ID:

dsi_25584

 Coordinate:

3l:1511843-1511992 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.7 -35.7 -35.6

Flybase annnotation

CDS [3l_1511174_1511842_-]; exon [3l_1510877_1511842_-]; intron [3l_1511843_1512389_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCAGTAGCGCAAGCTACACGCACACAGCACTACAGCCCCGCCCCCGCTATGCCCGTCCAACTGATCTGGGCTTGGGCAAGCGATTTGTACATTAGTTTAGTTGCTCACTCTGTGATTGGGATGAAGAAGTTTCTAGTGAGCGCACTGGGACTGGAGCCATTAATCAGCCACTAATATTATGCCCTTTGTATCTTTGCAGTCGCGGAGAATGCTTAGCCTGGATCAATCCATGTTGAACGACGATGACGA
**************************************************((((((((((.......)))))..))))).((((((......((((((((((((((((((....((((..........))))...)))))))).))).))))))).......)))).)).................(((((....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
.................................................................................................................TGATGGGGATGACGAAGTTT..................................................................................................................... 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACTGGATCAATGCATGTTG.............. 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGTCGCGGAGAATGCTTAGCCTGGAT.......................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................TAGTGAGCGCACTGGGACT................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCGGAGAATGCTTAGCCTGGATCAATC..................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................CACGCACACAGCACTACAGCC.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................ATTATGCGCTTAGTGTCTTTGC.................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................ACACAGCACTACAGCCCCGC................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................TTTAGTTGCGCACTCT.......................................................................................................................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................CCGGATCAAGCAATGTTGAA............ 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................TCTGTGCATGGGATGAAGAG......................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................GCGCACTGGGTCTGGA.............................................................................................. 16 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................................................ATTTAGTTGGTCACTCTGTGG...................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................ATGAGCGCACTGGAACTG................................................................................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0
...........................GCACTACCGTCCCGTCCC............................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0
....................................................................GGGCTTCGGCAAGTGA...................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TAGTCATCGCGTTCGATGTGCGTGTGTCGTGATGTCGGGGCGGGGGCGATACGGGCAGGTTGACTAGACCCGAACCCGTTCGCTAAACATGTAATCAAATCAACGAGTGAGACACTAACCCTACTTCTTCAAAGATCACTCGCGTGACCCTGACCTCGGTAATTAGTCGGTGATTATAATACGGGAAACATAGAAACGTCAGCGCCTCTTACGAATCGGACCTAGTTAGGTACAACTTGCTGCTACTGCT
**************************************************((((((((((.......)))))..))))).((((((......((((((((((((((((((....((((..........))))...)))))))).))).))))))).......)))).)).................(((((....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
......................................................................................................................................ACCACTCGCGCGACCCTGA................................................................................................. 19 2 2 1.50 3 2 1 0 0 0 0
..................................................................................................................TCAACCCTACTTCGTCAAAGAT.................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................AGGTACAACTTGCTGCTACTG.. 21 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................ACCACTCGCGCGACCCTGAGCT.............................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................ACCACTCGCGCGACCCTG.................................................................................................. 18 2 4 0.50 2 2 0 0 0 0 0
........................TGACTTGATGTCGGGG.................................................................................................................................................................................................................. 16 2 20 0.50 10 10 0 0 0 0 0
......................................................................................................................................ACCACTTGCGTGACCCTG.................................................................................................. 18 2 3 0.33 1 1 0 0 0 0 0
............................................................TGACTAGACCGGAACCCGG........................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0
...........................................................................................................................................................................................................................AGCTAGTTAGGTAAAACTT............ 19 2 4 0.25 1 0 0 1 0 0 0
......................................................................................................................................ACCACTCGCGCGATCCTGA................................................................................................. 19 3 6 0.17 1 1 0 0 0 0 0
......................................GGCGGGGGCGATCCCGGTAG................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 1 0
...............................................................................................................................................................................ATAATACGGGAAACAGAGAGC...................................................... 21 3 19 0.05 1 0 0 0 0 0 1
