------TC------....................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................GC---GCACATCGC------TC------CAAACTCGACTAAGGC....................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................CGAAATGCAAACAGAGC---G..........................................................................................................................................................................................................................................................................1811.001000010000000000000000000000000000000000000000000000000000000000
..................................................................AATGCAAACAGAGC---GCACATC....................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..........................................................ATCAGCGAAATGCAAACAGA................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
..............................................................GCGAAATGCAAACAGAGC---G..........................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AAGGCAAATGGGCGTGGGATAG...................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................CGC------TC------CAAACTCGACTAAGGC....................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGAACGTGCA--------------------------CA------CACACAGACACA............2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CTCGACTAAGGCAAATGGG.............................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
...............................................................CGAAATGCAAACAGAGC---GCA........................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
...................................................................ATGCAAACAGAGC---GCACATCGC------............................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................GGCAAATGGGCGTGGGATAGA..................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................AGACACACACACATACACA19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
-------------------TATAAAAGCGAAGCTTCTTACATTGTTTCCTCTCATTACCCAAGTGAAATGCAAACACAAC---CCACGTCGA-----------------ACTCAAC-ACGGCAAATGGGCGTGGGATAGGTTGGAATGACAAT-----------------AAA-------------ATAAAAAACACTATTAACAA------------TTTTG---TGGTAAACATTTACTAAAT--G-AAATTTATGT--------TCCGTTTT-GCTTGCAGAAATAACT----------TGC------ACGTACACA------TACACACACACATATACACACACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................ACTCAAC-ACGGCAAATGG..............................................................................................................................................................................................................................1811.001100000
..................................................................................................................AC-ACGGCAAATGGGCGTG.........................................................................................................................................................................................................................1811.001100000
..................................................................AATGCAAACACAAC---CCACGTCGA-----------------ACTCAA...........................................................................................................................................................................................................................................2911.001000001
droGri2
ATCAGCA-------GCTATAATAAAAGCGGCGTTTCCCGCATTG-AGCATTTTATTTCATGAGTGAAATGAGAACTAA-----GC----GGACGTCGATC------AAAGCTCAGCTAAGACAAATTGGCGTGGGATAGGTTAGGTTTTAACTG-TAAAAT---A---------------------------------------TGCTCT----------------TGCCTAATATTTATTAA-----TATTCACACTC---TC---TCGTTCGC-TCCCGTAGA--------AA----CATACT------GCATGTTCA--------GACAGACACATACACACACAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................CTAA-----GC----GGACGTCGATC------AA..................................................................................................................................................................................................................................................1920.50110

Generated: 05/19/2015 at 05:28 AM