ID:

dsi_25340

 Coordinate:

node_50677:15713-15763 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.8 -4.7 -4.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
hAT-2_DSeDNAhAT-Ac+
mature
  1. 2l:19709273-19709298 +
  2. 2l:21531741-21531766 +
  3. 2r:11302-11327 -
  4. 3r:367974-367999 -
  5. node_32265:123-148 +
  6. dsi_15555  node_28136:10851-10876 -
  7. node_32266:31-56 +
  8. dsi_25340  node_50677:15720-15745 +
star

Sense Strand Reads

GGTTTTTCGGCACTGGCGTCACTAACACTTTGATACAGCGAGAGAAACATGTAAGTTTGGTAAATTTTATACGGAATGGAAATTATAATTTTCTTTTTCAGATTATAGAAAAAAATAAAATAAAAAAAAATAACTATTTGAGAAGATTGCT
**************************************************......................((((.(((((.......))))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR902009
testis
 O002
Head
 SRR902008
ovaries
 M024
male body		 M053
female body
 M025
embryo
...................CACTAACACTTTGATACAGCGAGAGA.......................................................................................................... 26 0 4 33.50 134 100 0 31 3 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGCGAGAG........................................................................................................... 25 0 4 22.25 89 66 4 19 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAAT.................................................................... 26 0 8 21.00 168 0 147 4 15 2 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAA...................................................................... 24 0 8 16.88 135 0 84 5 36 1 8 1 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTATAATTTTC.......................................................... 27 0 1 16.00 16 14 0 2 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAA..................................................................... 25 0 8 14.25 114 0 64 2 46 0 0 1 0 0 0 1 0
...................CACTAACACTTTGATACAGCGAGA............................................................................................................ 24 0 4 11.00 44 28 2 14 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTATAATTT............................................................ 25 0 1 11.00 11 7 0 4 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGCGAG............................................................................................................. 23 0 4 9.50 38 32 1 5 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGAGAGAAACA...................................................................................................... 27 0 1 8.00 8 7 1 0 0 0 0 0 0 0 0 0 0
.............TGGCGTCACTAACACTTTGATACAGC................................................................................................................ 26 0 2 5.50 11 1 5 2 3 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGA....................................................................... 25 0 8 5.25 42 0 24 0 0 11 0 5 0 2 0 0 0
...................CACTAACACTTTGATACAGCGAGAGAAACA...................................................................................................... 30 0 1 5.00 5 3 0 2 0 0 0 0 0 0 0 0 0
..................TCACTAACACTTTGATACAGCGAGA............................................................................................................ 25 0 4 4.75 19 3 0 16 0 0 0 0 0 0 0 0 0
..................TCACTAACACTTTGATACAGCGAG............................................................................................................. 24 0 4 4.50 18 1 0 17 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTATAATT............................................................. 24 0 1 4.00 4 2 0 2 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGAGAGA.......................................................................................................... 23 0 6 3.83 23 9 4 10 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAA...................................................................... 26 0 8 3.38 27 0 15 0 0 9 0 3 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGA....................................................................... 23 0 8 3.38 27 0 19 0 7 1 0 0 0 0 0 0 0
...................................................TAAGTTTGGTAAATTTTATACGGAA........................................................................... 25 0 7 2.43 17 4 4 8 1 0 0 0 0 0 0 0 0
.................................................TGTAAGTTTGGTAAATTTTATACGGAA........................................................................... 27 0 6 2.33 14 8 1 4 1 0 0 0 0 0 0 0 0
.............TGGCGTCACTAACACTTTGATACAGCGA.............................................................................................................. 28 0 2 2.00 4 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGATTATAGAAAAGAAAAAAATAAA........................... 28 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................TTTTTCAGATTATAGAAAAGAAAAAAA............................... 27 2 5 2.00 10 1 0 9 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAAA..................................................................... 27 0 8 1.88 15 0 4 1 0 6 0 4 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGG........................................................................ 24 0 8 1.50 12 0 3 0 0 8 0 0 0 1 0 0 0
..................TCACTAACACTTTGATAC................................................................................................................... 18 0 6 1.33 8 0 0 0 0 0 8 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAAAT.................................................................... 28 0 8 1.25 10 0 4 2 0 2 0 1 0 1 0 0 0
..................TCACTAACACTTTGATACAGCGAGAGA.......................................................................................................... 27 0 4 1.25 5 1 0 4 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGATTATAGAAAAGAAAAAAA............................... 24 2 5 1.20 6 4 0 2 0 0 0 0 0 0 0 0 0
..............................................................AATTTTATACGGAATGGAAA..................................................................... 20 0 8 1.13 9 0 0 0 0 1 0 0 8 0 0 0 0
........................................................................................................................TAAAAAAAAATAACTATTTGAGAAGA..... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTA.................................................................. 19 0 8 1.00 8 0 0 0 0 0 8 0 0 0 0 0 0
.............................................................................................TTTTTCAGATTATAGAAAAAAAAAAAA............................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................TCAGATTATAGAAAAGAAAAAAATAAAAA......................... 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CAGATTATAGAAAAGAAAAAAATAAAAAG........................ 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGATTATAGAAAAGAAAAAAATGA............................ 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGAGAG........................................................................................................... 22 0 6 1.00 6 0 0 0 0 0 6 0 0 0 0 0 0
..................................................................................................CAGATTATAGAAAAGAAAAAAATAAAAAA........................ 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGAGAGAAA........................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTTATACGGAATGGAAAT.................................................................... 19 0 8 1.00 8 0 0 0 0 0 0 0 8 0 0 0 0
.................................................................................................TCAGATTATAGAAAATAAAAAAATAAAA.......................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................TTGATACAGCGAGAGAAACATGTA.................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...TTTTCGGCACTGGCGTCACTAACAC........................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTATAA............................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................CAGATTATAGAAAAGAAAAAAATAAAAA......................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGATTATAGAAAAAAATAAAATA............................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTTATACGGAATGGAAATTATA................................................................ 23 0 8 1.00 8 0 0 0 0 0 8 0 0 0 0 0 0
.................................................................................................TCAGATTATAGAAAAAAAAAAAATAAAAAA........................ 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGAAATTATAATTTTCTTTTTCAGA................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............TGGCGTCACTAACACTTTGATACAGCG............................................................................................................... 27 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................TTTTTCAGATTATAGAAAAAAATAAC................................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGA.............................................................................................................. 19 0 6 1.00 6 0 0 0 0 0 6 0 0 0 0 0 0
...................................................................................................................TAAAATAAAAAAAAATAACTATTTGAGA........ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGAGAGAAAC....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTATAATTTT........................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTTCAGATTATAGAAAAAAAAAAAAA.............................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......TCCGCACTGGCGTCACTAACACTTTGA...................................................................................................................... 27 1 6 0.83 5 0 4 1 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAAA.................................................................... 26 1 8 0.75 6 0 2 0 2 0 0 2 0 0 0 0 0
..................TCACTAACACTTTGATACAGCGAGAG........................................................................................................... 26 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
........CGCACTGGCGTCACTAACACTTTGATA.................................................................................................................... 27 1 6 0.67 4 1 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................TTTCAGATTATAGAAAAGAAAAAAA............................... 25 2 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGC................................................................................................................ 20 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAATTA.................................................................. 28 0 8 0.50 4 1 0 1 2 0 0 0 0 0 0 0 0
.....................CTAACACTTTGATACAGCGAGAGA.......................................................................................................... 24 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
.............TGGCGTCACTAACACTTTGATACAGCGAGA............................................................................................................ 30 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................GACTAACACTTTGATACAGCGAGA............................................................................................................ 24 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CAGATTATAGAAAAGAAAAAAATAA............................ 25 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
................CGTCACTAACACTTTGATACAGCGAGAGA.......................................................................................................... 29 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTTCAGATTATAGAAAAGAAAAAAA............................... 26 2 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................TTTCAGATTATAGAAAAGAAAAAAAT.............................. 26 2 5 0.40 2 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................TGGGAAATTTTATACGGAATGGAAA..................................................................... 25 1 8 0.38 3 0 2 0 1 0 0 0 0 0 0 0 0
.................................................................TTTATACGGAATGGA....................................................................... 15 0 8 0.38 3 0 0 0 0 3 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAAC..................................................................... 27 1 8 0.38 3 0 0 0 0 3 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGT....................................................................... 25 1 8 0.38 3 0 0 0 0 1 0 2 0 0 0 0 0
