ID:

dsi_25446

 Coordinate:

3r:1398034-1398291 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.3 -3.0

Flybase annnotation

exon [3r_1398292_1398625_+]; CDS [3r_1398292_1398625_+]; CDS [3r_1395182_1398033_+]; exon [3r_1394963_1398033_+]; intron [3r_1398034_1398291_+]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
DNAREP1_DMRCHelitron+
mature
  1. 2r:1176281-1176306 +
  2. 2r:14152240-14152265 +
  3. 3l:22370329-22370354 +
  4. 3l:23347943-23347968 +
  5. dsi_16789  3r:2492-2517 +
  6. 3r:7076298-7076323 +
  7. 3r:7157771-7157796 +
  8. 4:158365-158390 +
  9. x:10292236-10292261 +
  10. x:20189123-20189148 +
  11. x:20419500-20419525 +
  12. node_67530:164-189 +
  13. node_42489:108-133 +
  14. node_32110:13-38 +
  15. node_13055:6253-6278 +
  16. node_52714:13-38 +
  17. node_32628:1518-1543 +
  18. node_20993:114-139 +
  19. node_48968:210-235 +
  20. node_119337:36-61 +
  21. 2l:21645894-21645919 -
  22. 2l:22270618-22270643 -
  23. 2l:23064376-23064401 -
  24. 2r:829969-829994 -
  25. 2r:2336652-2336677 -
  26. 2r:2371074-2371099 -
  27. 2r:2410490-2410515 -
  28. 2r:4636093-4636118 -
  29. 3l:23413431-23413456 -
  30. 4:691005-691030 -
  31. 4:766184-766209 -
  32. x:19391959-19391984 -
  33. x:19557237-19557262 -
  34. x:20501422-20501447 -
  35. node_28136:9344-9369 -
  36. node_118041:1562-1587 -
  37. node_116834:613-638 -
  38. node_32525:98-123 -
  39. node_2983:9912-9937 -
  40. node_98082:319-344 -
  41. 2l:19685597-19685622 +
  42. 2l:20370267-20370292 +
  43. 2l:21350266-21350291 +
  44. 2l:22340306-22340331 +
  45. 2r:683310-683335 +
  46. 2r:933922-933947 +
  47. 3l:23146373-23146398 +
  48. 3l:23311371-23311396 +
  49. dsi_25446  3r:1398160-1398185 +
  50. 3r:27131643-27131668 +
  51. x:19596261-19596286 +
  52. x:20581915-20581940 +
  53. node_13788:4414-4439 +
  54. node_89031:7761-7786 +
  55. node_109912:140-165 +
  56. node_4721:2632-2657 +
  57. node_12893:6067-6092 +
  58. node_47470:6064-6089 +
  59. 2l:20809188-20809213 -
  60. 2l:21142373-21142398 -
  61. 2l:22071371-22071396 -
  62. 2l:23050257-23050282 -
  63. 2r:81471-81496 -
  64. 2r:1894512-1894537 -
  65. 3l:22194033-22194058 -
  66. 3l:23259553-23259578 -
  67. 3l:23377413-23377438 -
  68. 3r:27091992-27092017 -
  69. 4:287249-287274 -
  70. x:11661218-11661243 -
  71. x:19894039-19894064 -
  72. node_32789:60-85 -
  73. 2r:728363-728388 +
  74. 2r:1372767-1372792 +
star
  1. 2r:2432086-2432112 +
  2. 3l:22701086-22701112 +
  3. dsi_25446  3r:1398207-1398233 +
  4. node_4230:5375-5401 -
  5. node_22868:5671-5697 +

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAGCTCTACTTCAGGCTTCAGCCCTTGTCAGTTATGAGAGTGGAAATTTTGGTAGAGCCCACTTATTGTGAATCTGAGTTTCTTAATTATACCCGTTACTCGTAGAGTAAAAGCCATGTCCGTCTGTCCGTATGAACGTCGAACTTTTTCCCACACCCACTATACTCGACTATAGCATTCTCTCTTGATTAATATGTAATTTCCTTTCCGGTTTATCGAATGCTAACAATAACTTTTTCCATCCATAGCTCTGCCTACGATCTGAATGTTGGTGGCCCCTTGACCCGATCGAAGTCTG
********************************************************************************************************************************************************************************.....(((.......(((...(((((.......................))))).....)))........))).************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 M053
female body
 M024
male body		 SRR902009
testis
 M023
head
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTCGA............................................................................................................................................................ 26 0 20 6.90 138 102 34 0 0 0 0 0 0 2 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 27 0 17 3.71 63 20 19 7 8 0 1 8 0 0 0 0 0
..................................................................................................................................................................................TCCGTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 25 0 17 2.59 44 0 0 0 0 44 0 0 0 0 0 0 0
..............................................................................................................................................................................CATGTCCGTCTGTGCGTATGAACGTC.............................................................................................................................................................. 26 1 20 1.60 32 0 9 14 9 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................GATCTGAATGTTGGT......................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TCTGAATGTTGGTGGCCCCTTGACC............. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................ATGTTGGTGGCCCCTTGACCC............ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TCTGAATGTTGGTGGCCCCTTGACCCGA.......... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................ACGACTAGAGCATTCTCTCTTGATTA........................................................................................................... 26 2 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0
..............................................GAAGGTAAGAACAGGAGCTC.................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................CTCATTCAGGCTTCTGCC................................................................................................................................................................................................................................................................................... 18 3 20 0.70 14 0 0 0 0 0 0 0 0 14 0 0 0
................................................................................................................................................................................................................................CTCGACTATAGCCTTCTCTCTTGATT............................................................................................................ 26 1 9 0.67 6 0 0 2 4 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCCGTCTGTCCGTATGAACGTCGA............................................................................................................................................................ 24 0 20 0.65 13 10 0 0 0 0 3 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACTCGACTATAGCATTCTCTCTTGATT............................................................................................................ 27 0 5 0.60 3 0 0 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACTATAGCATTCTCT................................................................................................................... 16 0 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTC.............................................................................................................................................................. 24 0 20 0.50 10 0 9 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................ACTCGACTATAGCCTTCTCTCTTGATT............................................................................................................ 27 1 7 0.43 3 0 0 1 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTCCGTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 26 0 17 0.41 7 3 1 1 0 0 1 1 0 0 0 0 0
................................................................................................................................................................................................................................CTCGACTATAGCATTCTCTCTTGATT............................................................................................................ 26 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCGACTATAGCATTCTCTCTTGATT............................................................................................................ 25 0 8 0.38 3 0 0 2 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................GTCCGTCTGTCCGTATGAACGTCGA............................................................................................................................................................ 25 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0 0
...................................GGTCGCCATAAGAAGGTA................................................................................................................................................................................................................................................................................................................. 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTATACCCGTTACCCGTAGAGTAAAAGC........................................................................................................................................................................................ 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TGTCCGTATGAACGTCGAAATTTATT.................................................................................................................................................... 26 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TCTGTCCGTATGAACGTCGA............................................................................................................................................................ 20 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGCCGAA........................................................................................................................................................... 27 1 20 0.30 6 0 2 2 0 0 0 2 0 0 0 0 0
............................................................................................................................................................................GCCATGTCCGTCTGTCCGTATGAACGT............................................................................................................................................................... 27 0 20 0.25 5 0 3 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTACGTATGAACGTCGA............................................................................................................................................................ 26 1 20 0.25 5 0 0 3 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TACTCGACTATAGCATTCTCTCTT................................................................................................................ 24 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................TGTCCGTATGAACGTCGAA........................................................................................................................................................... 19 0 20 0.20 4 0 0 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCCGTCTGTCCGTATGAACGT............................................................................................................................................................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGT............................................................................................................................................................... 23 0 20 0.20 4 0 0 0 2 0 2 0 0 0 0 0 0
