ID:

dsi_2552

 Coordinate:

3l:21577149-21577298 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8 -7.3 -7.3 -7.2

Flybase annnotation

three_prime_UTR [3l_21577344_21577827_-]; exon [3l_21577344_21577900_-]

No Repeatable elements found

Sense Strand Reads

#####-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAAGGATATTATTCAGACAAGTTTTTGAACGAGTAGTACACTTAGGTAATTTATTTTTCAAACTGTTACATCAAACGATAAATTCTATGTTAGTAAACGCATAAGTCTGGATTCGACAATCAATTTGTACTAGAAATTACGCAGCAGCAAGATCGGACAATTAGCCATCGAACTTTCCAGTGTTTACATTAGTGGTTTAGTTCCAGGCACTGCTGATCAGTTTGTCCTATGAGCAATGTGAACCTTCCTT
*************************************************************************************...((........((.(((.(((((.....((((.....)))).)))))..))).)).....................))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR902009
testis
 M024
male body		 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
........................................................................................................................................................................................................TTCCAGGCACTGCTGATCAGTA............................ 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................TAAGTCTGGATTCAACAATCAATT............................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTTAGTTCCAGGCACTGCTGATCAGT............................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................TATGTTAGTAAACGCATAAGTCTGGA........................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CCGCTGATCAGTCTGTCCTAT.................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................TTTGAACGAGTAGTACACTT............................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................TCGGACAATTAGCCATCGAAAA............................................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................TTTTTGAATGAGTAGTACACT................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................AAGTCTGGATTCGACAATCA................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................TTGAACGAGTAGTACACTTAG............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................GCAAGATCGGACAATTAGC..................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................AGTCTGGATTCGACAATCAA............................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................TAGTTCCAGGCACTGCTGATC................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGTTCCAGGCACTGCTGAT................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAAGTCTGGATTCGACAATCAATT............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................TTTTCAAACTGTTACATCAAAAA............................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................ATAAGTCTGGATTCGACA.................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................AACGCATAAGTCTGGATTCGA...................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................ATAAGTCTGGATTCAACAAAA................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGGCGCCGCTGATCAGTCTGT......................... 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTCCCATGAGCAATGCGTACC...... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................GCATTAGTGGTTTAG.................................................. 15 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................GCTGATCAGATTGTC........................ 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................CAGCAGCTAGATCAGACATT......................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................CACTAGTGGTTTAGTG................................................ 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTCCTATAATAAGTCTGTTCAAAAACTTGCTCATCATGTGAATCCATTAAATAAAAAGTTTGACAATGTAGTTTGCTATTTAAGATACAATCATTTGCGTATTCAGACCTAAGCTGTTAGTTAAACATGATCTTTAATGCGTCGTCGTTCTAGCCTGTTAATCGGTAGCTTGAAAGGTCACAAATGTAATCACCAAATCAAGGTCCGTGACGACTAGTCAAACAGGATACTCGTTACACTTGGAAGGAA
*************************************************************************************...((........((.(((.(((((.....((((.....)))).)))))..))).)).....................))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M023
head
 M053
female body
 M024
male body
.............................................................................................................................................................................................................CCGTGGCGACTAGTCAGACAGGATACT.................. 27 2 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AGCTTGAAAGGTCACAAATGTAATCAC........................................................ 27 0 1 4.00 4 1 2 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................CCGTGACGACTAGTCAAACAGGATACT.................. 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
........................................................AAGTTTGACAATGTAGTTTGCTATTT........................................................................................................................................................................ 26 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0 0
