ID:

dsi_25371

 Coordinate:

3r:8422311-8422564 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.4 -6.4

Flybase annnotation

three_prime_UTR [3r_8422521_8422641_-]; exon [3r_8422521_8422737_-]

No Repeatable elements found

Sense Strand Reads

##############################################################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGAGACCAGAGAGACAATAATGCTTCAGATGCCATTAATTTATTTATGTGTAATAATCCTTCATTTATGTTAAACAGTGTTCATACGTATATTAAAAAAAAAACAAGACAAAAATGGGTTAGTTTTTTATGTTTTTAGTTCTAACATCTCCCATTTATTATAAATGTAATATAGATACTTAATTGAAACACAAATATTAATGAAGTGAAGAAATCTATGATTTCCTGTTTAGTAACTTAACTTCCCTAAACTCAAAAGTGGTATGGCATGATTAATTAGGCAAGAATATGTTTATCATTACAGGAAACTTTGAGAACTGGTTATGGAACAGTCTTAATGCAACGCTTATTGGT
***************************************************************....(((((((((......((((.............((((((..(((........))).))))))))))......))).))))))..************************************************************************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 M053
female body
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
................................................................................TTCCTACATATATTAAAAAAAAAA.......................................................................................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TTATGGAACAGTCTTAATGCAACGCT....... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................TTATGTTTTTAGTTCTAACATCT............................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....GACCAGAGAGACAATAATGCTTCA...................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................GTTATGGAACAGTCTTAATG.............. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................TTCGAACGTGTATTAAAAAAAAAA.......................................................................................................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................ATTTATGTTAAACAGTGTTC............................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTTTAGTACCTTAACTTCCCT.......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................GTTGATCATTACCGGAAA.............................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................GGTATGGCATGATGA............................................................................... 15 1 6 0.33 2 0 0 0 0 0 2 0 0 0 0
CGAAGACCGCAGAGACAATAA............................................................................................................................................................................................................................................................................................................................................. 21 3 7 0.29 2 0 0 0 0 0 0 2 0 0 0
.........................................................................................................................................................................................................................................................................................................................AGGACTGGTTATGGATCA....................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................CTTCCCTTAACCCAAAAGT.............................................................................................. 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......CAGAGAGACACTAAT............................................................................................................................................................................................................................................................................................................................................ 15 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................AATAATGGATTAGTTTTTTA................................................................................................................................................................................................................................ 20 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................ATAATGGATTAGTTTTTT................................................................................................................................................................................................................................. 18 2 20 0.10 2 0 1 0 1 0 0 0 0 0 0
..................................................................................................................ATGGGATAGTTTTTTA................................................................................................................................................................................................................................ 16 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................ACTTCACTGAACTCAAAGGT.............................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................GAAGTGAAGAAATCGATCC..................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCCTCTGGTCTCTCTGTTATTACGAAGTCTACGGTAATTAAATAAATACACATTATTAGGAAGTAAATACAATTTGTCACAAGTATGCATATAATTTTTTTTTTGTTCTGTTTTTACCCAATCAAAAAATACAAAAATCAAGATTGTAGAGGGTAAATAATATTTACATTATATCTATGAATTAACTTTGTGTTTATAATTACTTCACTTCTTTAGATACTAAAGGACAAATCATTGAATTGAAGGGATTTGAGTTTTCACCATACCGTACTAATTAATCCGTTCTTATACAAATAGTAATGTCCTTTGAAACTCTTGACCAATACCTTGTCAGAATTACGTTGCGAATAACCA
************************************************************************************************************************************************************************************************************....(((((((((......((((.............((((((..(((........))).))))))))))......))).))))))..*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR618934
dsim w501 ovaries
..............................................................................................................................................ATTGTAGAGGGTGAATAA.................................................................................................................................................................................................. 18 1 2 3.00 6 6 0 0 0 0 0 0 0 0 0