......................................................................................................................................ACCACTCGCGTGATCC.................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................ACCACTCGCGCTACCCTGA................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:1511793-1512042 - dsi_25584 ATCAGTAGC-----------------GCAAGCTACACGCA--------------------------------------------CACAGCACTACAGCCC----CG---------CCCCCGCTA--------------------------------------------------------------------------------------------------------------------------------------------------TGCCCGTCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--AC-----TGGGAC-------TG----GAGCCATT--------AATCAGCCA---C---T-AAT-ATTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GA
droSec2 scaffold_2:1628142-1628397 - ATCAGTAGC-----------------GCAAGCTACACGCA--------------------------------------------CACAGCACTACAGCCC----CGCCC---CCGCCCCCGCTA--------------------------------------------------------------------------------------------------------------------------------------------------TCCCCGTCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--AC-----TGGGAC-------TG----GGGCCATT--------TATCAGCCA---C---T-AAT-ATTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GA
dm3 chr3L:1601884-1602133 - ATCAGTAGC-----------------GCAGGCTACACGCA--------------------------------------------CACAACACTACAGTCC----CG---------CCCCCGCTA--------------------------------------------------------------------------------------------------------------------------------------------------CGCCCGACCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTCTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--AC-----TGGGAC-------TG----GAGTCATT--------CATCAGCCA---C---T-AAT-GTTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GA
droEre2 scaffold_4784:1581342-1581609 - ATCAGTAGC-----------------GCAAGCTACACGCA--------------------------------------------CACAGCACTACAGCCC----CG---------CCCCCACT--------------------------------------------------------------------------------------------------------------------------------GCTGCTGCCACCCCCGCGTCAGTCACCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCAC--AC-----TGGAAC-------TG----AAGCCATG--------ATTCAGGCA---C---T-AAT-GTCATGTCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTA---AACG---AAGAT---GAC---------GA
droYak3 3L:1552932-1553199 - ATCAGTAGC-----------------GCAAGCTTCACGCA--------------------------------------------CACAGCACTACTGCCC----CG---------CCCCCACT--------------------------------------------------------------------------------------------------------------------------------GCCGCTGCCGCCCCCGCTTCAGCCACCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--GC-----TGGGAC-------TG----GAGCCACG--------AATCAGCCA---C---T-AAT-GCTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---AAC---------GA
droEug1 scf7180000409007:420258-420527 - ATCAGCAGC-----------------GCAGGCTACACGCA--------------------------------------------CACA-CACT-CG--------------------------------------AA-------------------------------------------------------------------------------------------TACGTATGTGCCACCGCCCCCACAAC--------CCCTCGCTTCACCCGTCCAACTGAACTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTTACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTC--AT-----TGAGAT-------TG----GGGCAGTA--------AATCATCGA---A---T-AAC-CAAATGTCC-T----------------TTG-------TATCTTTGTAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GA
droBia1 scf7180000300910:1720138-1720444 - ATCAGCAGC-----------------GCAGGCTACACACA--------------------------------------------CGCAA----------------------------------------------ACACGCACACACACCGCCCCCTCACCCAGCACCACCCCCACCCCTTTCCGCCCGC-----CCCCCTCTCCTCCCCTCCCC-CG--------------------------------------------------------CTCCCGACTGAACTGGGCTTG------------GGCGAGCGATTTGTACATTATAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTCACGC-----TGGGAT-------TG----GAGCAATA--------AATCAGGGAA--A---T-AA---------CC-T----------------TTGTCTCTC-TTTATTTGCAGTCACGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACGATGACGAT---GAC---------GA
droTak1 scf7180000415095:180516-180779 + ATCAGCAGC-----------------GCAGGCTACACAT------------------------------------------------------ACCGCCCC-CTCG---------CCCCGGCCACGCCCCCCTCCCCACA---------------------------------------------------------------------------------------C--A-------------------------------------------CA-----TAGAACTCAGCTTG------------GGCGAGCGATTTGTACATTATAGTTTAGTTGCTCACTCTGCGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTCACGC-----TGGGTT------TTC----AAGCACTA--------AATCATTGAA--A---T-AAC-CGTGTGCCC-T----------------TTGTTT----GTTTCTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AATGACGACGAT---GAT---------GA
droEle1 scf7180000491249:3982970-3983225 + ATCAGCAGC-----------------GCAGGTTACATATA--------------------------------------------TATA-CACT-CAC--------TCCC---C--TCCCCCTT-----------------------------------------------------------------------------------------------------------------------------------------------------GCCATCCAACTGGGCTGGGCTTG------------GGCAAGCAATTTGTACAT--TAGTTTAG-TGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTTTAGTGAGCTCTCGC-----TGGGAT-------TC----GTACAGTA--------AATCATTGAA--T---T-AAC-CACATATCT-C----------------TTGTCTCTTCCA-TTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAGTCCATGTTG---AACGAAGACGAT---GAC---------GA
droRho1 scf7180000776850:350225-350485 + ATCAGCAGC-----------------GCAGGTTACATATA--------------------------------------------TAAA-CACC-----CT----CTCCC---CTTCA----------------------------------------------------------------------------------------------------------------------------------------------CCCCCTCGTTTCCCCCGCCCAACTGGGCTGGGCTTG------------GGCGAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTC--GC-----TGGGAT-------TC----CGACAATA--------AATCATCAA---A---T-AAC-CGCATGCCT-T-----------TTGTCTTG----TC-TCTTTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAGTCCATGTTG---AACG---ACGAT---GAC---------GA
droFic1 scf7180000454113:481338-481563 + ATCAGCAGC-----------------GC------------------------------------------------------------------------------CCT------------CT-------------------------------------------------------------------------------------------------------------------------------------------------TTCCCCCGTCCAACTGAACTGGGCTTG------------GGCGAACGATTTGTACAT--TAGTTTAGTTGCTCACTTTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTC--TC-----TAGTT-------ACA----AGGCATAA--------TATAATATTA--A---C-AAC-TGTATACCT-T-----------CTCTTTCG----TT-CTTTCTTGCAGTCGCGGAGAAT------GCT---TAGCTTGGATCAATCCATGTTG---AACG---ACGAT---AAC---------GA