...............CAAGAGTTTGAGTCCAGT..................................................................................................................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGCCATGTCCGTCTGTCCGTATGAA.................................................................................................................................................................. 25 0 20 0.20 4 1 0 2 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TTAATTATACCCGATACTCGTAGAGT.............................................................................................................................................................................................. 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................CTCCTTCAGGCTTCTGCC................................................................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................TTGGTAGAGCGCACT........................................................................................................................................................................................................................................... 15 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TACGTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 25 1 20 0.15 3 0 0 0 0 0 0 0 3 0 0 0 0
....................................................................................................................................................................................CGTCTGTCCGTATGAAC................................................................................................................................................................. 17 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CATGTCCGTCTGTCCGTATGAACGCCGAA........................................................................................................................................................... 29 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................ACTCGACTATAGCATTCTCTCTTGAT............................................................................................................. 26 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTCGACTATAGCATTCTCTCTTGAT............................................................................................................. 25 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CGTCTGTCCGTATGAACGTCGACTTT........................................................................................................................................................ 26 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCCATGTCCGTCTGTCCGTATGAA.................................................................................................................................................................. 24 0 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACTCGACTATAGCCTTCTCTCTTGAT............................................................................................................. 26 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATGTCCGTCTGTCCGTATGAAC................................................................................................................................................................. 22 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCCATGTCCGTCTGTCCGTATGAAC................................................................................................................................................................. 25 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CTGTCCGTATGAACGTCGAA........................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAA.................................................................................................................................................................. 20 0 20 0.10 2 0 0 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................GTCTGTCCGTATGAACGTCGA............................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCCATGTCCGTCTGTGCGTATGAACGTC.............................................................................................................................................................. 28 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CGTCTGTCCGTATGAACG................................................................................................................................................................ 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGAATGCTCGTCGAACTTTT...................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................GACTATGGCATTCTCTCTTGAAAA........................................................................................................... 24 3 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................TCGACTATAGCATTCTCTCTTGA.............................................................................................................. 23 0 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTCTGTCCGTATGAACGTCGACTAT........................................................................................................................................................ 25 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CACGACTAGAGCATTCTCTCTTGA.............................................................................................................. 24 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................GCCCTTGATCTGATCGAAGT... 20 3 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................GAGTGGAAATTTCGGT..................................................................................................................................................................................................................................................... 16 1 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTCGAAT.......................................................................................................................................................... 28 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTCGAAG.......................................................................................................................................................... 28 1 18 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCATATGAACGTCGAA........................................................................................................................................................... 27 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCGGTATGAACGTCGAA........................................................................................................................................................... 27 1 19 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTCCGTCTGTCCGTA...................................................................................................................................................................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCCGTCTGTCCGTATGAACGTCGC............................................................................................................................................................ 24 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCGACTATAGCATTCTCTCT................................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................TATACCCGTTACTCGTAGAGTAAAAG......................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTAAAA........................................................................................................................................................... 27 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAAC................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TCTGTCCGTATGAACG................................................................................................................................................................ 16 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................CTGGCCGTATGAACGTCGAAT.......................................................................................................................................................... 21 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGACCGTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCATCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CCCAGTAAGTGTGAATCT............................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCATGTCCGTCTGTACGTATGAACGTCGA............................................................................................................................................................ 29 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCCGTCCGTATGAACGTCGAAT.......................................................................................................................................................... 28 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CATGTCCGTCTGTCCGTATGA................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TATACCCGTTACTCGTAGAGT.............................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TCTGTCCGTATGAACGTCGATC.......................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACTATAGCATTCTCTCTT................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTCGC............................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................ATGTCCGTCTGTCCGTATGA................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................TTATACCCGTTACTCGTAGAGTAAAA.......................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCCATGTCCGTCTGTCCGT....................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................TGTCCGACTGTCCGTATGATCGTCGAA........................................................................................................................................................... 27 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGCCCGTCTGTCCGTATGAACGTCGAA........................................................................................................................................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATGTCCGTCTGTGCGTATGAACG................................................................................................................................................................ 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCATGTCCGTCTGTGCGTATGAACGTC.............................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATGTCCGTCTGTCCGTATGAACGTCGA............................................................................................................................................................ 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACTCGACTATAGCATTCTCTCTTGGT............................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................TGTCCGTCTGTCCGTATGAACGTCG............................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GTCCGTATGAACGTCGAA........................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTCTTCTCGGCCGCGGTTCTCTACCTCAGGTCACACCGGCGGTACTCTTCCATTCTTGTCCTCGAGATGAAGTCCGAAGTCGGGAACAGTCAATACTCTCACCTTTAAAACCATCTCGGGTGAATAACACTTAGACTCAAAGAATTAATATGGGCAATGAGCATCTCATTTTCGGTACAGGCAGACAGGCATACTTGCAGCTTGAAAAAGGGTGTGGGTGATATGAGCTGATATCGTAAGAGAGAACTAATTATACATTAAAGGAAAGGCCAAATAGCTTACGATTGTTATTGAAAAAGGTAGGTATCGAGACGGATGCTAGACTTACAACCACCGGGGAACTGGGCTAGCTTCAGAC