...............................................................................................................AAGCTGTTAGTTAAACATGATCTTTAAT............................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CGGTAGCTTGAAAGGTCACAAATGTAAT........................................................... 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
...............................................................................................TTGCGTATTCAGACCTAAGTTGTTAGT................................................................................................................................ 27 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGACTAGTCAGACAGGATACTCGT............... 26 2 1 3.00 3 0 0 0 0 1 2 0 0 0 0 0
..........................................................................TGCTATTTAAGATACAATCAT........................................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................AAGCTGTTAGTTAAACATGATCTT................................................................................................................... 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................................TCCGTGGCGACTAGTCAGACAGGAT..................... 25 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAGGTCCGTGGCGACTAGTCAGACAGGAT..................... 29 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
.......................................................................................................................................................................AGCTTGAAAGGTCACAAATGTAAT........................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................CTGTTAGTTAAACATGATCTT................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0
...........................................................................................TCATTTGCGTATTCAGACCTA.......................................................................................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................TTGCGTATTCAGACCTAAGCTGTTAGTT............................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCGTGACGACTAGTCAAACAGGATACTCGT............... 30 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCGTGACGACTAGTCAAACAGGATACTC................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CGTAGCTTGAAAGGTCACAAA................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TCAAGGTCCGTGACGACTAG................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GTGGCGACTAGTCAGACAGG....................... 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................CTTTAATGCGTCGTCGTTCTAGCCTG............................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
............................................................TTGACAATGTAGTTTGCTATTTAAGA.................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........ATAAGTCTGTTCAAAAACTTG............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................AGTTAGCTATTTAAGATACAATCAT........................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................TCCGTGGCGACTAGTCAGACA......................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................AAAAAGTTTGACAATGTAGTTTGCTAT.......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................ATCGGTAGCTTGAAAGGTCAC.................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................AATCGGTAGCTTGAAAGGT....................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTCCGTGACGACTAGTCAAACAGGAT..................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGGCGACTAGTCAGACAGGATA.................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGACTAGTCAGACAGGATAC................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................TTGCGTATTCAGACCTAAGCTGTTAGT................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................CATTTGCGTATTCAGACCTAAGCTGT.................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGACTACTCAGACAGGATACTCGTT.............. 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................TTGACAATGTAGTTTGCTATTTAAGAT................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................AGACCTAAGCTGTTAGTTAAA............................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................CACCAAATCAAGGTCCGTGGCGACTAGTCA............................. 30 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGTCGTTCTAGCCTGT........................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGACTAGTCAAACAGGATACT.................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTAGCTTGAAAGGTCACAAATGTTAT........................................................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................TCAGATCTAAGTTGTTAGTTAAACATGAT...................................................................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGGTCCGTGACGACTAGTCAA............................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................GCGTCGTCGTTCTAGCCTGTT.......................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ACAGGATACTCGTTACACTTGGAAGGAA 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TGCGTCGTCGTTCTAGCCTGTT.......................