droKik1 scf7180000302577:73980-74272 - GC-AGCGGCAGAGGCAGAGACGACGGGCAGGTTAC---CA--------------------------------------------CACAGCACTGAGAACT----CTCCT---CCTCCCCCGCTA-GCTCGGC--------------------------------------------------------------------------------------------------------------------------------------------TCCATACAAGTGGCTTGTGCTTG------------GGCGAACGATTTGTACAT--TAGTTTAGTTGTTCACTCTGCGAGTG----------------------------------GGATTGCGCGTCAGATGAAGAAGTTTCTAGTGAGCTC--CC-----GG--ATCCATCGGAT----GGGCAA----------AA---GGCACCCATAACTAAC---CATGTCC-T-----------------TGTT---T-TCTCTCTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCACTCCACGTTG---AACG---ATGAC---GAT---------GA
droAna3 scaffold_13337:12475452-12475778 - ATCAGCAGC--------------------AGTTAC-----------------------------------------------CACAT------ACTGCCCGCTTCG---------GCCCGGCCCGGTCC---------GGCCCGCACTTCGCC----------------------------------CGCTGACACCCACTCACCTCCCGCCCATCCGTCCGTCACATACATACGTC---------------------------------CGTCCGTCCAGCTGAACTCAGCTTG------------GGCGAGCGATTTGTACAT--TAGTTTAGTTGTTCACTCAGTGATTG----------------------------------GGATTGTTTGCTCGATGAAGAAGTTTTTAGTGAGCTC--GC-----TGGCAC-------TG----GAAT------ACGGCGAATAGC------CTAAT-AAC-C-CATGTTT-T----------------CTC--T--A-TCTCATTATAGTCGCGGAGAAT------GCT---TAGCCTGGATCACTCCACGTTC---AACG---ACGAT---GAC---------GA
droBip1 scf7180000396589:1511506-1511820 + ATCAGCAGC--------------------AGTTAC-----------------------------------------------CACAT------ACTGCCCGCTTCG---------GCCCGACCC--------------GGCCCGCACTTCGCC------------------------------------CTGACACCCACTCAGCTCCCGCCCCTCCGACCG-----TACGTCCGTC---------------------------------CGTCCGTCCAGCTGAACTCAGCTTG------------GGCGAGCGATTTGTACAT--TAGTTTGGTTGTTCACTCAGTGATTG----------------------------------GGATTGTTTGCTCGATGAAGAAGTTTTTAGTGAGCTC--GC-----TGGCAT-------TA----GAAT------ACGCCAAATAAC------CTAAT-AACCCTTGTGTTC-T----------------CTA-------TCTCTTTATAGTCGCGGAGAAT------GCT---TAGCCTGGATCACTCCACGTTC---AACG---ACGAT---GAC---------GA
dp5 XR_group8:4153700-4154020 - ATCAGCAGA---A-------------GCAGGGCAGGT----------------------CGACGCAACG------TCGTTACCACAT------ACTC-------CTCCGCTTC--TCCCCGCTG----TGGGTGCACAAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGGGCTTGGCGGCGGCGGCGGGCGAGCGAATCGTACAT--TAGTTTAGTTGTTCAGTCTGTGATTG-GATTATAA--ATTGGGTCTCTCTGCTCCT---C------------AGATGAAGAAGTTCCTAGTGAGAGA--GCCGTCTTGGGGG-------TT----GAGCATTAATAAAATGATT----AAC--C---C-AA------CGCCA-A-----------TGCTTTTGT------TTTCGTTGCAGTCGCAGAGACT------GCT---CAGCCTGGATCATTCCACGTTC---AATG---ACGAC---GAC---------GA
droPer2 scaffold_29:389454-389774 - ATCAGCAGA---A-------------GCAGGGCAGGT----------------------CGACGCAACG------TCGTTACCACAT------ACTC-------CTCCGCTTC--TCCCCGCTG----TGGGTGCACAAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGGGCTTGGCGGCGGCGGCGGGCGAGCGAATCGTACAT--TAGTTTAGTTGTTCAGTCTGTGATTG-GATTATAA--ATTGGGTCTCTCTGCTCCT---C------------AGATGAAGAAGTTCCTAGTGAGAGA--GCCGTCTTGGGGG-------TT----GAGCATTAATAAAATGATT----AAC--C---C-AA------CGCCA-A-----------TGCTTTTGT------TTTCGTTGCAGTCGCAGAGACT------GCT---CAGCCTGGATCATTCCACGTTC---AATG---ACGAC---GAC---------GA
droWil2 scf2_1100000004540:1198601-1198964 - GTACATAGA-----------------ACAATATGTACATACATATGTACTACGGCGGGTCGACGCAACGCCGTTGTCGTTACCACAT------ATGC-------CTCTGCATCTCTCCCCCTTA----TGGGTGCA-GAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGCGCTTGGC----------GGCGCCCACTGAGCAAAT--TAGTTTAGTTGCTTATACTGTGATTTAAATTATAATAAT-ATCGCTTTTAGTTCTTGTCCAG------------ATGAAGAAGTTACTAGTGAGCATAAGT-----CTATAT----TTGTT----AGGCAATAATA-----AAAGCT-AAA--C---T-AAT-CACCCATCCCTTTCTGTCTTTTTTCTTTTGTTTGTT-TTTCATTGTAGTCACGGAGAAT------GCT---TAGCCTGGATCATTCCACGTTA---AATG---ATGAC---GAT---------GA
droVir3 scaffold_13049:5292708-5292786 + TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTCATTGCAGTCACGGCGAATAAGTAGGCTTAGCAGCCTGGATCACTCCACGCTGGTTAATGACGACGAC---GAG---------GA
droMoj3 scaffold_6680:3655276-3655382 + GCTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTTTTCTATTT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTC-T----------------TTGTCT--C-CCTCATTACAGTCGCGACGTATTAGCAGGCTAAGCAGTCTGGATCACTCCACGCTG---GTCG---ACGAC---GAG---------GA
droGri2 scaffold_15110:13697275-13697459 - TTCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAAACGCGCATCTA----------------------------------AG------------ATGAAGAAGTTACTAGTGAGCGT--TT-----TCCCC-------AAAAACAGCAAAAAA--------AACGAATTT---G---T-AAT-TGTACTTTT-A----------------CTGTTTGTT-TGTTTTTTCAGTCACGTCGCATCAGTCGACTCAGCAGTTTCGATCATTCCACGCTG---GGTG---ACGATGAGAATGGGCACATGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCAGTAGC-----------------GCAAGCTACACGCA--------------------------------------------CACAGCACTACAGCCC----CG---------CCCCCGCTA--------------------------------------------------------------------------------------------------------------------------------------------------TGCCCGTCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--AC-----TGGGAC-------TG----GAGCCATT--------AATCAGCCA---C---T-AAT-ATTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGCGGAGAAT------GCT---TAGCCTGGAT............................................2611.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGAGCGC--AC-----TGGGAC-------T........................................................................................................................................................................1911.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGAAT------GCT---TAGCCTGGATCAATC.......................................2711.00100000000010000000
..................................CACGCA--------------------------------------------CACAGCACTACAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.......................................A--------------------------------------------CACAGCACTACAGCCC----CG---------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
droSec2