...........ACTGGCGTCACTAACACTTTGATACT.................................................................................................................. 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.............TGGCGTCACTAACACTTTGATA.................................................................................................................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............TGGCGTCACTAACACTTTGATACAG................................................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGCGAGAGAT......................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGCGAGAT........................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGGAAATTTTATACGGAATGGAAAT.................................................................... 26 1 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTCTGATACAGCGAGA............................................................................................................ 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................GACTAACACTTTGATACAGCGAGAGA.......................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAAT..................................................................... 27 1 8 0.25 2 0 0 0 0 1 0 0 0 1 0 0 0
.................................................................TTTATACGGAATGGAAA..................................................................... 17 0 8 0.25 2 0 0 0 0 2 0 0 0 0 0 0 0
........................................................................................................ATAGAAAAAAGGAAAATAAAAAA........................ 23 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................TTATACGGAATGGAA...................................................................... 15 0 8 0.25 2 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAT..................................................................... 25 1 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATGCAGCGAGAG........................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGCG............................................................................................................... 21 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................AATTTTATACGGAATGGA....................................................................... 18 0 8 0.25 2 0 0 0 0 2 0 0 0 0 0 0 0
..................TCACTAACACTTTGATACACCGAGAGA.......................................................................................................... 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...................TACTAACACTTTGATACAGCGAGAG........................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAC...................................................................... 24 1 8 0.25 2 0 0 1 1 0 0 0 0 0 0 0 0
....................ACTAACACTTTGATACAGCGAGA............................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAC..................................................................... 25 1 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGTT...................................................................... 26 2 8 0.25 2 0 0 0 0 1 0 0 0 1 0 0 0
...............................................................ATTTTATACGGAATGGAA...................................................................... 18 0 8 0.25 2 0 0 0 0 2 0 0 0 0 0 0 0
........................................................TTGGTAAATTTTATACGGAATGGAAAT.................................................................... 27 0 8 0.25 2 0 1 1 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACG.............................................................................. 18 0 8 0.25 2 0 0 0 0 2 0 0 0 0 0 0 0
...................CACTAACACTTTGATATAGCGAGAGA.......................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTCATACAGCGAGAG........................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAGCGAGAGACACA...................................................................................................... 30 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................CTAACACTTTGATACAGCGAGAG........................................................................................................... 23 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................TTCAGATTATAGAAAAGAAAAAAATA............................. 26 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................GTTAATTTTATACGGAA........................................................................... 17 1 10 0.20 2 0 0 1 1 0 0 0 0 0 0 0 0
.................................................................................................TCAGATTATAGAAAAGAAAAAAATA............................. 25 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCATATTGTAGAAAAAAAAAAAA............................... 24 3 10 0.20 2 0 0 0 0 0 0 1 0 1 0 0 0
.................................................................................................TCAGATTATAGAAAAGAAAAAAA............................... 23 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGATTATAGAAAATATT................................... 20 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CACTTTCAGATTCTAGAAAAA...................................... 21 3 11 0.18 2 0 0 2 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGACAGA.......................................................................................................... 23 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................TGTAAGTTTGGTAAATTTTATACGGA............................................................................ 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTAAGTTTGGAAAATTTTATACGGAA........................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
......TCCGCACTGGCGTCACTAACACTTTGATA.................................................................................................................... 29 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...................CACTAACACTTTGATACAA................................................................................................................. 19 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................TGTAAGTTTGGTAAATTTTATACGGAT........................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
......................TAACACTTTGATACAGCGAG............................................................................................................. 20 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
......TCCGCACTGGCGTCACTAACACTT......................................................................................................................... 24 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................GTTTGGTAAATTTTATACGGAATG......................................................................... 24 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................GTTTGGTAAATTTTATACGGAATGGA....................................................................... 26 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................TTTTCAGATTATAGAAAA....................................... 18 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................AAGTTTGGTAAATTTTATACGGAA........................................................................... 24 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................CTAAGTTTGGTAAATTTTATACGGAA........................................................................... 26 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................TGTAAGGTTGGTAAATTTTATACGGAA........................................................................... 27 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................GTTTGGTAAATTTTATACGGAAT.......................................................................... 23 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................TATAGGATAAAATAGAATAAAAA......................... 23 3 14 0.14 2 0 0 2 0 0 0 0 0 0 0 0 0
.................................................TGTAAGTTTGGTAAATT..................................................................................... 17 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGGTAAATTTTATACGGAATGGT....................................................................... 24 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAATTATA................................................................ 21 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATG......................................................................... 23 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................TGGTACATTTTATACGGAATGGAACT.................................................................... 26 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................CGGTAAATTTTATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAGTTTTATACGGAATGGAT...................................................................... 26 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TTGTAAATTTTATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TGTTAAATTTTATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGAAAT.................................................................... 17 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGGA...................................................................... 24 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TTTTATACGGAATGGA....................................................................... 16 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................TTTTATACGGAATGG........................................................................ 15 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................TTTCTTTTTCAGATTATAGA.......................................... 20 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATAAGGAATGGAAAT.................................................................... 26 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAT...................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTTATACGGAATGGAA...................................................................... 16 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................TTGGTAAATTTTATACGGAATGGAAA..................................................................... 26 0 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................TTATACGGAATGGAAA..................................................................... 16 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATCGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................ATTTTATACGGAATGGAAAT.................................................................... 20 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................GGTAAATTTTATACGGAATGGAAAT.................................................................... 25 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGG........................................................................ 22 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAC...................................................................... 26 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................TGGCAAATTTTATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................GGTAAATTTTATACGGAATGGA....................................................................... 22 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................GGGTAAATTTTATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................TAAATTTTATACGGAATGGAAAT.................................................................... 23 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTTATACGGGATGGAAA..................................................................... 17 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAGTGG........................................................................ 24 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TGGTAAATTGTATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGAAATA................................................................... 27 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGATT..................................................................... 27 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................TTTTATACGGAATGGAA...................................................................... 17 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TGGTAAATTTAATACGGAATGGAAAT.................................................................... 