........................................................................................ATATAATTTTTTTTTTGCTTAGTT.................................................................................................................................................................................................................................................. 24 3 10 2.60 26 0 7 0 8 8 0 0 3 0 0
...................................................................................................................................CAACAATCAAGATTGTAG............................................................................................................................................................................................................. 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................AATACCAAAATCAAGATTGTAGAGGGT........................................................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTACATTATATCTATGAA............................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................TTTCACCATACCGTACTAATTAATCTGT....................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................ATTATAGAGGGTAAATAA.................................................................................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................GATTGTAGAGGGTGAATAA.................................................................................................................................................................................................. 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................ATTGTAGAGGGGGAATAA.................................................................................................................................................................................................. 18 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
........................................................................................ATATAATTTTTTTTTTGCTTAGT................................................................................................................................................................................................................................................... 23 3 20 0.35 7 0 0 0 2 5 0 0 0 0 0
..CTCGGGTCTCTCTATTGTTA............................................................................................................................................................................................................................................................................................................................................ 20 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................AGAGGGTGAATAATAT............................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................ATTCTAGAGGGTAGATAA.................................................................................................................................................................................................. 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
................................................................AAAAACAATTTGTCAGAAGT.............................................................................................................................................................................................................................................................................. 20 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................TCAAGAGTGTAGAAGGTA....................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................TAGAGGGTGAATAATA................................................................................................................................................................................................ 16 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................ATTGTCGAGGGTGAATAA.................................................................................................................................................................................................. 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CGAGATTGTAGAGGGGA....................................................................................................................................................................................................... 17 2 10 0.10 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................TTGTAGAGGGTGAAT.................................................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................AGAGGGTGAATAATA................................................................................................................................................................................................ 15 1 14 0.07 1 0 0 0 0 0 0 0 1 0 0
...............GTTATGACGAACTGTACGGT............................................................................................................................................................................................................................................................................................................................... 20 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0
..............TCATATTACGAAGTCTACC................................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CCTTGTCCGTATTAGGTTG.......... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:8422261-8422614 - dsi_25371 CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGTGTAATAATCCTTC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAAAAAA-ACAAGACAAAAATGGG---------------------------------------------------------TTAGTTTTTTA---------------------------TGTTTTTAGTTCT--------AACATCTC----------------------CCATTTATTATAA---------------------ATGTAAT-------------------------ATAGATACTTA-ATTGAAACACAAATATTAATGAAGTGA----AG-----AA------------ATC-----------------------------------------------------TATGATTTC-CTGTTTAGTAACT----TAACTTCCCTAAACTCAAAAG----------------------------------------------------------------TGGTATGGCATGATT-----AATTAGGCAAGAATAT----GTTTATCATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCTTAATGCAACGC--TTATTGGT