ATCAGTAGC-----------------GCAAGCTACACGCA--------------------------------------------CACAGCACTACAGCCC----CGCCC---CCGCCCCCGCTA--------------------------------------------------------------------------------------------------------------------------------------------------TCCCCGTCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--AC-----TGGGAC-------TG----GGGCCATT--------TATCAGCCA---C---T-AAT-ATTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................GTGATTG----------------------------------GG------------ATGAAGAAGTT...........................................................................................................................................................................................................2011.0010100
.............................................................................................................................................................................................................................................................................................................................................AGTTGCTCACTCTGTGATTG----------------------------------GG------------......................................................................................................................................................................................................................2211.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCGC--AC-----TGGGAC-------TG----GGGCCA.............................................................................................................................................................2411.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCATGTTG---AACG---ACGAT---G.............2011.0010010
.........................................................................................................................................................................................................................................................................................CTGATCTGGGCTTG------------GGGC................................................................................................................................................................................................................................................................................................................1880.1311000
dm3
ATCAGTAGC-----------------GCAGGCTACACGCA--------------------------------------------CACAACACTACAGTCC----CG---------CCCCCGCTA--------------------------------------------------------------------------------------------------------------------------------------------------CGCCCGACCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTCTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--AC-----TGGGAC-------TG----GAGTCATT--------CATCAGCCA---C---T-AAT-GTTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCGC--AC-----TGGGAC-------TG----...................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000200000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCAGTCGCGGAGAAT------GC..........................................................2113.0030000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GATTG----------------------------------GG------------ATGAAGAAGTT...........................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGAAT------GCT---TAGCCTGGA.............................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGAAGTTTCTAGTG....................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
................................................................................................................................................................................................................................................................................................................................................................G----------------------------------GG------------ATGAAGAAGTTTCTA.......................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GATCTGGGCTTG------------GGCAAGC.............................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACTGATCTGGGCTTG------------GGCAAG..............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCGC--AC-----TGGGAC-------TG----GAGT...............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------TATCTTTGCAGTCGCGGAGAAT------G...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGAAGTTTCTAGTGAGC.................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................GGCTTG------------GGCAAGCGATTTGTACA...................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AC-----TGGGAC-------TG----GAGTCATT--------C..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------GCT---TAGCCTGGATCAATCC......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAT------GCT---TAGCCTGGATCAATC.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACTCTCTGATTG----------------------------------GG------------ATGAAGAAG.............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G------------ATGAAGAAGTTTCTAGT.....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGTCGCGGAGAAT------G...........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATT--------CATCAGCCA---C---T-AAT-G............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTCGCGGAGAAT------GCT---......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CTCTGATTG----------------------------------GG------------ATGAAGA...............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAAGTTTCTAGTGAGCG................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTCGCGGAGAAT------GCT---TAGCCTG...............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCC-T----------------TTG-------TATCTTTGCAG.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................C-----TGGGAC-------TG----GAGTCATT--------CATC...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCC-T----------------TTG-------TATCTTTGCAGT............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................TTG----------------------------------GG------------ATGAAGAAGTTTC.........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-GTTATGCCC-T----------------TTG-------TATCTTTG................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGGAGAAT------GCT---TAGCCTGGA.............................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATCTGGGCTTG------------GGCAAGT.............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAT-GTTATGCCC-T----------------TTG-------TATCTTTG................