26 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTTATACGGAATGGAAAT.................................................................... 18 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TGTTAAATTTTATACGGAATGGAAA..................................................................... 25 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................TTTTATACGGAATGGAAA..................................................................... 18 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TGTTAAATTTTATACGAAATGGAAAT.................................................................... 26 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTTCTTTTTCAGATTATAGAAA........................................ 22 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGC....................................................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAA........................................................................... 21 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................AAATTTTATACGGAATGGAAAT.................................................................... 22 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TGTGAAATTTTATACGGAATGGAAA..................................................................... 25 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TGGTAAATTTTATACGGAATGGACT..................................................................... 25 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................ATACGGAATGGAAAT.................................................................... 15 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGGAAAA.................................................................... 28 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................TTTGGTAAACTTTATACGGAATGGA....................................................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................TTGGTAAATTTTATACGGAA........................................................................... 20 0 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................TGGTAAATTTTATACGGAATG......................................................................... 21 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................ATTTTTCAGATTATAGAAA........................................ 19 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................GTAAATTTTATACGG............................................................................. 15 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................CTTTATACGGAATGGA....................................................................... 16 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................TTCTTTTTCAGATTATAGA.......................................... 19 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................TTTGGTAAATTTTATACGGAATGAAAAAA................................................................... 29 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................AAAAATAACGATGTGAGA........ 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTTCAGATTATAGAA......................................... 16 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................AATTTTATACGGAATG......................................................................... 16 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................ATAATTTTATACGGAATGGA....................................................................... 20 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................GTTAATTTTATACGGA............................................................................ 16 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTTATACGGAATGGC....................................................................... 15 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................TTACAGATTATAGAAAA....................................... 17 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTTATACGGAATGGATA..................................................................... 18 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................GTTAATTTTATACGG............................................................................. 15 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................TTATACGGAATGGATAA.................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................TTGTCAGATTGTATAAAAAAA.................................... 21 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TATATACGGAATGGA....................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................AAAAAAATAAAATAAAAAA........................ 19 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

CCAAAAAGCCGTGACCGCAGTGATTGTGAAACTATGTCGCTCTCTTTGTACATTCAAACCATTTAAAATATGCCTTACCTTTAATATTAAAAGAAAAAGTCTAATATCTTTTTTTATTTTATTTTTTTTTATTGATAAACTCTTCTAACGA
**************************************************......................((((.(((((.......))))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 O002
Head
 M053
female body
 SRR902009
testis
......AGGCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 26 1 6 34.33 206 151 22 30 0 0 3 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAAACT...................................................................................................................... 27 1 6 14.83 89 63 9 14 0 0 3 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGA.......................................................................................................................... 23 1 6 11.50 69 4 61 0 0 0 4 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAAA........................................................................................................................ 25 1 6 4.33 26 26 0 0 0 0 0 0 0 0 0
.......GGCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 25 1 6 4.17 25 17 4 3 0 0 1 0 0 0 0
........................................TCTCTTTGTACATTCAAACCATTTA...................................................................................... 25 0 1 4.00 4 0 0 0 0 1 0 3 0 0 0
.........CGTGACCGCAGTGATTGTGAAACTATGT.................................................................................................................. 28 0 1 4.00 4 2 0 0 0 1 1 0 0 0 0
.................................................ACATTCAAACCATTTAAAATATGCC............................................................................. 25 0 6 4.00 24 0 0 0 24 0 0 0 0 0 0
............GACCGCAGTGATTGTGAAACTATGTCG................................................................................................................ 27 0 2 3.50 7 1 1 4 0 1 0 0 0 0 0
............GACCGCAGTGATTGTGAAACTATGT.................................................................................................................. 25 0 3 3.33 10 2 0 2 0 6 0 0 0 0 0
............GACCGCAGTGATTGTGAAACTATGTCGC............................................................................................................... 28 0 2 3.00 6 2 0 4 0 0 0 0 0 0 0
...........TGACCGCAGTGATTGTGAAACTATGT.................................................................................................................. 26 0 3 2.67 8 0 0 5 0 1 1 0 0 1 0
........TCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 24 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0
......................................................CAAACCATTTAAAATATGCC............................................................................. 20 0 7 2.00 14 0 0 0 14 0 0 0 0 0 0
...AAAAGGCGTGACCGCACTGATTGTGAAA........................................................................................................................ 28 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....AAGGCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........CGTGACCGCAGTGATTGTGAAACT...................................................................................................................... 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.....AAGCCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.................................................................................................AGTCTAATATCTTTTCTTTTTTTACTT........................... 27 3 1 2.00 2 1 0 1 0 0 0 0 0 0 0
......AGCCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................CTTTGTACATTCAAACCATTTAAA.................................................................................... 24 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0
......................................................CAAACCATTTAAAATATGCCTTACC........................................................................ 25 0 7 2.00 14 0 0 0 14 0 0 0 0 0 0
.........CGTGACCGCAGTGATTGTGAAACTAT.................................................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0
..................................................CATTCAAACCATTTAAAATATGCCTT........................................................................... 26 0 6 2.00 12 0 0 0 12 0 0 0 0 0 0
..............CCGCAGTGATTGTGAAACTATGTCGC............................................................................................................... 26 0 4 1.75 7 2 0 1 0 0 0 3 0 0 1
......AGGCGTGACCGCAGTGATTGTGAAACTA..................................................................................................................... 28 1 6 1.50 9 5 0 2 0 0 2 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAAACTAT.................................................................................................................... 29 1 6 1.50 9 7 0 1 0 0 1 0 0 0 0
...................................................................ATATGCCTTACCTTTAATAT................................................................ 20 0 8 1.13 9 1 0 0 0 0 0 0 8 0 0
.CAAAAAGCCGTGACCGCAGTGATTGTGA.......................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....AAGCCGTGACCGCAGTGATTGTGAAACT...................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................TTGTGAAACTATGTCGCTCTCTTTGT...................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................ATCTCTTTGTACATTCAAACCATTTA...................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................GTGAAACTATGTCGCTCTCTTTGT...................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......GCCGTGACCGCAGTGATTGT............................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................AAAGTCTAATATCTTTTCTTTTTTTACT............................ 28 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................GTACATTCAAACCATTTAAA.................................................................................... 20 0 6 1.00 6 0 0 0 6 0 0 0 0 0 0
.....AAGCCGTGACCGCAGTGATTGTGA.......................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......GGCGTGACCGCAGTGATTGTGAAACT...................................................................................................................... 26 1 6 1.00 6 3 1 2 0 0 0 0 0 0 0
CCAAAAAGCCGTGACCGCAGTGAT............................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................AAGTCTAATATCTTTTCTTTTTTTACT............................ 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................ATGTCGCTCTCTTTGTACATTCAAA............................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................................................ACATTCAAACCATTTAAAATATGCCTT........................................................................... 27 0 6 1.00 6 0 0 0 6 0 0 0 0 0 0
.....................................................TCAAACCATTTAAAATATGCC............................................................................. 21 0 7 1.00 7 0 0 0 7 0 0 0 0 0 0
.......................................................................................TAAAAGAAAAAGTCTAATAT............................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................CATTCAAACCATTTAAAATATGCCTTA.......................................................................... 27 0 6 1.00 6 0 0 0 6 0 0 0 0 0 0
........CCGTGACCGCAGTGATTGT............................................................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................................TTAATATTAAAAGAAAAAGTCTAAT.............................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................TACATTCAAACCATTTAAA.................................................................................... 19 0 7 0.86 6 0 0 0 6 0 0 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAAACTATGT.................................................................................................................. 31 1 6 0.83 5 2 1 2 0 0 0 0 0 0 0