droSec2 scaffold_12:1317597-1317950 - CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGTGTAATAATCCTTC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAAAAAG-AAAAGACAAAAATGGA---------------------------------------------------------TTCGATTTTTA---------------------------TGGCTTTAGTGTT--------AACA----------------------------AATAATTATAA---------------------GTGTAAT-------------------------ATATATACTTA-ATTTAAACACAAATATTTATGAAGTAA----AG-----AA------------ATCC----------------------------------------------------TATGATTTC-CTGTCTAGAAACT----TAACTTCCCTAAACTCAAAAG----------------------------------------------------------------TGCTGTGGCATGATTATGATAATTAGACAAGAATAT----GTTTATTATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCCTAATGCAATGC--TTATTGGT
dm3 chr3R:12838162-12838516 + CGGAGACCAGAGAGACA--AAAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGTGTAATAATCCTTC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAAAAAA-AAAAGACAAAAATGGG---------------------------------------------------------TTTGATTTATA---------------------------TGCATTTAGTGTT--------AACATCTC----------------------GAATTGATTATAA---------------------ATGTAAT-------------------------ATAGATACTTT-ATTTAAACACAAATATTTATGAAGTGA----AG-----AA------------ATCA----------------------------------------------------TATGATTTC-CTGTTTAGAAACT----TAACTTCCCTAAACTCAAAAG----------------------------------------------------------------TGGTATGGCATGATT-----AATTAGGCAAGAATAT----GTTTATCATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCCTAATGAAACGC--TTATTGGT
droEre2 scaffold_4770:8792169-8792546 - CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGACTAATAATCCTCC----AT-----CTATATTAAACACTGTTCGTACGT--A--CATTAAAAA-----ACAAGACAAAAATGGG---------------------------------------------------------TTCGACGTTTT---------------------------CGCTTTGAATGTT--------CGCATTT---------------------------------TAT---------------------CTGCAAT-----AGAAATTGAA------ACGTACAGATACTTC-ATTTAAACACCAGTACTTATGAAATAA----AG-----AA------------ATCT----------------------------------------------------TTTGATTT--CTATAGGCAAACT----TAACTTCCCTGAACTCAAAAG-------------------------TG---------GTATGCTTAATTGCGCTAATCG-----AAGCTTTGGCATGATT-----AATTAGCCAAGAATAT----GTTTATCATTGCAGGAAACTTT--AAGAACTGGTTGTGAAACA-GTCCTAATGCAACGT--TTATTGGT
droYak3 3R:11545509-11545873 - CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGATTAATAATCCTCC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAA-----ACAAGACAAAAAAGGG---------------------------------------------------------TTCGACTTTTA---------------------------CGCTTTGAATGCT--------TGCATTT---------------------------------------------------------------------------------------------------------------------TTATGAAATGA----A-------------------------ATGT------ATATTTATAAAAAGTAGAAATCGAATTATTAATCTAATGAATATGCTTTA-CTGTACAG-AACT----TAACTTCCCTTAACTCAAAAG-------------------------TG---------GTATGATTAGTTGCGCTATTCG-----AAGCTGTGGCATGATT-----AATTAGGCAAGAATAT----GTTTATCATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCCTAATGCAACGC--TTATTGGT
droEug1 scf7180000409804:273605-274016 + ---------GAGTTATA--TTAACGCCTC-----------------------A-GGAGA-CCTAAGTTTTGCCA--TTAATTTATTTATGTGTAATATTTCTTC----AT-----TTATGTTAAACAGTGTTCATACATATATATATTAAAACAAAAACCCAGAAAAAAA-GTGTT---AAG-------------------------------------------------ATTGCTTTTAA---------------------------TGCTTTTA-----------------TTT---------------------------------TATTTAATTAC-AGTTGATTATTAATAAAACCAA-TTTGAATTGAATCCTCAACGAAAATGTGTTCTAATCAAGAATCAAATACATATGAAATCAACATAA-----AA------------ATCA----------------------------------------------------ACTGATTTCCCTGTATTGAAAA-------------------------ATATTAACATTAGAA----------CGGGT-----AAGTATGCAT----------GTCT-----ATGCTCTGACATGATT-----AATTAGGCAAGAATAT----GATTATCAATACAGGAACCTTATAAAAAACTGGTTATGGAACA-GCCTTAAAGCGATGT--TTAATGGT
droBia1 scf7180000299102:784562-784922 + --GAGCCCGGAGAAACACTACAATGCCTC-----------------------A-GAAGC-GCTAAGTTTTGCCA--TTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAAAAGTGTTCATACGT--A--CATTAAAAA-----AACAGACAAAAATT-A---TTG-C-----T-------------------------------------------TTTGATTTTAATGTACATTTCTTACATTCTCATTTA------------------------------------CAATCTTT-TGTATTCAATACTTTTTATTA---------------------ATATAAC-------------------------AAA------------------------------------------------------------------------------GCTTC--------------------------------------------CTGAAAT----------------TGCT---------------TACTTCCAAA----------CAGGTGTAAC--AAATGCATGATTACCTTATTCA-----ATGCTCTGACATGATT-----AATTAGTCGAGAATAT----GTTTATCATAACAGGAACCTTAT-AGGAACTGGTTATGGAACT-GCCTTATTGCAATGC--CTAATGGT
droTak1 scf7180000415377:322577-322938 - TCGAGATCGAAGAGACACCACAATGCCTC-----------------------A-GATGC-GCTAAGCTTTGCCA--TTAATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAA-AGTGTTCATATGT--A--CATTAAAAAA----AACAGACAAAAAAG-A---TTG-C-----TATCATA-------------------------------------------TTTAT----------------------TTATAT--CTT------------------------------------------------------------------------------------------------------------------------TT-GTTTGAAAACAA--------------------G-----AATTGTCATTCT-GATCA--------TCTGAATTTC--------------------------------------------CTGTATGGGAATAAGGATTTCTTTCCT---------------AACTTTCAAA----------CGGGT--AATAAGTATGCATAATTGCCTTATTCA-----ATGCTCTGACATGATT-----AATTAGGCAAGAATAT----GTTTATCATAACAGGAACCTTAG-AAAAACTGGTTATAAACTATGCCTTAATGCAATGT--TTATTGGT
droEle1 scf7180000486474:1909461-1909828 + TGGAGACCGGAGTCACA--CTAAAGCCTT-----------------------A-GATGC-----------GCCAATCTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAACAGTGTTCATACGTATA--CATTAAAAA-----ACCAGAAAAAAA---GTT---AAACTTGCTTTTATATTCAAACTCATACAAAATACTAATTATTTTCAACATGTTCAACATA--TGTACATTT--TA--------------TATTTTCA------------------------------------------------------------------G----------------T-----A------AA---------------------------------------------------------------------------ATCATATAA------ACATTTC--------------------------------------------CTGTACTAAAACAAGAATAACTTTAA---------------AA--------A----------CGG---------ATATGCATAATTACCTTACTCA-----ATGCTCTGACATGATT-----AATTAGGCAGGAAT---------TATCATTACAGGAACCTAATATAAAACTGGTTATTAAACT-ACTTTATTGCCATGT--TTATTGGT