************************************************************************************************************.....(((.......(((...(((((.......................))))).....)))........))).******************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M023
head
 M025
embryo
 M024
male body		 M053
female body
..........................................................................................................................................................................TTCGGTACAGGCAGACACGCAT...................................................................................................................................................................... 22 1 2 6.00 12 12 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GTCGGATGCTAGACTT................................ 16 1 4 5.25 21 0 21 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................TCGGATGCTAGACTT................................ 15 1 9 3.67 33 0 33 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 23 0 2 2.00 4 1 0 2 0 1 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 22 0 2 1.50 3 0 0 0 1 0 0 1 0 1 0 0
..........................................................................................................................................................................TTTGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 22 1 2 1.50 3 1 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................CGTCGGATGCTAGACTT................................ 17 2 17 1.29 22 0 22 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CGGATGCTAGACTTG............................... 15 1 8 1.13 9 0 8 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ATTCACGGTACAGGCAGACAGGCATACT................................................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........CGCGGTTCTCTACCTCAGGTC...................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAGACAGGCATACTT.................................................................................................................................................................. 27 0 2 1.00 2 0 0 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TCATTATCGGTACAGGCAGACACGCAT...................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAGACACGCAT...................................................................................................................................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGGGTGTGGCTGATATG..................................................................................................................................... 17 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CTTCTTGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAGGGAGTGGGTGGTAGGAGCT................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAGACAGGCATAC.................................................................................................................................................................... 25 0 2 1.00 2 0 0 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTTGGTACAGGCAGACAGGCATACT................................................................................................................................................................... 26 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CATACTAGCAGCCTGAAAAA..................................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................TTTTTGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAGGCATGCTCTCAGCTTGA......................................................................................................................................................... 20 3 4 0.75 3 0 0 0 0 0 0 0 1 0 2 0
........................................................................................................................................................................TTATCGGTACAGGCAGACACGCAT...................................................................................................................................................................... 24 2 7 0.71 5 5 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CGGTACAGGCAGACAGGCATACTT.................................................................................................................................................................. 24 0 20 0.55 11 7 0 0 0 1 0 3 0 0 0 0
.........................................................................................................................................................................TTTCCGTACAGGCAGACAGGCATTC.................................................................................................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAGACAGGCATACTT.................................................................................................................................................................. 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGTCAGACAGGCAAAT.................................................................................................................................................................... 25 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAGACAGGCATACTTGC................................................................................................................................................................ 28 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTAGGTACAGGAAGACAGGCATACT................................................................................................................................................................... 26 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................TTTTCGTTACAGGCAGACAGGCAAAT.................................................................................................................................................................... 26 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTAGGTACAGGCAGACAGGTAT...................................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAGACACGCATACT................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAGACAGGCATA..................................................................................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAGACAGGCATACT................................................................................................................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................AGACAGGCATACTTGCAGCTTTGATA...................................................................................................................................................... 26 3 7 0.43 3 0 1 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GTCGGATGCTAGACT................................. 15 1 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GAGCTGATATCGTAAGAGAGAACTAA............................................................................................................ 26 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTATCGGTACAGGCAGACAGGCATACTT.................................................................................................................................................................. 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................GGAATAGTCAAGACTCTC.................................................................................................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................AGGGAGGTTTCGAGAGGGAT......................................... 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................CAGGGATACTAGCAGCCTGA......................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................TTAGGTACAGGCAGACACGCAT...................................................................................................................................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTCGGTACAGGCAAAGAGGC........................................................................................................................................................................ 21 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAGACAGGCGTA..................................................................................................................................................................... 23 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTTGGTACAGGCTGACAGGCAT...................................................................................................................................................................... 23 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAGGCATACTCTGAGCTTG.......................................................................................................................................................... 19 3 10 0.30 3 0 0 0 0 0 0 0 2 1 0 0