..................AGTGATTGTGAAACTATGTCGCTCTCT.......................................................................................................... 27 0 4 0.75 3 0 1 0 0 0 2 0 0 0 0
..............CCGCAGTGATTGTGAAACTATGTCGCT.............................................................................................................. 27 0 4 0.75 3 0 0 2 0 0 0 1 0 0 0
..................AGTGATTGTGAAACTATGTCGCTCT............................................................................................................ 25 0 4 0.75 3 0 1 1 0 0 1 0 0 0 0
..........GTGACCGCAGTGATTGTGAAACTATGT.................................................................................................................. 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.......GGCGTGACCGCAGTGATTGTGA.......................................................................................................................... 22 1 6 0.50 3 0 2 0 0 0 1 0 0 0 0
.............ACCGCAGTGATTGTGAAACTATGTCG................................................................................................................ 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0
........GCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 24 1 6 0.50 3 1 0 2 0 0 0 0 0 0 0
............................................................................................................TTTTTTTATTTTATTTTTTTTGAT................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........TGACCGCAGTGATTGTGAAACTAT.................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAA......................................................................................................................... 24 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...........TGACCGCAGTGATTGTGAAAC....................................................................................................................... 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
...........TGACCGCAGTGATTG............................................................................................................................. 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
................GCAGTGATTGTGAAACTATGTCGCT.............................................................................................................. 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
...............CGCAGTGATTGTGAAACTATGTCGCTC............................................................................................................. 27 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0
................GCACTGATTGTGAAACTATGTCGC............................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...............CGCAGTGATTGTGAAACTATGTCGCT.............................................................................................................. 26 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0
..................AGTGATTATGAAACTATGTCGC............................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................ATATCTTGTTTTATTTTATT............................ 20 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
................GCAGTGATTGTGAAACTATGT.................................................................................................................. 21 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................AAAGTCTAATATCTTTTCTTTTTTT............................... 25 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...............CGCAGTGATTGTGAAA........................................................................................................................ 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......AGGCGTGACCGCAGTGATTGTCAAACT...................................................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
......TGGCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 26 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.......GGCGTGACCGCACTGATTGTGAAACTAT.................................................................................................................... 28 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0
......AGGCGTGACCGCAGTGATTGT............................................................................................................................ 21 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0
........GCGTGACCGCAGTGATTGTGA.......................................................................................................................... 21 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0
......AGGCGTGACCGCAGTGATTTTGAAACT...................................................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAAAT....................................................................................................................... 26 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
......AGGCGTGACCGCAGTGATTGTGAAACA...................................................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....CAGGCGTGACCGCAGTGATTGTGA.......................................................................................................................... 24 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
......AGGCGTGACCGCACTGATTGTGAAACT...................................................................................................................... 27 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
......AGGCGTGACCGCACTGATTGTGA.......................................................................................................................... 23 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......AGCGTGACCGCAGTGATTGTGAAAC....................................................................................................................... 25 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
..........................TGAAACTATGTCGCTCT............................................................................................................ 17 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0
.......GGCGTGACCGCAGTTATTGTGAAACT...................................................................................................................... 26 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
......AGGCGTGACCTCAGTGATTGTGAAAC....................................................................................................................... 26 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
.................................................................AAATATGCCTTACCTTTAATAT................................................................ 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
....................TGATTGTGAAACTATCT.................................................................................................................. 17 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0
............................................................ATTTAAAATATGCCTTACCTTTAA................................................................... 24 0 8 0.13 1 0 0 0 0 0 0 0 0 0 1
................................................................ATAAAATGCCTTACCTTTAAT.................................................................. 21 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATTTTTTATTTTATGTTTTTTT..................... 24 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TCTTATCTTTTTATATTTTATTTTTT........................ 26 3 16 0.06 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................TTTTTTTCTTTCATTTTTTTTTAT................... 24 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_50677:15663-15813 + dsi_25340 GGTTTTTCGGCACTGGCGTCACTAACACTTTGATACAGCGA----GAGAAACATGTAAGT------------TTGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------TA---TAATTTT--------CTTT-----TTCAGATTATAGAAAAAAATAAAATAAAAAAAAATAACTATTTGAGAAGA-TTGC-------------T
droSec2 scaffold_112:67944-68076 - GGTTTTTCGGCACTGGCGTCACTAACACTTTGATACAGCGA----GAGAAACATGTAAGT------------TTGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------T------ATTTT--------CTTT-----TTCAGATTATAG---------------AAAAAAATAACTATTTGATAAGA-TTGG-------------T
dm3 chr3RHet:562701-562789 + AATTTTTTATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TTGATTT--------TACT-----TATAAATCAAAA---------------AAAAAAAAAAT-----TAAAAATATTAATTATACAAGAAAAT
droEre2 scaffold_4690:17886947-17887094 + AACTTTTCAACGA--ATCTAGTATACCCTTTTACTCTACGA----GTAACGGATATAAAAACCGTTAC----TCAGCAAGTGGAAGTGGG---------------AACG-AAAAA-------------------------------TGT---CAATTTTTTTTTG--TTATATCGGTAGAAATTTTGAAAAACAA---------------------TAATACAAAA-AAAA-------------A
droYak3 v2_chr2L_random_001:449169-449301 - GGTTTCTTCCCACTAACACC---AACAATACAATACAGAGA----GATGGACAAGTAAGT-------------TGTTCAATTTTATATGG---------------AATTAGAAA--------------------------------TTT---TAGTTTT--------CTTT-----TTCAGATTACAG---------------AAAAACA-AACAATTATACAAGTTTTGG-------------T
droBia1 scf7180000301908:19391-19518 - GTTTTTGTGCTGTCACTATC---AAGAAAA--------CAAGCAAAGAAGACGT-----------ACGTAAATGAGCAGATTTTGT----------------------------------------TATTTTTGA-----AA----TATATT---ATTAAAGTTATTCTTT-----TGCA----GGAA---------------TAA-----AACAATCGATTAGTG-GTGC-------------A
droTak1 scf7180000415517:1745-1828 + AAA----------------------------------------------AACATGAAA---------------TATTAAATTTTTTTTAA----------------------AA--------------------------------CTT---TAATTTT--------ATTT-----TTTTAGTTTTTAAAAATGA----------------AAACATAAAAAAAGA-AACT-------------A
droEle1 scf7180000487202:10896-10902 + TGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000775058:816-994 + CATACTTTTGCACGAATACAATATACCCTTTTACTCTACGA----GTAACGGGTATAAAA---------------ATAGATAACTTATCAGAAAATAGTATACAAAATA-CAGATTTAAATATGATTATTGATGTTATAAATAATGGTA---TCGAAGT--------AATT-----AATAAGTTAAAA---------------GAA--GATGACG---AAAGAGAA-GAAC---------AAGCT
droFic1 scf7180000453205:8310-8436 - TGTTTTC-ATTAA---------------TTCTGTGCATTGA----GGACAACGTGTAAGT------------AAAATGGGTTTTGTGTCGCATTATTTTAATTAT----------------------------ATTAA-----------ATA---------TTTA----AT-----TACATGTAGTGA---------------AAATATAAATTCCTTGGAAGCAA-GTGG-------------T
droKik1 scf7180000298560:27174-27242 + GTTTTTTCATCTCTAATT---------------CACAAGAAAAAAGAAACGCTAGAGAGA--GGTACGTAGCTCGGAAAATTTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13248:4759249-4759365 - TGTTTATCATCTCTAACG---------------AGCATCAAGCAGGGAAGACGTGAAAAT--TGTA--------AGTAGATTT-AAATTAAGT---------------------------------TATTTCTGATAA-----------ATT---------ACTA----AT-----GTTATGTTGC-----------------------A-AACT--AGTGTTCTG-TTGG-------------T
droBip1 scf7180000395185:32731-32857 - TGTTTTC-ATTAA---------------TTCTGTGCATTGA----GGGCAACGTGTAAGT------------AAAATGGGTTTTGTGGTGCATTATTTTAATTAT----------------------------ATTAA-----------ATA---------TTTA----AT-----CACATGTAGTGA---------------AAATTTGAATACCTCGCAAGCAA-GTGG-------------C
droPer2 scaffold_84:60648-60679 - AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA-------------TAAAATAAAAAAATATGG-CTGT-------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGTTTTTCGGCACTGGCGTCACTAACACTTTGATACAGCGA----GAGAAACATGTAAGT------------TTGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------TA---TAATTTT--------CTTT-----TTCAGATTATAGAAAAAAATAAAATAAAAAAAAATAACTATTTGAGAAGA-TTGC-------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................CACTAACACTTTGATACAGCGA----GAGA....................................................................................................................................................................................................26433.5013400000010003130000000
...................CACTAACACTTTGATACAGCGA----GAG.....................................................................................................................................................................................................25422.25890000006641900000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................26821.0016800000001474152000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAA....................................................................................................................................24816.881350000800845361001000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---TAATTTT--------C.............................................................................27116.0016000000140200000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAA...................................................................................................................................25814.251140001000642460001000