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................TTGCGTATTCAGACCTAAGTTGTTAGTTAA............................................................................................................................. 30 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGACTAGTCAAACAGGATACTCGT............... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................TTAAGATACAATCATTTGCGTATTCAGAC............................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................GGTTTGCTATTTAAGATACAATCATT.......................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................ACAGGATACTCGTTACACTTGGAAGGA. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................AGTTTGCTATTTAAGATACAATCATT.......................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................CGTTCTAGCCTGTTAATCGGT................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................AAGTTTGACAATGTAGTTTGCTAT.......................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CAGACAGGATACTCGTTACACTTGGAAGGA. 30 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TTGCGTATTCAGACCTAAGTTGTTAGTT............................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CGGTAGCTTGAAAGGTCACAAATGT.............................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GACGACTAGTCAAACAGGATACTCGT............... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CACCAAATCAAGGTCCGTGGCGACTAGT............................... 28 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................AGATACAATCATTTGCGTATTCAGACCT........................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AGCTTGAAAGGTCACAAATGTAATCACC....................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GACAGGATACTCGTTACACTT........ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................AAAAAAACTTGCTCATCATGTGAATCCATT......................................................................................................................................................................................................... 30 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GGTAGCTTGAAAGGTCACAAA................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................TTGCTCATCATGTGAATCCAT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................GTTCTAGCCTGTTAATCGGTAG................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................CTCATAGTGTGAATCCAT.......................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
......................AAAAATTGCTTATCATTTGAA............................................................................................................................................................................................................... 21 3 10 0.20 2 0 0 0 0 0 0 2 0 0 0 0
................................................................................................................AGCTGCTAGTTAAACGTG........................................................................................................................ 18 2 11 0.18 2 0 0 0 0 0 0 0 0 0 0 2
.........ATAAGTCTGTTCCAA.................................................................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................CTGTTAGTTAAACGTG........................................................................................................................ 16 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
..........TAAGTCTGTTCCAAA................................................................................................................................................................................................................................. 15 1 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21577099-21577348 - dsi_2552 GAAGGATATTATTCAGACA----------------------AGTTTTTGAA--CGA-------------GTAG-------T---ACACTTAGGTAATTTATTTTTCAAACTGTTACATCAAACGATAAATTCT-----ATG----------------------------------TTAGTAAACGCATAAGT--------------------------------------------------------------CTG---GATTCGAC-AATCAATTTGTACTAGAAATTACGCAGCAGCA----------------------------------------------------------------------------------AGATCGGACAATTAGCCATCGAACTTTCCA--GT-----GTTTAC-ATT-------------AGTGGTTTAGTTCCAGGCACTGCTGATCAGTTTGTCCTATGAGCAATGTGAACCTTCCTT
droSec2 scaffold_11:1994961-1995210 - GAAGGATATTATTCAGACA----------------------AGTTTTTGAA--CGA-------------GTAG-------T---ACACTTAGGTAATTTATTTTTCAAACTGTTACATCAATCGATAAATTCT-----ATG----------------------------------TTAGTAAACGCATAAGT--------------------------------------------------------------CTG---GATTCGAC-AATCAATTTGTACTAGAAATTACGCAGCAGCA----------------------------------------------------------------------------------AGATCGGACAATTAGCCATCGAACTTTCCA--GT-----GTTTAC-ATT-------------AGTGGTTTAGTTCCAGGCACTGCTGATCAGTTTGTCCTATGAGCAATGTGAACCTTCCTT
dm3 chr3L:22060117-22060374 - GAAGGATATTATTCAGACA----------------------AGTTTTTAAA--CGAACA-TC-------GTAG-------T---AC-----GATATTTTATTTTTCAAACTGTTACATCGAAC-----ATTCTACAATATG----------------------------------TT-GTAAACATA-------------------------------------------------------------------CTG---GCTTCGAA-AATCAATTTGTACTACAAATTACGTAGTAGCA--------------------ATGT--AT--------------------------------------------------GCCTAGATCCGTCAATTAGCCATCGAACTTTCCA--GT-----GTTTAC-AATA--GTGGT-------TGGTTTAGTTCTAGGTACCGCTGATCAGTCTGTTCTATGAGCAATATAAACCTTCCTT
