ID:dsi_25431 |
Coordinate:3r:4444559-4444635 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_4444206_4444558_+]; CDS [3r_4444206_4444558_+]; CDS [3r_4444636_4445459_+]; exon [3r_4444636_4445459_+]; intron [3r_4444559_4444635_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------------------################################################## GTTCAGCAAATGGTGGGTAAATGAGTTCAAAACTGTTAAGTTCCCGCCAGGTGAGTGCCGATCCCCGATCAATTGACTTAACCCACGAGCTTAAAGCATTCTCTCCTGCTCCATTGCAACCTCCAAGGTGGAACAGTTTTCGACTACTTTCTGGACAGCGAGACGAAGACCTTCCTG **************************************************......................(((...........((((.................))))............))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................TTTCGACTACTTTCTGGACAGCGAGA.............. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................................................................AGCGGGACGAAGACCT..... | 16 | 1 | 13 | 0.08 | 1 | 0 | 1 | 0 |
| ............GTGGGTAAATGAGGCCA.................................................................................................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 |
| ......................................................................................................................................................CTTGACTGCGAGACGAA.......... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 |
|
CAAGTCGTTTACCACCCATTTACTCAAGTTTTGACAATTCAAGGGCGGTCCACTCACGGCTAGGGGCTAGTTAACTGAATTGGGTGCTCGAATTTCGTAAGAGAGGACGAGGTAACGTTGGAGGTTCCACCTTGTCAAAAGCTGATGAAAGACCTGTCGCTCTGCTTCTGGAAGGAC
**************************************************......................(((...........((((.................))))............))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................TAACTGAATTGGCTGCTGGAAGTT.................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...........CGTGCCATTTACTCAAGTTTT................................................................................................................................................. | 21 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................CACACACGGCTAGGGGC.............................................................................................................. | 17 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 |
| ......................................................CACGGCTAGGGGTTA............................................................................................................ | 15 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................TCGCACTGCTTCTGGAT.... | 17 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..................................................CACACACGGCTAGGGG............................................................................................................... | 16 | 1 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 |
| ....................................................................................TGCTCGAATTTCGAAA............................................................................. | 16 | 1 | 14 | 0.14 | 2 | 0 | 0 | 0 | 0 | 2 |
| ..................................................................................................................................CTTGTGTAAAGCTGATG.............................. | 17 | 2 | 14 | 0.14 | 2 | 0 | 0 | 2 | 0 | 0 |
| ............................................................................................................................................................TCGCTCTGCTACTGG...... | 15 | 1 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...................................................ACACACGGCTAGGGG............................................................................................................... | 15 | 1 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........................................................................TGAATTGGTTGCTCG....................................................................................... | 15 | 1 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................CGCCTTGTGTAAAGCTGAT............................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 07:45 AM