...................CACTAACACTTTGATACAGCGA----GA......................................................................................................................................................................................................24411.00440000002821400000000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---TAATTT.......................................................................................25111.001100000070400000000
...................CACTAACACTTTGATACAGCGA----G.......................................................................................................................................................................................................2349.5038000000321500000000
......................TAACACTTTGATACAGCGA----GAGAAACA................................................................................................................................................................................................2718.00800000071000000000
.............TGGCGTCACTAACACTTTGATACAGC..............................................................................................................................................................................................................2625.501100000015230000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GA.....................................................................................................................................2585.25420000000240011025000
...................CACTAACACTTTGATACAGCGA----GAGAAACA................................................................................................................................................................................................3015.00500000030200000000
..................TCACTAACACTTTGATACAGCGA----GA......................................................................................................................................................................................................2544.7519000000301600000000
..................TCACTAACACTTTGATACAGCGA----G.......................................................................................................................................................................................................2444.5018000000101700000000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---TAATT........................................................................................2414.00400000020200000000
......................TAACACTTTGATACAGCGA----GAGA....................................................................................................................................................................................................2363.8323000000941000000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAA....................................................................................................................................2683.3827000000015009003000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GA.....................................................................................................................................2383.3827000000019071000000
.......................................................TAAGT------------TTGGTAAATTTTATACGG---------------AA..........................................................................................................................................2572.431700000044810000000
.....................................................TGTAAGT------------TTGGTAAATTTTATACGG---------------AA..........................................................................................................................................2762.331400000081410000000
.............TGGCGTCACTAACACTTTGATACAGCGA----........................................................................................................................................................................................................2822.00400000022000000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAAA...................................................................................................................................2781.881500000004106004000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-G......................................................................................................................................2481.501200000003008010000
..................TCACTAACACTTTGATAC.................................................................................................................................................................................................................1861.33800008000000000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2881.251000000004202011000
..................TCACTAACACTTTGATACAGCGA----GAGA....................................................................................................................................................................................................2741.25500000010400000000
..............................................................................AATTTTATACGG---------------AATG-GAAA...................................................................................................................................2081.13900000800001000000
........................................................................................................................................................................................................TAAAAAAAAATAACTATTTGAGAAGA-..................2611.00100000000100000000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---.............................................................................................1981.00800008000000000000
......................TAACACTTTGATACAGCGA----GAG.....................................................................................................................................................................................................2261.00600006000000000000
......................TAACACTTTGATACAGCGA----GAGAAA..................................................................................................................................................................................................2511.00100000010000000000
................................................................................TTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................1981.00800000800000000000
.............................TTGATACAGCGA----GAGAAACATGTA............................................................................................................................................................................................2411.00100000000100000000
...TTTTCGGCACTGGCGTCACTAACAC.........................................................................................................................................................................................................................2511.00100000001000000000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---TAA..........................................................................................2211.00100000000000001000
................................................................................................................................................................................TTCAGATTATAGAAAAAAATAAAATA...........................................2611.00100000010000000000
................................................................................TTTTATACGG---------------AATG-GAAAT--------------------------------TA---TA...........................................................................................2381.00800008000000000000
...........................................................................................................TG-GAAAT--------------------------------TA---TAATTTT--------CTTT-----TTCAGA...............................................................2611.00100000000100000000
.............TGGCGTCACTAACACTTTGATACAGCG.............................................................................................................................................................................................................2721.00200000000200000000
........................................................................................................................................................................TTT-----TTCAGATTATAGAAAAAAATAAC..............................................2611.00100000000100000000
......................TAACACTTTGATACAGCGA----........................................................................................................................................................................................................1961.00600006000000000000
...................................................................................................................................................................................................TAAAATAAAAAAAAATAACTATTTGAGA......................2811.00100000000100000000
......................TAACACTTTGATACAGCGA----GAGAAAC.................................................................................................................................................................................................2611.00100000010000000000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---TAATTTT--------..............................................................................2611.00100000010000000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAAA--------------------------------..................................................................................................2680.75600000002020002000
..................TCACTAACACTTTGATACAGCGA----GAG.....................................................................................................................................................................................................2640.75300000000300000000
...................CACTAACACTTTGATACAGC..............................................................................................................................................................................................................2040.50200000010100000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------TA---.............................................................................................2880.50400000010120000000
.....................CTAACACTTTGATACAGCGA----GAGA....................................................................................................................................................................................................2440.50200000011000000000
.............TGGCGTCACTAACACTTTGATACAGCGA----GA......................................................................................................................................................................................................3020.50100000000100000000
................CGTCACTAACACTTTGATACAGCGA----GAGA....................................................................................................................................................................................................2940.50200000011000000000
.................................................................................TTTATACGG---------------AATG-GA.....................................................................................................................................1580.38300000000003000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAAC...................................................................................................................................2780.38300000000003000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GT.....................................................................................................................................2580.38300000000001002000
...........ACTGGCGTCACTAACACTTTGATACT................................................................................................................................................................................................................2630.33100000000001000000
.............TGGCGTCACTAACACTTTGATA..................................................................................................................................................................................................................2230.33100000001000000000