droEre2 scaffold_4784:21736210-21736502 - TACGCACATCATAAATTGA----------------------CGTTCGTGAAAACGCTCA-TAGTAATTAATCT-------T---AC---------ATTTATTTTTCAGATTGTTACATCAAACTATATATTCT-----ATT----------------------------------TTAGTAAACGTATTATT------------------------------------GGAAACTTTTGATGAAGTTTAACCTACTT---AATTAGAC-AATCAATTT---------------------------CAGGATTTACTTTGAAATTT--TT--------------------------------------------------TCCAAGATCCGACAATTATCGATCGAAGTTTCCA--TT-----GGATAC-ATAA--GTGGATTATTCGCGGTCTGGTTCCAGGTACCGCCGATCAATTGGTTCTTTGAGAAAT--TAACCTTCCTT
droYak3 v2_chr3L_random_016:31307-31629 - GGAAGATATTGTTTAGAC-------------GGCAAATTGACATTCGTCGAAACACTCA-AGATAATAAATCG-------T---ACACTTAAATCATTTATTTTTCAAACTGTTACATTAGACGATATAATCT-----ATT----------------------------------TTACTTAATT---------------------------------------------AAACTCTTGATCGAGTTTAACCA----TCAATTTAGAC-AATCAATTTGTTCTAATAATTATGTGGTAGCAATTTCATTATTTACTTTGAAGTGT--AC--------------------------------------------------GCCAAGATCCGACAATTATCGGTAAAAGTTTCCA--GT-----GGTTAC-ATTA--ATGGCTTATTCGCGGTCTAG-TCCAGGTACCGCTGATCTATTGGTTCTATGAACAAT------TAACCTT
droEug1 scf7180000409472:899726-900051 - GGATAATAGTATTTAGAAA-----------CGACAAA-CAACT-TCTTCGATTTATTTGTATATA----ATCT-------TGCGATACTCAAGTCCATTACATTTCAAATAAGTATATCAAAATAGATATTCA-----TTT----------------------------------TTATTGAACTACTAAACGTTTACACACTAATAACTTGATCGGCTGCTATTAAGGG--GC--TTAAGAAGGTTTACATGA----------------------CTTT--------------TTCCTTA-----------------------------------AATAAGGGATATTGGTCATAAAAGTTGATCTAGGCTAT---------------------TTTTTTTAG-TTTTTTCA--GT-----GGAAACTATTT--TTGTTTTATTGGCGGTACTGGTCCAGGTACCACGGATTCGTT--------GAGAAAT--ATTCCACCTTC
droBia1 scf7180000302377:1213506-1213697 + GAAAAATAATCTGCAATCCAATGTGCCTTTTTGGAAAACAAAGTTTTTAAA--TA-----TC-------GTATTCAAGTTT---AAATCGAAATCATTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-----------------------------------------------------------TTCTTTAATTCTTGGAAATAACTCATGGAATCCAGTGT-------------------TTTATGAA--------------------TAGT-TTCAGTATGTTTTATTAACCGCCTTG-GACAGGTACCGCGGATTAGCTG---------------------TCCCTC
droTak1 scf7180000415261:628060-628330 + AAATGACACTAAACACTT--------------------------T-------TTACTT-----------------------------------------------------GTTCTAACAA----TATTA-----------GAATATATATTTTAGTGATCGTGATATATTTTTT-----------------------------------------------------AAAAATTTTT-----TGCTTAA--TATTC---GCTGAAAA-ACTTAATTC---------------------------CAAGATTTATGGCATGATTTATTGACCGTAATGTAACTTTTATTAGTGGAAAAAACGAATCCAGCCAAGCGTTCCTTTGGATTTTA-------------------CCATTTTTTCGGGGTAGA-ATTA--GTGATTTATTAGCGGTAC---TGTAGGTAGCGCGGATTAGCC-----------------GTTCCATCTTC
droEle1 scf7180000491199:757909-757973 + AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCA--GT-----GGAAAT-----------TTTATAAGCGTTCTCGATCCAGGTATCGCGGATTAGAC-----------------GACCCATCCGC
droRho1 scf7180000777891:8188-8237 + TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTAGCGGTCTTCATACAGGTACCCCTGT------------------AAGACGTCTCATCCTC
droFic1 scf7180000453945:225085-225142 - AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCTAGGTTCAGGTACTCTGGACTGTTTTGTCTC-T----AAGTTTTCCTACCCTC
droKik1 scf7180000302626:203416-203421 + TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCG
droBip1 scf7180000396707:227953-228182 + TATTACTTGTATCTT----------CTATTCTGGAGGACAACATTGGTAG----------------------------------------------TCCACTTGCG---------------------------------------------------------------------TT-CCA------------------------------------------------------------------AGGCCA----CGAACCTAATAAATCCAATCTGGTCTGGTA-------------------------------------CCCGGCTAGTATCTCGTACTTTACCCTTGGGAAGACTACAC---------------CCAAAGTGCCTGGCTTATTGCTGATATTCCCGT--CT-----GGCGGG-GTTT--CATTATGATTAGCGATAA-TTCCCAGGTACAGAGGATTATCCC----------------ATACCTCCCGA
droGri2 scaffold_15110:9102269-9102270 + TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAAGGATATTATTCAGACA----------------------AGTTTTTGAA--CGA-------------GTAG-------T---ACACTTAGGTAATTTATTTTTCAAACTGTTACATCAAACGATAAATTCT-----ATG----------------------------------TTAGTAAACGCATAAGT--------------------------------------------------------------CTG---GATTCGAC-AATCAATTTGTACTAGAAATTACGCAGCAGCA----------------------------------------------------------------------------------AGATCGGACAATTAGCCATCGAACTTTCCA--GT-----GTTTAC-ATT-------------AGTGGTTTAGTTCCAGGCACTGCTGATCAGTTTGTCCTATGAGCAATGTGAACCTTCCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGGCACTGCTGATCAGTA............................2211.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTTCCAGGCACTGCTGATCAGT.............................2611.00101000000000000000
....................................................................................................................................T-----ATG----------------------------------TTAGTAAACGCATAAGT--------------------------------------------------------------CTG---GA...................................................................................................................................................................................................................................................2611.00100000001000000000