............................................................................................................................................................................CGGTACAGGCAGACAGGCATACTTGC................................................................................................................................................................ 26 0 20 0.30 6 0 0 6 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTAAGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 23 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................AATTATCGGTACAGGCAGACAGGAAT...................................................................................................................................................................... 26 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................GGCATACTAGCAGCTTG.......................................................................................................................................................... 17 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTAAAGGCAGACAGGCATACT................................................................................................................................................................... 25 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................CAGGCATACTCTGAGCTTGA......................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................TTCAGTACAGGCAGACACGCAT...................................................................................................................................................................... 22 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTACGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CGGTACAGGCAGACAGGCATACT................................................................................................................................................................... 23 0 20 0.25 5 0 1 0 0 0 0 4 0 0 0 0
..................................................................................................................................................................................AGGCAGACAGGCATACTTGCAGCTT........................................................................................................................................................... 25 0 17 0.24 4 0 2 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAAACAGGCAT...................................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CGGTACAGGCAGACAGGCATACTTGCA............................................................................................................................................................... 27 0 20 0.20 4 0 1 0 0 3 0 0 0 0 0 0
..............................................................................................................................................................................GTACAGGCAGACAGGCATACTTGCAGCT............................................................................................................................................................ 28 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGAGCTGATATCGTAAGAGAGAACTAA............................................................................................................ 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AATTAATATGGGAAATGAGCATCTCATTT........................................................................................................................................................................................... 29 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAATGAGCTGATATCGT......................................................................................................................... 17 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................TATACGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTGGAGATTGAAACAGGGT................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................ACAGGCAGACAGGCATACTTGCAGCT............................................................................................................................................................ 26 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTAGGTCCAGGCAGACAGGC........................................................................................................................................................................ 20 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTATAGGCAGACAGGCATACTT.................................................................................................................................................................. 26 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................TTATCGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................ATTCGGTACAGGCAGACACGCAT...................................................................................................................................................................... 23 2 13 0.15 2 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................AGGCATACTTGCAGCTT........................................................................................................................................................... 17 0 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0
..................................................................................................................................................................................AGGCAGACAGGCATACTTGCAGC............................................................................................................................................................. 23 0 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGCACCTTGGAAAAGGGTGA............................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................AATTAATATGGGCAATGAGCAGCT................................................................................................................................................................................................ 24 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ACAGGCATACTTGCAGCTTTGATA...................................................................................................................................................... 24 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................CAGGCATGCTCTCAGCTTG.......................................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................ACAGGCAGACAGGCATACTTGCAGCTT........................................................................................................................................................... 27 0 17 0.12 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TACGGTACAGGCAGACACGCAT...................................................................................................................................................................... 22 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................GATCGTTTTTGAAAAAGGT......................................................... 19 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTATCGGTACAGGCAGACAGGAAT...................................................................................................................................................................... 24 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CAGGCAGACAGGCATACTTG................................................................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0
.................................................................................................................................................................................CAGGCAGACAGGCATACTTGCAGC............................................................................................................................................................. 24 0 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................TTATCGGTACAGGCAAACAGGCAT...................................................................................................................................................................... 24 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................TTATCGGTACATGCAGACAGGCAT...................................................................................................................................................................... 24 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................GGTACAGGCAGACAGGCATACTTGCAG.............................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ACAGGCAGACAGGCATACTTGCAGC............................................................................................................................................................. 25 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................................................TTAATATGGGCAATGAGCAT.................................................................................................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0
................................................................................................................................................TTAATATGGGCAATGAGCATCTCAT............................................................................................................................................................................................. 25 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................ATGCTAGACGTACAAC........................... 16 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGTGCTGATCTCGTAAGAGAGAACTA............................................................................................................. 26 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................ACTTGCAGCCTGACAAA..................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGTCAGACAGGCAAAT.................................................................................................................................................................... 24 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTCGGTACAGGCAGACAGACAT...................................................................................................................................................................... 22 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
................................................................GGATGAAGTCCCAACTCGG................................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAGTAATATGGGCAATGAGCATCTCATT............................................................................................................................................................................................ 28 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTTTGTACAGGCAGACAGACAT...................................................................................................................................................................... 23 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