.............TGGCGTCACTAACACTTTGATACAG...............................................................................................................................................................................................................2530.33100000001000000000
...................CACTAACACTTTGATACAGCGA----GAGAT...................................................................................................................................................................................................2740.25100000010000000000
...................CACTAACACTTTGATACAGCGA----GAT.....................................................................................................................................................................................................2540.25100000010000000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAAT...................................................................................................................................2780.25200000000001010000
.................................................................................TTTATACGG---------------AATG-GAAA...................................................................................................................................1780.25200000000002000000
..................................................................................TTATACGG---------------AATG-GAA....................................................................................................................................1580.25200000000002000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAT...................................................................................................................................2580.25200000002000000000
...................CACTAACACTTTGATACAGCG.............................................................................................................................................................................................................2140.25100000000100000000
..............................................................................AATTTTATACGG---------------AATG-GA.....................................................................................................................................1880.25200000000002000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAC....................................................................................................................................2480.25200000000110000000
....................ACTAACACTTTGATACAGCGA----GA......................................................................................................................................................................................................2340.25100000010000000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAC...................................................................................................................................2580.25200000002000000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GTT....................................................................................................................................2680.25200000000001010000
...............................................................................ATTTTATACGG---------------AATG-GAA....................................................................................................................................1880.25200000000002000000
........................................................................TTGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2780.25200000001100000000
...........................................................T------------TTGGTAAATTTTATACG............................................................................................................................................................1880.25200000000002000000
.....................CTAACACTTTGATACAGCGA----GAG.....................................................................................................................................................................................................2340.25101000000000000000
.....................................................TGTAAGT------------TTGGTAAATTTTATACGG---------------A...........................................................................................................................................2660.17100000010000000000
...................CACTAACACTTTGATACAA...............................................................................................................................................................................................................1960.17100000000100000000
.....................................................TGTAAGT------------TTGGTAAATTTTATACGG---------------AT..........................................................................................................................................2760.17100000010000000000
......................TAACACTTTGATACAGCGA----G.......................................................................................................................................................................................................2060.17100000000010000000
..........................................................GT------------TTGGTAAATTTTATACGG---------------AATG-.......................................................................................................................................2470.14100000000001000000
..........................................................GT------------TTGGTAAATTTTATACGG---------------AATG-GA.....................................................................................................................................2670.14100000000001000000
.........................................................................................................................................................................TT-----TTCAGATTATAGAAAA.....................................................1870.14100000000100000000
........................................................AAGT------------TTGGTAAATTTTATACGG---------------AA..........................................................................................................................................2470.14100000000100000000
..........................................................GT------------TTGGTAAATTTTATACGG---------------AAT.........................................................................................................................................2370.14100000000001000000
.....................................................TGTAAGT------------TTGGTAAATT...................................................................................................................................................................1770.14100000010000000000
........................................................................TTGGTAAATTTTATACGG---------------AATG-GT.....................................................................................................................................2480.13100000000001000000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------TA---TA...........................................................................................2180.13100000000100000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-.......................................................................................................................................2380.13100000000000001000
..................................................................................TTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................1780.13100000010000000000
................................................................................TTTTATACGG---------------AATG-GA.....................................................................................................................................1680.13100000000001000000
................................................................................TTTTATACGG---------------AATG-G......................................................................................................................................1580.13100000000001000000
............................................................................................................................................................TTT--------CTTT-----TTCAGATTATAGA........................................................2080.13100000000001000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAT....................................................................................................................................2680.13100000001000000000
.................................................................................TTTATACGG---------------AATG-GAA....................................................................................................................................1680.13100000000001000000
........................................................................TTGGTAAATTTTATACGG---------------AATG-GAAA...................................................................................................................................2680.13100000000000010000
..................................................................................TTATACGG---------------AATG-GAAA...................................................................................................................................1680.13100000000100000000
...............................................................................ATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2080.13100000000001000000
..........................................................................GGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2580.13100000001000000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-G......................................................................................................................................2280.13100000001000000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAC....................................................................................................................................2680.13100000000000001000
..........................................................................GGTAAATTTTATACGG---------------AATG-GA.....................................................................................................................................2280.13100000000001000000
............................................................................TAAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2380.13100000001000000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------A.................................................................................................2780.13100000000000010000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GATT...................................................................................................................................2780.13100000000001000000
................................................................................TTTTATACGG---------------AATG-GAA....................................................................................................................................1780.13100000000001000000
.................................................................................TTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................1880.13100000000001000000
................................................................................TTTTATACGG---------------AATG-GAAA...................................................................................................................................1880.13100000000001000000
............................................................................................................................................................TTT--------CTTT-----TTCAGATTATAGAAA......................................................2280.13100000000001000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GC.....................................................................................................................................2580.13100000000001000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AA..........................................................................................................................................2180.13100000000000001000