.............................................TTTGAA--CGA-------------GTAG-------T---ACACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCGGACAATTAGCCATCGAAAA.................................................................................................2211.00110000000000000000
............................................................................................................................................................................................AAGT--------------------------------------------------------------CTG---GATTCGAC-AATCA.......................................................................................................................................................................................................................................2011.00100001000000000000
..............................................TTGAA--CGA-------------GTAG-------T---ACACTTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..........................................................................................................................................................................................................................................................................................................GCA----------------------------------------------------------------------------------AGATCGGACAATTAGC..........................................................................................................1911.00110000000000000000
.............................................................................................................................................................................................AGT--------------------------------------------------------------CTG---GATTCGAC-AATCAA......................................................................................................................................................................................................................................2011.00100001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTCCAGGCACTGCTGATC................................2111.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTCCAGGCACTGCTGAT.................................2011.00100000000100000000
...........................................................................................................................................................................................TAAGT--------------------------------------------------------------CTG---GATTCGAC-AATCAATT....................................................................................................................................................................................................................................2411.00100000010000000000
.....................................................................................................TTTTCAAACTGTTACATCAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
..........................................................................................................................................................................................ATAAGT--------------------------------------------------------------CTG---GATTCGAC-A...........................................................................................................................................................................................................................................1811.00101000000000000000
.....................................................................................................................................................................................AACGCATAAGT--------------------------------------------------------------CTG---GATTCGA..............................................................................................................................................................................................................................................2111.00100000000100000000
droSec2
GAAGGATATTATTCAGACA----------------------AGTTTTTGAA--CGA-------------GTAG-------T---ACACTTAGGTAATTTATTTTTCAAACTGTTACATCAATCGATAAATTCT-----ATG----------------------------------TTAGTAAACGCATAAGT--------------------------------------------------------------CTG---GATTCGAC-AATCAATTTGTACTAGAAATTACGCAGCAGCA----------------------------------------------------------------------------------AGATCGGACAATTAGCCATCGAACTTTCCA--GT-----GTTTAC-ATT-------------AGTGGTTTAGTTCCAGGCACTGCTGATCAGTTTGTCCTATGAGCAATGTGAACCTTCCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTTCCAGGCACTGCTGATCA...............................2311.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAATGTGAACCTTCCT.2011.0011000
.........................................................................................................CAAACTGTTACATCAATCGA............................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
dm3