...........................AGGTCCCACCAGCGATACT........................................................................................................................................................................................................................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................ATACTCTCAACTTTA........................................................................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................ATACTAGCAGCCTGACAAA..................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................TATGGTACAGGCAGACAGGCATACT................................................................................................................................................................... 25 2 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CGTAAGAGAGAACTA............................................................................................................. 15 0 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................TATGGTGCAGGCAGACAGGCATACT................................................................................................................................................................... 25 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CAGGCAGACAGGCATACTTACAGCTT........................................................................................................................................................... 26 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................AGGTCTCACCGGCGG............................................................................................................................................................................................................................................................................................................................ 15 1 19 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TCGGTACAGGCAGACACGCATAC.................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TACAGGCAGACAGGCATACTTGC................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TCGGTACAGGCAGACAGG......................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CAGGCAGACAGGCATACTTGCAGCT............................................................................................................................................................ 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.......CGGCCTTGGTTCTCTA............................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TCAGTACAGGCAGACACGCAT...................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTGGTACAGGCAGACAGGCAT...................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TCGGTACAGGCAGACACGCAT...................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGTACAGGCAGACAGGCATACT................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................TCGGTACAGGCAGACAGGCATAC.................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TACAGGCAGACAGGCATACTTGCAGC............................................................................................................................................................. 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGAAACAGGGTGTTGGGGA......................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AGACAGGCATACTTGCAGCTT........................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GGCATACTTGCAGCTT........................................................................................................................................................... 16 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................GGTACAGGCAGACAGGCATACTT.................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................TCGGTACAGGCAGACAGGCATACTT.................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TATGGTACAGGCAGACAGGCGTA..................................................................................................................................................................... 23 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CGGTACAGGCAGACACGCAT...................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1397984-1398341 + dsi_25446 GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAGC----------------------------------------------------------TCTACTTCAGGCTTCAGCCCTTGTCA-------------------------------------------------------------------GTTATGAGA--GTGGAAATTTTGGTAGAGCCCACTTATTGTGAATCTGAGTTTCTTAATTATACCCGTTACTCGTAGAGTAAA--------------AGCCATGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTT-----TCCCACACCCACTATACTCGACTATAG----------CATTCTCTCTTGATT--------AATATGTAATTT-----CCTTTCCGGTTTATCGAATGCTAACAATAACTTTTTCCATCCATAGCTCTGCCTACGATCTGAAT---------GTTGGTGGCCCCTTGACCCGATCGAAGTCTG
droSec2 scaffold_6:1616878-1617051 + GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAGC----------------------------------------------------------TCTACTTCAGGCTTCAGCCCTTGGCA-------------------------------------------------------------------GTTATGAGT--GTGGAATTTTTGGTAGAGCCCACTTATTGTGAATCTGAGTTTCTTAATTATACCCGTTACTCGTAGAGTAAA--------------AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:1502233-1502405 + GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAAC----------------------------------------------------------TCTACTTCAGGCTTCATTGCCGAGCA-------------------------------------------------------------------ATTATCAGT--GTGTTAATTTTGGTAGAGCCTAATGATTGTGAATCAGATATTCCTAATTATACCCGTTACTCGCAGAGTAAA--------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droEre2 scaffold_4770:1776228-1776569 + GAGAAGAGTCGGCGCCAAGAGATGGAGTCCAGTGTGACCGCTATGAGAAAGTAAGACCC----------------TATAAAGAATATACATG------------------------------------------------------------------------------------------------------------CTG----G----ATCACT-------AGCCTA--T---TC----------------------------GA-----------------------------------------CCTGGTCTGTCTGTTTGTCCGTATGAGT---CCGTCGAGTTCACAGAAGCTTATTAGTTTATAGGGACG--------------------------------------------------------------------------------CGCTT-------------------GATTTGATA------ATTTGAT-----TCTTTT-----TTTTATTTG------CCTTGCCAATTG----------GCTTCTGTCTTG-----TTTTTTAATATGTAATTTGCTAGGCTTTTCGGCTTAATGAATATTAACTATAAGCTTTTCCATCCATAGCTCTGCCTATGATCTGAAT---------GTTGGTGGGCCCCTAACCCGATCGAAGTCTG
droYak3 2R:9740625-9740799 - CTTCAATCC-------------------------------------------------------------------------------------------------------------------------------------TTGTCGAAGGTAAAAACGTTTCCAAAT---------------------------------------------CAAT-------AACGGG--TTTTAA----------------------------TATTTATTATACCCGTTACTCGTAGAGTAAA--------------AGG---------------GT----ATACTAGGCTCGTTGAAAAG-----------------------------------------------TATT----------------------------------------------------------------------------------------------TAACTTTTAACTTTTTATT-TCTTATAGTCGGGGAACTCGACTATAG----------CATTC--------------------------------------------------------------------------------------------------------------------------------TTTCTTGCTTAA
droEug1 scf7180000409766:472040-472372 + GAGAAGATCCGCCGTCAGGAGATGGAGACCAGTGTGGCAGCTATGAGAAGGTAAGGAT------GCACTTAACTATTTAAGGGCCAAACAAT------------------------------------------------------------------------------------------------------------CTT----A----ATAACT--TA--AAATAG---------------------------------------------------------------------------------------------------------------------------TAAATACTTCTTAATGTTTAGGAAAATGGTTTTTAGTTTGTTAATTTTATTATT----------------------------------------------------------------------------------------------TTATTTTTATTTTTTAAATGGTTTTTAGTTTGTTAATTTTATTATTT----------TATTTTATTTTTTAT--------AATTTTTAATTTGTTTGACTTTCCGGTTAGACGAATGCTAACACTAAGCTTTTCCGCCCATAGCTCTGCCTACGATTTGAAT---------ATGGGTGGATCCGTGGCCCGTTCCAAGTCCG
droBia1 scf7180000302155:3255906-3256216 - GAGAAGAGCCGGCGTCAAGAGATGGAGACCAGTGTGGCAGCCATGAGAAGGTAAGGA-----GTGC------------------TAAACAAGCCATTTCGAATCGTAGTTATTCAAGATATTTCTATTTTAAGCT--G----------------------------------------------GT-----------------TTTAG----TTTGCTTTTAAA--GTAGT--CA-CAA----------------------------AGAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGAAAGA-AAGTCACAAAGGTTTAATTTTGTAAAAGCTTTT------------------------------T-------------TT------------------------AA----TTTTGT---------------TTAATTTGTTTGGTTTTCCGGTTAGACGTATGCTAACTCACAGCTTTTCCGTTCCTAGCTCTGCCTACGATCTGAAT---------GTCGGTGGGCCCTTAACCCGTTCCAAGTCTG
droTak1 scf7180000415754:267664-268012 - GAGAAGAGCCGGCGCCAGGAGATGGAGACCAGTGTGGCAGCCATGAGAAGGTAAGGA-----GTGC------------------TG--------------AAACATAGCTA-----GA-------------------------------------TAATTTTTCCAAGT-AATTTTTTAAATTTCT-----------------TTTACTTGCTTTGCTTACAAAAAGCT--------AA----------------------------AGATACTA----------TTTATATACTATTCATTAATATTATC---------------------------------------------------------------------------------------------------------------------------------------CTGGAAGGACAAGTTA-AAACGTATAATTTT---AGAGCCTTTGTCATAATA---TTACTTTAAACACCTTTTT-TTTT--------------------------------ACATTT---------------------------TTGCTTTCGCATTCCGGTTAGACGAATGCTAACACATAGCTTTTCCGTCCATAGCTCTGTCTACGATCTGAAT---------GTGGGTGGGCCCTTAACCCGTTCCAAGTCCG
droEle1 scf7180000491278:159639-160004 + GAGAAGAGCCGGCGCCAAGAAATGGAGACCAGCGTGGCAGCCATGAGAAGGTAAGAAA------GTATTTAATTAT-------------------------------------------------------------------ATATATAATTAAATATATATTTGAAAT-----------TTTCGAAAGCTTGTAAAAGTCG----G----ATAAAA-------AGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTTAAATTTATTTTATTACTGTCTGTACCAGTGAGGTAATAAACAAGTACAACAGTAAAAAAA-AAACAATA-------------------GATTTGGTC------A-----CTTTAAAT---------------AATCCATTAATTTTTTTATTTTTTGTTTTTACACTT----------------------TT--TTTTGTTTGGCTTTCTGGTTAGACGAATGCTAACGAATAGCTTTTTTGCCCACAGCTCTGCCTACGATCTGAAT---------GTGGGTGGCACCTTGACCCGCTCCAAGTCCA
droRho1 scf7180000780094:16106-16200 - CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGGTTAAACGACTGCTAAAAACTAGCTTTTTCGCCCATAGCTCTGCCTATGACCTGAAT---------GTGGGTGGCGTCCTGACACGTTCCAAGTCCA
droFic1 scf7180000453850:908824-909183 + GAGAAGAGCCGGCGCCAGGAGATGGAGTCCAGTGTGGCAGCCATGAGAAGGTAGGAAC------GC------------------TTACCCCTTTATTTCT--TTGTAGT---------------------------------------------------------------------------GT-----------------TTTTG----TTTACT--TA--AAGTTGT--TTTTAA----------------------------TGCATGTTGTTT--TTTTTTGGTAGAATCGG--------------TGT---------------GT----ATCAAACGTTGTGTTCAAATT----------------------------------AATTAATTAAATTAAT----------------------------------------------------------------------------------------------TTATTAATATTTTTTATTTTATTTTTTTTTTATTTTTTTTATTTT--------------TTTTATTTTTTTTTTTTTTTAATTATGTTTTTTGTTTGGC-CTCTGGTTAGACGACTGCTAACACATAGCTTTTCCGCTTATAGCTCTGCATACGATCTGAAT---------GTGGGCGGCGCCTTGACCCGTTCCAAGTCGG
droKik1 scf7180000302247:550753-550840 + TACCAAATG------------ATTAATTTCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTTTACACCTAGCTCTGTCTACGATATGAATATG------GTGGGTGGTGCCCTGACCCGCTCCAAGTCTA
droAna3 scaffold_13340:18590458-18590551 - GATTATTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTTTTTTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATTTGTTATTATTTAGCTCTGCCTACGATCTAAAC---------TTGGGCGCCACCATGACCCGCTCCCGCTCCA