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGATCAATCCATGTTG---AA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GATTG----------------------------------GG------------ATGAAGAAGTTTCTA.......................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CTGATTG----------------------------------GG------------ATGAAGAAG.............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----TGGGAC-------TG----GAGTCATT--------CAT................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TACAT--TAGTTTAGTTGCTCAC................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCC-T----------------TTG-------TATCTTTGCAG.............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCAATCCATGTTG---AACG---ACGA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTGAGCGC--AC-----TGGGAC-------TG----GA.................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGTTGCTCACTCTCTGATTG----------------------------------GG------------ATGAA.................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATTG----------------------------------GG------------ATGAAGAAGTTTCTA.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGAAT------GCT---TAGCCTGGATC...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGATTG----------------------------------GG------------ATGAAGAAGTTTC.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAT--TAGTTTAGTTGCTCACTC..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GATTG----------------------------------GG------------ATGAAGAAGTTTC.........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGCGGAGAAT------GCT---TAGCC.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................TGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGT.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGC--AC-----TGGGAC-------TG----GAGTC..............................................................................................................................................................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGAAT------GCT---TAGCCTGGATC...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAT------GCT---TAGCCTGGAT............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGTTGCTCACTCTCTGATTG----------------------------------GG------------ATGA..................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGAAT------GCT---TAGCCTGGAT............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGTCGCGGAGAAT------GCT---......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................ATTTGTACAT--TAGTTTAGTTG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCTCACTCTCTGATTG----------------------------------GG------------A.....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTG---AACG---ACGAT---GAC---------G.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTTG---AACG---ACGAT---GAC---------GA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CTGATCTGGGCTTG------------GGGC................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCAGTAGC-----------------GCAAGCTACACGCA--------------------------------------------CACAGCACTACAGCCC----CG---------CCCCCACT--------------------------------------------------------------------------------------------------------------------------------GCTGCTGCCACCCCCGCGTCAGTCACCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCAC--AC-----TGGAAC-------TG----AAGCCATG--------ATTCAGGCA---C---T-AAT-GTCATGTCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTA---AACG---AAGAT---GAC---------GASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC-T----------------TTG-------TATCTTTGCAGTCG..........................................................................2111.0010000100
........................................................................................................................................................................................................................................................................................................................................................CTGTGATTG----------------------------------GG------------ATGAAGA...............................................................................................................................................................................................................1811.0010000100
...................................................................................................................................................................................................................................................................................ACCCAACTGATCTGGGCTTG------------GGCAAGC.............................................................................................................................................................................................................................................................................................................2711.0010000100
droYak3
ATCAGTAGC-----------------GCAAGCTTCACGCA--------------------------------------------CACAGCACTACTGCCC----CG---------CCCCCACT--------------------------------------------------------------------------------------------------------------------------------GCCGCTGCCGCCCCCGCTTCAGCCACCCAACTGATCTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCGC--GC-----TGGGAC-------TG----GAGCCACG--------AATCAGCCA---C---T-AAT-GCTATGCCC-T----------------TTG-------TATCTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---AAC---------GASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGTCGCGGAGAAT------GCT---TAGCCTG...............................................2812.00202000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GC--GC-----TGGGAC-------TG----GAGCCACG--------AATCAGC............................................................................................................................................2711.00100100000000
droEug1
ATCAGCAGC-----------------GCAGGCTACACGCA--------------------------------------------CACA-CACT-CG--------------------------------------AA-------------------------------------------------------------------------------------------TACGTATGTGCCACCGCCCCCACAAC--------CCCTCGCTTCACCCGTCCAACTGAACTGGGCTTG------------GGCAAGCGATTTGTACAT--TAGTTTAGTTGCTTACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTC--AT-----TGAGAT-------TG----GGGCAGTA--------AATCATCGA---A---T-AAC-CAAATGTCC-T----------------TTG-------TATCTTTGTAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotal
No Reads
droBia1
ATCAGCAGC-----------------GCAGGCTACACACA--------------------------------------------CGCAA----------------------------------------------ACACGCACACACACCGCCCCCTCACCCAGCACCACCCCCACCCCTTTCCGCCCGC-----CCCCCTCTCCTCCCCTCCCC-CG--------------------------------------------------------CTCCCGACTGAACTGGGCTTG------------GGCGAGCGATTTGTACATTATAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTCACGC-----TGGGAT-------TG----GAGCAATA--------AATCAGGGAA--A---T-AA---------CC-T----------------TTGTCTCTC-TTTATTTGCAGTCACGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AACGATGACGAT---GAC---------GASizeHit CountTotal NormTotal
No Reads
droTak1
ATCAGCAGC-----------------GCAGGCTACACAT------------------------------------------------------ACCGCCCC-CTCG---------CCCCGGCCACGCCCCCCTCCCCACA---------------------------------------------------------------------------------------C--A-------------------------------------------CA-----TAGAACTCAGCTTG------------GGCGAGCGATTTGTACATTATAGTTTAGTTGCTCACTCTGCGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTCACGC-----TGGGTT------TTC----AAGCACTA--------AATCATTGAA--A---T-AAC-CGTGTGCCC-T----------------TTGTTT----GTTTCTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAATCCATGTTG---AATGACGACGAT---GAT---------GASizeHit CountTotal NormTotal
No Reads
droEle1
ATCAGCAGC-----------------GCAGGTTACATATA--------------------------------------------TATA-CACT-CAC--------TCCC---C--TCCCCCTT-----------------------------------------------------------------------------------------------------------------------------------------------------GCCATCCAACTGGGCTGGGCTTG------------GGCAAGCAATTTGTACAT--TAGTTTAG-TGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTTTAGTGAGCTCTCGC-----TGGGAT-------TC----GTACAGTA--------AATCATTGAA--T---T-AAC-CACATATCT-C----------------TTGTCTCTTCCA-TTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAGTCCATGTTG---AACGAAGACGAT---GAC---------GASizeHit CountTotal NormTotal
No Reads
droRho1
ATCAGCAGC-----------------GCAGGTTACATATA--------------------------------------------TAAA-CACC-----CT----CTCCC---CTTCA----------------------------------------------------------------------------------------------------------------------------------------------CCCCCTCGTTTCCCCCGCCCAACTGGGCTGGGCTTG------------GGCGAGCGATTTGTACAT--TAGTTTAGTTGCTCACTCTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTC--GC-----TGGGAT-------TC----CGACAATA--------AATCATCAA---A---T-AAC-CGCATGCCT-T-----------TTGTCTTG----TC-TCTTTTTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCAGTCCATGTTG---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotal
No Reads
droFic1
ATCAGCAGC-----------------GC------------------------------------------------------------------------------CCT------------CT-------------------------------------------------------------------------------------------------------------------------------------------------TTCCCCCGTCCAACTGAACTGGGCTTG------------GGCGAACGATTTGTACAT--TAGTTTAGTTGCTCACTTTGTGATTG----------------------------------GG------------ATGAAGAAGTTTCTAGTGAGCTC--TC-----TAGTT-------ACA----AGGCATAA--------TATAATATTA--A---C-AAC-TGTATACCT-T-----------CTCTTTCG----TT-CTTTCTTGCAGTCGCGGAGAAT------GCT---TAGCTTGGATCAATCCATGTTG---AACG---ACGAT---AAC---------GASizeHit CountTotal NormTotal
No Reads
droKik1
GC-AGCGGCAGAGGCAGAGACGACGGGCAGGTTAC---CA--------------------------------------------CACAGCACTGAGAACT----CTCCT---CCTCCCCCGCTA-GCTCGGC--------------------------------------------------------------------------------------------------------------------------------------------TCCATACAAGTGGCTTGTGCTTG------------GGCGAACGATTTGTACAT--TAGTTTAGTTGTTCACTCTGCGAGTG----------------------------------GGATTGCGCGTCAGATGAAGAAGTTTCTAGTGAGCTC--CC-----GG--ATCCATCGGAT----GGGCAA----------AA---GGCACCCATAACTAAC---CATGTCC-T-----------------TGTT---T-TCTCTCTGCAGTCGCGGAGAAT------GCT---TAGCCTGGATCACTCCACGTTG---AACG---ATGAC---GAT---------GASizeHit CountTotal NormTotal
No Reads
droAna3
ATCAGCAGC--------------------AGTTAC-----------------------------------------------CACAT------ACTGCCCGCTTCG---------GCCCGGCCCGGTCC---------GGCCCGCACTTCGCC----------------------------------CGCTGACACCCACTCACCTCCCGCCCATCCGTCCGTCACATACATACGTC---------------------------------CGTCCGTCCAGCTGAACTCAGCTTG------------GGCGAGCGATTTGTACAT--TAGTTTAGTTGTTCACTCAGTGATTG----------------------------------GGATTGTTTGCTCGATGAAGAAGTTTTTAGTGAGCTC--GC-----TGGCAC-------TG----GAAT------ACGGCGAATAGC------CTAAT-AAC-C-CATGTTT-T----------------CTC--T--A-TCTCATTATAGTCGCGGAGAAT------GCT---TAGCCTGGATCACTCCACGTTC---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................TGTTCACTCAGTGATTG----------------------------------GG..................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAT------GCT---TAGCCTGGATCACTC.......................................2311.001010000
..............................................................................................................................................................................................................................................................................CGTCCGTCCAGCTGAACTCAGCTTG------------GGC.................................................................................................................................................................................................................................................................................................................2811.001010000
droBip1
ATCAGCAGC--------------------AGTTAC-----------------------------------------------CACAT------ACTGCCCGCTTCG---------GCCCGACCC--------------GGCCCGCACTTCGCC------------------------------------CTGACACCCACTCAGCTCCCGCCCCTCCGACCG-----TACGTCCGTC---------------------------------CGTCCGTCCAGCTGAACTCAGCTTG------------GGCGAGCGATTTGTACAT--TAGTTTGGTTGTTCACTCAGTGATTG----------------------------------GGATTGTTTGCTCGATGAAGAAGTTTTTAGTGAGCTC--GC-----TGGCAT-------TA----GAAT------ACGCCAAATAAC------CTAAT-AACCCTTGTGTTC-T----------------CTA-------TCTCTTTATAGTCGCGGAGAAT------GCT---TAGCCTGGATCACTCCACGTTC---AACG---ACGAT---GAC---------GASizeHit CountTotal NormTotal