.............................................................................AAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2280.13100000001000000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-GACT...................................................................................................................................2580.13100000000010000000
....................................................................................ATACGG---------------AATG-GAAAT--------------------------------..................................................................................................1580.13100000000001000000
...........................................................T------------TTGGTAAATTTTATACGG---------------AATG-GAAAA--------------------------------..................................................................................................2880.13100000000000001000
........................................................................TTGGTAAATTTTATACGG---------------AA..........................................................................................................................................2090.11100100000000000000
.........................................................................TGGTAAATTTTATACGG---------------AATG-.......................................................................................................................................2190.11100000000001000000
...........................................................................GTAAATTTTATACGG---------------............................................................................................................................................1590.11100000001000000000
.............................................................................................................................................................TT--------CTTT-----TTCAGATTATAGA........................................................1990.11100000000010000000
.........................................................................................................................................................................TT-----TTCAGATTATAGAA.......................................................1690.11100000000001000000
..............................................................................AATTTTATACGG---------------AATG-.......................................................................................................................................16100.10100000000001000000
.................................................................................TTTATACGG---------------AATG-GC.....................................................................................................................................15110.09100000000001000000
............................................................................................................................................................................................AAAAAAATAAAATAAAAAA......................................19200.05100000000000001000
droSec2
GGTTTTTCGGCACTGGCGTCACTAACACTTTGATACAGCGA----GAGAAACATGTAAGT------------TTGGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------T------ATTTT--------CTTT-----TTCAGATTATAG---------------AAAAAAATAACTATTTGATAAGA-TTGG-------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................GGTAAATTTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................2540.2510001
.................................................................................TTTATACGG---------------AATG-GAAAT--------------------------------..................................................................................................1840.2510001
dm3
AATTTTTTATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TTGATTT--------TACT-----TATAAATCAAAA---------------AAAAAAAAAAT-----TAAAAATATTAATTATACAAGAAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------AAAAAAAAT.................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------AAAAAAAAAAT-----..........................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------AAAAAAAA..................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............A--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TT...........................................................................................19201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTAAACA--------------------------------ATA---TTGATTT--------TACT-----TATAAATC.............................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------AAAAAAAAAA................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TTGATTT--------TACT-----.....................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TTGAT........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------AAAAAAAAA.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TAAAAATATTAATTATACAAGA....2260.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TAAAAATATTAATTATACAAGAAAA.2560.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TT...........................................................................................24200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---TT...........................................................................................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000620001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................A---------------AAAAAAAAAAT-----TAAAAATAT.................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................T-----TAAAAATATTAATTATACAAGAAAA.2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATAAATCAAAA---------------AAAAAAAA..................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------A.........................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------...................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AAAA---------------AAAAAAAAAAT-----TAAA......................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TAAATCAAAA---------------AAAAAAAA..................................18180.0610000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AAAA---------------AAAAAAAAAAT-----TAAAAA....................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---.............................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTTTATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---.............................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---T............................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTTTATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------ATA---.............................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TTT--------TACT-----TATAAATCAAAA---------------AA........................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------TACT-----TATAAATCAAAA---------------AG........................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATAAA--ATATAA--------------------------------------------------------------------------------------TTAAACA--------------------------------AT.................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AACTTTTCAACGA--ATCTAGTATACCCTTTTACTCTACGA----GTAACGGATATAAAAACCGTTAC----TCAGCAAGTGGAAGTGGG---------------AACG-AAAAA-------------------------------TGT---CAATTTTTTTTTG--TTATATCGGTAGAAATTTTGAAAAACAA---------------------TAATACAAAA-AAAA-------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....TTTCAACGA--ATCTAGTATACCCTT.......................................................................................................................................................................................................................24200.1530000003
droYak3
GGTTTCTTCCCACTAACACC---AACAATACAATACAGAGA----GATGGACAAGTAAGT-------------TGTTCAATTTTATATGG---------------AATTAGAAA--------------------------------TTT---TAGTTTT--------CTTT-----TTCAGATTACAG---------------AAAAACA-AACAATTATACAAGTTTTGG-------------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droBia1
GTTTTTGTGCTGTCACTATC---AAGAAAA--------CAAGCAAAGAAGACGT-----------ACGTAAATGAGCAGATTTTGT----------------------------------------TATTTTTGA-----AA----TATATT---ATTAAAGTTATTCTTT-----TGCA----GGAA---------------TAA-----AACAATCGATTAGTG-GTGC-------------ASizeHit CountTotal NormTotal
No Reads
droTak1
AAA----------------------------------------------AACATGAAA---------------TATTAAATTTTTTTTAA----------------------AA--------------------------------CTT---TAATTTT--------ATTT-----TTTTAGTTTTTAAAAATGA----------------AAACATAAAAAAAGA-AACT-------------ASizeHit CountTotal NormTotal
No Reads
droEle1
TGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CATACTTTTGCACGAATACAATATACCCTTTTACTCTACGA----GTAACGGGTATAAAA---------------ATAGATAACTTATCAGAAAATAGTATACAAAATA-CAGATTTAAATATGATTATTGATGTTATAAATAATGGTA---TCGAAGT--------AATT-----AATAAGTTAAAA---------------GAA--GATGACG---AAAGAGAA-GAAC---------AAGCTSizeHit CountTotal NormTotal
No Reads
droFic1
TGTTTTC-ATTAA---------------TTCTGTGCATTGA----GGACAACGTGTAAGT------------AAAATGGGTTTTGTGTCGCATTATTTTAATTAT----------------------------ATTAA-----------ATA---------TTTA----AT-----TACATGTAGTGA---------------AAATATAAATTCCTTGGAAGCAA-GTGG-------------TSizeHit CountTotal NormTotal
No Reads
droKik1
GTTTTTTCATCTCTAATT---------------CACAAGAAAAAAGAAACGCTAGAGAGA--GGTACGTAGCTCGGAAAATTTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TGTTTATCATCTCTAACG---------------AGCATCAAGCAGGGAAGACGTGAAAAT--TGTA--------AGTAGATTT-AAATTAAGT---------------------------------TATTTCTGATAA-----------ATT---------ACTA----AT-----GTTATGTTGC-----------------------A-AACT--AGTGTTCTG-TTGG-------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................GCATCAAGCAGGGAAGACGTGA.............................................................................................................................................................................................22412.254932142010
..................................GCATCAAGCAGGGAAGACGTGAAAAT--.......................................................................................................................................................................................2645.25211470000
..................................GCATCAAGCAGGGAAGACGTGAA............................................................................................................................................................................................2343.25131210000
..................................GCATCAAGCAGGGAAGACGTGAAAAT--T......................................................................................................................................................................................2741.757510010
..................................GCATCAAGCAGGGAAGACGTGAAA...........................................................................................................................................................................................2441.757340000
..................................GCATCAAGCAGGGAAGACGTG..............................................................................................................................................................................................2141.757700000
......................................CAAGCAGGGAAGACGTGAAAAT--TTG....................................................................................................................................................................................2541.255500000
..................................GCATCAAGCAGGGAAGACG................................................................................................................................................................................................1941.004120010
..........................................................................................................................................................................T-----GTTATGTTGC-----------------------A-AACT--AGTGTTCTG-T.................2631.003030000
..................................GCATCAAGCAGGGAAGACGTGAAAA..........................................................................................................................................................................................2540.753300000
.........TCTCTAACG---------------AGCATCAAGCAGGGAAGA..................................................................................................................................................................................................2740.753120000