droBip1 scf7180000395652:577818-577885 + AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTTTTTTTAGCTCTGCTTACGATCTGAAC---------ATGGGCAGCACCATGACCCGCTCCAGGTCCA
dp5 2:17340346-17340423 + GAGAGGACCAAGCGCCTGGAAATGGAGACCAGTGTGGCGACCATGAAGAGGTATGACTCGGAGT-------------------------------------------------------------------GCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCTTG
droPer2 scaffold_0:11185018-11185095 + GAGAAGACCAAGCGCCTGGAAATGGAGACCAGTGTGGCGGCCATGAAGAGGTATGACTCGGAGT-------------------------------------------------------------------GCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCTTG
droWil2 scf2_1100000004943:8927590-8927682 - GAGAAGACCAAACGCATGGCAATGGAGCAAAGTGTGGCTGCTCTACGCAGGTATGCACTGAATC-------------------------------------------------------------------AAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCT---------TTGGTTGTCACTTATAAA------------A
droVir3 scaffold_13047:6518148-6518202 + GAGAAGAGCAAGCGGCTTGAAATGGAGTCCAGTGTGGCTGCAATGAGAAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:1556052-1556141 - GTTTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTCACTACCTTATCTACAGCTCCACTTATGAGTTGGGCGTTGCAGTCGTTGGCGGTACGTTGACGCGTTCGAAGTCAA
droGri2 scaffold_14906:11821793-11821847 + GAGAAGGGCAAGCGTCTCGAAATGGAGTCCAGTGTGGCAGCAATGAGAAGGTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAGC----------------------------------------------------------TCTACTTCAGGCTTCAGCCCTTGTCA-------------------------------------------------------------------GTTATGAGA--GTGGAAATTTTGGTAGAGCCCACTTATTGTGAATCTGAGTTTCTTAATTATACCCGTTACTCGTAGAGTAAA--------------AGCCATGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTT-----TCCCACACCCACTATACTCGACTATAG----------CATTCTCTCTTGATT--------AATATGTAATTT-----CCTTTCCGGTTTATCGAATGCTAACAATAACTTTTTCCATCCATAGCTCTGCCTACGATCTGAAT---------GTTGGTGGCCCCTTGACCCGATCGAAGTCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................26206.9013800020000034102000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................27173.71630010007881920000000
...............................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................25172.5944000044000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAT---------GTTGGT.........................1511.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAT---------GTTGGTGGCCCCTTGACC.............2511.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------GTTGGTGGCCCCTTGACCC............2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAT---------GTTGGTGGCCCCTTGACCCGA..........2811.00100000000000010000
..............................................GAAGGTAAGAACAGGAGC----------------------------------------------------------TC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................24200.6513003000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAG----------CATTCTCTCTTGATT--------..........................................................................................................................2750.60300000030000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTATAG----------CATTCTCT.........................................................................................................................................16200.6012000000000012000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTC.....................................................................................................................................................................................................................................................................................................................................................................24200.501000000001090000000
..............................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................26170.41700100011013000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGACTATAG----------CATTCTCTCTTGATT--------..........................................................................................................................2650.40200000020000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTATAG----------CATTCTCTCTTGATT--------..........................................................................................................................2580.38300000021000000000
..............................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................25200.35700000000007000000
...................................................................................................................................................................................................................................................................................................................................TCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................20200.30600000000006000000
.........................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGTATGA-----ACGT......................................................................................................................................................................................................................................................................................................................................................................27200.25500000020030000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCGACTATAG----------CATTCTCTCTT......................................................................................................................................2440.25100000001000000000
.....................................................................................................................................................................................................................................................................................................................................TGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................19200.20400000020200000000
...............................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTATGA-----ACGT......................................................................................................................................................................................................................................................................................................................................................................21200.20400000000004000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGT......................................................................................................................................................................................................................................................................................................................................................................23200.20400200000200000000
........................................................................................................................................................................................................................................................................................................................AGCCATGTCCGTCTGTCCGTATGA-----A.........................................................................................................................................................................................................................................................................................................................................................................25200.20400000020101000000
.................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTATGA-----AC........................................................................................................................................................................................................................................................................................................................................................................17200.15300000000003000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAG----------CATTCTCTCTTGAT...................................................................................................................................2680.13100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGACTATAG----------CATTCTCTCTTGAT...................................................................................................................................2580.13100000000100000000
.........................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGTATGA-----A.........................................................................................................................................................................................................................................................................................................................................................................24200.10200000010100000000
............................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTATGA-----AC........................................................................................................................................................................................................................................................................................................................................................................22200.10200000020000000000
.........................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGTATGA-----AC........................................................................................................................................................................................................................................................................................................................................................................25200.10200000000200000000
....................................................................................................................................................................................................................................................................................................................................CTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................20200.10200000000002000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----A.........................................................................................................................................................................................................................................................................................................................................................................20200.10200100010000000000