GAAGGATATTATTCAGACA----------------------AGTTTTTAAA--CGAACA-TC-------GTAG-------T---AC-----GATATTTTATTTTTCAAACTGTTACATCGAAC-----ATTCTACAATATG----------------------------------TT-GTAAACATA-------------------------------------------------------------------CTG---GCTTCGAA-AATCAATTTGTACTACAAATTACGTAGTAGCA--------------------ATGT--AT--------------------------------------------------GCCTAGATCCGTCAATTAGCCATCGAACTTTCCA--GT-----GTTTAC-AATA--GTGGT-------TGGTTTAGTTCTAGGTACCGCTGATCAGTCTGTTCTATGAGCAATATAAACCTTCCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTACCGCTGATCAGTCTGT.........................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010200000000000000000000000000
............................................................................................................................................................................................................................................................................................................A--------------------ATGT--AT--------------------------------------------------GCCTAGATCCGTCA................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001010
..........................................................................................................................................................................................................................................................................................................................................................................................................TTAGCCATCGAACTTTCCA--GT-----...................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGAGCAATATAAACCTTCCT.2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTGTTCTATGAGCAAT.............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCCATCGAACTTTCCA--G.........................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTTTTCAAACTGTTACATCGA................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A--GT-----GTTTAC-AATA--GTGGT-------..........................................................1813.0030000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGTACCGCTGATCAGTCT...........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTCTGTTCTATGAGCAA..............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTGTTCTATGAGCAA..............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGATCAGTCTGTTCTAT....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATA--GTGGT-------TGGTTTAGTTCTA.............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CGTAGTAGCA--------------------ATGT--AT--------------------------------------------------GCCTA.........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTTCTAGGTACCGCTG...................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGCCATCGAACTTTCCA--GT-----GT.................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................T-GTAAACATA-------------------------------------------------------------------CTG---GCTTCGA..............................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CCTAGATCCGTCAATTAGC..........................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CA--GT-----GTTTAC-AATA--GTGGT-------TGG.......................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTCGAA-AATCAATTTGTACTA.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATATTATTCAGACA----------------------AGTTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CGTAGTAGCA--------------------ATGT--AT--------------------------------------------------GCCTT.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATTCAGACA----------------------AGTTTTTAAA--CG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-AATA--GTGGT-------TGGTTTAGT.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TCGAA-AATCAATTTGTACTAC............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AT--------------------------------------------------GCCTAGATCCGTCAATTA............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................TG---GCTTCGAA-AATCAATT....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AATA--GTGGT-------TGGTTTAGTTCTAGG...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............TCAGACA----------------------AGTTTTTAAA--CGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATATTATTCAGACA----------------------AGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TGT--AT--------------------------------------------------GCCTAGATCCGTCAATTA............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GT-----GTTTAC-AATA--GTGGT-------TGGT......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCA--------------------ATGT--AT--------------------------------------------------GCCTAGATCCGT..................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTATGAGCAATATAAACCT.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTCAAACTGTTACATCGAAC-----A........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................A--CGAACA-TC-------GTAG-------T---AC-----GATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................ATCGAAC-----ATTCTACAATATG----------------------------------T.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTCTAGGTACCGCTGATC................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGGTACCGCTGATCAGTC............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAGTTCTAGGTACCGC.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TATTCAGACA----------------------AGTTTTTAAA--CG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCCTAGATCCGTCAATTAGC..........................................................................................................2011.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGTTCTATGAGCAA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGTCTGTTCTATGAGC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................ATGT--AT--------------------------------------------------GCCTAGATCCGTCAAA..............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTCTGTTCTATGAGCA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........TTCAGACA----------------------AGTTTTTAAA--CGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........TTCAGACA----------------------AGTTTTTAAA--CGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TACAAATTACGTAGTAGCA--------------------ATG.....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TA-------------------------------------------------------------------CTG---GCTTCGAA-AATCAATT....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................T--AT--------------------------------------------------GCCTAGATCCGTCAATTT............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TACAAATTACGTAGTAGCA--------------------AT......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TATTATTCAGACA----------------------AGTTTTTAAA--CGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTTTTCAAACTGTTACATCG.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGACA----------------------AGTTTTTAAA--CGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ACGTAGTAGCA--------------------ATGT--AT--------------------------------------------------GCCT..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TACGTAGTAGCA--------------------ATGT--AT--------------------------------------------------GCC...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
GAAGGATATTATTCAGACA----------------------AGTTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCAATTTGTACTACAAATTAC.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GTTTAC-AATA--GTGGT-------TGGTT.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................TAGATCCGTCAATTAGCCAT.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCTGATCAGTCTGTTCTATGAGC................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................AT--------------------------------------------------GCCTAGATCCGTCAATTAGT..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GTGGT-------TGGTTTAGTTCTAGG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ATTACGTAGTAGCA--------------------ATGT--AT--------------------------------------------------G.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------GCCTAGATCCGTCAATTAGC..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTCTGTTCTATGAGCAT..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TATTATTCAGACA----------------------AGTTTTTAAA--CG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AATA--GTGGT-------TGGTTTAGTTCT..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAATATAAACCTTCCTT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TAGTAGCA--------------------ATGT--AT--------------------------------------------------GCCTAGATCCGTC.................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTGTTCTATGAGCAAT.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGGTACCGCTGATCAGT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TACGCACATCATAAATTGA----------------------CGTTCGTGAAAACGCTCA-TAGTAATTAATCT-------T---AC---------ATTTATTTTTCAGATTGTTACATCAAACTATATATTCT-----ATT----------------------------------TTAGTAAACGTATTATT------------------------------------GGAAACTTTTGATGAAGTTTAACCTACTT---AATTAGAC-AATCAATTT---------------------------CAGGATTTACTTTGAAATTT--TT--------------------------------------------------TCCAAGATCCGACAATTATCGATCGAAGTTTCCA--TT-----GGATAC-ATAA--GTGGATTATTCGCGGTCTGGTTCCAGGTACCGCCGATCAATTGGTTCTTTGAGAAAT--TAACCTTCCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................TTATTTTTCAGATTGTTACAT...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.....................................................................................C---------ATTTATTTTTCAGATTGT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..................................................................................................................................................................................GTAAACGTATTATT------------------------------------GGAAAA...............................................................................................................................................................................................................................................................................2011.0011000000
....................................................................................AC---------ATTTATTTTTCAGATTGTTACA....................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A--TT-----GGATAC-ATAA--GTGGATTAT.............................................................2211.0010000100
droYak3