droRho1 scf7180000766820:1324-1672 + TGGAGACCGGAGTCACA--ACAATGCCCC-----------------------A-GATGC-GCTAAGTTTTGCCA--TTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAACAGTGTTCATACGTCTA--CATTAAAAA-----CCCTGACAAAAA---GT--TCG-C-------------------------------------------------CATGATTTTAT----------------------TTG---------------TACTTTAT-------------------------------------------CTATTT---AGTTATTCATGTAT----------A------AA---------------------------------------------------------------------------ATAATATGGGATTCCAAATTTC--------------------------------------------CTGAAATGAAACGAGAATATCTTTCA---------------AAGCTTT---------------------AATTACTATGCATAATTACCTTATTCA-----ATGCTTTGACATGATT-----AATTAGTCAGGAAT---------TATCATTACAGGAACCTTA--AAAAACTGGTTATTGAACT-GCTTTATTGCAATGT--TTATTGGT
droFic1 scf7180000452523:294771-295104 + TGGAGT-------CATT--ATTGCGCCTC-----------------------A-GATGT-GCTAAGTTTAGCCA--TTTATTTATTTACGTTTAATATGCCTAC----CT-----TTATGTTAAACCGTGTTCTTATCTGTA--CATTAAAAA-----GCCTAAAAATAATAT--------------------------------------------------------------ATTTATA---------------------------TGTTTTTG-----------------------------------------------------------TTT---AATAATTT------------------------------------------------------------------------------------------ATCCTTGA-AATTA--------TC--ATGTTC--------------------------------------------CTGAAATGAAACCAGAATGACTTTCC---------------AAACTTGTAAACATGATAATACAG---------GCATGCATAATTAACTTATTCA-----ATGCCCTGACATGATT-----AATTAATCGAGAATG-------CTATCATTACAGGAACCCTAA-TAAAACTGGTTATTAAACA-GCTTTGCTTCGATGT--TTAATGGT
droKik1 scf7180000302313:323316-323772 + TTTATCCTGGATGCATA--ACAGCGTTTGAAATTGGGCTTAAATCAGAGCTCAAAAG-TCGCCAAGTTTTGCCA--TTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAACCGTGTTCATACATATA--CATTAAAAA-----A-AAGACAAACAAATGTTATTT-C-CTATT-------------------------------------------TTTAACTTAAAATTACAT-----------------------------------------TACATTTATTTTACAATATTTATGTTTT-------------------TT--GAA-----------------CAA-GTTAAATTAGTTTCGCAGCAAA-----------------------------ATCCACTAC----TGAGTACAGTTGCCAACCCATATCT--------TCGTCACTTC--------------------------------------------CTGTTCTCAAACAAGAATTACTTTCA---------------A---TTGAAAACAATATCGTTCAAGT-------GTGTGCATAATTACCGTATTCAAAACTCTGCTCTGGCATGAT------AATTAAGCACGAATATACCTTTGTATCTCAGCAGGAACCTTTTAAAAAACTGGTTACGGATCT-G---TAATGCACTGC--T-AATGTT
droAna3 scaffold_13340:7064402-7064662 - TAAAGC------------------------------------------------------TCTAAACTTTGCCA--TTTATTTATTTATGTGTAACGAAATTTGAGTGTTCTATGTTATATTAAAT----------TGT--A--CATTAAAGA-----AAAACACAAAAAAC-A-------C-------------------------------------------------CAGAAACTTAA----------------------TCA---------------AAGTTG---------------------------------------------------------------------------------AACTAAAT---------------------------------------------------------------------------CACGTAC------ATA-----------------------------------------------------------------------------------------------------------------AT-------TCCTGCATAATTATCACACTTA-----CCACACGGACATGATT-----AATTATCCAAGAACAT----GTTTATCGTTACAGGAACCTTATAAGAAACTGGTTTCAAAACA-GCTTTAATACTTATTTTTTCTTTTT
droBip1 scf7180000396708:1790087-1790344 + TCTATA------------------------------------------------------------CTTTGCCA--TTTATTTATTTATGTGTAATGAAAATTGAGTGTTTTGTGTTATATTAAAT----------TGT--A--CATTAAAGAA----AAAAGACAAAAAAACA-------C-------------------------------------------------CTCAAATTTTA---------------------------T--CTT-------AAGTTG---------------------------------------------------------------------------------AACTAAAT---------------------------------------------------------------------------CACGTAC------ATA-----------------------------------------------------------------------------------------------------------------AT-------TCCTGCATAATTATCACACTTA-----CAACACGGACATGATT-----AATTATCCAAGAACAT----GTTTATCGTTACAGGAACCTTATATGAAACTGGTTTTAAAACA-GCTTTAATACTGTGTTTTTCTTTTT
dp5 2:17845487-17845648 + CTTGGTGCACAGCGAAA--GTAA--------------CCTGATCCGGTGCTCAGAAA-CGCTCTAGACGTGCCA--TTTATTTATTTATGCATAGCAAACTTCC----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTA-------------------TT--AAA-----------------AACCATTAAAATATTTTAGAACAAAA-----------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAGATAAC---------------------------------------------TTTGT
droPer2 scaffold_0:11705603-11705764 + CTTGGTGCACAGCGAAA--GTAA--------------CCTGATCCGGTGCTCAGAAA-CGCTCTAGACGTGCCA--TTTATTTATTTATGCATAGCAAACTTCC----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTA-------------------TT--AAA-----------------AACCATTAAAATATTTTAGAACAAAA-----------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAGATAAC---------------------------------------------TTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGTGTAATAATCCTTC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAAAAAA-ACAAGACAAAAATGGG---------------------------------------------------------TTAGTTTTTTA---------------------------TGTTTTTAGTTCT--------AACATCTC----------------------CCATTTATTATAA---------------------ATGTAAT-------------------------ATAGATACTTA-ATTGAAACACAAATATTAATGAAGTGA----AG-----AA------------ATC-----------------------------------------------------TATGATTTC-CTGTTTAGTAACT----TAACTTCCCTAAACTCAAAAG----------------------------------------------------------------TGGTATGGCATGATT-----AATTAGGCAAGAATAT----GTTTATCATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCTTAATGCAACGC--TTATTGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGGAACA-GTCTTAATGCAACGC--T.......2611.00100100000000000000
...............................................................................................................................................................................................................................................TTA---------------------------TGTTTTTAGTTCT--------AACATCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
....GACCAGAGAGACA--ATAATGCTTC-----------------------A-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGGAACA-GTCTTAATG................2011.00100100000000000000
............................................................................................................AT-----TTATGTTAAACAGTGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
droSec2
CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGTGTAATAATCCTTC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAAAAAG-AAAAGACAAAAATGGA---------------------------------------------------------TTCGATTTTTA---------------------------TGGCTTTAGTGTT--------AACA----------------------------AATAATTATAA---------------------GTGTAAT-------------------------ATATATACTTA-ATTTAAACACAAATATTTATGAAGTAA----AG-----AA------------ATCC----------------------------------------------------TATGATTTC-CTGTCTAGAAACT----TAACTTCCCTAAACTCAAAAG----------------------------------------------------------------TGCTGTGGCATGATTATGATAATTAGACAAGAATAT----GTTTATTATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCCTAATGCAATGC--TTATTGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................ATGTTAAACAGTGTTCATACGT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.............................................................................................................................................A--TATTAAAAAAAAG-AAAAGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................................................................................................AT-----TTATGTTAAACAGTGTTCATACGT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................AATAATCCTTC----AT-----TTATGTTAAACAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
....GACCAGAGAGACA--ATAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..............ACA--ATAATGCTTC-----------------------A-GA-------------TGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......CCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
dm3
CGGAGACCAGAGAGACA--AAAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGTGTAATAATCCTTC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAAAAAA-AAAAGACAAAAATGGG---------------------------------------------------------TTTGATTTATA---------------------------TGCATTTAGTGTT--------AACATCTC----------------------GAATTGATTATAA---------------------ATGTAAT-------------------------ATAGATACTTT-ATTTAAACACAAATATTTATGAAGTGA----AG-----AA------------ATCA----------------------------------------------------TATGATTTC-CTGTTTAGAAACT----TAACTTCCCTAAACTCAAAAG----------------------------------------------------------------TGGTATGGCATGATT-----AATTAGGCAAGAATAT----GTTTATCATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCCTAATGAAACGC--TTATTGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACTTT--GAGAACTGGTTA.................................2112.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATGTTAAACAGTGTTCATACGT--A--TAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACAGGAAACTTT--GAGA.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................AACAGTGTTCATACGT--A--TATTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................A--TTAATTTATTTATGTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--GAGAACTGGTTATGGAAC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................T-----TTATGTTAAACAGTGTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................TTATGTTAAACAGTGTTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATGAAGTGA----AG-----AA------------ATCA----------------------------------------------------T............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TAAACAGTGTTCATACGT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................GT--A--TATTAAAAAAAAA-AAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----AATTAGGCAAGAATAT----GTTTA................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................AT-----TTATGTTAAACAGTGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAGAGACA--AAAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAAAAAAA-AAAAGACAAAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................AT-----TTATGTTAAACAGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................ATAATCCTTC----AT-----TTATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTGATTTATA---------------------------TGCATTTAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGTGTTCATACGT--A--TATTAAAAAAAAA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGACA--AAAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TTATGTTAAACAGTGTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAAAAAAA-AAAAGACAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.6350000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AAAAAAAAA-AAAAGACAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.3320000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGACTAATAATCCTCC----AT-----CTATATTAAACACTGTTCGTACGT--A--CATTAAAAA-----ACAAGACAAAAATGGG---------------------------------------------------------TTCGACGTTTT---------------------------CGCTTTGAATGTT--------CGCATTT---------------------------------TAT---------------------CTGCAAT-----AGAAATTGAA------ACGTACAGATACTTC-ATTTAAACACCAGTACTTATGAAATAA----AG-----AA------------ATCT----------------------------------------------------TTTGATTT--CTATAGGCAAACT----TAACTTCCCTGAACTCAAAAG-------------------------TG---------GTATGCTTAATTGCGCTAATCG-----AAGCTTTGGCATGATT-----AATTAGCCAAGAATAT----GTTTATCATTGCAGGAAACTTT--AAGAACTGGTTGTGAAACA-GTCCTAATGCAACGT--TTATTGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............AGACA--ATAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000
.....................................................................................................................ATATTAAACACTGTTCGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.....................................................................................................................ATATTAAACACTGTTCGTACGT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
........................................................................................................................TTAAACACTGTTCGTACGT--A--CATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
..................................................................................................................................................................GACAAAAATGGG---------------------------------------------------------TTCGACGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
....GACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.......................................................................................................................ATTAAACACTGTTCGTACGT--A--C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................TTATGACTAATAATCCTCC----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTT--AAGAACTGGTTGTGAAACA-.........................2511.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTGCAGGAAACTTT--AAGAACT......................................2511.0010000100