..................................................................................................................................................................................................................................................................................................................................GTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................21200.10200000000002000000
.................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTATGA-----ACG.......................................................................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTATAG----------CATTCTCTCTTGA....................................................................................................................................23120.08100000010000000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------AT...............................................................................................................................................................................................28180.06100000000010000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------AG...............................................................................................................................................................................................28180.06100000001000000000
..................................................................................................................................................................................................................................................................................................................................GTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................22190.05100000000001000000
..............................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCCGTA..................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTATGA-----ACGTCGC------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................24200.05100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTATAG----------CATTCTCTCT.......................................................................................................................................20200.05100100000000000000
..................................................................................................................................................................................................................................................................................TATACCCGTTACTCGTAGAGTAAA--------------AG.....................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000001000000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----AC........................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................TCTGTCCGTATGA-----ACG.......................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
...........................................................................................................................................................................................................................................................................................................................CATGTCCGTCTGTCCGTATGA-----..........................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
..................................................................................................................................................................................................................................................................................TATACCCGTTACTCGTAGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTATAG----------CATTCTCTCTT......................................................................................................................................19200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTCGC------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................26200.05100010000000000000
............................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTATGA-----..........................................................................................................................................................................................................................................................................................................................................................................20200.05100000001000000000
.................................................................................................................................................................................................................................................................................TTATACCCGTTACTCGTAGAGTAAA--------------A......................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
.........................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGT...................................................................................................................................................................................................................................................................................................................................................................................19200.05110000000000000000
............................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................27200.05100000000100000000
.............................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTATGA-----ACGTCG....................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
......................................................................................................................................................................................................................................................................................................................................GTCCGTATGA-----ACGTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................18200.05100000000001000000
droSec2
GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAGC----------------------------------------------------------TCTACTTCAGGCTTCAGCCCTTGGCA-------------------------------------------------------------------GTTATGAGT--GTGGAATTTTTGGTAGAGCCCACTTATTGTGAATCTGAGTTTCTTAATTATACCCGTTACTCGTAGAGTAAA--------------AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................GATGGAGTCCAGTGTGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................AGAGATGGAGTCCAGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
....................GATGGAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.......GCCGGCGCCAAGAGATGGAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..................GAGATGGAGTCCAGTGTGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................AGATGGAGTCCAGTGTGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
....................GATGGAGTCCAGTGTGGCCGCCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
dm3
GAGAAGAGCCGGCGCCAAGAGATGGAGTCCAGTGTGGCCGCCATGAGAAGGTAAGAACAGGAAC----------------------------------------------------------TCTACTTCAGGCTTCATTGCCGAGCA-------------------------------------------------------------------ATTATCAGT--GTGTTAATTTTGGTAGAGCCTAATGATTGTGAATCAGATATTCCTAATTATACCCGTTACTCGCAGAGTAAA--------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................AAGAGATGGAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGGAGTCCAGTGTGGCCGCCATGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAGCCGGCGCCAAGAGATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
........................GAGTCCAGTGTGGCCGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGAGATGGAGTCCAGTGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
.AGAAGAGCCGGCGCCAAGAGATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GATGGAGTCCAGTGTGGCCGCCATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGAGATGGAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................AAGAGATGGAGTCCAGTGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGTCCAGTGTGGCCGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGGCGCCAAGAGATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................TAATTTTGGTAGAGCCTAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...AAGAGCCGGCGCCAAGAGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GTCCAGTGTGGCCGCCATGAGAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................GAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TATCAGT--GTGTTAATTTTGGTAGAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AGATATTCCTAATTATACCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GTGTTAATTTTGGTAGAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............CAAGAGATGGAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................GAGATGGAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGGAGTCCAGTGTGGCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......................GGAGTCCAGTGTGGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CATGAGAAGGTAAGAACAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCCAAGAGATGGAGTCCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......AGCCGGCGCCAAGAGATGGAGTCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ATTGCCGAGCA-------------------------------------------------------------------ATTATCAGT--T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............GCCAAGAGATGGAGTCCAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................GTCCAGTGTGGCCGCCATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCCAAGAGATGGAGTCCAGTGTGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................AGATGGAGTCCAGTGTGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AATTATACCCGTTACTCGCAGAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGAGATGGAGTCCAGTGTGGCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCAAGAGATGGAGTCCAGTGTGGCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATCAGT--GTGTTAATTTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GGAAC----------------------------------------------------------TCTACTTCAGGCTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GATGGAGTCCAGTGTGGCCGCCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................TTGGTAGAGCCTAATGATTGTGAATCAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGAGATGGAGTCCAGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