No Reads
dp5
ATCAGCAGA---A-------------GCAGGGCAGGT----------------------CGACGCAACG------TCGTTACCACAT------ACTC-------CTCCGCTTC--TCCCCGCTG----TGGGTGCACAAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGGGCTTGGCGGCGGCGGCGGGCGAGCGAATCGTACAT--TAGTTTAGTTGTTCAGTCTGTGATTG-GATTATAA--ATTGGGTCTCTCTGCTCCT---C------------AGATGAAGAAGTTCCTAGTGAGAGA--GCCGTCTTGGGGG-------TT----GAGCATTAATAAAATGATT----AAC--C---C-AA------CGCCA-A-----------TGCTTTTGT------TTTCGTTGCAGTCGCAGAGACT------GCT---CAGCCTGGATCATTCCACGTTC---AATG---ACGAC---GAC---------GASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................TCCCCGCTG----TGGGTGCACAAG---------------------------------------------------------------------------------------C--.................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100100000
...................................................................................................................................................................................................................................................................................................................................AT--TAGTTTAGTTGTTCAGTCT.............................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................CTGGGCTTGGCGGCGGCGG......................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................................................GCGGGCGAGCGAATCGTACAT--TAGTT...........................................................................................................................................................................................................................................................................................2611.0010000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTAGTGAGAGA--GCCGTCTTGGGG.................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................................................TAGCTGGGCTTGGCGGCGGCG.......................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................ACAT--TAGTTTAGTTGTTCAGTCTGTG..........................................................................................................................................................................................................................................................................2611.0010000010000
...................................................................................................................................................................................................................................................................................................................................................................ATTATAA--ATTGGGTCTCTCTG.............................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGACT------GCT---CAGCCTG...............................................1911.0010100000000
droPer2
ATCAGCAGA---A-------------GCAGGGCAGGT----------------------CGACGCAACG------TCGTTACCACAT------ACTC-------CTCCGCTTC--TCCCCGCTG----TGGGTGCACAAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGGGCTTGGCGGCGGCGGCGGGCGAGCGAATCGTACAT--TAGTTTAGTTGTTCAGTCTGTGATTG-GATTATAA--ATTGGGTCTCTCTGCTCCT---C------------AGATGAAGAAGTTCCTAGTGAGAGA--GCCGTCTTGGGGG-------TT----GAGCATTAATAAAATGATT----AAC--C---C-AA------CGCCA-A-----------TGCTTTTGT------TTTCGTTGCAGTCGCAGAGACT------GCT---CAGCCTGGATCATTCCACGTTC---AATG---ACGAC---GAC---------GASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................GCACAAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGGGC...................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGACT------GCT---CAGCCTGGATC...........................................2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGAAGTTCCTAGTGAG..................................................................................................................................................................................................2011.001000001
......................................................................................................................................................................................................................................A-------------------------------------------CAT-----GTAGCTGGGCTTGGC..............................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAGA--GCCGTCTTGGGGG-------TT----GAGC...............................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................GTAGCTGGGCTTGGCGGC...........................................................................................................................................................................................................................................................................................................................1820.501100000
droWil2
GTACATAGA-----------------ACAATATGTACATACATATGTACTACGGCGGGTCGACGCAACGCCGTTGTCGTTACCACAT------ATGC-------CTCTGCATCTCTCCCCCTTA----TGGGTGCA-GAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGCGCTTGGC----------GGCGCCCACTGAGCAAAT--TAGTTTAGTTGCTTATACTGTGATTTAAATTATAATAAT-ATCGCTTTTAGTTCTTGTCCAG------------ATGAAGAAGTTACTAGTGAGCATAAGT-----CTATAT----TTGTT----AGGCAATAATA-----AAAGCT-AAA--C---T-AAT-CACCCATCCCTTTCTGTCTTTTTTCTTTTGTTTGTT-TTTCATTGTAGTCACGGAGAAT------GCT---TAGCCTGGATCATTCCACGTTA---AATG---ATGAC---GAT---------GASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................AGTTACTAGTGAGCATAAGT-----CT....................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................ATCGCTTTTAGTTCTTGTC.....................................................................................................................................................................................................................................1911.00100010
.................................................................................................................TCTCCCCCTTA----TGGGTGCA-GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGTCCAG------------ATGAAGAAGT............................................................................................................................................................................................................2111.00100001