.............GACA--ATAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.....................................................................................TTATGACTAATAATCCTCC----AT-----CT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
............................................................................................................AT-----CTATATTAAACACTGTTCGTACGT--A--C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.........................................................................................................................................................................ATGGG---------------------------------------------------------TTCGACGTTTT---------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................ATCCTCC----AT-----CTATATTAAACACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
droYak3
CGGAGACCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTAATTTATTTATGATTAATAATCCTCC----AT-----TTATGTTAAACAGTGTTCATACGT--A--TATTAAAAA-----ACAAGACAAAAAAGGG---------------------------------------------------------TTCGACTTTTA---------------------------CGCTTTGAATGCT--------TGCATTT---------------------------------------------------------------------------------------------------------------------TTATGAAATGA----A-------------------------ATGT------ATATTTATAAAAAGTAGAAATCGAATTATTAATCTAATGAATATGCTTTA-CTGTACAG-AACT----TAACTTCCCTTAACTCAAAAG-------------------------TG---------GTATGATTAGTTGCGCTATTCG-----AAGCTGTGGCATGATT-----AATTAGGCAAGAATAT----GTTTATCATTACAGGAAACTTT--GAGAACTGGTTATGGAACA-GTCCTAATGCAACGC--TTATTGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............GACA--ATAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100000000
......CCAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------TGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000
.........................................................................................................................TAAACAGTGTTCATACGT--A--TATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
................A--ATAATGCTTC-----------------------A-GA-------------TGCCA--TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTT--GAGAACTGGTTATGGAACA-.........................2611.00100000010000
.........................................................................................GATTAATAATCCTCC----AT-----TTATGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................................................................................................................GTTAAACAGTGTTCATACGT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................TATGTTAAACAGTGTTCATACGT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................TAATAATCCTCC----AT-----TTATGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............ACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTACAGGAAACTTT--GAGAACT......................................2311.00100000010000
.......CAGAGAGACA--ATAATGCTTC-----------------------A-GA-------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................AATAATCCTCC----AT-----TTATGTTAAACAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.............................................................................................AATAATCCTCC----AT-----TTATGTTAAACAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.......................................................................................................................................................AA-----ACAAGACAAAAAAGGG---------------------------------------------------------TTCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................GTTAAACAGTGTTCATACGC--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
............AGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.................................................................................................................................................................................................................................................A---------------------------CGCTTTGAATGCT--------TGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...................ATAATGCTTC-----------------------A-GA-------------TGCCA--T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................ATGATTAATAATCCTCC----AT-----TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAAGTAGAAATCGA..............................................................................................................................................................................................................................................1811.00101000000000
.............GACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............AGACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.................................................................................................ATCCTCC----AT-----TTATGTTAAACAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............GACA--ATAATGCTTC-----------------------A-GA-------------TGCCA--TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
droEug1
---------GAGTTATA--TTAACGCCTC-----------------------A-GGAGA-CCTAAGTTTTGCCA--TTAATTTATTTATGTGTAATATTTCTTC----AT-----TTATGTTAAACAGTGTTCATACATATATATATTAAAACAAAAACCCAGAAAAAAA-GTGTT---AAG-------------------------------------------------ATTGCTTTTAA---------------------------TGCTTTTA-----------------TTT---------------------------------TATTTAATTAC-AGTTGATTATTAATAAAACCAA-TTTGAATTGAATCCTCAACGAAAATGTGTTCTAATCAAGAATCAAATACATATGAAATCAACATAA-----AA------------ATCA----------------------------------------------------ACTGATTTCCCTGTATTGAAAA-------------------------ATATTAACATTAGAA----------CGGGT-----AAGTATGCAT----------GTCT-----ATGCTCTGACATGATT-----AATTAGGCAAGAATAT----GATTATCAATACAGGAACCTTATAAAAAACTGGTTATGGAACA-GCCTTAAAGCGATGT--TTAATGGTSizeHit CountTotal NormTotal
No Reads
droBia1
--GAGCCCGGAGAAACACTACAATGCCTC-----------------------A-GAAGC-GCTAAGTTTTGCCA--TTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAAAAGTGTTCATACGT--A--CATTAAAAA-----AACAGACAAAAATT-A---TTG-C-----T-------------------------------------------TTTGATTTTAATGTACATTTCTTACATTCTCATTTA------------------------------------CAATCTTT-TGTATTCAATACTTTTTATTA---------------------ATATAAC-------------------------AAA------------------------------------------------------------------------------GCTTC--------------------------------------------CTGAAAT----------------TGCT---------------TACTTCCAAA----------CAGGTGTAAC--AAATGCATGATTACCTTATTCA-----ATGCTCTGACATGATT-----AATTAGTCGAGAATAT----GTTTATCATAACAGGAACCTTAT-AGGAACTGGTTATGGAACT-GCCTTATTGCAATGC--CTAATGGTSizeHit CountTotal NormTotal