GAGAAGAGTCGGCGCCAAGAGATGGAGTCCAGTGTGACCGCTATGAGAAAGTAAGACCC----------------TATAAAGAATATACATG------------------------------------------------------------------------------------------------------------CTG----G----ATCACT-------AGCCTA--T---TC----------------------------GA-----------------------------------------CCTGGTCTGTCTGTTTGTCCGTATGAGT---CCGTCGAGTTCACAGAAGCTTATTAGTTTATAGGGACG--------------------------------------------------------------------------------CGCTT-------------------GATTTGATA------ATTTGAT-----TCTTTT-----TTTTATTTG------CCTTGCCAATTG----------GCTTCTGTCTTG-----TTTTTTAATATGTAATTTGCTAGGCTTTTCGGCTTAATGAATATTAACTATAAGCTTTTCCATCCATAGCTCTGCCTATGATCTGAAT---------GTTGGTGGGCCCCTAACCCGATCGAAGTCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................GAGATGGAGTCCAGTGTGACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGATCTGAAT---------GTTGGTGGGCCC...................2511.0010010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT---------GTTGGTGGGCCCCTAACCCGA..........2411.0010001000
droYak3
CTTCAATCC-------------------------------------------------------------------------------------------------------------------------------------TTGTCGAAGGTAAAAACGTTTCCAAAT---------------------------------------------CAAT-------AACGGG--TTTTAA----------------------------TATTTATTATACCCGTTACTCGTAGAGTAAA--------------AGG---------------GT----ATACTAGGCTCGTTGAAAAG-----------------------------------------------TATT----------------------------------------------------------------------------------------------TAACTTTTAACTTTTTATT-TCTTATAGTCGGGGAACTCGACTATAG----------CATTC--------------------------------------------------------------------------------------------------------------------------------TTTCTTGCTTAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAG----------CATTC--------------------------------------------------------------------------------------------------------------------------------TTTCT.......2230.67200200000000
...........................................................................................................................................................................................................................................................................................TACTCGTAGAGTAAA--------------AGG---------------GT----ATACTAGG.......................................................................................................................................................................................................................................................................................................................................................................2880.38302000010000
..............................................................................................................................................................................................................................................................................................TCGTAGAGTAAA--------------AGG---------------GT----ATACTAGG.......................................................................................................................................................................................................................................................................................................................................................................2590.22202000000000
droEug1
GAGAAGATCCGCCGTCAGGAGATGGAGACCAGTGTGGCAGCTATGAGAAGGTAAGGAT------GCACTTAACTATTTAAGGGCCAAACAAT------------------------------------------------------------------------------------------------------------CTT----A----ATAACT--TA--AAATAG---------------------------------------------------------------------------------------------------------------------------TAAATACTTCTTAATGTTTAGGAAAATGGTTTTTAGTTTGTTAATTTTATTATT----------------------------------------------------------------------------------------------TTATTTTTATTTTTTAAATGGTTTTTAGTTTGTTAATTTTATTATTT----------TATTTTATTTTTTAT--------AATTTTTAATTTGTTTGACTTTCCGGTTAGACGAATGCTAACACTAAGCTTTTCCGCCCATAGCTCTGCCTACGATTTGAAT---------ATGGGTGGATCCGTGGCCCGTTCCAAGTCCGSizeHit CountTotal NormTotal
No Reads
droBia1
GAGAAGAGCCGGCGTCAAGAGATGGAGACCAGTGTGGCAGCCATGAGAAGGTAAGGA-----GTGC------------------TAAACAAGCCATTTCGAATCGTAGTTATTCAAGATATTTCTATTTTAAGCT--G----------------------------------------------GT-----------------TTTAG----TTTGCTTTTAAA--GTAGT--CA-CAA----------------------------AGAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGAAAGA-AAGTCACAAAGGTTTAATTTTGTAAAAGCTTTT------------------------------T-------------TT------------------------AA----TTTTGT---------------TTAATTTGTTTGGTTTTCCGGTTAGACGTATGCTAACTCACAGCTTTTCCGTTCCTAGCTCTGCCTACGATCTGAAT---------GTCGGTGGGCCCTTAACCCGTTCCAAGTCTGSizeHit CountTotal NormTotal
No Reads
droTak1
GAGAAGAGCCGGCGCCAGGAGATGGAGACCAGTGTGGCAGCCATGAGAAGGTAAGGA-----GTGC------------------TG--------------AAACATAGCTA-----GA-------------------------------------TAATTTTTCCAAGT-AATTTTTTAAATTTCT-----------------TTTACTTGCTTTGCTTACAAAAAGCT--------AA----------------------------AGATACTA----------TTTATATACTATTCATTAATATTATC---------------------------------------------------------------------------------------------------------------------------------------CTGGAAGGACAAGTTA-AAACGTATAATTTT---AGAGCCTTTGTCATAATA---TTACTTTAAACACCTTTTT-TTTT--------------------------------ACATTT---------------------------TTGCTTTCGCATTCCGGTTAGACGAATGCTAACACATAGCTTTTCCGTCCATAGCTCTGTCTACGATCTGAAT---------GTGGGTGGGCCCTTAACCCGTTCCAAGTCCGSizeHit CountTotal NormTotal
No Reads
droEle1
GAGAAGAGCCGGCGCCAAGAAATGGAGACCAGCGTGGCAGCCATGAGAAGGTAAGAAA------GTATTTAATTAT-------------------------------------------------------------------ATATATAATTAAATATATATTTGAAAT-----------TTTCGAAAGCTTGTAAAAGTCG----G----ATAAAA-------AGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTTAAATTTATTTTATTACTGTCTGTACCAGTGAGGTAATAAACAAGTACAACAGTAAAAAAA-AAACAATA-------------------GATTTGGTC------A-----CTTTAAAT---------------AATCCATTAATTTTTTTATTTTTTGTTTTTACACTT----------------------TT--TTTTGTTTGGCTTTCTGGTTAGACGAATGCTAACGAATAGCTTTTTTGCCCACAGCTCTGCCTACGATCTGAAT---------GTGGGTGGCACCTTGACCCGCTCCAAGTCCASizeHit CountTotal NormTotal
No Reads
droRho1
CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGGTTAAACGACTGCTAAAAACTAGCTTTTTCGCCCATAGCTCTGCCTATGACCTGAAT---------GTGGGTGGCGTCCTGACACGTTCCAAGTCCASizeHit CountTotal NormTotal
No Reads
droFic1
GAGAAGAGCCGGCGCCAGGAGATGGAGTCCAGTGTGGCAGCCATGAGAAGGTAGGAAC------GC------------------TTACCCCTTTATTTCT--TTGTAGT---------------------------------------------------------------------------GT-----------------TTTTG----TTTACT--TA--AAGTTGT--TTTTAA----------------------------TGCATGTTGTTT--TTTTTTGGTAGAATCGG--------------TGT---------------GT----ATCAAACGTTGTGTTCAAATT----------------------------------AATTAATTAAATTAAT----------------------------------------------------------------------------------------------TTATTAATATTTTTTATTTTATTTTTTTTTTATTTTTTTTATTTT--------------TTTTATTTTTTTTTTTTTTTAATTATGTTTTTTGTTTGGC-CTCTGGTTAGACGACTGCTAACACATAGCTTTTCCGCTTATAGCTCTGCATACGATCTGAAT---------GTGGGCGGCGCCTTGACCCGTTCCAAGTCGGSizeHit CountTotal NormTotal
No Reads
droKik1
TACCAAATG------------ATTAATTTCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTTTACACCTAGCTCTGTCTACGATATGAATATG------GTGGGTGGTGCCCTGACCCGCTCCAAGTCTASizeHit CountTotal NormTotal
No Reads
droAna3
GATTATTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTTTTTTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATTTGTTATTATTTAGCTCTGCCTACGATCTAAAC---------TTGGGCGCCACCATGACCCGCTCCCGCTCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCTACGATCTAAAC---------T..............................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAC---------TTGGGCGCCACCATGACCC............2511.001010000
droBip1
AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTTTTTTTAGCTCTGCTTACGATCTGAAC---------ATGGGCAGCACCATGACCCGCTCCAGGTCCASizeHit CountTotal NormTotal
No Reads
dp5
GAGAGGACCAAGCGCCTGGAAATGGAGACCAGTGTGGCGACCATGAAGAGGTATGACTCGGAGT-------------------------------------------------------------------GCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.AGAGGACCAAGCGCCTGGAAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....GACCAAGCGCCTGGAAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................GGAGACCAGTGTGGCGACCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
GAGAAGACCAAGCGCCTGGAAATGGAGACCAGTGTGGCGGCCATGAAGAGGTATGACTCGGAGT-------------------------------------------------------------------GCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..GAAGACCAAGCGCCTGGAAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.......CCAAGCGCCTGGAAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
GAGAAGACCAAACGCATGGCAATGGAGCAAAGTGTGGCTGCTCTACGCAGGTATGCACTGAATC-------------------------------------------------------------------AAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCT---------TTGGTTGTCACTTATAAA------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................AATGGAGCAAAGTGTGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
.........AAACGCATGGCAATGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...................CAATGGAGCAAAGTGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................GGCAATGGAGCAAAGTGTGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.................GGCAATGGAGCAAAGTGTGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...............ATGGCAATGGAGCAAAGTGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
................TGGCAATGGAGCAAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................GGCAATGGAGCAAAGTGTGGCTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.....GACCAAACGCATGGCAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
....................AATGGAGCAAAGTGTGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............ATGGCAATGGAGCAAAGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
GAGAAGAGCAAGCGGCTTGAAATGGAGTCCAGTGTGGCTGCAATGAGAAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................ATGGAGTCCAGTGTGGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
.......................GGAGTCCAGTGTGGCTGCAATGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
.................TGAAATGGAGTCCAGTGTGGCTGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
GTTTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTCACTACCTTATCTACAGCTCCACTTATGAGTTGGGCGTTGCAGTCGTTGGCGGTACGTTGACGCGTTCGAAGTCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGTCGTTGGCGGTA.....................1911.001000001
droGri2
GAGAAGGGCAAGCGTCTCGAAATGGAGTCCAGTGTGGCAGCAATGAGAAGGTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:10 PM