...............................................................................................................................................................................................................................................................................................TGCGCTTGGC----------GGCGCCCACTGAGC......................................................................................................................................................................................................................................................................................................2411.00100010
...............................................ACTACGGCGGGTCGACGCAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................................................................................................................................................................................................AT-----GTAGCTGCGCTTGGC----------G...................................................................................................................................................................................................................................................................................................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTT-TTTCATTGTAGTCACGGAGAAT------G...........................................................2811.00110000
......................................................................................................................................CA-GAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----GTAGCTGCGCT..................................................................................................................................................................................................................................................................................................................................2111.00100001
.................................................................................................................TCTCCCCCTTA----TGGGTGCA-GAG---------------------------------------------------------------------------------------C--A-------------------------------------------CAT-----G............................................................................................................................................................................................................................................................................................................................................2811.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGTT-TTTCATTGTAGT............................................................................2111.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................GTCCAG------------ATGAAGAAGTTACTAGTGAGC.................................................................................................................................................................................................2711.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTCCAG------------ATGAAGA...............................................................................................................................................................................................................1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTT-TTTCATTGTAGTCACGG.......................................................................2111.00101000
......................................................................CGTTGTCGTTACCACAT------ATGC-------CTCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCTGGATCATTCCACGTTA---AATG---......................2611.00101000
droVir3
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTCATTGCAGTCACGGCGAATAAGTAGGCTTAGCAGCCTGGATCACTCCACGCTGGTTAATGACGACGAC---GAG---------GASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGTCACGGCGAATAAGT..............................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGCCTGGATCACTCCA.....................................2111.001000000000000000000000000000000010000000000000000000000000000000
.T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTCATTGCAGTCACGGCG.....................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCACGGCGAATAAGTAGGC..........................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAATAAGTAGGCTTAGCAG...................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATTGCAGTCACGGCGA....................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGCGAATAAGTAGGCTT........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCACGGCGAATAAGTAGGCT.........................................................2511.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAATAAGTAGGCTTAGCAGC..................................................2311.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTAATGACGACGAC---GAG---------GA2211.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATTGCAGTCACGGCGAATAAGTA.............................................................2711.001000000000000000000000000000000000100000000000000000000000000000
droMoj3
GCTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTTTTCTATTT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTC-T----------------TTGTCT--C-CCTCATTACAGTCGCGACGTATTAGCAGGCTAAGCAGTCTGGATCACTCCACGCTG---GTCG---ACGAC---GAG---------GASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCAGGCTAAGCAGTCT................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCT--C-CCTCATTACAGTCGCGA.......................................................................2211.001100000
droGri2
TTCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAAACGCGCATCTA----------------------------------AG------------ATGAAGAAGTTACTAGTGAGCGT--TT-----TCCCC-------AAAAACAGCAAAAAA--------AACGAATTT---G---T-AAT-TGTACTTTT-A----------------CTGTTTGTT-TGTTTTTTCAGTCACGTCGCATCAGTCGACTCAGCAGTTTCGATCATTCCACGCTG---GGTG---ACGATGAGAATGGGCACATGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTG---ACGATGAGAATGGGCAC.....2111.00101
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTCCACGCTG---GGTG---ACGATGAG..............2611.00110

Generated: 05/19/2015 at 01:58 AM