No Reads
droTak1
TCGAGATCGAAGAGACACCACAATGCCTC-----------------------A-GATGC-GCTAAGCTTTGCCA--TTAATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAA-AGTGTTCATATGT--A--CATTAAAAAA----AACAGACAAAAAAG-A---TTG-C-----TATCATA-------------------------------------------TTTAT----------------------TTATAT--CTT------------------------------------------------------------------------------------------------------------------------TT-GTTTGAAAACAA--------------------G-----AATTGTCATTCT-GATCA--------TCTGAATTTC--------------------------------------------CTGTATGGGAATAAGGATTTCTTTCCT---------------AACTTTCAAA----------CGGGT--AATAAGTATGCATAATTGCCTTATTCA-----ATGCTCTGACATGATT-----AATTAGGCAAGAATAT----GTTTATCATAACAGGAACCTTAG-AAAAACTGGTTATAAACTATGCCTTAATGCAATGT--TTATTGGTSizeHit CountTotal NormTotal
No Reads
droEle1
TGGAGACCGGAGTCACA--CTAAAGCCTT-----------------------A-GATGC-----------GCCAATCTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAACAGTGTTCATACGTATA--CATTAAAAA-----ACCAGAAAAAAA---GTT---AAACTTGCTTTTATATTCAAACTCATACAAAATACTAATTATTTTCAACATGTTCAACATA--TGTACATTT--TA--------------TATTTTCA------------------------------------------------------------------G----------------T-----A------AA---------------------------------------------------------------------------ATCATATAA------ACATTTC--------------------------------------------CTGTACTAAAACAAGAATAACTTTAA---------------AA--------A----------CGG---------ATATGCATAATTACCTTACTCA-----ATGCTCTGACATGATT-----AATTAGGCAGGAAT---------TATCATTACAGGAACCTAATATAAAACTGGTTATTAAACT-ACTTTATTGCCATGT--TTATTGGTSizeHit CountTotal NormTotal
No Reads
droRho1
TGGAGACCGGAGTCACA--ACAATGCCCC-----------------------A-GATGC-GCTAAGTTTTGCCA--TTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAACAGTGTTCATACGTCTA--CATTAAAAA-----CCCTGACAAAAA---GT--TCG-C-------------------------------------------------CATGATTTTAT----------------------TTG---------------TACTTTAT-------------------------------------------CTATTT---AGTTATTCATGTAT----------A------AA---------------------------------------------------------------------------ATAATATGGGATTCCAAATTTC--------------------------------------------CTGAAATGAAACGAGAATATCTTTCA---------------AAGCTTT---------------------AATTACTATGCATAATTACCTTATTCA-----ATGCTTTGACATGATT-----AATTAGTCAGGAAT---------TATCATTACAGGAACCTTA--AAAAACTGGTTATTGAACT-GCTTTATTGCAATGT--TTATTGGTSizeHit CountTotal NormTotal
No Reads
droFic1
TGGAGT-------CATT--ATTGCGCCTC-----------------------A-GATGT-GCTAAGTTTAGCCA--TTTATTTATTTACGTTTAATATGCCTAC----CT-----TTATGTTAAACCGTGTTCTTATCTGTA--CATTAAAAA-----GCCTAAAAATAATAT--------------------------------------------------------------ATTTATA---------------------------TGTTTTTG-----------------------------------------------------------TTT---AATAATTT------------------------------------------------------------------------------------------ATCCTTGA-AATTA--------TC--ATGTTC--------------------------------------------CTGAAATGAAACCAGAATGACTTTCC---------------AAACTTGTAAACATGATAATACAG---------GCATGCATAATTAACTTATTCA-----ATGCCCTGACATGATT-----AATTAATCGAGAATG-------CTATCATTACAGGAACCCTAA-TAAAACTGGTTATTAAACA-GCTTTGCTTCGATGT--TTAATGGTSizeHit CountTotal NormTotal
No Reads
droKik1
TTTATCCTGGATGCATA--ACAGCGTTTGAAATTGGGCTTAAATCAGAGCTCAAAAG-TCGCCAAGTTTTGCCA--TTTATTTATTTATGTGTAATATTCCTTC----AT-----TTATGTTAAACCGTGTTCATACATATA--CATTAAAAA-----A-AAGACAAACAAATGTTATTT-C-CTATT-------------------------------------------TTTAACTTAAAATTACAT-----------------------------------------TACATTTATTTTACAATATTTATGTTTT-------------------TT--GAA-----------------CAA-GTTAAATTAGTTTCGCAGCAAA-----------------------------ATCCACTAC----TGAGTACAGTTGCCAACCCATATCT--------TCGTCACTTC--------------------------------------------CTGTTCTCAAACAAGAATTACTTTCA---------------A---TTGAAAACAATATCGTTCAAGT-------GTGTGCATAATTACCGTATTCAAAACTCTGCTCTGGCATGAT------AATTAAGCACGAATATACCTTTGTATCTCAGCAGGAACCTTTTAAAAAACTGGTTACGGATCT-G---TAATGCACTGC--T-AATGTTSizeHit CountTotal NormTotal
No Reads
droAna3
TAAAGC------------------------------------------------------TCTAAACTTTGCCA--TTTATTTATTTATGTGTAACGAAATTTGAGTGTTCTATGTTATATTAAAT----------TGT--A--CATTAAAGA-----AAAACACAAAAAAC-A-------C-------------------------------------------------CAGAAACTTAA----------------------TCA---------------AAGTTG---------------------------------------------------------------------------------AACTAAAT---------------------------------------------------------------------------CACGTAC------ATA-----------------------------------------------------------------------------------------------------------------AT-------TCCTGCATAATTATCACACTTA-----CCACACGGACATGATT-----AATTATCCAAGAACAT----GTTTATCGTTACAGGAACCTTATAAGAAACTGGTTTCAAAACA-GCTTTAATACTTATTTTTTCTTTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................ATTTATTTATGTGTAACGAAATTTGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
.............................................................................TTATTTATTTATGTGTAACGAAATTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAT----GTTTATCGTTACAGGAAC...................................................2511.001000010
.....................................................................................TTATGTGTAACGAAATTTGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................TTTATGTGTAACGAAATTTGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.........................................................................A--TTTATTTATTTATGTGTAACGAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................TTTGCCA--TTTATTTATTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331010000
........................................................................................................................................................A-----AAAACACAAAAAAC-A-------C-------------------------------------------------CC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101010000
droBip1
