ID:

dsi_25528

Coordinate:

3r:10497783-10497927 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-13.3	-13.3	-13.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATACTTTTAAGAAGCGAAATATTATTATTATATTGAACCATGGAGAATAGGTTTGGCCTGTAAAATTATTATTTGCTTTGTTAAATATTTGGTCTTTTCTAGCTATTATTCTTAAACAGCTGATGTAAACACTTCGCAACACTACCAAGAGAGCTAACATTTAAAAATAAATTACGAAATAATCTTTTATTGCAGTATTGGTGGTAAAGGCTTTACATTCAAGTTAGAGAGCGAAGTGCTTTTGT ************************************************.......((((((((..((((((....((((....(((((.........(((((....(((((....((.((.(((.........))).))))...))))))))))........)))))....))))))))))..))..))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	O002 Head	O001 Testis	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries
.........................................................................................................................................AACACTACCAAGAGAGCT..........................................................................................	18	0	1	7.00	7	6	1	0	0	0	0
............................................................................................TATTTTCTAGCTATTATACT.....................................................................................................................................	20	2	2	0.50	1	0	0	1	0	0	0
..........................................GAGAATAGGTTAGGAGTGTAA......................................................................................................................................................................................	21	3	3	0.33	1	0	0	0	1	0	0
..............................................ATAGGTTCGGCGTGTAA......................................................................................................................................................................................	17	2	5	0.20	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................AGTTAGAGATCGAAG.........	15	1	12	0.08	1	0	0	0	0	1	0
...................................................................................................................................................................................................................CTTACATTCATGCTAGAGA...............	19	3	19	0.05	1	0	0	0	0	1	0
...................................................................................................................................................CGAGCGGTAACATTTAAAAA..............................................................................	20	3	20	0.05	1	0	0	0	0	1	0
.....TTTAAGAAGCGATATAA...............................................................................................................................................................................................................................	17	2	20	0.05	1	0	0	0	0	0	1

Anti-sense strand reads

TATGAAAATTCTTCGCTTTATAATAATAATATAACTTGGTACCTCTTATCCAAACCGGACATTTTAATAATAAACGAAACAATTTATAAACCAGAAAAGATCGATAATAAGAATTTGTCGACTACATTTGTGAAGCGTTGTGATGGTTCTCTCGATTGTAAATTTTTATTTAATGCTTTATTAGAAAATAACGTCATAACCACCATTTCCGAAATGTAAGTTCAATCTCTCGCTTCACGAAAACA ************************************************.......((((((((..((((((....((((....(((((.........(((((....(((((....((.((.(((.........))).))))...))))))))))........)))))....))))))))))..))..))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	M024 male body	SRR553488 RT_0-2 hours eggs	M023 head	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries
.............................................................................................................................................GATGGTTCTCTCGATTGTAAA...................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................GATGGTTGACTCGATTGT......................................................................................	18	2	18	0.11	2	0	1	0	1	0	0
...........................................TCGTATCCAAGCCAGACAT.......................................................................................................................................................................................	19	3	9	0.11	1	0	1	0	0	0	0
................................................................................................................................TGTGAAGAGTTCTGATGTT..................................................................................................	19	3	17	0.06	1	0	0	1	0	0	0
...............................................................................................................................TTGTGAAGAGCTCTGATG....................................................................................................	18	3	20	0.05	1	0	0	1	0	0	0
.......................................................................................................................................................TCGATTGTAAACTTTTA.............................................................................	17	1	20	0.05	1	0	0	0	0	0	1
............................................................................AAAAAATTTATAAACCA........................................................................................................................................................	17	1	20	0.05	1	0	0	0	0	1	0

Generated: 04/24/2015 at 10:43 AM