GGAAGATATTGTTTAGAC-------------GGCAAATTGACATTCGTCGAAACACTCA-AGATAATAAATCG-------T---ACACTTAAATCATTTATTTTTCAAACTGTTACATTAGACGATATAATCT-----ATT----------------------------------TTACTTAATT---------------------------------------------AAACTCTTGATCGAGTTTAACCA----TCAATTTAGAC-AATCAATTTGTTCTAATAATTATGTGGTAGCAATTTCATTATTTACTTTGAAGTGT--AC--------------------------------------------------GCCAAGATCCGACAATTATCGGTAAAAGTTTCCA--GT-----GGTTAC-ATTA--ATGGCTTATTCGCGGTCTAG-TCCAGGTACCGCTGATCTATTGGTTCTATGAACAAT------TAACCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............TAGAC-------------GGCAAATTGACATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
....................................................ACACTCA-AGATAATAAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010000000
.........................................CATTCGTCGAAACACTCA-AGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110000000000
...............................GGCAAATTGACATTCGTCGAAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.....................................................CACTCA-AGATAATAAATCG-------T---.....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000010000
.......................................................CTCA-AGATAATAAATCG-------T---ACACT................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100100000000
....................................................................................................................................T-----ATT----------------------------------TTACTTAATT---------------------------------------------AAACTCTTGATC.......................................................................................................................................................................................................................................................................2620.50101000000000
.....................................................................................................................................................................................................................................................................................................................ATTTACTTTGAAGTGT--AC--------------------------------------------------GCC...........................................................................................................................2120.50101000000000
..........GTTTAGAC-------------GGCAAATTGACATTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000010000
................AC-------------GGCAAATTGACATTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000
droEug1
GGATAATAGTATTTAGAAA-----------CGACAAA-CAACT-TCTTCGATTTATTTGTATATA----ATCT-------TGCGATACTCAAGTCCATTACATTTCAAATAAGTATATCAAAATAGATATTCA-----TTT----------------------------------TTATTGAACTACTAAACGTTTACACACTAATAACTTGATCGGCTGCTATTAAGGG--GC--TTAAGAAGGTTTACATGA----------------------CTTT--------------TTCCTTA-----------------------------------AATAAGGGATATTGGTCATAAAAGTTGATCTAGGCTAT---------------------TTTTTTTAG-TTTTTTCA--GT-----GGAAACTATTT--TTGTTTTATTGGCGGTACTGGTCCAGGTACCACGGATTCGTT--------GAGAAAT--ATTCCACCTTCSizeHit CountTotal NormTotal
No Reads
droBia1
GAAAAATAATCTGCAATCCAATGTGCCTTTTTGGAAAACAAAGTTTTTAAA--TA-----TC-------GTATTCAAGTTT---AAATCGAAATCATTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-----------------------------------------------------------TTCTTTAATTCTTGGAAATAACTCATGGAATCCAGTGT-------------------TTTATGAA--------------------TAGT-TTCAGTATGTTTTATTAACCGCCTTG-GACAGGTACCGCGGATTAGCTG---------------------TCCCTCSizeHit CountTotal NormTotal
No Reads
droTak1
AAATGACACTAAACACTT--------------------------T-------TTACTT-----------------------------------------------------GTTCTAACAA----TATTA-----------GAATATATATTTTAGTGATCGTGATATATTTTTT-----------------------------------------------------AAAAATTTTT-----TGCTTAA--TATTC---GCTGAAAA-ACTTAATTC---------------------------CAAGATTTATGGCATGATTTATTGACCGTAATGTAACTTTTATTAGTGGAAAAAACGAATCCAGCCAAGCGTTCCTTTGGATTTTA-------------------CCATTTTTTCGGGGTAGA-ATTA--GTGATTTATTAGCGGTAC---TGTAGGTAGCGCGGATTAGCC-----------------GTTCCATCTTCSizeHit CountTotal NormTotal
No Reads
droEle1
AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCA--GT-----GGAAAT-----------TTTATAAGCGTTCTCGATCCAGGTATCGCGGATTAGAC-----------------GACCCATCCGCSizeHit CountTotal NormTotal
No Reads
droRho1
TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTAGCGGTCTTCATACAGGTACCCCTGT------------------AAGACGTCTCATCCTCSizeHit CountTotal NormTotal
No Reads
droFic1
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCTAGGTTCAGGTACTCTGGACTGTTTTGTCTC-T----AAGTTTTCCTACCCTCSizeHit CountTotal NormTotal
No Reads
droKik1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGSizeHit CountTotal NormTotal
No Reads
droBip1
TATTACTTGTATCTT----------CTATTCTGGAGGACAACATTGGTAG----------------------------------------------TCCACTTGCG---------------------------------------------------------------------TT-CCA------------------------------------------------------------------AGGCCA----CGAACCTAATAAATCCAATCTGGTCTGGTA-------------------------------------CCCGGCTAGTATCTCGTACTTTACCCTTGGGAAGACTACAC---------------CCAAAGTGCCTGGCTTATTGCTGATATTCCCGT--CT-----GGCGGG-GTTT--CATTATGATTAGCGATAA-TTCCCAGGTACAGAGGATTATCCC----------------ATACCTCCCGASizeHit CountTotal NormTotal
No Reads
droGri2
TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:11 PM