TCTATA------------------------------------------------------------CTTTGCCA--TTTATTTATTTATGTGTAATGAAAATTGAGTGTTTTGTGTTATATTAAAT----------TGT--A--CATTAAAGAA----AAAAGACAAAAAAACA-------C-------------------------------------------------CTCAAATTTTA---------------------------T--CTT-------AAGTTG---------------------------------------------------------------------------------AACTAAAT---------------------------------------------------------------------------CACGTAC------ATA-----------------------------------------------------------------------------------------------------------------AT-------TCCTGCATAATTATCACACTTA-----CAACACGGACATGATT-----AATTATCCAAGAACAT----GTTTATCGTTACAGGAACCTTATATGAAACTGGTTTTAAAACA-GCTTTAATACTGTGTTTTTCTTTTTSizeHit CountTotal NormTotal
No Reads
dp5
CTTGGTGCACAGCGAAA--GTAA--------------CCTGATCCGGTGCTCAGAAA-CGCTCTAGACGTGCCA--TTTATTTATTTATGCATAGCAAACTTCC----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTA-------------------TT--AAA-----------------AACCATTAAAATATTTTAGAACAAAA-----------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAGATAAC---------------------------------------------TTTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................GTAA--------------CCTGATCCGGTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...GGTGCACAGCGAAA--GTAA--------------CCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAGATAAC---------------------------------------------TTT..2011.0010100000000
....................................................AGAAA-CGCTCTAGACGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................CTAGACGTGCCA--TTTATTTATTTATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................................................ATAGCAAACTTCC----AT-----CTACTTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
....GTGCACAGCGAAA--GTAA--------------CCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
..........AGCGAAA--GTAA--------------CCTGATCCGGTGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...GGTGCACAGCGAAA--GTAA--------------CCTGATCCGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
...................................................CAGAAA-CGCTCTAGACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................GATCCGGTGCTCAGAAA-CGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.............GAAA--GTAA--------------CCTGATCCGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................CTTCC----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
...........GCGAAA--GTAA--------------CCTGATCCGGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...............................................................................ATTTATTTATGCATAGCAAACTTCC----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.............................................................................................AGCAAACTTCC----AT-----CTACTTTTAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
........................................GATCCGGTGCTCAGAAA-CGCTCTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................GATCCGGTGCTCAGAAA-CGCTCTAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..............................................GTGCTCAGAAA-CGCTCTAGACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.......................................................................................................C----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
................................................GCTCAGAAA-CGCTCTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.....................................................GAAA-CGCTCTAGACGTGCCA--TTTATTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
....................TAA--------------CCTGATCCGGTGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTA-------------------TT--AAA-----------------AAC...........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................A--TTTATTTATTTATGCATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............GAAA--GTAA--------------CCTGATCCGGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
CTTGGTGCACAGCGAAA--GTAA--------------CCTGATCCGGTGCTCAGAAA-CGCTCTAGACGTGCCA--TTTATTTATTTATGCATAGCAAACTTCC----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTA-------------------TT--AAA-----------------AACCATTAAAATATTTTAGAACAAAA-----------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAGATAAC---------------------------------------------TTTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................GCTCAGAAA-CGCTCTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
...................GTAA--------------CCTGATCCGGTGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002110000
.....................AA--------------CCTGATCCGGTGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
CTTGGTGCACAGCGAAA--GTAA--------------CCTGATCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...........GCGAAA--GTAA--------------CCTGATCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................GTAA--------------CCTGATCCGGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................GTAA--------------CCTGATCCGGTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................CCGGTGCTCAGAAA-CGCTCTAGACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................................................................................................TTCC----AT-----CTACTTTTAAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................AA--------------CCTGATCCGGTGCTCAGAAA-CGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................CCGGTGCTCAGAAA-CGCTCTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................A-------------------TT--AAA-----------------AACCATTAAAATATTTTAGAAC........................................................................................................................................................................................................................................................................................................................................................2811.001100000
................A--GTAA--------------CCTGATCCGGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................TAA--------------CCTGATCCGGTGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000

Generated: 05/18/2015 at 05:01 PM