......................................CAAGCAGGGAAGACGTGAAAAT--T......................................................................................................................................................................................2340.753111000
....TATCATCTCTAACG---------------AGCATCAAGCAGG.......................................................................................................................................................................................................2740.753030000
..................................GCATCAAGCAGGGAAGACGTGAAAAT--TG.....................................................................................................................................................................................2840.502200000
......TCATCTCTAACG---------------AGCATCAAGCAGG.......................................................................................................................................................................................................2540.502200000
.....ATCATCTCTAACG---------------AGCATCAAGCAG........................................................................................................................................................................................................2540.502200000
................CG---------------AGCATCAAGCAGGGAAGACGTGA.............................................................................................................................................................................................2540.502200000
................CG---------------AGCATCAAGCAGGGAAGACG................................................................................................................................................................................................2240.502200000
.................................................................................................................................................................................TTATGTTGC-----------------------A-AACT--AGTGTTCTG-..................2330.331010000
..........................................................................................................................................................................T-----GTTATGTTGC-----------------------A-AACT--AGTGTTCTG-TTGG-------------.2930.331100000
................................................................................................................................................................................GTTATGTTGC-----------------------A-AACT--AGTGTTCTG-C.................2530.331010000
.................................................................................................................................TTCTGATAA-----------ATT---------ACTA----AT-----GTTATGTTGC-----------------------....................................2830.331010000
.........................................................................................................................................................................AT-----GTTATGTTGC-----------------------A-AACT--AGTGTTC.....................2430.331010000
....................................................................................................................................TGATAA-----------ATT---------ACTA----AT-----GTTATGTTGC-----------------------A-AAC...............................2930.331010000
..................................................................................................................................................................................TATGTTGC-----------------------A-AACT--AGTGTTCT....................2130.331010000
.................................................................................................................................................................................TTATGTTGC-----------------------A-AACT--AGTGTTCTG-TTGG-------------.2730.331100000
.................................................................................................................................TTCTGATAA-----------ATT---------ACTA----AT-----GTTATGT..............................................................2530.331001000
....................................................................................................................................................................................TGTTGC-----------------------A-AACT--AGTGTTCTG-TTGG-------------.2430.331000001
.................................................................................................................................................................................TTATGTTGC-----------------------A-AACT--AGTGTTCT....................2230.331010000
.................................................................................................................................................................................TTATGTTGC-----------------------A-AACT--AGTGTTCTG-C.................2430.331010000
.................................................................................................................................................................................TTATGTTGC-----------------------A-AACT--AGTGTTCTG-T.................2430.331100000
......................................................................................................................................................................................TTGC-----------------------A-AACT--AGTGTTCTG-TTGG-------------.2230.331001000
................CG---------------AGCATCAAGCAGGGAAGA..................................................................................................................................................................................................2040.251010000
.........................................................AAT--TGTA--------AGTAGATTT-AAATTAAG.........................................................................................................................................................2440.251000100
..............AACG---------------AGCATCAAGCAGGGAAGAC.................................................................................................................................................................................................2340.251010000
..................................................................................T-AAATTAAGT---------------------------------TATTTCTGATAA-----------ATT---------AC..................................................................................2740.251010000
.................................AGCATCAAGCAGGGAAGACGTG..............................................................................................................................................................................................2240.251100000
.....ATCATCTCTAACG---------------AGCATCAAGCAGG.......................................................................................................................................................................................................2640.251100000
..............AACG---------------AGCATCAAGCAGGGAAGACGTGA.............................................................................................................................................................................................2740.251010000
............CTAACG---------------AGCATCAAGCAGGGAAGA..................................................................................................................................................................................................2440.251010000
.............TAACG---------------AGCATCAAGCAGGGAAGAC.................................................................................................................................................................................................2440.251001000
..................................GCATCAAGCAGGGAAGACGTGAAT...........................................................................................................................................................................................2440.251100000
..............AACG---------------AGCATCAAGCAGGGA.....................................................................................................................................................................................................1940.251010000
..................................................................................T-AAATTAAGT---------------------------------TATTTCTGAT.............................................................................................................2040.251010000
......................................CAAGCAGGGAAGACGTGAAAAT--TGTG--------TC.........................................................................................................................................................................2840.251000010
.......................................AAGCAGGGAAGACGTGAAAAT--TTGT--------...........................................................................................................................................................................2540.251100000
......................................CAAGCAGGGAAGACGTGAAAAT--TTGC--------...........................................................................................................................................................................2640.251010000
.......................................AAGCAGGGAAGACGTGAAAAT--.......................................................................................................................................................................................2140.251100000
.......CATCTCTAACG---------------AGCATCAAGCAGG.......................................................................................................................................................................................................2440.251010000
..................................GCATCAAGCAGGGAAGACGC...............................................................................................................................................................................................2040.251010000
..................................GCATCAAGCAGGGAAGACGTGTT............................................................................................................................................................................................2340.251010000
.........TCTCTAACG---------------AGCATCAAGCAGGGAAG...................................................................................................................................................................................................2640.251100000
...................................CATCAAGCAGGGAAGACGTGAAAAT--TG.....................................................................................................................................................................................2740.251100000
..................................GCATCAAGCAGGGAAGACGTGAC............................................................................................................................................................................................2340.251010000
.......................................AAGCAGGGAAGACGTGAAAAT--TTG....................................................................................................................................................................................2440.251100000
......................................CAAGCAGGGAAGACGTGAAAAT--TG.....................................................................................................................................................................................2440.251100000
......................................CAAGCAGGGAAGACGTGAAAAT--TGT....................................................................................................................................................................................2540.251001000
............CTAACG---------------AGCATCAAGCAGGGAATT..................................................................................................................................................................................................2440.251100000
droBip1
TGTTTTC-ATTAA---------------TTCTGTGCATTGA----GGGCAACGTGTAAGT------------AAAATGGGTTTTGTGGTGCATTATTTTAATTAT----------------------------ATTAA-----------ATA---------TTTA----AT-----CACATGTAGTGA---------------AAATTTGAATACCTCGCAAGCAA-GTGG-------------CSizeHit CountTotal NormTotal
No Reads
droPer2
AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA-------------TAAAATAAAAAAATATGG-CTGT-------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/19/2015 at 05:43 AM